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makemeso @ 1898

Last change on this file since 1898 was 1855, checked in by aslmd, 8 years ago
link latest compiled exec in makemeso
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Rev	Line
[11]	1	#! /bin/bash
	2
	3
	4	##################################
	5	# makemeso allows you to compile #
	6	# WRF with modified LMD physics #
	7	##################################
	8
	9	##############################
	10	# Author: A. Spiga #
	11	# New version : October 2008 #
	12	# Last update : January 2009 #
	13	# November 09 #
[29]	14	# January 11 #
[11]	15	##############################
	16
[68]	17	###############################
	18	#### Type makemeso -h for help
	19	###############################
[11]	20
	21
	22
	23	##############################################################################################
	24	##############################################################################################
	25	##############################################################################################
	26	##############################################################################################
	27
	28	donotcompile=0
	29	donotallow=0
[1588]	30	config='real'
[11]	31	donotcompilephys=0
	32	justphys=0
	33	debug=0
[54]	34	fresh_start=0
[1588]	35	phys="mars_lmd"
[118]	36	scenario=""
[1038]	37	from_scratch=0
[1440]	38
[1588]	39	while getopts "drc:njhgp:fs:xe" options; do
[11]	40	case $options in
[118]	41	d ) donotcompile=1;; ## just to check the compile folder
	42	r ) donotallow=1;; ## allow only known config (useful with 'makemeso < last')
	43	c ) config="${OPTARG}";; ## idealized cases
	44	n ) donotcompilephys=1;; ## do not recompile physics
	45	j ) justphys=1;; ## just compile LMD physics
	46	g ) debug=1;; ## debug mode
[1588]	47	p ) phys="${OPTARG}";; ## choose physics
[118]	48	f ) fresh_start=1;; ## a fresh start
[1038]	49	e ) from_scratch=1;; ## a fresh start with a completely new folder
[1411]	50	s ) scenario="${OPTARG}";; ## a specific scenario (with precompiling flags)
[1590]	51	x ) donotcompile=1;phys="void_lmd_new";donotcompilephys=1;; ## a case with no LMD physics included
[11]	52	h ) echo "
	53	# Use:
	54	#
[142]	55	# makemeso ## basic use (real-case configuration)
[11]	56	#
	57	# makemeso -d ## no compilation, just check the name of the compile folder
	58	#
[68]	59	# makemeso -c ideal ## idealized mode (convective cell, mountain wave, etc...)
[142]	60	# makemeso -c les ## large-eddy simulations mode based on WRFV3
[11]	61	#
[70]	62	# makemeso -n ## do not recompile LMD physics (must have been compiled before)
[68]	63	#
[11]	64	# makemeso < last ## basic use + skip questions [! script must have been executed at least once]
	65	# makemeso -r < last ## basic use + skip questions + only known config
	66	# makemeso -nr < last ## basic use + skip questions + only known config + no LMD phys recompile
	67	#
	68	# makemeso -j ## just compile the LMD physics
	69	#
	70	# makemeso -g ## debug mode
	71	#
	72	# makemeso -h ## display options
[29]	73	#
[1588]	74	# makemeso -p mars_lmd_new ## choose physics
[1597]	75	# venus_lmd_new
[54]	76	#
	77	# makemeso -f ## fresh start [clean -a]
[118]	78	#
[1578]	79	# makemeso -e ## a completely new recompile with erasing the WHOLE compiling folder
[1038]	80	#
[1411]	81	# makemeso -s DUSTSTORM ## a specific scenario (with precompiling flags)
[156]	82	#
	83	# makemeso -x ## a case with no LMD physics included
[11]	84	" ; exit ;;
	85	esac
	86	done
	87
	88	#--------------
	89	# talk w/ user
	90	#--------------
	91	echo '****************************************'
	92	echo ' LMD Mesoscale Model Compiler. Welcome.'
	93	echo '****************************************'
[1588]	94	if [[ "${phys}" == "new" ]]
[29]	95	then
[1588]	96	echo '*********** PHYSICS: ' ${phys}
[29]	97	echo '****************************************'
	98	fi
[11]	99	# computer
	100	uname -a \| grep x86_64 > /dev/null
	101	if [[ "$?" == 0 ]]
	102	then
	103	machine='64'
	104	else
	105	machine='32'
	106	fi
	107	# compiler
	108	echo "Supported compiler options are "
	109	echo " <1> pgf90"
	110	echo " <2> g95"
	111	echo " <3> pgf90 + mpi"
	112	echo " <4> ifort"
	113	echo " <5> ifort + mpi"
	114	echo " <7> xlf + mpi (IBM AIX)"
[1853]	115	echo " <8> gfortran"
[11]	116	echo "Your choice ?" ; read reply
	117	case ${reply} in
	118	1) compilo='pgf' ; numproc=1 ;;
	119	2) compilo='g95' ; numproc=1 ;;
	120	3) compilo='mpi'
[1236]	121	if [[ "${WHERE_MPI}" = "" ]]
[11]	122	then
	123	echo Please initialize the variable WHERE_MPI in your environnement
