Changeset 4955 for BOL/LMDZ_Setup_amaury/lmdz_env.sh

Timestamp:

May 30, 2024, 2:36:54 PM (5 months ago)

Author:

abarral

Message:

(WIP) continue refactoring setup.sh

File:

• BOL/LMDZ_Setup_amaury/lmdz_env.sh (modified) (2 diffs)

BOL/LMDZ_Setup_amaury/lmdz_env.sh

@@ -7 +7 @@
 echo "Setting up lmdz_env on $hostname"
 
+# Platform-specific
 case ${hostname:0:5} in
   jean-)
@@ -27 +28 @@
     #   idrproj -d newproj   redefinit "newproj" en tant que  projet actif,
     #        alors $STORE, $WORK etc vont designer les espaces de "newproj")
-    groupe=$(idrproj | grep active | awk '{ print $1}')
-    submit="sbatch -A ${groupe}@cpu "
-    run="srun --label -n "
+    GROUPE=$(idrproj | grep active | awk '{ print $1}')
+    SUBMITCMD="sbatch -A $GROUPE@cpu "
+    RUNCMD="srun --label -n"
     # Espaces suivants definis par defaut en fonction du groupe actif,
     #  par exemple : SCRATCHD=$SCRATCH is /gpfsstore/rech/$groupe/$login
                 #    * On peut aussi ne pas installer les scripts a la racine de STORE,
                 #        mais dans STORED=$STORE/your_folder
-    STORED=$STORE
-    SCRATCHD=$SCRATCH
+    SIMRESDIR=$STORE
+    SIMRUNTOPDIR="$SCRATCH/LMDZ_Setup"
     LMDZD=$WORK
     NB_MPI_MAX=2000
     NB_OMP_MAX=20
     #LMDZ_Init sur le $STORE du $groupe
-    LMDZ_Init=$STORE/LMDZ_Init ;;
+    LMDZ_INIT=$STORE/LMDZ_Init
+
+    JOB_HEADER="#SBATCH -A $groupe@cpu
+    #@TESTQ#SBATCH --qos=qos_cpu-dev"
+
+    ;;
   *)  # TODO mettre clairement dans ce paragraphe une doc de chaque param
     ARCH="local-gfortran-parallel"
 #    submit=". "
 #    run="mpirun -np "
-#    SCRATCHD="/tmp/SCRATCH"
-#    STORED=~"/TMP/"
-    LMDZD="./LMDZD"
-    NB_MPI_MAX=999999
-    NB_OMP_MAX=999999
-#    LMDZ_Init=~"/LMDZ/LMDZ_Init"
+    SIMRUNTOPDIR="/tmp/SCRATCH/LMDZ_Setup/"  # Where the simulations will be executed  # TODO Change name if it's actually the SIMRUNDIR
+    SIMRESDIR=~"/TMP/LMDZ_Setup"  # Where to store the relevant outputs of the simulations
+    LMDZD="$(pwd)/LMDZD"  # Where the sources will be downloaded and compiled
+    LMDZ_INIT="$(pwd)/LMDZ_Init"  # Where to store shared files used for initialisation
+    NB_MPI_MAX=999999  # Max number of MPI cores
+    NB_OMP_MAX=999999  # Max number of OMP threads
+    GROUPE=""  # the group to execute the job as
+    RUNCMD="mpirun -n" # command to run a job, as $runcmd <nprocs> <script>
+    SUBMITCMD="mpirun"  # command to sumbit a job, as $submitcmd <script>
 esac