| 1 | #!/bin/bash |
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| 2 | # $Id: makelmdz_fcm 1615 2012-02-10 15:42:26Z emillour $ |
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| 3 | # This is a script in Bash. |
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| 4 | |
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| 5 | # FH : on ne crée plus le fichier arch.mk qui est supposé exister par |
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| 6 | # FH : ailleurs. |
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| 7 | # FH : ulterieurement, ce fichier sera pré-existant pour une série |
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| 8 | # FH : de configurations en versions optimisées et debug qui seront |
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| 9 | # FH : liés (ln -s) avec arch.mk en fonction de l'architecture. |
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| 10 | # FH : Pour le moment, cette version est en test et on peut créer les |
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| 11 | # FH : arch.mk en lançant une première fois makegcm. |
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| 12 | # |
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| 13 | ##set -x |
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| 14 | ######################################################################## |
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| 15 | # options par defaut pour la commande make |
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| 16 | ######################################################################## |
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| 17 | |
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| 18 | dim="96x72x19" |
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| 19 | physique=lmd |
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| 20 | filtre=filtrez |
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| 21 | grille=reg |
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| 22 | couple=false |
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| 23 | veget=false |
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| 24 | sisvat=false |
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| 25 | rrtm=false |
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| 26 | dust=false |
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| 27 | strataer=false |
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| 28 | chimie=false |
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| 29 | chemistry=false |
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| 30 | parallel=none |
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| 31 | paramem="par" |
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| 32 | compil_mod=prod |
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| 33 | io=ioipsl |
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| 34 | LIBPREFIX="" |
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| 35 | cosp=false |
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| 36 | bands="" |
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| 37 | scatterers="" |
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| 38 | job=1 |
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| 39 | full='' |
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| 40 | libphy=false |
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| 41 | |
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| 42 | arch_defined="FALSE" |
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| 43 | arch_path="arch" |
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| 44 | arch_default_path="arch" |
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| 45 | |
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| 46 | LMDGCM=`/bin/pwd` |
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| 47 | LIBOGCM=$LMDGCM/libo |
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| 48 | LIBFGCM=$LMDGCM/libf |
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| 49 | DYN_COMMON_PATH=$LIBFGCM/dyn3d_common |
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| 50 | # path for optional packages, but default set to ".void_dir" |
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| 51 | FILTRE_PATH=$LMDGCM/.void_dir |
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| 52 | DYN_PHYS_PATH=$LMDGCM/.void_dir |
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| 53 | DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir |
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| 54 | PHY_COMMON_PATH=$LMDGCM/.void_dir |
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| 55 | RRTM_PATH=$LMDGCM/.void_dir |
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| 56 | DUST_PATH=$LMDGCM/.void_dir |
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| 57 | STRATAER_PATH=$LMDGCM/.void_dir |
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| 58 | SISVAT_PATH=$LMDGCM/.void_dir |
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| 59 | COSP_PATH=$LMDGCM/.void_dir |
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| 60 | CHEM_PATH=$LMDGCM/.void_dir |
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| 61 | CLOUD_PATH=$LMDGCM/.void_dir |
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| 62 | MUPHY_PATH=$LMDGCM/.void_dir |
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| 63 | AERONO_PATH=$LMDGCM/.void_dir |
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| 64 | # Path to fcm utility: |
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| 65 | ##fcm_path=$LMDGCM/tools/fcm/bin |
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| 66 | #fcm_path=$(dirname $(which fcm)) |
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| 67 | fcm_path=/planeto/mturbet/planeto2-mturbet/FCM_V1.2/bin |
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| 68 | |
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| 69 | ######################################################################## |
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| 70 | # Quelques initialisations de variables du shell. |
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| 71 | ######################################################################## |
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| 72 | |
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| 73 | CPP_KEY="" |
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| 74 | INCLUDE="" |
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| 75 | LIB="" |
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| 76 | adjnt="" |