	124	exit
[1236]	125	fi ;;
[11]	126	4) compilo='ifort' ; numproc=1 ;;
[1236]	127	5) compilo='mpifort' ;;
	128	7) compilo='mpixlf' ;;
[1853]	129	8) compilo='gnu' ; numproc=1 ;;
[11]	130	*) echo not supported by this script ; exit ;;
	131	esac
[1236]	132	# number of processors
[1597]	133	if [[ "${phys}" == "new" ]]
[1236]	134	then
	135	numproc=999
	136	else
	137	case ${reply} in
	138	3) echo How many processors ? e.g. 1, 2, 4, 6, 8, 12, 16, 20, 24, 32, 64, 128 ; read numproc ;;
	139	5) echo How many processors ? e.g. 1, 2, 4, 6, 8, 12, 16, 20, 24, 32, 64, 128 ; read numproc ;;
	140	7) echo How many processors ? e.g. 1, 2, 4, 6, 8, 12, 16, 20, 24, 32, 64, 128 ; read numproc ;;
	141	esac
	142	fi
	143
[11]	144	# dimensions
	145	if [ ${donotcompile} -eq 0 ]
	146	then
[1212]	147	# ngrid: now dynamically set in newphys 03/2014
[1597]	148	if [[ "${phys}" == "new" ]]
[1212]	149	then
	150	lon=999
	151	lat=999
[1272]	152	level=999
[1236]	153	else
	154	echo Grid points in longitude ? ; read lon
	155	echo Grid points in latitude ? ; read lat
[1272]	156	echo Number of vertical levels ? ; read level
[1212]	157	fi
[11]	158	fi
	159	echo Number of domains ? ; read dom
	160
	161	###PB lecture dom si < last
	162
	163	case ${dom} in
	164	1) single='_single' ;;
	165	*) single='_nest' ;;
	166	esac
	167	if [ "${compilo}" = "mpi" -o "${compilo}" = "mpifort" -o "${compilo}" = "mpixlf" ]
	168	then
	169	single=''
	170	fi
	171
	172	testflag=''
	173	####
	174	#testflag='_test'
	175	####
	176
[1588]	177	conf_wrf="${phys}_${config}${scenario}_${compilo}_${machine}${single}${testflag}"
[1234]	178
	179	if [ ${debug} -eq 1 ]
	180	then
	181	conf_wrf="debug_${conf_wrf}"
	182	fi
	183
[11]	184	\rm what_folder 2> /dev/null
	185	echo ${conf_wrf} > what_folder
[1590]	186	if [ ${donotcompile} -eq 0 ]
[11]	187	then
[1590]	188	##\rm what_folder 2> /dev/null
	189	##echo '**********************'
	190	##echo '*** Your folder is ...'
	191	##echo '**********************'
	192	##echo ${conf_wrf} \| tee what_folder
	193	##cat what_folder
	194	##echo ${conf_wrf} > what_folder
	195	##echo ${reply} > what_compilo
	196	##echo ${numproc} > what_numproc
	197	#if [[ "${phys}" != "nophys_" ]]
	198	#then
	199	# exit
	200	#fi
	201	#else
[1212]	202	# tracers: now dynamically set in newphys 09/2013
[1597]	203	if [[ "${phys}" == "new" ]]
[1038]	204	then
	205	tra=999
	206	else
[1236]	207	echo Number of tracers ? ; read tra
[1038]	208	if [ ${tra} -eq 0 ]
	209	then
	210	tra=1
	211	fi
[157]	212	fi
[11]	213	fi
[1038]	214	# 'from scratch' case
	215	if [ ${from_scratch} -eq 1 ]
	216	then
	217	echo "***** I ERASE THE FOLDER "${conf_wrf}
	218	\rm -rf ${conf_wrf}
	219	fi
[11]	220	# folder
[1588]	221
[11]	222	mkdir ${conf_wrf} 2> /dev/null
	223	if [[ "$?" == 0 ]]
	224	then
	225	echo new folder ... link sources
[1588]	226	###############################################
[1597]	227	echo ${phys}
[1588]	228	./SRC/SCRIPTS/copy_model -p ${phys} -c ${config}
[215]	229	mv zeWRFV2 ${conf_wrf}/WRFV2
[1588]	230	###############################################
	231	if [[ "${phys}" == "new" ]]
[1411]	232	then
[1588]	233	cd ${conf_wrf}/WRFV2
[1411]	234	if [[ "${config}" != "les" ]]
[118]	235	then
[1411]	236	cp ../../SRC/WRFV2/Registry/Registry.EM.newphys Registry/Registry.EM
[118]	237	else
[1411]	238	cp -L ../../SRC/LES/WRFV2/Registry/Registry.EM.newphys Registry/Registry.EM
	239	fi
[1588]	240	cd phys
	241	ln -sf module_lmd_driver.F.new module_lmd_driver.F
	242	cd ..
[1212]	243
[1746]	244	else
	245	cd ${conf_wrf}/WRFV2
	246	cd Registry ; ./Registry.bash ; cd ..
[54]	247	fi
[142]	248	#### sparadrap consequent a l'utilisation de copy_model pour les liens
	249	#### -- car alors il manque fftpack
	250	if [[ "${config}" == "les" ]]
[158]	251	then
[1389]	252	cp ../../SRC/LES/correcfft ./
[142]	253	./correcfft
	254	\rm correcfft
	255	fi
[1588]	256	else
[11]	257	cd ${conf_wrf}/WRFV2
[54]	258	if [ ${fresh_start} -eq 1 ]
	259	then
	260	echo '*** FRESH START, I clean everything'
[318]	261	### clean the whole place
[54]	262	clean -a > /dev/null 2> /dev/null
[318]	263	### get a possibly modified registry !
[1588]	264	if [[ "${phys}" == "new" ]]
[333]	265	then
[1411]	266	cp ../../SRC/WRFV2/Registry/Registry.EM.newphys Registry/Registry.EM
	267	else
	268	cp ../../SRC/WRFV2/Registry/Registry.EM Registry/
[333]	269	fi
[341]	270	if [[ "${config}" == "les" ]]
	271	then
	272	cp ../../SRC/LES/WRFV2/Registry/Registry.EM Registry/
	273	fi
[318]	274	### ensure the model will be recompiled from scratch with correct registry
[54]	275	cd Registry ; mv Registry Registry.bak ; Registry.bash ; cd ..
