1 | ####################### |
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2 | ##### PLANETOPLOT ##### |
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3 | ####################### |
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4 | |
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5 | ### A. Spiga -- LMD -- 06~09/2011 -- General building and mapping capabilities |
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6 | ### T. Navarro -- LMD -- 10~11/2011 -- Improved use for GCM and added sections + 1Dplot capabilities |
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7 | ### A. Colaitis -- LMD -- 11/2011 -- Mostly minor improvements and inter-plot operation capabilities + zrecast interpolation for gcm |
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8 | ### A. Spiga -- LMD -- 11~12/2011 -- Extended multivar subplot capabilities + cosmetic changes + general cleaning and tests |
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9 | ### A. Colaitis -- LMD -- 12/2011 -- Added movie capability [mencoder must be installed] |
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10 | ### A. Spiga -- LMD -- 12/2011 -- Added HTML animated page capability + general tests of consistency [winds, etc...] + consistent generic movie loop |
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11 | ### J. Leconte -- LMD -- 02/2012 -- Added area weighted averaging. Compatibility with terrestrial gcm. |
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12 | ### A. Spiga -- LMD -- 03/2012 -- Cleaning and improved comments |
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13 | def planetoplot (namefiles,\ |
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14 | level=0,\ |
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15 | vertmode=0,\ |
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16 | proj=None,\ |
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17 | back=None,\ |
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18 | target=None, |
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19 | stride=3,\ |
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20 | var=None,\ |
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21 | colorb="def",\ |
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22 | winds=False,\ |
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23 | addchar=None,\ |
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24 | interv=[0,1],\ |
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25 | vmin=None,\ |
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26 | vmax=None,\ |
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27 | tile=False,\ |
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28 | zoom=None,\ |
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29 | display=True,\ |
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30 | hole=False,\ |
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31 | save="gui",\ |
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32 | anomaly=False,\ |
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33 | var2=None,\ |
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34 | ndiv=10,\ |
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35 | mult=1.,\ |
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36 | zetitle=["fill"],\ |
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37 | slon=None,\ |
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38 | slat=None,\ |
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39 | svert=None,\ |
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40 | stime=None,\ |
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41 | outputname=None,\ |
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42 | resolution=200,\ |
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43 | ope=None,\ |
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44 | fileref=None,\ |
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45 | minop=0.,\ |
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46 | maxop=0.,\ |
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47 | titleref="fill",\ |
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48 | invert_y=False,\ |
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49 | xaxis=[None,None],\ |
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50 | yaxis=[None,None],\ |
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51 | ylog=False,\ |
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52 | yintegral=False,\ |
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53 | blat=None,\ |
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54 | blon=None,\ |
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55 | tsat=False,\ |
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56 | flagnolow=False,\ |
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57 | mrate=None,\ |
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58 | mquality=False,\ |
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59 | trans=1,\ |
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60 | zarea=None,\ |
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61 | axtime=None,\ |
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62 | redope=None,\ |
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63 | seevar=False,\ |
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64 | xlab=None,\ |
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65 | ylab=None,\ |
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66 | lbls=None,\ |
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67 | lstyle=None,\ |
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68 | cross=None): |
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69 | |
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70 | #################################################################################################################### |
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71 | ### Colorbars http://www.scipy.org/Cookbook/Matplotlib/Show_colormaps?action=AttachFile&do=get&target=colormaps3.png |