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| 77 | COMPIL_FFLAGS="%PROD_FFLAGS" |
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| 78 | PARA_FFLAGS="" |
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| 79 | PARA_LD="" |
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| 80 | EXT_SRC="" |
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| 81 | |
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| 82 | ######################################################################## |
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| 83 | # lecture des options de mymake |
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| 84 | ######################################################################## |
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| 85 | |
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| 86 | while (($# > 0)) |
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| 87 | do |
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| 88 | case $1 in |
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| 89 | "-h") cat <<fin |
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| 90 | Usage : |
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| 91 | makegcm [options] -arch arch exec |
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| 92 | [-h] : brief help |
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| 93 | [-d [[IMx]JMx]LM] : IM, JM, LM are the dimensions in x, y, z (default: $dim) |
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| 94 | [-s nscat] : (Generic) Number of radiatively active scatterers |
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| 95 | [-b IRxVIS] : (Generic) Number of infrared (IR) and visible (VIS) bands for radiative transfer |
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| 96 | [-p PHYS] : set of physical parametrizations (in libf/phyPHYS), (default: lmd) |
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| 97 | [-prod / -dev / -debug] : compilation mode production (default) / developement / debug . |
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| 98 | [-c false/MPI1/OMCT] : (Earth) coupling with ocean model : MPI1/OMCT/false (default: false) |
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| 99 | [-v false/orchidee2.0/orchidee1.9/true] : (Earth) version of the vegetation model to include (default: false) |
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| 100 | false : no vegetation model |
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| 101 | orchidee2.0 : compile using ORCHIDEE 2.0 (or more recent version) |
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| 102 | orchidee1.9 : compile using ORCHIDEE up to the version including OpenMP in ORCHIDEE : tag 1.9-1.9.5(version AR5)-1.9.6 |
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| 103 | true : (obsolete; for backward compatibility) use ORCHIDEE tag 1.9-1.9.6 |
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| 104 | [-chimie INCA/false] : (Earth) with INCA chemistry model or without (default: false) |
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| 105 | [-cosp cosp/false] : (Earth) add the cosp model (default: false) |
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| 106 | [-sisvat true/false] : (Earth) compile with/without sisvat package (default: false) |
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| 107 | [-rrtm true/false] : (Earth) compile with/without rrtm package (default: false) |
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| 108 | [-dust true/false] : (Earth) compile with/without the dust package by Boucher and co (default: false) |
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| 109 | [-strataer true/false] : (Earth) compile with/without the strat aer package by Boucher and co (default: false) |
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| 110 | [-parallel none/mpi/omp/mpi_omp] : parallelism (default: none) : mpi, openmp or mixted mpi_openmp |
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| 111 | [-g GRI] : grid configuration in dyn3d/GRI_xy.h (default: reg, inclues a zoom) |
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| 112 | [-io ioipsl/mix/xios] : Input/Output library (default: ioipsl) |
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| 113 | [-include INCLUDES] : extra include path to add |
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| 114 | [-cpp CPP_KEY] : additional preprocessing definitions |
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| 115 | [-adjnt] : adjoint model, not operational ... |
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| 116 | [-mem] : reduced memory dynamics (if in parallel mode) |
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| 117 | [-filtre NOMFILTRE] : use filtre from libf/NOMFILTRE (default: filtrez) |
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| 118 | [-link LINKS] : additional links with other libraries |
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| 119 | [-j n] : active parallel compiling on ntask |
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| 120 | [-full] : full (re-)compilation (from scratch) |
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| 121 | [-fcm_path path] : path to the fcm tool (default: tools/fcm/bin) |
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| 122 | [-ext_src path] : path to an additional set of routines to compile with the model |
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| 123 | [-arch_path path] : path to architecture files (default: $arch_default_path) |
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| 124 | -arch arch : target architecture |
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| 125 | exec : executable to build |
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| 126 | fin |
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| 127 | exit;; |
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| 128 | |
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| 129 | "-d") |
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| 130 | dim=$2 ; shift ; shift ;; |
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| 131 | |
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| 132 | "-p") |
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| 133 | physique="$2" ; shift ; shift ;; |
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| 134 | |
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| 135 | "-s") |
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| 136 | scatterers=$2 ; shift ; shift ;; |
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| 137 | |
