#! /bin/bash
####
#### A. Spiga -- 2011 -- 
####

#
## WRF modeling system software Version 3.0.1.1 (August 22, 2008)
#

wget http://www.mmm.ucar.edu/wrf/src/WRFV3.0.1.1.TAR.gz .
tar xzvf WRFV3.0.1.1.TAR.gz
\rm WRFV3.0.1.1.TAR.gz
#mv WRFV3/* .
#rmdir WRFV3

  #### faking stuff for copy_model script
  mv WRFV3 WRFV2
  touch in_reality_this_is_WRFV3_but_is_named_WRFV2_for_continuity
  cd WRFV2
  #ln -sf ../../WRFV2/mars_lmd .
  #ln -sf ../../WRFV2/mars_lmd_new .
  ln -sf ../modif .
    #ln -sf ../../WRFV2/*.h .
    #cp ../../WRFV2/call_meso_inifis?.inc .
    #cp ../../WRFV2/call_meso_physiq?.inc .
    touch dummy.h
    touch call_meso_inifis0.inc
    touch call_meso_physiq0.inc
  touch configure.defaults.dummy
  touch mars.sed.dummy
  mkdir external/RSL
  mkdir external/RSL/RSL
  touch external/RSL/RSL.dummy
  touch external/RSL/RSL/RSL.dummy

#
## Replacing modif files
#

#tar xzvf LMD_LES_MARS_patches.tar.gz 
#mv LMD_LES_MARS_patches LMD_LES_MARS/modif
#cd LMD_LES_MARS
#ln -sf ../LMD_LES_MARS_patches modif

#cd modif
#ln -sf ../../LMD_MM_MARS/SRC/WRFV2/phys/module_lmd_driver.F
#cd ..

cd dyn_em
ln -sf ../modif/module_big_step_utilities_em.F .
ln -sf ../modif/module_first_rk_step_part1.F . 
ln -sf ../modif/module_first_rk_step_part2.F .
ln -sf ../modif/module_initialize_les.F .
ln -sf ../modif/solve_em.F .
ln -sf ../modif/module_em.F .
ln -sf ../modif/module_diffusion_em.F .
ln -sf ../modif/Makefile_dyn_em Makefile
cd ..

cd frame
ln -sf ../modif/module_driver_constants.F .
cd ..

cd Registry
ln -sf ../modif/Registry.EM .
#ln -sf ../modif/Registry.bash .
cd ..

cd phys
ln -sf ../modif/Makefile .
ln -sf ../modif/module_lmd_driver.F .
ln -sf ../modif/module_physics_addtendc.F .
ln -sf ../modif/module_physics_init.F .
cd ..

cd share
ln -sf ../modif/module_model_constants.F .
cd ..


#ln -sf modif/makeles .


#### create a fake directory
#mkdir -p mars_lmd/libf/phymars

