#! /bin/bash

#------------------------------
# makeles
#------------------------------
#     MMM must be defined
#------------------------------
# A. Spiga 01/2009
#------------------------------


echo "Use -n if you don't want to recompile physics"
echo "Use -p if you want the new LMD physics"

#
# SPECIAL CICLAD
#

donotcompilephys=0
phys=""
while getopts "np" options; do
  case $options in
   n ) donotcompilephys=1;; ## do not recompile physics
   p ) phys="newphys_";;    ## with new physics
  esac
done

#
# LOCATIONS
#
here=$PWD
whereliblmd=$here


##############################################################
##############################################################
if [ ${donotcompilephys} -eq 0 ]
then

#
# COMPILE PHYSICS
#
cd $MMM
  if [[ "${phys}" == "newphys_" ]]
  then
    makemeso -j -p
  else
    makemeso -j
  fi 
#
#makemeso -rd < last > /dev/null
folder=$PWD'/'$(more what_folder)'/WRFV2/'
libphys_folder=$folder'mars_lmd/libo/'
phymars_folder=$folder'mars_lmd/libf/phymars/'
\rm what_folder 2> /dev/null

#
# GET liblmd GENERATED LIBRARY and INCLUDEs
#
echo $libphys_folder
cp -rf ${libphys_folder}/liblmd.a ${whereliblmd}/
#cp -rf ${phymars_folder}/dimphys.h ${here}/modif_mars/
cp -rf ${phymars_folder}/dimphys.h ${here}/mars_lmd/libf/phymars/
#cp -rf ${folder}/call_meso_inifis.inc ${here}/modif_mars/
#cp -rf ${folder}/call_meso_physiq.inc ${here}/modif_mars/
cp -rf ${folder}/call_meso_inifis.inc ${here}/
cp -rf ${folder}/call_meso_physiq.inc ${here}/
#cp -rf ${folder}/inc/module_lmd_driver_output*.inc ${here}/modif_mars/
cp -rf ${folder}/inc/module_lmd_driver_output*.inc ${here}/inc/
#cp -rf ${phymars_folder}/wrf_output_2d.h ${here}/modif_mars/
#cp -rf ${phymars_folder}/wrf_output_3d.h ${here}/modif_mars/
cp -rf ${phymars_folder}/wrf_output_2d.h ${here}/mars_lmd/libf/phymars/
cp -rf ${phymars_folder}/wrf_output_3d.h ${here}/mars_lmd/libf/phymars/
fi
##############################################################
##############################################################


cd $here

##------------------------------
##------------------------------
##
## MPI (dm) 64 bits 
##
##TODO: le rendre adapte aux reponses du user a makemeso
touch conf
echo 3 >> conf 
##echo 4 >> conf  #openMP n'arrange pas beaucoup de le tps de calcul
echo 1 >> conf
##------------------------------
##------------------------------



### SINGLE PROC 32 bits g95
#touch conf
#echo 5 >> conf
#echo 0 >> conf

## SINGLE PROC 64 bits
#touch conf
#echo 1 >> conf
#echo 0 >> conf

### MPI (dm) 64 bits IFORT
#echo IFORT IFORT IFORT IFORT
#touch conf
#echo 7 >> conf
#echo 1 >> conf


#
# CONFIGURE
#
echo "configure..."
#touch configure.wrf
\rm configure.wrf
./configure < conf > /dev/null 2> /dev/null
#./configure 
#sed s+"-lnetcdf"+"-lnetcdf -L$whereliblmd -llmd"+g configure.wrf | sed s+'mpif90 -f90=$(SFC)'+'/usr/lib64/openmpi/1.2.8-pgf/bin/mpif90'+g | sed s+'mpicc -cc=$(SCC)'+'/usr/lib64/openmpi/1.2.8-gcc/bin/mpicc -DMPI2_SUPPORT'+g > yeah
## WHERE_MPI must be defined
sed s+"-lnetcdf"+"-lnetcdf -L$whereliblmd -llmd"+g configure.wrf | sed s+"mpif90"+"$WHERE_MPI/mpif90"+g | sed s+"mpicc"+"$WHERE_MPI/mpicc -DMPI2_SUPPORT"+g > yeah
#sed s+"# -g"+"-fno-second-underscore # -g"+g configure.wrf | sed s+"-lnetcdf"+"-lnetcdf -L$whereliblmd -llmd"+g > yeah
#sed s+"-lnetcdf"+"-lnetcdf -L$whereliblmd -llmd"+g configure.wrf | sed s+"#-g"+"-g"+g > yeah
#sed s+"-lnetcdf"+"-lnetcdf -L$whereliblmd -llmd"+g configure.wrf > yeah
mv yeah configure.wrf

	####
	#### provoque des seg faults....
	####
	#sed s+"-fastsse"+"-fastsse -mcmodel=medium -Mlarge_arrays"+g configure.wrf > yeah
	#### TEST TEST
	#mv yeah configure.wrf

sed s+"-fastsse"+" "+g configure.wrf > yeah
#sed s+"-fastsse"+"-mcmodel=medium -Mlarge_arrays"+g configure.wrf > yeah ##marche pas
#
# sometimes fastsse is problematic
#

##sed s+"-fastsse"+"-fastsse -mcmodel=medium"+g configure.wrf > yeah
mv yeah configure.wrf

#sed s+"-Mvect=noaltcode"+"#-Mvect=noaltcode"+g configure.wrf > yeah ; mv yeah configure.wrf

#sed s+"-mp -Minfo=mp"+"-mp -Minfo=mp -mp=nonuma"+g configure.wrf > yeah
#mv yeah configure.wrf

#### OBLIGATOIRE POUR IFORT, OK AVEC LES AUTRES ??? a priori oui
sed s+"-llmd"+"-llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah
mv yeah configure.wrf

#############################################################
  if [[ "${phys}" == "newphys_" ]]
  then
     sed s+"ARCH_LOCAL      =       "+"ARCH_LOCAL      =       -DNEWPHYS "+g configure.wrf > yeah
     mv -f yeah configure.wrf
  fi
#############################################################


\rm conf

#
# COMPILE LES TEST CASE w/ LMD PHYSICS
#
touch modif_mars/module_lmd_driver.F
\rm log_compile
\rm log_error
echo "compile LES WRF with LMD Mars physics... look log_compile and log_error"
compile em_les > log_compile 2> log_error

echo '***********************************'
tail -n 20 log_error