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| 138 | "-b") |
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| 139 | bands=$2 ; shift ; shift ;; |
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| 140 | |
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| 141 | "-g") |
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| 142 | grille="$2" ; shift ; shift ;; |
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| 143 | |
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| 144 | "-c") |
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| 145 | couple="$2" ; shift ; shift ;; |
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| 146 | |
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| 147 | "-prod") |
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| 148 | compil_mod="prod" ; shift ;; |
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| 149 | |
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| 150 | "-dev") |
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| 151 | compil_mod="dev" ; shift ;; |
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| 152 | |
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| 153 | "-debug") |
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| 154 | compil_mod="debug" ; shift ;; |
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| 155 | |
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| 156 | "-io") |
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| 157 | io="$2" ; shift ; shift ;; |
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| 158 | |
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| 159 | "-v") |
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| 160 | veget="$2" ; shift ; shift ;; |
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| 161 | |
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| 162 | "-sisvat") |
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| 163 | sisvat="$2" ; shift ; shift ;; |
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| 164 | |
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| 165 | "-rrtm") |
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| 166 | rrtm="$2" ; shift ; shift ;; |
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| 167 | |
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| 168 | "-dust") |
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| 169 | dust="$2" ; shift ; shift ;; |
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| 170 | |
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| 171 | "-strataer") |
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| 172 | strataer="$2" ; shift ; shift ;; |
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| 173 | |
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| 174 | "-chimie") |
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| 175 | chimie="$2" ; shift ; shift ;; |
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| 176 | |
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| 177 | "-parallel") |
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| 178 | parallel="$2" ; shift ; shift ;; |
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| 179 | |
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| 180 | "-include") |
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| 181 | INCLUDE="$INCLUDE -I$2" ; shift ; shift ;; |
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| 182 | |
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| 183 | "-cpp") |
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| 184 | CPP_KEY="$CPP_KEY $2" ; shift ; shift ;; |
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| 185 | |
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| 186 | "-adjnt") |
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| 187 | echo "not operational ... work to be done here ";exit |
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| 188 | opt_dep="$opt_dep adjnt" ; adjnt="-ladjnt -ldyn3d " |
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| 189 | optim="$optim -Dadj" ; shift ;; |
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| 190 | |
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| 191 | "-cosp") |
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| 192 | cosp="$2" ; shift ; shift ;; |
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| 193 | |
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| 194 | "-mem") |
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| 195 | paramem="mem" ; shift ;; |
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| 196 | |
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| 197 | "-filtre") |
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| 198 | filtre=$2 ; shift ; shift ;; |
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| 199 | |
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| 200 | "-link") |
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| 201 | LIB="$LIB $2" ; shift ; shift ;; |
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| 202 | |
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| 203 | "-fcm_path") |
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| 204 | fcm_path=$2 ; shift ; shift ;; |
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| 205 | |
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| 206 | "-ext_src") |
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| 207 | EXT_SRC=$2 ; shift ; shift ;; |
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| 208 | |
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| 209 | "-j") |
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| 210 | job=$2 ; shift ; shift ;; |
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| 211 | |
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| 212 | "-full") |
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| 213 | full="-full" ; shift ;; |
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| 214 | |
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| 215 | "-libphy") |
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| 216 | libphy="true" ; shift ;; |
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| 217 | |
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| 218 | "-arch") |
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| 219 | arch=$2 ; arch_defined="TRUE" ; shift ; shift ;; |
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| 220 | |
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| 221 | "-arch_path") |
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| 222 | arch_path=$2 ; arch_path_defined="TRUE"; shift ; shift ;; |
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| 223 | |