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72 | |
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73 | ################################# |
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74 | ### Load librairies and functions |
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75 | from netCDF4 import Dataset |
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76 | from myplot import getcoord2d,define_proj,makeplotres,simplinterv,vectorfield,ptitle,latinterv,getproj,wrfinterv,dumpbdy,\ |
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77 | fmtvar,definecolorvec,defcolorb,getprefix,putpoints,calculate_bounds,errormess,definesubplot,\ |
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78 | zoomset,getcoorddef,getwinddef,whatkindfile,reducefield,bounds,getstralt,getfield,smooth,nolow,\ |
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79 | getname,localtime,check_localtime,polarinterv,getsindex,define_axis,determineplot,readslices,bidimfind,getlschar,hole_bounds,\ |
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80 | windamplitude,slopeamplitude,deltat0t1 |
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81 | from mymath import deg,max,min,mean,get_tsat,writeascii,fig2data,fig2img |
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82 | import matplotlib as mpl |
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83 | from matplotlib.pyplot import contour,contourf, subplot, figure, rcParams, savefig, colorbar, pcolor, show, plot, clabel, title, close, legend, xlabel, axis, ylabel, subplots_adjust, axes |
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84 | from matplotlib.cm import get_cmap |
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85 | #from mpl_toolkits.basemap import cm |
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86 | import numpy as np |
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87 | from numpy.core.defchararray import find |
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88 | from videosink import VideoSink |
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89 | import subprocess |
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90 | #from singlet import singlet |
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91 | from itertools import cycle |
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92 | |
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93 | ######################### |
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94 | ### PRELIMINARY STUFF ### |
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95 | ######################### |
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96 | ### we say hello |
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97 | print "********************************************" |
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98 | print "********** WELCOME TO PLANETOPLOT **********" |
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99 | print "********************************************" |
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100 | ### we ensure namefiles and var are arrays |
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101 | if not isinstance(namefiles, np.ndarray): namefiles = [namefiles] |
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102 | if not isinstance(var, np.ndarray): var = [var] |
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103 | ### we initialize a few variables |
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104 | initime=-1 ; sslon = None ; sslat = None |
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105 | if slon is not None: sslon = np.zeros([1,2]) |
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106 | if slat is not None: sslat = np.zeros([1,2]) |
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107 | k = 0 ; firstfile = True ; count = 0 |
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108 | ### we avoid specific cases not yet implemented |
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109 | if mrate is not None and len(var) > 1: errormess("multivar not allowed in movies. should be fixed soon!") |
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110 | ### we prepare number of plot fields [zelen] and plot instances [numplot] according to user choices |
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111 | ### --> we support multifile and multivar plots : files + vars separated by commas are on the same figure |
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112 | nlon, nlat, nvert, ntime, mapmode, nslices = determineplot(slon, slat, svert, stime) |
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113 | zelen = len(namefiles)*len(var) |
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114 | numplot = zelen*nslices |
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115 | print "********** FILES, SLICES, VARS, TOTAL PLOTS: ", len(namefiles), nslices, len(var), numplot |
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116 | print "********** MAPMODE: ", mapmode |
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117 | ### we correct number of plot fields for possible operation (substract, etc...) |
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118 | if ope is not None: |
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119 | if fileref is not None: zelen = zelen + 2 |
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120 | elif "var" in ope: zelen = zelen + 1 |
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121 | ### we define the arrays for plot fields -- which will be placed within multiplot loops |
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122 | all_var = [[]]*zelen ; all_var2 = [[]]*zelen |
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123 | all_title = [[]]*zelen ; all_varname = [[]]*zelen ; all_namefile = [[]]*zelen ; all_time = [[]]*zelen |
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124 | all_windu = [[]]*zelen ; all_windv = [[]]*zelen |