[262]	276	# answer='y' ## a voir... pas si sur
	277	# else
	278	# if [[ "${phys}" != "nophys_" ]]
	279	# then
	280	# echo Did you modify anything in the Registry or clean ? y for yes, any key for no ; read answer
	281	# case ${answer} in
	282	# y) cd Registry ; mv Registry Registry.bak ; Registry.bash ; cd .. ;;
	283	# *) answer='no' ;;
	284	# esac
	285	# fi
[54]	286	fi
[11]	287	fi
[153]	288
[11]	289	# summary
	290	echo '**********************'
	291	echo '*** Your folder is ...'
	292	echo '**********************'
	293	echo ${conf_wrf}
	294	echo '**********************'
	295	echo '****************************************'
	296	echo so ...
	297	echo your computer is ${machine} bits
	298	echo ${compilo} is your compiler
	299	if [[ "${compilo}" = "mpi" ]]
	300	then
	301	echo MPICH is in ${WHERE_MPI}
	302	fi
[1272]	303	echo you have ${dom} domains
[1588]	304	if [[ "${phys}" == "new" ]]
[153]	305	then
[1236]	306	echo number of processors can be changed without recompiling
	307	echo x points can be changed without recompiling
	308	echo y points can be changed without recompiling
[1272]	309	echo z points can be changed without recompiling
[1236]	310	echo number of tracers can be changed without recompiling
	311	else
	312	echo you will use ${numproc} processors
	313	echo you have ${lon} x points
	314	echo ' '${lat} y points
[1272]	315	echo ' '${level} z points
[1236]	316	echo ' '${tra} tracers
[153]	317	fi
[11]	318	echo '****************************************'
	319	# save answer
	320	\rm last 2> /dev/null
	321	touch last
	322	echo ${reply} >> last
[1588]	323	if [[ "${phys}" != "new" ]]
[1236]	324	then
	325	if [ "${compilo}" = "mpi" -o "${compilo}" = "mpifort" -o "${compilo}" = "mpixlf" ]
	326	then
[11]	327	echo ${numproc} >> last
[1236]	328	fi
	329	echo ${lon} >> last
	330	echo ${lat} >> last
[1272]	331	echo ${level} >> last
[1236]	332	fi
[11]	333	echo ${dom} >> last
[1588]	334	if [[ "${phys}" != *"new" ]]
[1236]	335	then
	336	echo ${tra} >> last
	337	fi
[11]	338
	339	#------------
	340	# log files
	341	#------------
	342	\rm log_compile 2> /dev/null
	343	\rm log_error 2> /dev/null
	344
	345	#-----------------
	346	# configure WRF
	347	#-----------------
	348	mv configure.wrf configure.wrf.bak 2> /dev/null
	349	########################
[30]	350	conf_wrf_forall="${compilo}_${machine}${single}${testflag}"
[142]	351
	352	#### in this case options are different because for LES, WRFV3 is used
	353	if [[ "${config}" == "les" ]]
	354	then
	355	conf_wrf_forall="${config}${compilo}_${machine}${single}${testflag}"
	356	fi
	357
[30]	358	case ${conf_wrf_forall} in
[142]	359
	360	#######LES-specific (WRFV3-based) -- previously in 'makeles'
	361	#######
	362
	363	lesmpi_64) ## MPI (dm) 64 bits [PS: remplacer 3 par 4 pour openMP]
	364	\rm conf > /dev/null 2> /dev/null ; touch conf ; echo 3 >> conf ; echo 1 >> conf
	365	\rm configure.wrf > /dev/null 2> /dev/null ; ./configure < conf > /dev/null 2> /dev/null
[1588]	366	sed s+"-lnetcdf"+"-lnetcdf -L../$phys/libo -llmd"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[142]	367	if [[ "$(hostname)" == "ciclad1.ipsl.jussieu.fr" ]]
	368	then
	369	echo "SPECIFIC CHANGES FOR CICLAD CLUSTER. EDIT makemeso IF YOU ENCOUNTER PROBLEMS."
	370	#sed s+"mpif90 -f90=$(SFC)"+"/usr/lib64/openmpi/1.4.2-pgf/bin/mpif90"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	371	#sed s+"mpicc -cc=$(SCC)"+"/usr/lib64/openmpi/1.4.2-gfortran/bin/mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[158]	372	sed s+"mpif90 -f90=\$(SFC)"+"/usr/lib64/openmpi/1.4.3-pgfgcc/bin/mpif90"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	373	sed s+"mpicc -cc=\$(SCC)"+"/usr/lib64/openmpi/1.4.3-pgfgcc/bin/mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[142]	374	else
[390]	375	#sed s+"mpif90"+"$WHERE_MPI/mpif90"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	376	#sed s+"mpicc"+"$WHERE_MPI/mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	377	#### OPENMPI
	378	sed s+"mpif90 -f90=\$(SFC)"+"$WHERE_MPI/mpif90"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	379	sed s+"mpicc -cc=\$(SCC)"+"$WHERE_MPI/mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[142]	380	fi
	381	sed s+"-fastsse"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	382	### pas forcement necessaire ici mais OK
	383	sed s+"-llmd"+"-llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	384	\rm conf > /dev/null ;;
	385
	386	lesmpifort_64) ## MPI (dm) 64 bits IFORT
	387	\rm conf > /dev/null 2> /dev/null ; touch conf ; echo 7 >> conf ; echo 1 >> conf
	388	\rm configure.wrf > /dev/null 2> /dev/null ; ./configure < conf > /dev/null 2> /dev/null
[1597]	389	if [[ "${phys}" != "void" ]]
	390	then
	391	sed s+"-lnetcdf"+"-lnetcdf -L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	392	else
	393	sed s+"-lnetcdf"+"-lnetcdf $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	394	fi
[142]	395	sed s+"mpif90"+"$WHERE_MPI/mpif90"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	396	sed s+"mpicc"+"$WHERE_MPI/mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	397	sed s+"-fastsse"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
[1597]	398	sed s+"O3"+"O3 -mcmodel=large -shared-intel"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[1587]	399	#sed s+"-lnetcdf -lnetcdff"+"-lnetcdf -lnetcdff -L../mars_lmd/libo -llmd"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[674]	400	if [ ${debug} -ne 0 ] # not working for xlf!