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| 224 | *) |
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| 225 | code="$1" ; shift ;; |
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| 226 | esac |
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| 227 | done |
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| 228 | |
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| 229 | ############################################################### |
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| 230 | # path to fcm |
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| 231 | ############################################################### |
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| 232 | # handle case when provided path to fcm was given as a relative |
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| 233 | # path (from makelmdz_fcm script directory) and not an absolute path |
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| 234 | if [[ ${fcm_path:0:1} != "/" ]] ; then |
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| 235 | # prepend with makelmdz_fcm location |
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| 236 | fcm_path=$(cd $(dirname $0) ; pwd)"/"${fcm_path} |
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| 237 | fi |
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| 238 | |
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| 239 | # add fcm_path to PATH |
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| 240 | export PATH=${fcm_path}:${PATH} |
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| 241 | |
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| 242 | echo "Path to fcm:" |
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| 243 | echo ${fcm_path} |
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| 244 | |
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| 245 | ############################################################### |
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| 246 | # lecture des chemins propres à l'architecture de la machine # |
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| 247 | ############################################################### |
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| 248 | rm -f .void_file |
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| 249 | echo > .void_file |
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| 250 | rm -rf .void_dir |
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| 251 | mkdir .void_dir |
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| 252 | |
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| 253 | if [[ "$arch_defined" == "TRUE" ]] |
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| 254 | then |
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| 255 | rm -f arch.path |
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| 256 | rm -f arch.fcm |
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| 257 | rm -f arch.env |
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| 258 | |
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| 259 | if test -f $arch_path/arch-${arch}.path |
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| 260 | then |
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| 261 | ln -s $arch_path/arch-${arch}.path arch.path |
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| 262 | elif test -f $arch_default_path/arch-${arch}.path |
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| 263 | then |
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| 264 | ln -s $arch_default_path/arch-${arch}.path arch.path |
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| 265 | fi |
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| 266 | |
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| 267 | if test -f $arch_path/arch-${arch}.fcm |
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| 268 | then |
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| 269 | ln -s $arch_path/arch-${arch}.fcm arch.fcm |
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| 270 | elif test -f $arch_default_path/arch-${arch}.fcm |
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| 271 | then |
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| 272 | ln -s $arch_default_path/arch-${arch}.fcm arch.fcm |
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| 273 | fi |
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| 274 | |
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| 275 | if test -f $arch_path/arch-${arch}.env |
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| 276 | then |
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| 277 | ln -s $arch_path/arch-${arch}.env arch.env |
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| 278 | elif test -f $arch_default_path/arch-${arch}.env |
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| 279 | then |
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| 280 | ln -s $arch_default_path/arch-${arch}.env arch.env |
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| 281 | else |
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| 282 | ln -s .void_file arch.env |
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| 283 | fi |
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| 284 | # source architecture PATH and ENV files |
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| 285 | source arch.env |
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| 286 | source arch.path |
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| 287 | else |
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| 288 | echo "You must define a target architecture" |
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| 289 | exit 1 |
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| 290 | fi |
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| 291 | |
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| 292 | ######################################################################## |
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| 293 | # Definition des clefs CPP, des chemins des includes et modules |
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| 294 | # et des libraries |
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| 295 | ######################################################################## |
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| 296 | |
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| 297 | if [[ "$compil_mod" == "prod" ]] |
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| 298 | then |