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125 | |
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126 | ############################# |
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127 | ### LOOP OVER PLOT FIELDS ### |
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128 | ############################# |
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129 | for nnn in range(len(namefiles)): |
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130 | for vvv in range(len(var)): |
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131 | |
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132 | ### we load each NETCDF objects in namefiles |
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133 | namefile = namefiles[nnn] |
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134 | nc = Dataset(namefile) |
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135 | ### we explore the variables in the file |
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136 | varinfile = nc.variables.keys() |
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137 | if seevar: print varinfile ; exit() |
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138 | ### we define the type of file we have (gcm, meso, etc...) |
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139 | typefile = whatkindfile(nc) |
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140 | if firstfile: typefile0 = typefile |
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141 | elif typefile != typefile0: errormess("Not the same kind of files !", [typefile0, typefile]) |
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142 | ### we care for input file being 1D simulations |
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143 | if typefile in ['gcm'] and len(nc.variables["longitude"][:]) is 1 and len(nc.variables["latitude"][:]) is 1: mapmode=0 ; winds=False |
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144 | elif typefile in ['earthgcm'] and len(nc.variables["lon"][:]) is 1 and len(nc.variables["lat"][:]) is 1: mapmode=0 ; winds=False |
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145 | ### we create default vert and time prescriptions if not here in case mapping mode is on (lat/lon maps) |
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146 | if redope is None and mapmode == 1: |
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147 | if svert is None: svert = readslices(str(level)) ; nvert=1 |
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148 | if stime is None and mrate is None: |
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149 | stime = readslices(str(0)) ; ntime=1 ## this is a default choice |
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150 | print "WELL... nothing about time axis. I took default: first time reference stored in file." |
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151 | ### we get the names of variables to be read. in case only one available, we choose this one. |
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152 | varname=var[vvv] |
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153 | if ((varname not in nc.variables) and not ((typefile in ['meso']) and (varname in ['UV','uv','uvmet','slopexy','SLOPEXY','deltat','DELTAT']))): |
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154 | if len(varinfile) == 1: varname = varinfile[0] |
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155 | else: varname = False |
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156 | ### we get the names of wind variables to be read (if any) |
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157 | if winds: |
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158 | [uchar,vchar,metwind] = getwinddef(nc) |
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159 | if uchar == 'not found': winds = False |
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160 | ### we tell the user that either no var or no wind is not acceptable |
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161 | if not varname and not winds: errormess("please set at least winds or var",printvar=nc.variables) |
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162 | ### we get the coordinates lat/lon to be used |
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163 | [lon2d,lat2d] = getcoorddef(nc) |
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164 | ### we get an adapted map projection if none is provided by the user |
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165 | if proj == None: proj = getproj(nc) |
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166 | ### we define plot boundaries given projection or user choices |
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167 | if firstfile: |
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168 | if proj in ["npstere","spstere"]: [wlon,wlat] = polarinterv(lon2d,lat2d) |
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169 | elif proj in ["lcc","laea"]: [wlon,wlat] = wrfinterv(lon2d,lat2d) |
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170 | else: [wlon,wlat] = simplinterv(lon2d,lat2d) |
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171 | if zoom: [wlon,wlat] = zoomset(wlon,wlat,zoom) |
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172 | elif zarea is not None: [wlon,wlat] = latinterv(area=zarea) |
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173 | |
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174 | ########################################################## |
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175 | ############ LOAD 4D DIMENSIONS : x, y, z, t ############# |
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176 | ########################################################## |
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177 | if typefile in ["gcm","earthgcm","ecmwf"]: |
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178 | if slon is not None: sslon = slon |
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179 | if slat is not None: sslat = slat |