	401	then
	402	echo 'DEBUG DEBUG DEBUG DEBUG'
[790]	403	sed s+"# -g"+" -g -no-ftz -traceback -ftrapuv -fp-stack-check -check"+g configure.wrf > yeah
[674]	404	mv -f yeah configure.wrf
	405	fi
[142]	406	\rm conf > /dev/null ;;
	407
	408	#######
	409	#######LES-specific (WRFV3-based) -- previously in 'makeles'
	410
[11]	411	# GFORTRAN, 64 bits, no nesting
	412	gnu_64_single) cd arch ; ln -sf ../configure.defaults.gfortran64 configure.defaults ; cd ..
	413	echo 15 \| configure > log_compile 2> log_error
[1588]	414	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
	415	sed s+"-L../$phys/libo -llmd"+"-L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf ;;
[11]	416	# PGF90, 32 bits, no nesting
	417	pgf_32_single) echo 1 \| configure > log_compile 2> log_error
[1588]	418	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
[11]	419	# PGF90, 32 bits, nesting
	420	pgf_32_nest) echo 2 \| configure > log_compile 2> log_error
[1588]	421	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
[11]	422	# PGF90, 64 bits, no nesting
	423	pgf_64_single) echo 1 \| configure > log_compile 2> log_error
[330]	424	#### the following line is necessary because readtesassim has a line "use netcdf" in it!
[1588]	425	#sed s+"-L../$phys/libo -llmd"+"-L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	426	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
[11]	427	# PGF90, 64 bits, nesting
	428	pgf_64_nest) cd arch ; ln -sf ../configure.defaults.fix64nest configure.defaults ; cd ..
	429	echo 4 \| configure > log_compile 2> log_error
[1588]	430	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
[11]	431	# G95, 32 bits, no nesting
	432	g95_32_single) echo 13 \| configure > log_compile 2> log_error
[1588]	433	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
[24]	434	# G95, 64 bits, no nesting ### we modify configure.defaults to add x86_64 next to g95 in the header comment
	435	g95_64_single) cd arch ; sed s/"PC Linux i486 i586 i686, g95 compiler"/"PC Linux i486 i586 i686 x86_64, g95 compiler"/g configure.defaults > yeahyeahyeah ; rm configure.defaults ; mv yeahyeahyeah configure.defaults ; cd ..
	436	echo 14 \| configure > log_compile 2> log_error
[330]	437	##### marche pas ....
	438	#sed s+"-fno-second-underscore"+""+g configure.wrf > yeah ; mv -f yeah configure.wrf
[1588]	439	#sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
	440	#sed s+"-L../$phys/libo -llmd"+"-L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf ;;
	441	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
[24]	442	#sed s+"= g95"+"= /home/physastro/aspiga/mysoft/g95/g95-install/bin/x86_64-unknown-linux-gnu-g95"+g configure.wrf > yeah ; mv -f yeah configure.wrf;;
[11]	443	# IFORT, 64 bits, no nesting
	444	ifort_64_single) echo 5 \| configure > log_compile 2> log_error
	445	sed s+"-DIFORT_KLUDGE"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
[674]	446	if [ ${debug} -ne 0 ] # not working for xlf!
	447	then
	448	echo 'DEBUG DEBUG DEBUG DEBUG'
[790]	449	sed s+"# -g"+" -g -no-ftz -traceback -ftrapuv -fp-stack-check -check"+g configure.wrf > yeah
[674]	450	mv -f yeah configure.wrf
	451	fi
[11]	452	## !!! NETCDF must be defined
[1588]	453	sed s+"lio_grib_share"+"lio_grib_share -L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah
[11]	454	mv -f yeah configure.wrf ;;
	455	mpifort_64) # MPI+IFORT, 64 bits, no nesting / nesting
[1752]	456	echo 9 \| ./configure > log_compile 2> log_error
[1588]	457	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
[11]	458	sed s+"-f90=ifort"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	459	sed s+"-cc=icc"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	460	sed s+"-DIFORT_KLUDGE"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
[1440]	461	sed s+"-O1"+"-O1 -mcmodel=medium -shared-intel"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	462	sed s+"-O2"+"-O2 -mcmodel=medium -shared-intel"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	463	sed s+"-O3"+"-O3 -mcmodel=medium -shared-intel"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[674]	464	if [ ${debug} -ne 0 ] # not working for xlf!
