Index: trunk/MESOSCALE/LMD_MM_MARS/SIMU/callphys.def
===================================================================
--- trunk/MESOSCALE/LMD_MM_MARS/SIMU/callphys.def	(revision 223)
+++ trunk/MESOSCALE/LMD_MM_MARS/SIMU/callphys.def	(revision 223)
@@ -0,0 +1,92 @@
+General options
+~~~~~~~~~~~~~~~
+tracer    (Run with or without tracer transport ?)
+F
+diurnal   (Diurnal cycle ?  if diurnal=F, diurnal averaged solar heating)
+T
+season    (Seasonal cycle ? if season=F, Ls stays constant like in "start")
+T
+lwrite    (want some more output on the screen ?) 
+F
+stats     (Saving statistics in file "cumul" ?)
+F
+calleofdump (Saving EOF profiles in file "profiles" for Climate Database ?)
+F
+Dust scenario. Used if the dust is prescribed (i.e. if tracer=F or active=F)
+~~~~~~~~~~~~~
+iaervar  (=1 Dust opt.deph read in startfi; =2 Viking scenario; =3 MGS scenario 
+4        (=4 Mars Year 24 from TES assimilation)
+iddist  (Dust vertical distribution: =0: old distrib. (Pollack90) 
+3       (=1: top set by "topdustref"; =2: Viking scenario; =3 MGS scenario )
+topdustref (Dust top altitude (km). Matter only if iddist=1)
+55.
+Physical Parameterizations :
+~~~~~~~~~~~~~~~~~~~~~~~~~~
+callrad   (call radiative transfer ?)
+T
+callnlte (call NLTE radiative schemes ?   matter only if callrad=T)
+F
+callnirco2 (call CO2 NIR absorption ?   matter only if callrad=T)
+T
+calldifv  (call turbulent vertical diffusion ?)
+T
+calladj   (call convective adjustment ?)
+F 
+callcond  (call CO2 condensation ?)
+T
+callsoil  (call thermal conduction in the soil ?)
+T
+calllott  (call Lott's gravity wave/subgrid topography scheme ?)
+F
+Radiative transfer options :
+~~~~~~~~~~~~~~~~~~~~~~~~~~
+iradia    (the rad.transfer is computed every "iradia" physical timestep)
+10
+callg2d   (Output of the exchange coefficient mattrix ? for diagnostic only)
+F
+rayleigh  (Rayleigh scattering : should be =F for now)
+F
+Tracer (dust water, ice and/or chemical species) options (use if tracer=T) :
+~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+dustbin    (DUST: Transported dust ? (if >0, uses q(1) to q(dustbin))
+0
+active     (DUST: Radiatively active dust ? (uses q(1) to q(dustbin))
+F
+doubleq    (DUST: needs dustbin=1, use mass q(1) and nb q(2) mr to predict dust size ?)
+F
+lifting    (DUST: lifted by GCM surface winds ?)
+F
+dustdevil  (DUST: lifted by dust devils ?)
+F
+scavenging (DUST: Scavenging by CO2 snowfall ?)
+F
+sedimentation (DUST/WATERICE: Gravitationnal sedimentation ?)
+F
+iceparty   (WATERICE: Water cycle includes water ice mixing ratio q(nqmx-1))
+F
+activice   (WATERICE: Radiatively active transported atmospheric water ice ?)
+F
+water      (WATER: Compute water cycle using q(nqmx) )
+F
+caps       (WATER: put the current permanent caps at both poles)
+F
+photochem  (PHOTOCHEMISTRY: chemical species included)
+F
+Thermospheric options (relevant if tracer=T) :
+~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+callthermos  (call thermosphere ?)
+F
+thermoswater  (WATER: included without cycle	only if water=F)
+F
+callconduct  (call thermal conduction ?     matter only if callthermos=T)
+F
+calleuv  (call EUV heating ?                matter only if callthermos=T)
+F
+callmolvis  (call molecular viscosity ?     matter only if callthermos=T)
+F
+callmoldiff  (call molecular diffusion ?    matter only if callthermos=T)
+F
+thermochem  (call thermospheric photochemistry ?  matter only if callthermos=T)
+F
+solarcondate (date for solar flux calculation: 1985 < date < 2002))
+1993.4       (Solar min=1996.4 ave=1993.4 max=1990.6)
Index: trunk/MESOSCALE/LMD_MM_MARS/SIMU/namelist.input_full
===================================================================
--- trunk/MESOSCALE/LMD_MM_MARS/SIMU/namelist.input_full	(revision 217)
+++ trunk/MESOSCALE/LMD_MM_MARS/SIMU/namelist.input_full	(revision 223)
@@ -17,11 +17,8 @@
  io_form_boundary = 2        !! (*) Choice of NETCDF for ouputs
  debug_level      = 0        !! (*) Verbose level
- !!
- !! OPTIONAL
- !!
+ !!!!! OPTIONAL !!!!!!!!!!!!!!!
  interval_seconds = 3700     !! (p2) Frequency of large-scale fields update (s)
  input_from_file = T,        !! (n)(p2) Initialize a given domain with an input file
  /
-
 