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180 | ### LAT |
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181 | if "latitude" in nc.variables: lat = nc.variables["latitude"][:] |
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182 | elif "lat" in nc.variables: lat = nc.variables["lat"][:] |
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183 | ### LON |
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184 | if "longitude" in nc.variables: lon = nc.variables["longitude"][:] |
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185 | elif "lon" in nc.variables: lon = nc.variables["lon"][:] |
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186 | ### ALT |
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187 | if "altitude" in nc.variables: vert = nc.variables["altitude"][:] |
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188 | elif "Alt" in nc.variables: vert = nc.variables["Alt"][:] |
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189 | elif "lev" in nc.variables: vert = nc.variables["lev"][:] |
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190 | else: vert = [0.] |
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191 | ### AIRE (to weight means with the area) |
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192 | if "aire" in nc.variables: area = nc.variables["aire"][:,:] |
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193 | else: area = None |
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194 | ### TIME |
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195 | if "Time" in nc.variables: time = nc.variables["Time"][:] |
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196 | elif "time" in nc.variables: time = nc.variables["time"][:] |
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197 | elif "time_counter" in nc.variables: time = nc.variables["time_counter"][:]/86400. #### time counter cinverstion from s-> days |
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198 | else: errormess("no time axis found.") |
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199 | if axtime in ["ls","sol"]: errormess("not supported. should not be too difficult though.") |
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200 | # for 1D plots (no need for longitude computation): |
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201 | if axtime in ["lt"]: |
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202 | if initime == -1: initime=input("Please type initial local time:") |
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203 | time = (initime+time*24)%24 |
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204 | print "LOCAL TIMES.... ", time |
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205 | elif typefile in ['meso','geo']: |
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206 | area = None ## not active for the moment |
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207 | ###### STUFF TO GET THE CORRECT LAT/LON FROM MESOSCALE FILES WITH 2D LAT/LON ARRAYS |
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208 | ###### principle: calculate correct indices then repopulate slon and slat |
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209 | if slon is not None or slat is not None: |
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210 | if firstfile and save == 'png' and typefile == 'meso' and "HGT" in varinfile and display: iwantawhereplot = nc #show a topo map with a cross on the chosen point |
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211 | else: iwantawhereplot = None #do not show anything, just select indices |
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212 | numlon = 1 ; numlat = 1 |
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213 | if slon is not None: numlon = slon.shape[1] |
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214 | if slat is not None: numlat = slat.shape[1] |
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215 | indices = np.ones([numlon,numlat,2]) ; vlon = None ; vlat = None |
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216 | for iii in range(numlon): |
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217 | for jjj in range(numlat): |
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218 | if slon is not None: vlon = slon[0][iii] ### note: slon[:][0] does not work |
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219 | if slat is not None: vlat = slat[0][jjj] ### note: slon[:][0] does not work |
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220 | indices[iii,jjj,:] = bidimfind(lon2d,lat2d,vlon,vlat,file=iwantawhereplot) |
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221 | lonp,latp = ( lon2d[indices[iii,jjj,0],indices[iii,jjj,1]] , lat2d[indices[iii,jjj,0],indices[iii,jjj,1]] ) |
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222 | ### possible bug here if several --lat |
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223 | for iii in range(numlon): |
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224 | for jjj in range(numlat): |
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225 | if slon is not None: sslon[0][iii] = indices[iii,0,1] #...this is idx |
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226 | if slat is not None: sslat[0][jjj] = indices[0,jjj,0] #...this is idy |
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227 | lonp,latp = ( lon2d[indices[0,0,0],indices[0,0,1]] , lat2d[indices[0,0,0],indices[0,0,1]] ) |
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228 | ###### |
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229 | if typefile in ['meso'] and mapmode == 1: lon2d = dumpbdy(lon2d,6) ; lat2d = dumpbdy(lat2d,6) ### important to do that now and not before |
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230 | ###### |
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231 | if varname in ['PHTOT','W']: vertdim='BOTTOM-TOP_PATCH_END_STAG' |
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232 | else: vertdim='BOTTOM-TOP_PATCH_END_UNSTAG' |