	465	then
	466	echo 'DEBUG DEBUG DEBUG DEBUG'
[1752]	467	sed s+"#-g"+" -g -no-ftz -traceback -ftrapuv -fp-stack-check -check"+g configure.wrf > yeah
[674]	468	mv -f yeah configure.wrf
	469	fi
[11]	470	sed s+"O3"+"O2"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	471	#sed s+"O3"+"O0"+g configure.wrf > yeah ; mv -f yeah configure.wrf ### pour compilation rapide
	472	#-w -ftz -align all -fno-alias -fp-model precise >>> options indiquees dans WRF3
	473	#http://software.intel.com/en-us/articles/performance-tools-for-software-developers-building-wrf-with-the-intel-compilers/
	474	#### NB: RSL is replaced by RSL_LITE, better memory capacity, less seg fault
	475	sed s+"../external/RSL/RSL"+"../external/RSL_LITE"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	476	sed s+"-DWRF_RSL_IO"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	477	sed s+"-DRSL"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	478	sed s+"librsl.a"+"librsl_lite.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	479	sed s+"../external/RSL/gen"+"../external/RSL_LITE/gen"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	480	sed s+"../external/RSL/module"+"../external/RSL_LITE/module"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	481	sed s+"-lrsl"+"-lrsl_lite"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	482	sed s+"linux"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	483	### necessary even if mpi-selector is used (no need in makegcm though)
	484	sed s+"mpif90"+"${WHERE_MPI}/mpif90"+g configure.wrf \| sed s+"mpicc"+"${WHERE_MPI}/mpicc"+g > yeah ; mv -f yeah configure.wrf
	485	sed s+"mpicc"+"mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	486	## !!! NETCDF must be defined
[1752]	487	if [[ "${phys}" != "void" ]]
	488	then
	489	sed s+"-L../$phys/libo -llmd"+"-L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah
	490	else
	491	sed s+"-lesmf_time"+"-lesmf_time $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah
	492	fi
[70]	493	mv -f yeah configure.wrf
	494	#### POUR LE TRAITEMENT PARTICULIERS des NESTS sur iDATAPLEX [cf. module_lmd_driver]
[71]	495	sed s+"ARCHFLAGS = "+"ARCHFLAGS = -DSPECIAL_NEST_SAVE "+g configure.wrf > yeah
[11]	496	mv -f yeah configure.wrf ;;
	497	# MPICH, 64 bits, no nesting / nesting
	498	mpi_64) cd arch ; ln -sf ../configure.defaults.fix64nest configure.defaults ; cd ..
	499	echo 3 \| configure > log_compile 2> log_error
[1588]	500	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
[227]	501	### the following line is necessary because readtesassim has a line "use netcdf" in it!
[1588]	502	sed s+"-L../$phys/libo -llmd"+"-L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[11]	503	sed s+"mpif90"+"${WHERE_MPI}/mpif90"+g configure.wrf \| sed s+"mpicc"+"${WHERE_MPI}/mpicc"+g \| sed s+"mpicc"+"mpicc -DMPI2_SUPPORT"+g > yeah
[341]	504	#sed s+"mpif90"+"${WHERE_MPI}/mpif90"+g configure.wrf \| sed s+"mpicc"+"${WHERE_MPI}/mpicc"+g \| sed s+"mpicc"+"mpicc -DMPI2_SUPPORT -w -O3"+g > yeah
[11]	505	#\| sed s+"fastsse"+"fast"+g > yeah
[341]	506	mv -f yeah configure.wrf ;;
[335]	507	# #sed s+"-fastsse"+"-O2 -Munroll -Mcache_align"+g configure.wrf > yeah
	508	# ##sed s+"-fastsse"+"-O2 -fpic"+g configure.wrf > yeah ## marche pas, ILM problem
	509	# ##sed s+"-fastsse"+"-mcmodel=medium -Mlarge_arrays"+g configure.wrf > yeah ## marche pas, ILM problem
	510	#sed s+"-fastsse"+"-O3 -tp=nehalem-64 -fastsse -Mscalarsse -Mvect=sse -Mipa=fast"+g configure.wrf > yeah
	511	#sed s+"-fastsse"+"-O2 -Munroll -Mcache_align"+g configure.wrf > yeah
[341]	512	#sed s+"-fastsse"+""+g configure.wrf > yeah
	513	#sed s+"-fastsse"+"-fast"+g configure.wrf > yeah
	514	#sed s+"-fastsse"+"-Mvect=noaltcode -Msmartalloc -Mprefetch=distance:8 -Mfprelaxed"+g configure.wrf > yeah
	515	#mv -f yeah configure.wrf ;;
[11]	516	# MPICH, 64 bits, OK with periodic BC but no positive definite
	517	mpi_64_test) cd arch ; ln -sf ../configure.defaults.fix64nest configure.defaults ; cd ..
	518	echo 2 \| configure > log_compile 2> log_error
[1588]	519	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
[11]	520	sed s+"mpif90"+"${WHERE_MPI}/mpif90"+g configure.wrf \| sed s+"mpicc"+"${WHERE_MPI}/mpicc"+g \| sed s+"mpicc"+"mpicc -DMPI2_SUPPORT"+g > yeah
	521	mv -f yeah configure.wrf ;;
	522	# XLF+MPICH on AIX machine (64 bits) with nesting, NB: the 32bits notice is not to be considered
	523	mpixlf_32) cd arch ; ln -sf ../configure.defaults.fix64nest configure.defaults ; cd ..
	524	echo 3 \| configure > log_compile 2> log_error
[1588]	525	sed -f physics.sed configure.wrf > yeah
[11]	526	mv -f yeah configure.wrf ;;
	527	# ANYTHING ELSE
	528	*) echo NO PRESETS ...
	529	if [ ${donotallow} -eq 0 ]
	530	then
	531	configure
	532	else
	533	# problem when an input file is used
	534	echo 'please cd to '$PWD' and type ./configure'
	535	exit
	536	fi ;;
	537	esac
	538	########################
	539
[142]	540
[156]	541	### here a case structure would be great
	542
[1588]	543	if [[ "${phys}" == "new" ]]
[29]	544	then
[142]	545	if [[ "${config}" == "les" ]] ### LES is different because of WRFV3
	546	then
	547	sed s+"ARCH_LOCAL = "+"ARCH_LOCAL = -DNEWPHYS "+g configure.wrf > yeah
	548	else
	549	sed s+"ARCHFLAGS = "+"ARCHFLAGS = -DNEWPHYS "+g configure.wrf > yeah
	550	fi
[29]	551	mv -f yeah configure.wrf
	552	fi
[11]	553
[1411]	554	### SCENARIO SCENARIO SCENARIO
	555	if [[ ! ("${scenario}" == "") ]] ### not supported with LES for the moment?
