Changeset 3495 for trunk/LMDZ.COMMON/libf/evolution/deftank/PEMrun.job

Timestamp:

Nov 7, 2024, 10:27:18 AM (2 weeks ago)

Author:

jbclement

Message:

PEM:
Modifications related to the launching script:

• There is actually no launching difference between the 1D and 3D models. It is more about how and where you want to execute. So now, the user can choose between two launching modes with the parameter "mode" (0 = "processing scripts"; any other values = "submitting jobs"). The former option is usually used to process the script on a local machine while the latter is used to submit jobs on supercomputer;
• The execution command line in the job scripts that should be modified by the user according to the set-up is now given as an argument at the beginning to be more identifiable and adaptable;
• Making the job scripts more robust to detect a successful end.

JBC

File:

• trunk/LMDZ.COMMON/libf/evolution/deftank/PEMrun.job (modified) (2 diffs)

trunk/LMDZ.COMMON/libf/evolution/deftank/PEMrun.job

@@ -22 +22 @@
 # Name of executable for reshaping PCM data with XIOS:
 exeReshape="reshape_XIOS_output_64x48x32_phymars_seq.e"
+
+# Argument for the PEM execution (for SLURM: "$SLURM_JOB_ID" | for PBD/TORQUE: "$PBS_JOBID" | "" when the script is not run as a job):
+arg_pem="$SLURM_JOB_ID"
 ########################################################################
 
@@ -39 +42 @@
 echo "Run PEM $iPEM is starting."
 cp run_PEM.def run.def
-./$exePEM $SLURM_JOB_ID > out_runPEM${iPEM} 2>&1
-if [ ! -f "restartfi.nc" ] || ! (tail -n 1 out_runPEM${iPEM} | grep -iq "so far, so good!"); then # Check if it ended abnormally
+eval "./$exePEM $arg_pem > out_runPEM${iPEM} 2>&1"
+if [ ! -f "restartfi.nc" ] || ! (tail -n 100 out_runPEM${iPEM} | grep -iq "so far, so good!"); then # Check if it ended abnormally
     echo "Error: the run PEM $iPEM crashed!"
     exit 1