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233 | if (var2 is not None and var2 not in ['PHTOT','W']): dumped_vert_stag=True ; vertdim='BOTTOM-TOP_PATCH_END_UNSTAG' |
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234 | else: dumped_vert_stag=False |
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235 | if varname in ['V']: latdim='SOUTH-NORTH_PATCH_END_STAG' |
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236 | else: latdim='SOUTH-NORTH_PATCH_END_UNSTAG' |
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237 | if varname in ['U']: londim='WEST-EAST_PATCH_END_STAG' |
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238 | else: londim='WEST-EAST_PATCH_END_UNSTAG' |
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239 | lon = np.arange(0,getattr(nc,londim),1) ; lat = np.arange(0,getattr(nc,latdim),1) |
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240 | ### |
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241 | if axtime in ["ls","sol"]: |
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242 | lstab, soltab, lttab = getlschar ( namefile, getaxis = True ) |
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243 | if axtime == "ls": time = lstab |
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244 | elif axtime == "sol": time = soltab |
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245 | else: |
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246 | if "Times" in nc.variables: time = count + np.arange(0,len(nc.variables["Times"]),1) |
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247 | elif "Time" in nc.variables: time = count + np.arange(0,len(nc.variables["Time"]),1) |
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248 | else: time = count + np.arange(0,1,1) |
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249 | if ope in ["cat"]: |
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250 | if nnn > 0: count = time[-1] + 1 ## so that a cat is possible with simple subscripts |
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251 | else: count = 0 |
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252 | else: count = 0 |
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253 | if axtime in ["lt"]: |
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254 | ftime = np.zeros(len(time)) |
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255 | for i in range(len(time)): |
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256 | ftime[i] = localtime ( interv[0]+time[i]*interv[1], 0.5*(wlon[0]+wlon[1]) ) |
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257 | time=ftime |
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258 | time=check_localtime(time) |
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259 | print "LOCAL TIMES.... ", time |
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260 | |
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261 | ### |
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262 | if typefile in ['geo']: vert = [0.] ; stime = readslices(str(0)) |
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263 | else: |
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264 | if vertmode is None: vertmode=0 |
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265 | if vertmode == 0: vert = np.arange(0,getattr(nc,vertdim),1) |
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266 | elif vertmode == -1: vert = nc.variables["PHTOT"][0,:,0,0]/3.72 ; vert = np.array(vert[0:len(vert)-1]) #; print vert |
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267 | elif vertmode == 1 or vertmode == 2: vert = nc.variables["vert"][:] ## pressure in Pa |
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268 | else: vert = nc.variables["vert"][:]/1000. ## altitude in km |
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269 | #if firstfile: |
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270 | # lat0 = lat |
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271 | #elif len(lat0) != len(lat): |
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272 | # errormess("Not the same latitude lengths !", [len(lat0), len(lat)]) |
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273 | #elif sum((lat == lat0) == False) != 0: |
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274 | # errormess("Not the same latitudes !", [lat,lat0]) |
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275 | ## Faire d'autre checks sur les compatibilites entre fichiers!! |
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276 | ########################################################## |
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277 | ########################################################## |
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278 | ########################################################## |
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279 | |
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280 | all_varname[k] = varname |
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281 | all_namefile[k] = namefile |
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282 | all_time[k] = time |
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283 | if var2: |
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284 | if ((var2 in ['slopexy','SLOPEXY']) and (typefile in ['meso']) and (var2 not in nc.variables)): all_var2[k] = slopeamplitude(nc) |
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285 | else: all_var2[k] = getfield(nc,var2) |
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286 | if winds: all_windu[k] = getfield(nc,uchar) ; all_windv[k] = getfield(nc,vchar) |
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287 | ##################### |
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288 | ##### GETFIELDS ##### |
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289 | ##################### |
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290 | ##### SPECIFIC CASES |
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291 | ##### 1. saturation temperature |
