Changeset 4991 for BOL/LMDZ_Setup_amaury/main.sh

Timestamp:

Jun 20, 2024, 7:22:04 PM (3 months ago)

Author:

abarral

Message:

Improve docs
Fix bug on sequential sim when running locally
Fix crash when running init without slurm (ce0l w/o OMP_NUM_THREADS=1)
Fix crash for climato=0 due to missing limit.nc

File:

• BOL/LMDZ_Setup_amaury/main.sh (modified) (4 diffs)

BOL/LMDZ_Setup_amaury/main.sh

@@ -4 +4 @@
 
 #####################################################################
-# This script manages the call to setup.sh
-#
 # Authors :
 # F. Hourdin, frederic.hourdin@lmd.ipsl.fr
 # Modified A. Sima, adriana.sima@lmd.ipsl.fr
+# Rewritten 2024 A. Barral
 #
-# Some options can only be changed directly in lmdz_env.sh or setup.sh
-# --> In setup.sh :
-# * Orchidee version, to be defined through "veget" option
-#   default : OR-CMIP6
-# * Aerosol forcing, to be defined through "aerosols" option :
-#   n (no, default) / clim (an2000)/ spla (interactive dust and sea salt)
-#   !!! STRONG recommendation : experiments with DIFFERENT Orchidee or aerosol options
-#   !!!   should be performed in DIFFERENT TEST_PROD folders 
-#   !!!  (especially as they may need different initial files) 
-#  * Use or not of the RRTM radiation code : rrtm=true/false
-#  * Compiling options : debug, use or not of the fcm makefile
+# This is the main user script of LMDZ_Setup. It defines basic options for the simulations, and runs setup.sh.
+# Settings such as model and simulation paths are set in lmdz_env.sh. You must modify it to set the current LMDZ_Setup path as <root_dir>.
+# Expert options are set directly in setup.sh via <define_expert_options>.
 #
-# --> In lmdz_env.sh :
-# * Model & configuration setup
-#    If you install the present tutorial_prod package in $STORE/your_folder instead of $STORE
-#       modify STORED variable accordingly
-#    The model will be installed in $LMDZD directory defined in lmdz_env.sh
-#      Default : LMDZD=$WORK; can be changed in LMDZD=$WORK/Your_directory
-#    To use a model already installed (and compiled), by you or someone else (check the acces!):
-#       set LMDZD=path_to_model_to_use
-#       You'll also need to (re)define "LMDZname" accordingly, in setup.sh 
+# Some expert options in setup.sh :
+# * Orchidee version, through the "veget" option
+# * Aerosol forcing, through the "aerosols" option
+# * Radiation code, through the "rad" option
+# * Compilation options (debug, netcdf)
 #####################################################################
 
@@ -39 +26 @@
 # Version of the tar file on https://lmdz.lmd.jussieu.fr/pub/src
 # Last "testing" version, thoroughly checked by the LMDZ team : contains LMDZ rev 4729 (2023-10-22)
-# TODO move to expert-level settings ?
 version="20240308.trunk" #!! DON'T CHANGE IT WITHOUT CHECKING WITH LMDZ TEAM !!
 svn=""                   #!! DON'T CHANGE IT WITHOUT CHECKING WITH LMDZ TEAM !!
-        # CONTACT LMDZ Team :
-        #       email: poihl@listes.lmd.ipsl.fr
-        #       Mattermost: https://mattermost.lmd.ipsl.fr/lmdz/channels/installation-et-tutoriels
+# CONTACT LMDZ Team :
+#       email: poihl@listes.lmd.ipsl.fr
+#       Mattermost: https://mattermost.lmd.ipsl.fr/lmdz/channels/installation-et-tutoriels
 
 # Grid number of points IMxJMxLM
@@ -50 +36 @@
 resol="32x32x39"  # TODO TEMP
 
-# Using XIOS for IOs: "-xios" for enabled, else ""
+## Using XIOS for IOs: "-xios" (enabled) / "" (disabled)
 xios=""
-# TODO Amaury: je pensais que l'idée de main.sh c'était de mettre des paramètres qu'on peut changer en recompilant uniquement lmdz. Or ce n'est pas le cas d'XIOS...
 
-# Using or not the Cosp simulator: "-cosp" for enabled, else ""
+# Using or not the Cosp simulator: "-cosp" (enabled) / "" (disabled)
 cosp=""
 
-# Choice of physics (default : "lmd" for "phylmd" )
-#   Examples : lmd_phys="new" to compile with phynew instead of phylmd,
-#              lmd_phys="lmdiso" to run with Isotopes 
+# Choice of physics: "lmd" (phylmd) / "new" (phynew) / "lmdiso" (isotopes)
 lmd_phys="lmd"
 
@@ -78 +61 @@
 
 # Nudging: Can only be activated with climato=0 and freq=mo
-# ="-nudging" for enabled, else ""
+# "-nudging" (enabled) / "" (disabled)
 nudging=""
 #If using nudging, then check DEF/guide.def :