[118]	556	then
[1411]	557	# precompiling flag in WRF part
[118]	558	sed s+"ARCHFLAGS = "+"ARCHFLAGS = -D${scenario} "+g configure.wrf > yeah
	559	mv -f yeah configure.wrf
[1411]	560	# precompiling flag in LMD part
[1588]	561	cd $phys
[1411]	562	cp -Lrf makegcm_${compilo} yeah
	563	\rm makegcm_${compilo}
	564	sed s+"-DMESOSCALE"+"-D${scenario} -DMESOSCALE"+ yeah > makegcm_${compilo}
	565	chmod 755 makegcm_${compilo}
	566	\rm yeah
	567	cd ..
[118]	568	fi
	569
[156]	570	################
[1590]	571	#if [[ "${phys}" == "nophys_" ]]
	572	#then
	573	# if [[ "${config}" == "les" ]] ### LES is different because of WRFV3
	574	# then
	575	# sed s+"ARCH_LOCAL = "+"ARCH_LOCAL = -DNOPHYS "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	576	# sed s+"-L../$phys/libo -llmd"+""+g configure.wrf > yeah ; mv -f yeah configure.wrf
	577	# else
	578	# ### not tested yet but should be working
	579	# echo CAUTION CAUTION CAUTION NOT FULLY TESTED
	580	# sed s+"ARCHFLAGS = "+"ARCHFLAGS = -DNOPHYS "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	581	# sed s+"-L../$phys/libo -llmd"+""+g configure.wrf > yeah ; mv -f yeah configure.wrf
	582	# fi
	583	#fi
[156]	584	################
	585
[1597]	586	if [[ "${phys}" == "venus" ]]
	587	then
	588	sed s+"LIB_BUNDLED = "+"LIB_BUNDLED = /usr/lib64/liblapack.so \ "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	589	fi
	590
[11]	591	if [ ${debug} -ne 0 ] # not working for xlf!
	592	then
	593	echo 'DEBUG DEBUG DEBUG DEBUG'
[790]	594	sed s+"# -g"+" -g -no-ftz -traceback -ftrapuv -fp-stack-check -check"+g configure.wrf > yeah
	595	#sed s+"# -g"+"-g -Ktrap=fp -Mbounds"+g configure.wrf > yeah
	596	#sed s+"# -g"+"-g"+g configure.wrf > yeah
[11]	597	mv -f yeah configure.wrf
	598	fi
	599
[1605]	600	if [[ "${phys}" == "prescribed" ]]
	601	then
	602	donotcompilephys=1
[1846]	603	fi
[1597]	604
[1846]	605	# some compiler and environment mess things up when using -C
	606	sed s+"-C"+""+g configure.wrf > yeah ; mv -f yeah configure.wrf
	607
[1588]	608	#exit
[11]	609	##################################################
	610	# compile physics
	611	##################################################
[1597]	612	if [ ${donotcompilephys} -eq 0 ] #\|\| [[ "${phys}" != "prescribed" ]]
[11]	613	then
	614
[1588]	615	cd $phys/
[11]	616
[1588]	617	if [[ "${phys}" == "new" ]]
[1212]	618	then
	619	divx=1
	620	divy=1
	621	else
[11]	622	# required size
	623	#----------------
	624	case ${numproc} in
[239]	625	1) divx=1 ; divy=1 ;;
	626	2) divx=1 ; divy=2 ;;
	627	4) divx=2 ; divy=2 ;;
	628	6) divx=2 ; divy=3 ;;
	629	8) divx=2 ; divy=4 ;;
	630	12) divx=3 ; divy=4 ;;
	631	16) divx=4 ; divy=4 ;;
	632	20) divx=4 ; divy=5 ;;
	633	24) divx=4 ; divy=6 ;;
	634	32) divx=4 ; divy=8 ;;
	635	64) divx=8 ; divy=8 ;;
	636	128) divx=8 ; divy=16 ;;
	637	*) echo not yet supported ; exit ;;
[11]	638	esac
[1212]	639	fi
[240]	640	physx=$(expr ${lon} - 1)
	641	restex=$(expr ${physx} \% ${divx})
	642	physy=$(expr ${lat} - 1)
	643	restey=$(expr ${physy} \% ${divy})
[239]	644	if [[ ${restex} != 0 \|\| ${restey} != 0 ]]
	645	then
	646	echo nx-1 shall be divided by ${divx}
	647	echo ny-1 shall be divided by ${divy}
	648	exit
	649	fi
[240]	650	physx=$(expr ${physx} \/ ${divx})
	651	physy=$(expr ${physy} \/ ${divy})
[239]	652	physz=$(expr ${level} - 1)
[11]	653
	654	# change this if you change num_soil_layers in WRF
	655	# -- default is 10
[1588]	656	if [[ "${phys}" == "new" ]]
[30]	657	then
[1212]	658	soilsize=18 ## nouvelle physique. ne sert a rien ici. voir comsoil.
