Index: trunk/LMDZ.PLUTO/util/startarchive2icosa/compile
===================================================================
--- trunk/LMDZ.PLUTO/util/startarchive2icosa/compile	(revision 3545)
+++ trunk/LMDZ.PLUTO/util/startarchive2icosa/compile	(revision 3567)
@@ -1,10 +1,14 @@
 #!/usr/bin/bash
 
-LMDZ=${LMDZ:-../../..} # change to your LMDZ install dir
+# change to your LMDZ install dir or set "export LMDZ=/path/lmdz" in your .bashrc
+LMDZ=${LMDZ:-../../..}
 
 source $LMDZ/XIOS/arch.env
 source $LMDZ/XIOS/arch.path
 
-mpif90 -g -traceback start_archive2icosa.f90 \
+FLAGS="-g -traceback"
+FLAGS=
+
+mpif90 $FLAGS start_archive2icosa.f90 \
 $NETCDF_INCDIR $NETCDF_LIBDIR $NETCDF_LIB \
 $HDF5_INCDIR $HDF5_LIBDIR $HDF5_LIB \
@@ -13,5 +17,5 @@
 -o start_archive2icosa.e
 
-mpif90 -g -traceback rearrange_startphy.f90 \
+mpif90 $FLAGS rearrange_startphy.f90 \
 $NETCDF_INCDIR $NETCDF_LIBDIR $NETCDF_LIB \
 $HDF5_INCDIR $HDF5_LIBDIR $HDF5_LIB \
@@ -20,5 +24,5 @@
 -o rearrange_startphy.e
 
-#mpif90 -g -traceback rearrange_startphy_tsurf_cst.f90 \
+#mpif90 $FLAGS rearrange_startphy_tsurf_cst.f90 \
 #$NETCDF_INCDIR $NETCDF_LIBDIR $NETCDF_LIB \
 #$HDF5_INCDIR $HDF5_LIBDIR $HDF5_LIB \
Index: trunk/LMDZ.PLUTO/util/startarchive2icosa/icosa_finalize.bash
===================================================================
--- trunk/LMDZ.PLUTO/util/startarchive2icosa/icosa_finalize.bash	(revision 3545)
+++ trunk/LMDZ.PLUTO/util/startarchive2icosa/icosa_finalize.bash	(revision 3567)
@@ -7,8 +7,13 @@
 # load nco module
 module purge
-LMDZ=${LMDZ:-../trunk/}  #You have to adapt to your own path, can be in your bashrc
+# change to your LMDZ install dir or set "export LMDZ=/path/lmdz" in your .bashrc
+LMDZ=${LMDZ:-../../..}
 source $LMDZ/XIOS/arch.env
 #module load nco/4.7.9-gcc-4.8.5-hdf5-1.8.18-openmpi-2.0.4 #Example of version of the module needed
 module load nco
+
+# save start*nc from lmdz grid
+mkdir -p lmdz_starts
+cp start.nc startfi.nc lmdz_starts
 
 #conversion to netcdf 3 in order to rename and add variables, not properly done with netcdf4 files
@@ -58,2 +63,10 @@
 # cleanup
 rm -rf startphy_icosa_nc3.nc startphy_nc3.nc
+
+# copy icosa start files in icosa_starts folder
+mkdir -p icosa_starts
+mv start_icosa.nc icosa_starts/start.nc
+mv startfi.nc icosa_starts/startfi.nc
+
+# get back start files from lmdz grid
+cp lmdz_starts/* .
Index: trunk/LMDZ.PLUTO/util/startarchive2icosa/job_start_archive_2icosa
===================================================================
--- trunk/LMDZ.PLUTO/util/startarchive2icosa/job_start_archive_2icosa	(revision 3545)
+++ trunk/LMDZ.PLUTO/util/startarchive2icosa/job_start_archive_2icosa	(revision 3567)
@@ -10,5 +10,5 @@
 #SBATCH --output %x.%j.out
 
-arch=ifort_MESOIPSL
+arch=${ARCH:-ifort_MESOIPSL}
 source $HOME/lmdz/LMDZ.COMMON/arch/arch-$arch.env