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| 299 | COMPIL_FFLAGS="%PROD_FFLAGS" |
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| 300 | elif [[ "$compil_mod" == "dev" ]] |
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| 301 | then |
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| 302 | COMPIL_FFLAGS="%DEV_FFLAGS" |
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| 303 | elif [[ "$compil_mod" == "debug" ]] |
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| 304 | then |
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| 305 | COMPIL_FFLAGS="%DEBUG_FFLAGS" |
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| 306 | fi |
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| 307 | |
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| 308 | phys_root=$physique |
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| 309 | if [[ "${physique:0:3}" == "lmd" ]] ; then phys_root=lmd ; fi |
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| 310 | if [[ "${physique:0:3}" == "mar" ]] ; then phys_root=mar ; fi |
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| 311 | if [[ "${physique:0:4}" == "mars" ]] ; then phys_root=mars ; fi |
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| 312 | if [[ "${physique:0:3}" == "std" ]] ; then phys_root=std ; fi |
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| 313 | if [[ "${physique:0:5}" == "venus" ]] ; then phys_root=venus ; fi |
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| 314 | if [[ "${physique:0:5}" == "titan" ]] ; then phys_root=titan ; fi |
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| 315 | if [[ "${physique:0:3}" == "dev" ]] ; then phys_root=dev ; fi |
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| 316 | |
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| 317 | if [[ "$physique" != "nophys" ]] |
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| 318 | then |
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| 319 | #We'll use some physics |
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| 320 | CPP_KEY="$CPP_KEY CPP_PHYS" |
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| 321 | if [[ "${phys_root}" == "lmd" ]] |
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| 322 | then |
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| 323 | #For lmd physics, default planet type is Earth |
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| 324 | CPP_KEY="$CPP_KEY CPP_EARTH" |
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| 325 | fi |
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| 326 | # set physics common utilities path |
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| 327 | PHY_COMMON_PATH="${LIBFGCM}/phy_common" |
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| 328 | # set the dyn/phys interface path |
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| 329 | DYN_PHYS_PATH="${LIBFGCM}/dynphy_lonlat" |
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| 330 | DYN_PHYS_SUB_PATH="${LIBFGCM}/dynphy_lonlat/phy${phys_root}" |
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| 331 | fi |
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| 332 | |
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| 333 | if [[ "$filtre" == "filtrez" ]] |
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| 334 | then |
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| 335 | FILTRE_PATH=${LIBFGCM}/$filtre |
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| 336 | fi |
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| 337 | |
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| 338 | if [[ "$chimie" == "INCA" ]] |
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| 339 | then |
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| 340 | CPP_KEY="$CPP_KEY INCA" |
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| 341 | INCLUDE="$INCLUDE -I${INCA_INCDIR}" |
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| 342 | LIB="$LIB -L${INCA_LIBDIR} ${INCA_LIB}" |
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| 343 | fi |
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| 344 | |
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| 345 | if [[ "$couple" != "false" ]] |
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| 346 | then |
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| 347 | if [[ "$couple" == "MPI1" ]] |
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| 348 | then |
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| 349 | CPP_KEY="$CPP_KEY CPP_COUPLE" |
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| 350 | export OASIS_INCDIR=$LMDGCM/../../prism/X64/build/lib/psmile.MPI1 |
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| 351 | export OASIS_LIBDIR=$LMDGCM/../../prism/X64/lib |
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| 352 | INCLUDE="$INCLUDE -I${OASIS_INCDIR}" |
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| 353 | LIB="$LIB -L${OASIS_LIBDIR} ${OASIS_LIB}" |
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| 354 | else |
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| 355 | CPP_KEY="$CPP_KEY CPP_COUPLE CPP_OMCT" |
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| 356 | INCLUDE="$INCLUDE -I${OASIS_INCDIR}" |
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| 357 | LIB="$LIB -L${OASIS_LIBDIR} ${OASIS_LIB}" |
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| 358 | fi |
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| 359 | fi |
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| 360 | |
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| 361 | if [[ "$parallel" != "none" && \ |
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| 362 | ( "$code" == "newstart" || "$code" == "start2archive" ) ]] |
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| 363 | then |
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| 364 | echo "newstart or start2archive utilities should be run in serial!" |
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| 365 | echo " Compile without -parallel [mpi|omp|mpi_omp] option!" |
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| 366 | exit |
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| 367 | fi |
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| 368 | |
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| 369 | if [[ "$parallel" == "mpi" ]] |
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| 370 | then |
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| 371 | CPP_KEY="$CPP_KEY CPP_PARA CPP_MPI" |
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| 372 | PARA_FFLAGS="%MPI_FFLAGS" |