[30]	659	else
	660	soilsize=10
	661	fi
[11]	662
	663	# GCM environment variables
	664	#--------------------------
	665	export LMDGCM=$PWD
	666	export LIBOGCM=$PWD/libo
	667
	668	# generate the appropriate dimphys
	669	#---------------------------------
[1597]	670	if [[ "${phys}" == "mars" ]]
	671	then
	672	cd libf/phymars
	673	elif [[ "${phys}" == "venus" ]]
	674	then
	675	cd libf/phyvenus
	676	fi
[11]	677	\rm dimphys.h 2> /dev/null
[1746]	678	# if [[ "${phys}" == "newphys_" ]]
	679	# then
	680	# ln -sf ../../meso_dimphys.h_ref . ## ne sert plus !!
	681	# else
	682	if [[ "${phys}" == "mars_lmd" ]]
[235]	683	then
[1272]	684	physize=$(expr ${physx} \* ${physy})
	685	sed s/--xsize--/${physx}/g meso_dimphys.h_ref \| sed s/--ysize--/${physy}/g \| sed s/--physize--/${physize}/g \| sed s/--zsize--/${physz}/g \| sed s/--soilsize--/${soilsize}/g > dimphys.h
	686	head -15 dimphys.h
[235]	687	fi
[1746]	688	#### TEST new new phys
[1578]	689	#if [[ "${phys}" == "newphys_" ]]
	690	#then
	691	# touch gr_fi_dyn.F.lien
	692	# ln -sf ../dyn3d/gr_fi_dyn.F . ## dommage, a corriger
[1746]	693	################################
	694	################################
	695	################################
[1578]	696	#fi
[1746]	697	####
	698	####
[11]	699	cd ../..
	700
	701	# prepare for nesting
	702	#---------------------
	703	cd libf
	704	duplicate${dom} 2> /dev/null
	705	cd ..
	706
	707	# compile physics
	708	#--------------------------
	709	\rm libf/grid/dimensions.h 2> /dev/null
	710	\rm -rf libo/* 2> /dev/null
	711	echo 1. compiling LMD physics ...
	712	echo compilation info in:
	713	echo $PWD/libo/log_compile_phys
[1746]	714
[1597]	715	if [ ${debug} -ne 0 ]
[11]	716	then
[1597]	717	if [[ "${phys}" == "mars" ]]
	718	then
	719	echo 'DEBUG DEBUG DEBUG DEBUG'
[1746]	720	nohup makegcm_${compilo} -debug -full -t ${tra} -p mars -d ${physz} testphys1d \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
[1597]	721	elif [[ "${phys}" == "venus" ]]
[1752]	722	then
[1597]	723	echo 'DEBUG DEBUG DEBUG DEBUG'
[1752]	724	nohup ./makelmdz -debug -full -p venus -d 51 rcm1d -arch linux-ifort -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys # on /u/ and /planeto/
	725	nohup ./makelmdz --debug p venus -d 51 rcm1d -arch linux-ifort -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
[1597]	726	fi
[11]	727	else
[1746]	728	if [[ "${phys}" == "mars" ]]
[1597]	729	then
	730	nohup makegcm_${compilo} -t ${tra} -p mars -d ${physz} testphys1d \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
	731	elif [[ "${phys}" == "venus" ]]
	732	then
[1752]	733	nohup ./makelmdz -full -p venus -d 51 rcm1d -arch linux-ifort_meso -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys # on /u/ and /planeto/
	734	nohup ./makelmdz -p venus -d 51 rcm1d -arch linux-ifort_meso -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
	735	#nohup ./makelmdz -full -p venus -d 51 rcm1d -arch CICLADifort -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys # on CICLAD
	736	#nohup ./makelmdz -p venus -d 51 rcm1d -arch CICLADifort -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
	737	#nohup ./makelmdz -full -p venus -d 51 rcm1d -arch X64_MESU -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys #on MESU
	738	#nohup ./makelmdz -p venus -d 51 rcm1d -arch X64_MESU -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
	739	#nohup makelmdz -full -p venus -d 51 rcm1d -arch X64_OCCIGEN -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys #on OCCIGEN
	740	#nohup makelmdz -p venus -d 51 rcm1d -arch X64_OCCIGEN -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
[1597]	741	fi
[11]	742	fi
	743	echo ... done
	744	# clean the duplicate routines
	745	cd libf
	746	duplicate1 2> /dev/null
	747	cd ..
	748
	749	# merge LMD executables in one lib
	750	#--------------------------------------
	751	cd libo
	752	mkdir temp
[1752]	753	if [[ "${phys}" == "mars" ]]
[1601]	754	then
[1752]	755	cp -f LINUX/.a temp
	756	else #VENUS
	757	cp -f linux/.a temp/ # on /u/ and /planeto/
	758	#cp -f /home/mlefevre/modipsl/lib/libioipsl.a temp/ #on CICLAD
	759	#cp -f X64/.a temp #on MESU and OCCIGEN
[1601]	760	cp -f ../ioipsl/libioipsl.a temp/
[1597]	761	fi
[11]	762	cd temp
[1597]	763	if [[ "${phys}" == "mars" ]]
	764	then
	765	ar x libbibio.a
	766	ar x libphymars.a
	767	ar x libaeronomars.a
[1746]	768	else
[1597]	769	ar x libphyvenus.a
	770	ar x libmisc.a
	771	ar x libphy_common.a
[1601]	772	ar x libioipsl.a
[1597]	773	fi
[11]	774	\rm *.a
	775	ar r liblmd.a *
	776	cp -f liblmd.a ..
	777	cd ..
	778	\rm -r temp
	779	nm liblmd.a > liblmd_content
	780	# finish merge
	781	cd ..
