Changeset 4152 for trunk/LMDZ.COMMON/libf/evolution/deftank/pem_workflow_lib.sh

Timestamp:

Mar 25, 2026, 11:19:02 AM (11 days ago)

Author:

jbclement

Message:

PEM:

• Fix outputs "diagevo.nc" for 3D data.
• Fix sign in computing exchanges due to adsorption/ice table and in balancing H2O flux from/into atmosphere.
• Few cleanings.

JBC

File:

• trunk/LMDZ.COMMON/libf/evolution/deftank/pem_workflow_lib.sh (modified) (4 diffs)

trunk/LMDZ.COMMON/libf/evolution/deftank/pem_workflow_lib.sh

@@ -498 +498 @@
     cleanup diags/diagfi .nc $i_resume
     cleanup diags/diagsoil .nc $i_resume
-    cleanup diags/Xoutdaily4pem .nc $i_resume
-    cleanup diags/Xoutyearly4pem .nc $i_resume
+    cleanup diags/xoutdaily4pem .nc $i_resume
+    cleanup diags/xoutyearly4pem .nc $i_resume
     cleanup logs/run_pcm .log $i_resume
     cleanup starts/restart1D .txt $i_resume
@@ -527 +527 @@
         fi
         if [ $i_resume -eq $(($n_pcm_runs_ini - 1)) ]; then
-            cp diags/Xoutdaily4pem${i_resume}.nc Xoutdaily4pem_Y1.nc
-            cp diags/Xoutyearly4pem${i_resume}.nc Xoutyearly4pem_Y1.nc
+            cp diags/xoutdaily4pem${i_resume}.nc xoutdaily4pem_y1.nc
+            cp diags/xoutyearly4pem${i_resume}.nc xoutyearly4pem_y1.nc
             submit_cycle $1 $n_pcm_runs_ini $i_pcm_run
         elif [ $i_resume -eq $n_pcm_runs_ini ]; then
-            cp diags/Xoutdaily4pem$(($i_resume - 1)).nc Xoutdaily4pem_Y1.nc
-            cp diags/Xoutyearly4pem$(($i_resume - 1)).nc Xoutyearly4pem_Y1.nc
-            cp diags/Xoutdaily4pem${i_resume}.nc Xoutdaily4pem_Y2.nc
-            cp diags/Xoutyearly4pem${i_resume}.nc Xoutyearly4pem_Y2.nc
+            cp diags/xoutdaily4pem$(($i_resume - 1)).nc xoutdaily4pem_y1.nc
+            cp diags/xoutyearly4pem$(($i_resume - 1)).nc xoutyearly4pem_y1.nc
+            cp diags/xoutdaily4pem${i_resume}.nc xoutdaily4pem_y2.nc
+            cp diags/xoutyearly4pem${i_resume}.nc xoutyearly4pem_y2.nc
             submit_pem_phase $1 # The next job is a PEM run
         else
@@ -554 +554 @@
         cp starts/restartevo$(($i_pem_run - 1)).nc startevo.nc
         if [ $il -eq $(($n_pcm_runs - 1)) ]; then # Second to last PCM run
-            cp diags/Xoutdaily4pem${i_resume}.nc Xoutdaily4pem_Y1.nc
-            cp diags/Xoutyearly4pem${i_resume}.nc Xoutyearly4pem_Y1.nc
+            cp diags/xoutdaily4pem${i_resume}.nc xoutdaily4pem_y1.nc
+            cp diags/xoutyearly4pem${i_resume}.nc xoutyearly4pem_y1.nc
             submit_cycle $1 $n_pcm_runs $(($il + 1))
         elif [ $il -eq $n_pcm_runs ]; then # Last PCM run so the next job is a PEM run
-            cp diags/Xoutdaily4pem$(($i_resume - 1)).nc Xoutdaily4pem_Y1.nc
-            cp diags/Xoutyearly4pem$(($i_resume - 1)).nc Xoutyearly4pem_Y1.nc
-            cp diags/Xoutdaily4pem${i_resume}.nc Xoutdaily4pem_Y2.nc
-            cp diags/Xoutyearly4pem${i_resume}.nc Xoutyearly4pem_Y2.nc
+            cp diags/xoutdaily4pem$(($i_resume - 1)).nc xoutdaily4pem_y1.nc
+            cp diags/xoutyearly4pem$(($i_resume - 1)).nc xoutyearly4pem_y1.nc
+            cp diags/xoutdaily4pem${i_resume}.nc xoutdaily4pem_y2.nc
+            cp diags/xoutyearly4pem${i_resume}.nc xoutyearly4pem_y2.nc
             submit_pem_phase $1
         else
@@ -582 +582 @@
     cleanup starts/restart .nc $(($i_pcm_run - 1))
     cleanup starts/restartfi .nc $(($i_pcm_run - 1))
-    cleanup diags/Xoutdaily4pem .nc $(($i_pcm_run - 1))
-    cleanup diags/Xoutyearly4pem .nc $(($i_pcm_run - 1))
+    cleanup diags/xoutdaily4pem .nc $(($i_pcm_run - 1))
+    cleanup diags/xoutyearly4pem .nc $(($i_pcm_run - 1))
     cleanup diags/diagevo .nc $i_resume
     cleanup diags/diagevo_soil .nc $i_resume