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| 373 | PARA_LD="%MPI_LD" |
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| 374 | elif [[ "$parallel" == "omp" ]] |
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| 375 | then |
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| 376 | CPP_KEY="$CPP_KEY CPP_PARA CPP_OMP" |
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| 377 | PARA_FFLAGS="%OMP_FFLAGS" |
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| 378 | PARA_LD="%OMP_LD" |
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| 379 | elif [[ "$parallel" == "mpi_omp" ]] |
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| 380 | then |
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| 381 | CPP_KEY="$CPP_KEY CPP_PARA CPP_MPI CPP_OMP" |
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| 382 | PARA_FFLAGS="%MPI_FFLAGS %OMP_FFLAGS" |
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| 383 | PARA_LD="%MPI_LD %OMP_LD" |
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| 384 | fi |
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| 385 | |
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| 386 | if [[ ( "$parallel" == "omp" || "$parallel" == "mpi_omp" ) \ |
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| 387 | && "$compil_mod" == "debug" ]] |
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| 388 | then |
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| 389 | echo "Usually, parallelization with OpenMP requires some optimization." |
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| 390 | echo "We suggest switching to \"-dev\"." |
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| 391 | fi |
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| 392 | |
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| 393 | if [ "$veget" = "true" -o "$veget" = "orchidee1.9" -o "$veget" = "orchidee2.0" ] |
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| 394 | then |
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| 395 | #NB: option 'true': for backward compatibility. To be used with ORCHIDEE tag 1.9-1.9.6 |
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| 396 | # For this case, cpp flag ORCHIDEE_NOOPENMP must be added to the makelmdz_fcm arguments |
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| 397 | # option orchidee1.9 : Compile with ORCHIDEE version up to the inclusion of OpenMP in ORCHIDEE : tag 1.9-1.9.5(version AR5)-1.9.6 |
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| 398 | INCLUDE="${INCLUDE} ${ORCHIDEE_INCDIR}" |
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| 399 | CPP_KEY="$CPP_KEY CPP_VEGET" |
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| 400 | # temporary, for Orchidee versions 1.9.* (before openmp activation) |
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| 401 | if [[ "$veget" == "orchidee1.9" ]] ; then |
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| 402 | CPP_KEY="$CPP_KEY ORCHIDEE_NOOPENMP" |
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| 403 | fi |
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| 404 | if [[ "$veget" == "orchidee2.0" ]] ; then |
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| 405 | orch_libs="sechiba parameters stomate parallel orglob orchidee" |
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| 406 | else |
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| 407 | orch_libs="sechiba parameters stomate parallel orglob" |
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| 408 | fi |
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| 409 | LIB="${LIB} -L${ORCHIDEE_LIBDIR} ${ORCHIDEE_LIB}" |
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| 410 | elif [[ "$veget" != "false" ]] ; then |
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| 411 | echo "Option -v $veget does not exist" |
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| 412 | echo "Use ./makelmdz_fcm -h for more information" |
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| 413 | exit |
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| 414 | fi |
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| 415 | |
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| 416 | if [[ "$sisvat" == "true" ]] |
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| 417 | then |
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| 418 | CPP_KEY="$CPP_KEY CPP_SISVAT" |
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| 419 | SISVAT_PATH="$LIBFGCM/%PHYS/sisvat" |
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| 420 | fi |
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| 421 | |
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| 422 | if [[ "$rrtm" == "true" ]] |
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| 423 | then |
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| 424 | CPP_KEY="$CPP_KEY CPP_RRTM" |
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| 425 | RRTM_PATH="$LIBFGCM/%PHYS/rrtm" |
|---|
| 426 | fi |
|---|
| 427 | |
|---|
| 428 | if [[ "$dust" == "true" ]] |
|---|
| 429 | then |
|---|
| 430 | CPP_KEY="$CPP_KEY CPP_Dust" |
|---|
| 431 | DUST_PATH="$LIBFGCM/%PHYS/Dust" |
|---|
| 432 | fi |
|---|
| 433 | |
|---|
| 434 | if [[ "$strataer" == "true" ]] |
|---|
| 435 | then |
|---|
| 436 | CPP_KEY="$CPP_KEY CPP_StratAer" |
|---|
| 437 | STRATAER_PATH="$LIBFGCM/%PHYS/StratAer" |
|---|
| 438 | fi |
|---|
| 439 | |
|---|
| 440 | if [[ $io == ioipsl ]] |
|---|
| 441 | then |
|---|
| 442 | CPP_KEY="$CPP_KEY CPP_IOIPSL" |
|---|
| 443 | INCLUDE="$INCLUDE ${IOIPSL_INCDIR}" |
|---|
| 444 | LIB="$LIB ${IOIPSL_LIBDIR} ${IOIPSL_LIB}" |
|---|
| 445 | elif [[ $io == mix ]] |
|---|
| 446 | then |
|---|
| 447 | # For now, xios implies also using ioipsl |
|---|
| 448 | CPP_KEY="$CPP_KEY CPP_IOIPSL CPP_XIOS" |
|---|
| 449 | INCLUDE="$INCLUDE ${IOIPSL_INCDIR} ${XIOS_INCDIR}" |
|---|
| 450 | LIB="$LIB ${IOIPSL_LIBDIR} ${IOIPSL_LIB} ${XIOS_LIBDIR} ${XIOS_LIB}" |
|---|
| 451 | elif [[ $io == xios ]] |
|---|
| 452 | then |
|---|
| 453 | # For now, xios implies also using ioipsl |
|---|
| 454 | CPP_KEY="$CPP_KEY CPP_IOIPSL CPP_XIOS CPP_IOIPSL_NO_OUTPUT" |
|---|
| 455 | INCLUDE="$INCLUDE ${IOIPSL_INCDIR} ${XIOS_INCDIR}" |
|---|
| 456 | LIB="$LIB ${IOIPSL_LIBDIR} ${IOIPSL_LIB} ${XIOS_LIBDIR} ${XIOS_LIB}" |
|---|
| 457 | fi |
|---|
| 458 | |
|---|
| 459 | if [[ "$cosp" == "true" ]] |
|---|
| 460 | then |
|---|
| 461 | CPP_KEY="$CPP_KEY CPP_COSP" |
|---|
| 462 | COSP_PATH="$LIBFGCM/cosp" |
|---|
| 463 | # LIB="${LIB} -l${LIBPREFIX}cosp" |
|---|
| 464 | fi |
|---|
| 465 | |
|---|
| 466 | # for Titan (but could be used by others as well), there is also "chimtitan" |