[1588]	782	if [[ "${phys}" == "new" ]]
[1234]	783	then
[1597]	784	if [[ "${phys}" == "mars" ]]
	785	then
	786	# include modules for interfacing
	787	mv *.mod ../inc/
[1752]	788	elif [[ "${phys}" == "venus" ]]
	789	then
	790	mv ./libo/linux/.mod ../inc/ # on /u/ and /planeto/
	791	#mv ./libo/CICLAD/.mod ../inc/ # on CICLAD
	792	#mv ./libo/X64/.mod ../inc/ # on MESU and OCCIGEN
[1601]	793	cp -f ./ioipsl/*.mod ../inc/
[1597]	794	fi
[1234]	795	fi
	796
[1597]	797
[11]	798	# save a copy
	799	#--------------
[1247]	800	cp -f libo/liblmd.a libo/liblmd.a_${lon}_${lat}_${level}_${dom}_${tra}
[11]	801	echo '****************************************'
	802
	803	# ok
	804	#----
	805	cd ..
	806
	807	# manage nest includes in module_lmd_driver.F
	808	#----
	809	cp call_meso_inifis$dom.inc call_meso_inifis.inc
	810	cp call_meso_physiq$dom.inc call_meso_physiq.inc
	811
	812
	813	fi
	814	##################################################
	815	# END compile physics
	816	##################################################
	817
	818	#------------------
	819	# compile WRF
	820	#------------------
	821	if [ ${justphys} -eq 0 ]
	822	then
	823
	824	echo 2. compiling WRF dynamical core ...
	825
[1590]	826	#if [[ "${phys}" == "nophys_" ]]
	827	#then
	828	# echo 'NO LMD PHYSICS included'
	829	#else
	830	# if [[ ! ( -f "call_meso_physiq.inc" ) ]]
	831	# then
	832	# echo 'did you compile the physics ? no call_meso_physiq.inc !'
	833	# exit
	834	# fi
	835	#fi
[11]	836
	837	# be sure to compile with the most recent physics
	838	touch phys/module_lmd_driver.F
	839
	840	# talk to user
	841	echo '>>> compiling ... this may be long ... <<<'
	842	echo check progress in:
	843	echo $PWD/log_compile
	844	echo check possible errors in:
	845	echo $PWD/log_error
	846
	847	# compile ...
[1588]	848	echo '>>> YOUR CONFIG IS : '${config}
[11]	849	case ${config} in
[1588]	850	'real') ./compile em_real > log_compile 2> log_error
[11]	851	# save executables
	852	cd main
[68]	853	if [[ -f real.exe ]]
	854	then
	855	echo 'Looks good ! real.exe is here...'
	856	fi
[11]	857	if [[ -f wrf.exe ]]
	858	then
	859	echo 'Looks good ! wrf.exe is here...'
	860	fi
[1247]	861	cp -f real.exe ../../real_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
	862	cp -f wrf.exe ../../wrf_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
[11]	863	cd .. ;;
[68]	864	'ideal') #mkdir 'test/em_quarter_ss' 2> /dev/null
[1588]	865	#echo '>>> YOUR CONFIG IS : '${config}
[421]	866	./compile em_quarter_ss > log_compile 2> log_error
[11]	867	# save executables
	868	cd main
[68]	869	if [[ -f ideal.exe ]]
	870	then
	871	echo 'Looks good ! ideal.exe is here...'
	872	fi
[11]	873	if [[ -f wrf.exe ]]
	874	then
	875	echo 'Looks good ! wrf.exe is here...'
	876	fi
[1247]	877	cp -f ideal.exe ../../ideal_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
	878	cp -f wrf.exe ../../wrf_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
[11]	879	cd .. ;;
[1588]	880	'les') #echo '>>> YOUR CONFIG IS : '${config}
[142]	881	mkdir 'test/em_les' 2> /dev/null
[421]	882	./compile em_les > log_compile 2> log_error
[142]	883	# save executables
	884	cd main
	885	if [[ -f ideal.exe ]]
	886	then
	887	echo 'Looks good ! ideal.exe is here...'
	888	fi
	889	if [[ -f wrf.exe ]]
	890	then
	891	echo 'Looks good ! wrf.exe is here...'
	892	fi
[1247]	893	cp -f ideal.exe ../../ideal_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
	894	cp -f wrf.exe ../../wrf_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
[142]	895	cd .. ;;
	896	*) echo not supported... please use ; echo ideal les ; exit ;;
[11]	897	esac
	898	echo '*****last lines from log_error*******'
	899	tail -n 20 log_error
	900	fi
	901
	902	# the end
	903	echo '****************************************'
	904	echo 'done.'
	905	echo '****************************************'
[1247]	906	cp last ../makemeso_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}
[11]	907	mv last ../../
[1247]	908	svn info ../../ > ../makemeso_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.svn.info
[11]	909
[1445]	910	# link latest compiled folder as LATEST
	911	cd ../../
[1448]	912	rm -rf LATEST
[1445]	913	ln -sf ${conf_wrf} LATEST
	914
[1855]	915	# link latest compiled exec
	916	cd LATEST
	917	case ${config} in
	918	'real') ln -sf real_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe real.exe ;;
	919	'ideal') ln -sf ideal_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe ideal.exe ;;
	920	'les') ln -sf ideal_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe ideal.exe ;;
	921	esac
	922	ln -sf wrf_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe wrf.exe
	923	cd ..
	924
[11]	925	# add here specific messages
	926	if [[ "${dom}" != "1" ]]
	927	then
	928	nest=$(expr ${lon} + 4)
	929	echo NB: in namelist.input, please set:
	930	echo '
	931	max_dom = '$dom'
	932	s_we = 1,1,
	933	e_we = '$lon','$nest',
	934	s_sn = 1,1,
	935	e_sn = '$lat','$nest',
	936	s_vert = 1,1,
	937	e_vert = '$level','$level','
	938	fi
	939
[1588]	940

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