Changeset 5429 for BOL/LMDZ_Setup/script_SIMU

Timestamp:

Dec 19, 2024, 10:19:22 AM (5 weeks ago)

Author:

fhourdin

Message:

Improving geting files from ​http://... + README0

File:

• BOL/LMDZ_Setup/script_SIMU (modified) (2 diffs)

BOL/LMDZ_Setup/script_SIMU

@@ -226 +226 @@
   fi
 
-  # Rapatriement des fichiers pour SPLA.
-  # AFAIRE : si le wget marche de toutes les machines, enlever le wget_pub equivalent dans setup.sh
-  #          et le faire automatiquement dans ln_from_pub
   if [[ $aerosols = "spla" ]]; then
-    for file in donnees_lisa.nc SOILSPEC.data                                    \
-         cly.dat $( for i in $(seq 1 12 ) ; do echo dust$i.nc ; done ) wth.dat   \
-         carbon_emissions.nc sulphur_emissions_antro.nc sulphur_emissions_nat.nc \
-         sulphur_emissions_volc.nc  ; do
-             ln_from_pub 3DInputData/SPLA_WA/emissions $file
-    done
+    get_input_files ln_from_pub SPLA_WA/emissions
     ln -s dust$mo.nc dust.nc
-
     # Le calcul d'emissions de sels marins utilise les vents ERA-10m interpoles sur grille_s (lonv,latu) avec le script era2gcm_uv10m.sh
     # NB : GET=ln -s ; ERA10mDIR contient lui-meme le lien ERA10m vers le repertoire des vents interpoles $REA_uv10m (REA=ERA5, ERAI ou OPERA) 
+    echo WORK IN PROGRESS FOR SPLA ; exit 1
     ventl="u10m.nc v10m.nc"
     for file in $ventl ; do ${GET} $ERA10mDIR/${year}/${month}/$file . ; done
@@ -258 +250 @@
 
 if [ $VEGET = y ] ; then
+
     set +e ; for t in stomate sechiba ; do cp $SIMUDIR/start_$t.$ym.nc ${t}_rest_in.nc ; done ; set -e
-    if [ "`grep RIVER_ROUTING orchidee.def |grep -i y`" ] ; then
-      set +e 
-      for file in routing_simple.nc routing.nc ; do
-          ln_from_pub 3DInputData/Orchideee routing.nc
-      done
-      cp $SIMUDIR/start_routing.$ym.nc routing_start.nc
-      set -e
-    fi
-
-#For Orchidee trunk (post-CMIP6), orchidee_pft.def must be copied in addition to orchidee.def 
+    #For Orchidee trunk (post-CMIP6), orchidee_pft.def must be copied in addition to orchidee.def 
     \cp -f DEF/orchidee*.def .
 
-# Test sur sechiba_rest_in.nc, 
-#  supposant que les restarts pour sechiba, stomate, et routing le cas echeant, 
-#  sont soit tous dispo, soit tous absents
+    # If no sechiba restart is found, the restart files for sechiba, stomate, 
+    # and routing are created on line in the simulation, requiring Orchidee input files
     if [ ! -f sechiba_rest_in.nc ] ; then
-       echo '#########################################################'
-       echo "Autoinitialisation d'orchidee au besoin"
-       echo '#########################################################'
-       for file in cartepente2d_15min.nc \
-          lai2D.nc soils_param.nc soil_bulk_and_ph.nc alb_bg_modisopt_2D_ESA_v2.nc reftemp.nc ; do
-          ln_from_pub 3DInputData/Orchidee $file
-       done
+
+       get_input_files ln_from_pub Orchidee # linking all orchidee input files
+
        ln -sf alb_bg_modisopt_2D_ESA_v2.nc alb_bg.nc
-
        echo ATTENTION : ON UTILISE LES FICHIERS DE L ANNEE 2000
-       ln_from_pub 3DInputData/Orchidee PFTmap_15PFT.v1_2000.nc ; ln -s PFTmap_15PFT.v1_2000.nc PFTmap.nc
-       ln_from_pub 3DInputData/Orchidee woodharvest_2000.nc ; ln -s woodharvest_2000.nc woodharvest.nc
-
+       ln -s PFTmap_15PFT.v1_2000.nc PFTmap.nc
+       ln -s woodharvest_2000.nc woodharvest.nc
        sed -e 's/^SECHIBA_restart_in.*./SECHIBA_restart_in=NONE/' \
            -e 's/^STOMATE_RESTART_FILEIN.*./STOMATE_RESTART_FILEIN=NONE/' \
            -i orchidee.def
-
-      if [ $veget = 7994 ] ; then
-         for file in ndep_nhx.nc ndep_noy.nc nfert_cropland.nc nfert_pasture.nc nmanure_cropland.nc nmanure_pasture.nc bnf.nc ; do
-            ln_from_pub 3DInputData/Orchidee $file
-         done
-      fi
-
+    fi
+
+    # Input files for routing are always needed
+    if [ "`grep RIVER_ROUTING orchidee.def |grep -i y`" ] ; then
+      set +e 
+      ln_from_pub 3DInputData/Orchideee routing.nc
+      ln_from_pub 3DInputData/Orchideee routing_simple.nc
+      cp $SIMUDIR/start_routing.$ym.nc routing_start.nc
+      set -e
     fi