|---|
| 467 | if [[ -d ${LIBFGCM}/chim${physique} ]] |
|---|
| 468 | then |
|---|
| 469 | CHEM_PATH="${LIBFGCM}/chim${physique}" |
|---|
| 470 | INCLUDE="$INCLUDE -I${LIBFGCM}/chim${physique}" |
|---|
| 471 | fi |
|---|
| 472 | |
|---|
| 473 | # for Titan add microphysics dependencies |
|---|
| 474 | if [[ -d ${LIBFGCM}/muphy${physique} ]] ; then |
|---|
| 475 | |
|---|
| 476 | # add muphy{physique} to the list of files to compile. |
|---|
| 477 | MUPHY_PATH="${LIBFGCM}/muphy${physique}" |
|---|
| 478 | # For Titan as we embbed some libraries with CPP keys, we define them: |
|---|
| 479 | # -DPREC={32|64|80} real kind precision (32: simple, 64: double, 80: extended double) |
|---|
| 480 | # -DHAVE_NC_FTN=1 (mandatory: for support of NetCDF in lintnd). |
|---|
| 481 | CPP_KEY="$CPP_KEY PREC=64 HAVE_NC_FTN=1" |
|---|
| 482 | if [[ "${physique}" == "titan" ]] ; then |
|---|
| 483 | echo "Yaahh you're about to use YAMMS in a GCM..." |
|---|
| 484 | fi |
|---|
| 485 | fi |
|---|
| 486 | |
|---|
| 487 | # for Venus (but could be used by others as well), there is also "phyvenus/cloudvenus" |
|---|
| 488 | if [[ -d ${LIBFGCM}/phy${physique}/cloud${physique} ]] |
|---|
| 489 | then |
|---|
| 490 | CLOUD_PATH="${LIBFGCM}/phy${physique}/cloud${physique}" |
|---|
| 491 | INCLUDE="$INCLUDE -I${LIBFGCM}/phy${physique}/cloud${physique}" |
|---|
| 492 | fi |
|---|
| 493 | |
|---|
| 494 | # for Mars (but could be used by others as well), there is also "aeronomars" |
|---|
| 495 | if [[ -d ${LIBFGCM}/aerono${physique} ]] |
|---|
| 496 | then |
|---|
| 497 | AERONO_PATH="${LIBFGCM}/aerono${physique}" |
|---|
| 498 | INCLUDE="$INCLUDE -I${LIBFGCM}/aerono${physique}" |
|---|
| 499 | fi |
|---|
| 500 | |
|---|
| 501 | # NETCDF library include/library paths |
|---|
| 502 | INCLUDE="$INCLUDE ${NETCDF_INCDIR}" |
|---|
| 503 | LIB="$LIB ${NETCDF_LIBDIR} ${NETCDF_LIB}" |
|---|
| 504 | |
|---|
| 505 | ######################################################################## |
|---|
| 506 | # calcul du nombre de dimensions |
|---|
| 507 | ######################################################################## |
|---|
| 508 | |
|---|
| 509 | |
|---|
| 510 | dim_full=$dim |
|---|
| 511 | dim=`echo $dim | sed -e 's/[^0-9]/ /g'` |
|---|
| 512 | set $dim |
|---|
| 513 | dimc=$# |
|---|
| 514 | echo calcul de la dimension |
|---|
| 515 | echo dim $dim |
|---|
| 516 | echo dimc $dimc |
|---|
| 517 | |
|---|
| 518 | |
|---|
| 519 | ######################################################################## |
|---|
| 520 | # Gestion des dimensions du modele. |
|---|
| 521 | # on cree ou remplace le fichier des dimensions |
|---|
| 522 | ######################################################################## |
|---|
| 523 | |
|---|
| 524 | cd $LIBFGCM/grid |
|---|
| 525 | if [[ -f dimensions.h ]] |
|---|
| 526 | then |
|---|
| 527 | echo 'ATTENTION: vous etes sans doute en train de compiler le modele par ailleurs' |
|---|
| 528 | echo "Attendez que la premiere compilation soit terminee pour relancer la suivante." |
|---|
| 529 | echo "Si vous etes sur que vous ne compilez pas le modele par ailleurs," |
|---|
| 530 | echo vous pouvez continuer en repondant oui. |
|---|
| 531 | echo "Voulez-vous vraiment continuer?" |
|---|
| 532 | echo "" |
|---|
| 533 | echo "WARNING: you are probably already compiling the model somewhere else." |
|---|
| 534 | echo "Wait until the first compilation is finished before launching this one." |
|---|
| 535 | echo "If you are sure that you are not compiling elsewhere, just answer " |
|---|
| 536 | echo "yes (or 'oui') to the question below to proceed." |
|---|
| 537 | echo "Do you wish to continue?" |
|---|
| 538 | read reponse |
|---|
| 539 | if [[ $reponse == "oui" || $reponse == "yes" ]] |
|---|
| 540 | then |
|---|
| 541 | \rm -f $LIBFGCM/grid/dimensions.h |
|---|
| 542 | else |
|---|
| 543 | exit |
|---|
| 544 | fi |
|---|
| 545 | fi |
|---|
| 546 | |
|---|
| 547 | |
|---|
| 548 | cd $LIBFGCM/grid/dimension |
|---|
| 549 | ./makdim $dim |
|---|
| 550 | if (($? != 0)) |
|---|
| 551 | then |
|---|
| 552 | exit 1 |
|---|
| 553 | fi |
|---|
| 554 | |
|---|
| 555 | cat $LIBFGCM/grid/dimensions.h |
|---|
| 556 | cd $LMDGCM |
|---|
| 557 | |
|---|
| 558 | if [[ "$bands" != "" ]] |
|---|
| 559 | then |
|---|
| 560 | # Generic model, recreate bands.h (IR & VIS bands for radiative transfer) |
|---|
| 561 | bands=$(echo $bands | sed -e 's/[^0-9]/ /g') |
|---|
| 562 | cd $LIBFGCM/phy$physique/bands |
|---|
| 563 | ./makbands $bands |
|---|
| 564 | cat $LIBFGCM/phy$physique/bands.h |
|---|
| 565 | cd $LMDGCM |
|---|
| 566 | fi |
|---|
| 567 | |
|---|
| 568 | if [[ "$scatterers" != "" ]] |
|---|
| 569 | then |
|---|
| 570 | # Generic model, recreate scatterers.h |
|---|
| 571 | cd $LIBFGCM/phy$physique/scatterers |
|---|
| 572 | ./make_scatterers $scatterers |
|---|
| 573 | cat $LIBFGCM/phy$physique/scatterers.h |
|---|
| 574 | cd $LMDGCM |
|---|
| 575 | fi |
|---|
| 576 | |
|---|
| 577 | |
|---|
| 578 | ######################################################################## |
|---|
| 579 | # Differentes dynamiques (3d, 2d, 1d) |
|---|
| 580 | ######################################################################## |
|---|
| 581 | |
|---|
| 582 | dimension=`echo $dim | wc -w` |
|---|
| 583 | echo dimension $dimension |
|---|
| 584 | |
|---|
| 585 | if (( $dimension == 3 )) |
|---|
| 586 | then |
|---|
| 587 | cd $LIBFGCM/grid |
|---|
| 588 | \rm fxyprim.h |
|---|
| 589 | cp -p fxy_${grille}.h fxyprim.h |
|---|
| 590 | #else |
|---|
| 591 | # echo "Probleme dans les dimensions de la dynamique !!" |
|---|
| 592 | # echo "Non reactive pour l'instant !!!" |
|---|
| 593 | fi |
|---|
| 594 | |
|---|
| 595 | if (( $dimension == 1 )) |
|---|
| 596 | then |
|---|
| 597 | ## Sanity check: 1D models should be used in serial |
|---|
| 598 | if [[ $parallel != "none" ]] |
|---|
| 599 | then |
|---|
| 600 | echo "Error: a 1D model should not be compiled with " |
|---|
| 601 | echo " -parallel [mpi|omp|mpi_omp] option!" |
|---|
| 602 | exit |
|---|
| 603 | fi |
|---|
| 604 | CPP_KEY="$CPP_KEY CPP_1D" |
|---|
| 605 | ##in 1D, add dyn3d to include path (because main prog is in physics) |
|---|
| 606 | INCLUDE="$INCLUDE -Ilibf/dyn3d -Ilibf/dyn3d_common" |
|---|
| 607 | ## no filtre in 1d: |
|---|
| 608 | FILTRE_PATH=$LMDGCM/.void_dir |
|---|
| 609 | ## no need to compile all routines in dyn3d_common either: |
|---|
| 610 | DYN_COMMON_PATH=$LMDGCM/.void_dir |
|---|
| 611 | ## no need to compile all routines in dynlmdz_phy... ; |
|---|
| 612 | ## (because key ones are included in 1D main program) |
|---|
| 613 | DYN_PHYS_PATH=$LMDGCM/.void_dir |
|---|