  &domains
@@ -33,7 +30,5 @@
  e_vert = 61,                !! (r)(p2) Number of vertical levels
  p_top_requested = 5         !! (p3) Chosen value of pressure at the top of the model
- !!
- !! OPTIONAL
- !!
+ !!!!! OPTIONAL !!!!!!!!!!!!!!!
  time_step_fract_num = 0     !! Additional fraction to time_step: numerator 
  time_step_fract_den = 1     !! Additional fraction to time_step: denominator
@@ -53,7 +48,5 @@
 
  &physics
- !!
- !! OPTIONAL
- !!
+ !!!!! OPTIONAL !!!!!!!!!!!!!!!
  radt = 1,                   !! Ratio between physical and dynamical time step
  mars =  0,                  !! (r)(p2) Configuration of tracers: 
@@ -71,11 +64,9 @@
 
  &dynamics
- !!
- !! OPTIONAL
- !!
+ !!!!! OPTIONAL !!!!!!!!!!!!!!!
  time_step_sound = 6,        !! Ratio of time step dynamic/acoustic integration
                              !!   NB: an increase could help solve instabilities
  non_hydrostatic = T,        !! Integrate in non-hydrostatic/hydrostatic mode
- pd_scalar = F,              !! Positive-definite advection scheme for tracers 
+ pd_scalar = T,              !! Positive-definite advection scheme for tracers 
  !!
  diff_opt = 1                !! (*d) Diffusion option [set to 0 if LES or GCM]
@@ -93,7 +84,5 @@
 
  &bdy_control
- !!
- !! OPTIONAL
- !!
+ !!!!! OPTIONAL !!!!!!!!!!!!!!!
  specified = T,              !! (n)(p3) Boundary conditions specified by GCM 
  nested = F,                 !! (n)(p3) Boundary conditions from parent domain
@@ -109,4 +98,5 @@
  /
 
+ !!!!! DO NOT MODIFY !!!!!!!!!!
  &grib2
  /
Index: trunk/MESOSCALE/LMD_MM_MARS/SIMU/namelist.input_minim
===================================================================
--- trunk/MESOSCALE/LMD_MM_MARS/SIMU/namelist.input_minim	(revision 217)
+++ trunk/MESOSCALE/LMD_MM_MARS/SIMU/namelist.input_minim	(revision 223)
@@ -1,31 +1,30 @@
  &time_control
- start_year       = 2024,    !! (p1) Start Martian Year (20XX for MY XX)
- start_month      = 07,      !! (p1) Start Martian Month 
- start_day        = 01,      !! (p1) Start Martian Day 
- start_hour       = 06,      !! (p1) Start Martian Hour (at longitude 0)
- end_year         = 2024,    !! (p1) End Martian Year (20XX for MY XX)
- end_month        = 07,      !! (p1) End Martian Month
- end_day          = 02,      !! (p1) End Martian Day
- end_hour         = 06,      !! (p1) End Martian Hour (at longitude 0)
- history_interval    = 37,   !! Frequency of outputs (37 --> 3700s = 1 Martian hour)  
- frames_per_outfile  = 24,   !! Size of time dimension in files 
- restart          = .false.  !! (*) Output restart files ?
- restart_interval = 8880     !! (*) Frequency of output restart files ?
- io_form_history  = 2        !! (*) Choice of NETCDF for ouputs
- io_form_restart  = 2        !! (*) Choice of NETCDF for ouputs     
- io_form_input    = 2        !! (*) Choice of NETCDF for ouputs
- io_form_boundary = 2        !! (*) Choice of NETCDF for ouputs
- debug_level      = 0        !! (*) Verbose level
+ start_year       = 2024,    
+ start_month      = 07,      
+ start_day        = 01,    
+ start_hour       = 06,      
+ end_year         = 2024,    
+ end_month        = 07,     
+ end_day          = 02,     
+ end_hour         = 06,     
+ history_interval    = 37,   
+ frames_per_outfile  = 24,  
+ restart          = .false. 
+ restart_interval = 8880     
+ io_form_history  = 2      
+ io_form_restart  = 2          
+ io_form_input    = 2      
+ io_form_boundary = 2       
+ debug_level      = 0       
  /
 
-
  &domains
- time_step   = 50            !! Dynamical timestep
- dx = 20000,                 !! (p2) Horizontal resolution
- dy = 20000,                 !! (p2) Horizontal resolution (should be equal to dx)
- e_we   = 61,                !! (r)(p2) Number of longitude grid points
- e_sn   = 61,                !! (r)(p2) Number of latitude grid points
- e_vert = 61,                !! (r)(p2) Number of vertical levels
- p_top_requested = 5         !! (p3) Chosen value of pressure at the top of the model
+ time_step   = 50          
+ dx = 20000,               
+ dy = 20000,               
+ e_we   = 61,              
+ e_sn   = 61,             
+ e_vert = 61,             
+ p_top_requested = 5      
  /
 
