Changeset 4993 for BOL/LMDZ_Setup_amaury/lmdz_env.sh

Timestamp:

Jun 25, 2024, 4:52:40 PM (3 months ago)

Author:

abarral

Message:

add ecrad physics check
change ecrad data path
update lmdz_env for adastra
update DEF/namelist_ecrad

File:

• BOL/LMDZ_Setup_amaury/lmdz_env.sh (modified) (2 diffs)

BOL/LMDZ_Setup_amaury/lmdz_env.sh

@@ -70 +70 @@
     adast)
       module purge
-  #    module load PrgEnv-gnu
-  #    module load cray-hdf5-parallel
-  #    module load netcdf-hdf5parallel/gnu/10.3
+      module load PrgEnv-gnu
+      module load gcc/13.2.0  # required, see https://dci.dci-gitlab.cines.fr/webextranet/user_support/index.html#prgenv-and-compilers
+
+      function cdo {  # cdo is available as a spack cmd which requires a specific, incompatible env
+        unset cdo
+        module purge
+        module load GCC-CPU-3.1.0
+        /opt/software/gaia-external/CPU/cdo-2.4.0/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_placeholder__/__spa/cdo-2.4.0-gcc-12.1-b3qr/bin/cdo "$@"
+        set_env
+      }
+
+      function ferret {
+        unset ferret
+        module purge
+        module load GCC-CPU-3.1.0
+        module load ferret
+        ferret "$@"
+        set_env
+      }
 
       account=$(/usr/sbin/my_project.py -l 2>&1 | head -1 | cut -d " " -f 3- | cut -c 5-)
@@ -80 +96 @@
       LMDZD="$root_dir/LMDZD"
       LMDZ_INIT="$root_dir/LMDZ_Init"
-      NB_MPI_MAX=20  # TODO 2000 in JZ
-      NB_OMP_MAX=2  # TODO 20 in JZ
-      RUNCMD="srun --label --account=$account -n"
-      SUBMITCMD="sbatch --account=$account"
+      NB_MPI_MAX=1  # TODO 2000 in JZ
+      NB_OMP_MAX=1  # TODO 20 in JZ
+      RUNCMD="srun --label --account=$account --constraint=GENOA -n"
+      SUBMITCMD="sbatch --constraint=GENOA --account=$account"
       ;;
     *) echo "WARNING: RUNNING THIS SCRIPT ON A LOCAL COMPUTER IS DISCOURAGED (lackluster cpus and memory)"