| 614 | DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir |
|---|
| 615 | fi |
|---|
| 616 | |
|---|
| 617 | ###################################################################### |
|---|
| 618 | # Traitement special pour le nouveau rayonnement de Laurent Li. |
|---|
| 619 | # ---> YM desactive pour le traitemement en parallele |
|---|
| 620 | ###################################################################### |
|---|
| 621 | |
|---|
| 622 | #if [[ -f $libf/phy$physique/raddim.h ]] |
|---|
| 623 | #then |
|---|
| 624 | # if [[ -f $libf/phy$physique/raddim.$dimh.h ]] |
|---|
| 625 | #then |
|---|
| 626 | # \rm -f $libf/phy$physique/raddim.h |
|---|
| 627 | # cp -p $libf/phy$physique/raddim.$dimh.h $libf/phy$physique/raddim.h |
|---|
| 628 | # echo $libf/phy$physique/raddim.$dimh.h |
|---|
| 629 | # cat $libf/phy$physique/raddim.h |
|---|
| 630 | # else |
|---|
| 631 | # echo On peut diminuer la taille de l executable en creant |
|---|
| 632 | # echo le fichier $libf/phy$physique/raddim.$dimh.h |
|---|
| 633 | # \cp -p $libf/phy$physique/raddim.defaut.h $libf/phy$physique/raddim.h |
|---|
| 634 | # fi |
|---|
| 635 | #fi |
|---|
| 636 | |
|---|
| 637 | ###################################################################### |
|---|
| 638 | # Gestion du filtre qui n'existe qu'en 3d. |
|---|
| 639 | ###################################################################### |
|---|
| 640 | |
|---|
| 641 | if (( `expr $dimc \> 2` == 1 )) |
|---|
| 642 | then |
|---|
| 643 | filtre="FILTRE=$filtre" |
|---|
| 644 | else |
|---|
| 645 | filtre="FILTRE= L_FILTRE= " |
|---|
| 646 | fi |
|---|
| 647 | echo MACRO FILTRE $filtre |
|---|
| 648 | |
|---|
| 649 | echo $dimc |
|---|
| 650 | |
|---|
| 651 | |
|---|
| 652 | |
|---|
| 653 | ###################################################################### |
|---|
| 654 | # Creation du suffixe de la configuration |
|---|
| 655 | ###################################################################### |
|---|
| 656 | |
|---|
| 657 | |
|---|
| 658 | SUFF_NAME=_${dim_full} |
|---|
| 659 | SUFF_NAME=${SUFF_NAME}_phy${physique} |
|---|
| 660 | |
|---|
| 661 | if [[ "$parallel" != "none" ]] |
|---|
| 662 | then |
|---|
| 663 | SUFF_NAME=${SUFF_NAME}_para |
|---|
| 664 | DYN=dyn${dimc}d${paramem} |
|---|
| 665 | if [[ "$paramem" == "mem" ]] |
|---|
| 666 | then |
|---|
| 667 | SUFF_NAME=${SUFF_NAME}_${paramem} |
|---|
| 668 | fi |
|---|
| 669 | else |
|---|
| 670 | SUFF_NAME=${SUFF_NAME}_seq |
|---|
| 671 | if (( $dimension == 1 )) |
|---|
| 672 | then |
|---|
| 673 | # dynamics-related routines in"dyn1d" subdirectory of phy${physique} |
|---|
| 674 | DYN=phy${physique}/dyn1d |
|---|
| 675 | else |
|---|
| 676 | DYN=dyn${dimc}d |
|---|
| 677 | fi |
|---|
| 678 | fi |
|---|
| 679 | |
|---|
| 680 | if [[ $veget != "false" ]] |
|---|
| 681 | then |
|---|
| 682 | SUFF_NAME=${SUFF_NAME}_orch |
|---|
| 683 | fi |
|---|
| 684 | |
|---|
| 685 | if [[ $couple != "false" ]] |
|---|
| 686 | then |
|---|
| 687 | SUFF_NAME=${SUFF_NAME}_couple |
|---|
| 688 | fi |
|---|
| 689 | |
|---|
| 690 | if [[ $chimie == "INCA" ]] |
|---|
| 691 | then |
|---|
| 692 | SUFF_NAME=${SUFF_NAME}_inca |
|---|
| 693 | fi |
|---|
| 694 | |
|---|
| 695 | if [[ $libphy == "true" ]] |
|---|
| 696 | then |
|---|
| 697 | # special case where we compile only the physics |
|---|
| 698 | DYN=$LMDGCM/.void_dir |
|---|
| 699 | DYN_COMMON_PATH=$LMDGCM/.void_dir |
|---|
| 700 | FILTRE_PATH=$LMDGCM/.void_dir |
|---|
| 701 | DYN_PHYS_PATH=$LMDGCM/.void_dir |
|---|
| 702 | DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir |
|---|
| 703 | #and there is no main program to generate |
|---|
| 704 | code="" |
|---|
| 705 | SUFF_NAME="" |
|---|
| 706 | else |
|---|
| 707 | SUFF_NAME=${SUFF_NAME}.e |
|---|
| 708 | fi |
|---|
| 709 | |
|---|
| 710 | cd $LMDGCM |
|---|
| 711 | config_fcm="config.fcm" |
|---|
| 712 | rm -f $config_fcm |
|---|
| 713 | touch $config_fcm |
|---|
| 714 | rm -f bin/${code}${SUFF_NAME}.e |
|---|
| 715 | rm -f arch.fcm |
|---|
| 716 | rm -f arch.opt |
|---|
| 717 | |
|---|
| 718 | echo "%ARCH $arch" >> $config_fcm |
|---|
| 719 | echo "%INCDIR $INCLUDE" >> $config_fcm |
|---|
| 720 | echo "%LIB $LIB" >> $config_fcm |
|---|
| 721 | echo "%ROOT_PATH $PWD" >> $config_fcm |
|---|
| 722 | echo "%LIBF $LIBFGCM" >> $config_fcm |
|---|
| 723 | echo "%LIBO $LIBOGCM" >> $config_fcm |
|---|
| 724 | echo "%DYN $DYN" >> $config_fcm |
|---|
| 725 | echo "%DYN_COMMON $DYN_COMMON_PATH" >> $config_fcm |
|---|
| 726 | echo "%PHY_COMMON $PHY_COMMON_PATH" >> $config_fcm |
|---|
| 727 | echo "%FILTRE $FILTRE_PATH" >> $config_fcm |
|---|
| 728 | echo "%PHYS phy${physique}" >> $config_fcm |
|---|
| 729 | echo "%DYN_PHYS $DYN_PHYS_PATH" >> $config_fcm |
|---|
| 730 | echo "%DYN_PHYS_SUB $DYN_PHYS_SUB_PATH" >> $config_fcm |
|---|
| 731 | echo "%RRTM $RRTM_PATH" >> $config_fcm |
|---|
| 732 | echo "%DUST $DUST_PATH" >> $config_fcm |
|---|
| 733 | echo "%STRATAER $STRATAER_PATH" >> $config_fcm |
|---|
| 734 | echo "%SISVAT $SISVAT_PATH" >> $config_fcm |
|---|
| 735 | echo "%COSP $COSP_PATH" >> $config_fcm |
|---|
| 736 | echo "%CHEM $CHEM_PATH" >> $config_fcm |
|---|
| 737 | echo "%CLOUD $CLOUD_PATH" >> $config_fcm |
|---|
| 738 | echo "%MUPHY $MUPHY_PATH" >> $config_fcm |
|---|
| 739 | echo "%AERONO $AERONO_PATH" >> $config_fcm |
|---|
| 740 | echo "%CPP_KEY $CPP_KEY" >> $config_fcm |
|---|
| 741 | echo "%EXEC $code" >> $config_fcm |
|---|
| 742 | echo "%SUFF_NAME $SUFF_NAME" >> $config_fcm |
|---|
| 743 | echo "%COMPIL_FFLAGS $COMPIL_FFLAGS" >> $config_fcm |
|---|
| 744 | echo "%PARA_FFLAGS $PARA_FFLAGS" >> $config_fcm |
|---|
| 745 | echo "%PARA_LD $PARA_LD" >> $config_fcm |
|---|
| 746 | echo "%EXT_SRC $EXT_SRC" >> $config_fcm |
|---|
| 747 | |
|---|
| 748 | |
|---|
| 749 | |
|---|
| 750 | ln -s arch/arch-${arch}.fcm arch.fcm |
|---|
| 751 | if test -f arch/arch-${arch}.opt && [ $compil_mod = "prod" ] |
|---|
| 752 | then |
|---|
| 753 | ln -s arch/arch-${arch}.opt arch.opt |
|---|
| 754 | else |
|---|
| 755 | ln -s .void_file arch.opt |
|---|
| 756 | fi |
|---|
| 757 | |
|---|
| 758 | |
|---|
| 759 | rm -f $LIBOGCM/${arch}${SUFF_NAME}/.config/fcm.bld.lock |
|---|
| 760 | ./build_gcm ${fcm_path} -j $job $full |
|---|
| 761 | |
|---|
| 762 | rm -rf tmp_src |
|---|
| 763 | rm -rf config |
|---|
| 764 | ln -s $LIBOGCM/${arch}${SUFF_NAME}/.config config |
|---|
| 765 | ln -s $LIBOGCM/${arch}${SUFF_NAME}/.config/ppsrc tmp_src |
|---|
| 766 | |
|---|
| 767 | |
|---|
| 768 | if [[ -r $LIBFGCM/grid/dimensions.h ]] |
|---|
| 769 | then |
|---|
| 770 | # Cleanup: remove dimension.h file |
|---|
| 771 | \rm -f $LIBFGCM/grid/dimensions.h |
|---|
| 772 | fi |
|---|