@@ -45,6 +44,6 @@
  /
 
- &namelist_quilt              !! (*)
- nio_tasks_per_group = 0,     !! (*)
- nio_groups = 1,              !! (*)
- /                            !! (*)
+ &namelist_quilt              
+ nio_tasks_per_group = 0,     
+ nio_groups = 1,              
+ /                            
Index: trunk/MESOSCALE/LMD_MM_MARS/SRC/WPS/wps_mars/namelist.wps_TEST
===================================================================
--- trunk/MESOSCALE/LMD_MM_MARS/SRC/WPS/wps_mars/namelist.wps_TEST	(revision 217)
+++ trunk/MESOSCALE/LMD_MM_MARS/SRC/WPS/wps_mars/namelist.wps_TEST	(revision 223)
@@ -1,38 +1,35 @@
 &share				      	
- wrf_core = 'ARW',                    !!   [do not modify: choice of dynamical core]
- max_dom = 1,                         !! number of simulation domains 
- start_date = '0000-00-00_00:00:00'   !! YYYY-MM-DD_HH:mm:ss start date
- end_date   = '1111-11-11_11:11:11'   !! YYYY-MM-DD_HH:mm:ss end date
- interval_seconds = 3700              !! frequency of GCM updates [1 Mars hour = 3700 s]
- io_form_geogrid = 2,                 !!   [do not modify: choice of NETCDF outputs]	
- debug_level = 0,                     !! verbose level of the programs 
- opt_output_from_geogrid_path='./'    !! location of the geogrid outputs
+ wrf_core = 'ARW',                   !!   [do not modify: choice of dynamical core]
+ max_dom = 1,                        !! number of simulation domains 
+ start_date = '0000-00-00_00:00:00'  !! YYYY-MM-DD_HH:mm:ss start date
+ end_date   = '1111-11-11_11:11:11'  !! YYYY-MM-DD_HH:mm:ss end date
+ interval_seconds = 3700             !! frequency of GCM updates [1 Mars hour = 3700 s]
+ io_form_geogrid = 2,                !!   [do not modify: choice of NETCDF outputs]	
+ debug_level = 0,                    !! verbose level of the programs 
+ opt_output_from_geogrid_path='./'   !! location of the geogrid outputs
 /
 
-
 &geogrid
- parent_id         =   1,         !! number identifying the related parent domain
- parent_grid_ratio =   1,         !! ratio between parent and nested domains
- i_parent_start    =   1,         !! x-position of the southwest corner of nest
- j_parent_start    =   1,         !! y-position of the southwest corner of nest
- e_we              =  61,         !! number of longitude grid points
- e_sn              =  61,         !! number of latitude grid points
- geog_data_res     = 'gcm'        !! choice of static data sources
-                                  !! NB: possible: '64ppd', '32ppd', ...
-                                  !! NB: please glance at geogrid/GEOGRID.TBL
- dx = 20000,                      !! resolution (meters) in the x-dimension	
- dy = 20000,                      !! resolution (meters) in the y-dimension	
- map_proj = 'mercator',           !! map projection: 'mercator', 'lambert' or 'polar'
- ref_lat   =  -12.,               !! north latitude of the center of the domain 
- ref_lon   =  239.,               !! east longitude of the center of the domain
- truelat1  =  0.0,                !! (lambert or polar) lat position of projection cone
- truelat2  =  0.0,                !!   [do not modify]
- stand_lon =  0.0,                !! (lambert or polar) lon position of projection cone
- geog_data_path = './WPS_GEOG',   !!   [do not modify: symbolic link in the WPS folder]
+ parent_id         =   1,        !! number identifying the related parent domain
+ parent_grid_ratio =   1,        !! ratio between parent and nested domains
+ i_parent_start    =   1,        !! x-position of the southwest corner of nest
+ j_parent_start    =   1,        !! y-position of the southwest corner of nest
+ e_we              =  61,        !! number of longitude grid points
+ e_sn              =  61,        !! number of latitude grid points
+ geog_data_res     = 'gcm'       !! static data sources: '64ppd','32ppd',... cf.GEOGRID.TBL 
+ dx = 20000,                     !! resolution (meters) in the x-dimension	
+ dy = 20000,                     !! resolution (meters) in the y-dimension	
+ map_proj = 'mercator',          !! map projection: 'mercator', 'lambert' or 'polar'
+ ref_lat   =  -12.,              !! north latitude of the center of the domain 
+ ref_lon   =  239.,              !! east longitude of the center of the domain
+ truelat1  =  0.0,               !! (lambert or polar) lat position of projection cone
+ truelat2  =  0.0,               !!   [do not modify]
+ stand_lon =  0.0,               !! (lambert or polar) lon position of projection cone
+ geog_data_path = './WPS_GEOG',  !!   [do not modify: symbolic link in the WPS folder]
 /
 
 &metgrid
- fg_name = './WPSFEED/LMD'        !!   [do not modify: symbolic link in the WPS folder]
- io_form_metgrid = 2,             !!   [do not modify: choice of NETCDF outputs]
+ fg_name = './WPSFEED/LMD'       !!   [do not modify: symbolic link in the WPS folder]
+ io_form_metgrid = 2,            !!   [do not modify: choice of NETCDF outputs]
  opt_output_from_metgrid_path='./WRFFEED/current'  !!   [do not modify: symbolic link]
 /