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292 | if varname in ["temp","t","T_nadir_nit","T_nadir_day","temp_day","temp_night"] and tsat: |
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293 | tt=getfield(nc,varname) ; print "computing Tsat-T, I ASSUME Z-AXIS IS PRESSURE" |
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294 | if type(tt).__name__=='MaskedArray': tt.set_fill_value([np.NaN]) ; tinput=tt.filled() |
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295 | else: tinput=tt |
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296 | all_var[k]=get_tsat(vert,tinput,zlon=lon,zlat=lat,zalt=vert,ztime=time) |
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297 | ##### 2. wind amplitude |
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298 | elif ((varname in ['UV','uv','uvmet']) and (typefile in ['meso']) and (varname not in nc.variables)): |
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299 | all_var[k]=windamplitude(nc) |
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300 | elif ((varname in ['slopexy','SLOPEXY']) and (typefile in ['meso']) and (varname not in nc.variables)): |
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301 | all_var[k]=slopeamplitude(nc) |
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302 | elif ((varname in ['DELTAT','deltat']) and (typefile in ['meso']) and (varname not in nc.variables)): |
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303 | all_var[k]=deltat0t1(nc) |
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304 | else: |
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305 | ##### GENERAL STUFF HERE |
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306 | all_var[k] = getfield(nc,varname) |
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307 | print "**** GOT SUBDATA:",k," NAMEFILE:",namefile," VAR:",varname, var2 ; k += 1 ; firstfile = False |
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308 | #### End of for namefile in namefiles |
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309 | |
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310 | ################################## |
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311 | ### Operation on files |
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312 | if ope is not None: |
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313 | print "********** OPERATION: ",ope |
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314 | if "var" not in ope: |
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315 | if len(var) > 1: errormess("for this operation... please set only one var !") |
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316 | if ope in ["-","+","-%"]: |
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317 | if fileref is not None: |
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318 | ncref = Dataset(fileref) |
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319 | if ((all_varname[k-1] in ['UV','uv','uvmet']) and (typefile in ['meso']) and (all_varname[k-1] not in ncref.variables)): |
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320 | all_var[k] = windamplitude(ncref) |
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321 | elif ((all_varname[k-1] in ['slopexy','SLOPEXY']) and (typefile in ['meso']) and (all_varname[k-1] not in ncref.variables)): |
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322 | all_var[k] = slopeamplitude(ncref) |
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323 | elif ((all_varname[k-1] in ['DELTAT','deltat']) and (typefile in ['meso']) and (all_varname[k-1] not in ncref.variables)): |
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324 | all_var[k]=deltat0t1(ncref) |
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325 | else: |
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326 | all_var[k] = getfield(ncref,all_varname[k-1]) |
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327 | all_varname[k] = all_varname[k-1] ; all_time[k] = all_time[k-1] ; all_namefile[k] = all_namefile[k-1] ; all_var2[k] = all_var2[k-1] |
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328 | if winds: all_windu[k] = getfield(ncref,uchar) ; all_windv[k] = getfield(ncref,vchar) |
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329 | else: errormess("fileref is missing!") |
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330 | if ope == "-": all_var[k+1]= all_var[k-1] - all_var[k] |
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331 | elif ope == "+": all_var[k+1]= all_var[k-1] + all_var[k] |
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332 | elif ope == "-%": |
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333 | masked = np.ma.masked_where(all_var[k] == 0,all_var[k]) |
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334 | masked.set_fill_value([np.NaN]) |
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335 | all_var[k+1]= 100.*(all_var[k-1] - masked)/masked |
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336 | all_varname[k+1] = all_varname[k] ; all_time[k+1] = all_time[k] ; all_namefile[k+1] = all_namefile[k] ; all_var2[k+1] = all_var2[k] ; numplot = numplot+2 |
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337 | if winds: all_windu[k+1] = all_windu[k-1]-all_windu[k] ; all_windv[k+1] = all_windv[k-1] - all_windv[k] |
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338 | elif ope in ["cat"]: |
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339 | tabtime = all_time[0];tab = all_var[0];k = 1 |
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340 | if var2: tab2 = all_var2[0] |
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341 | while k != len(namefiles) and len(all_time[k]) != 0: |
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342 | if var2: tab2 = np.append(tab2,all_var2[k],axis=0) |
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343 | tabtime = np.append(tabtime,all_time[k]) ; tab = np.append(tab,all_var[k],axis=0) ; k += 1 |
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344 | all_time[0] = np.array(tabtime) ; all_var[0] = np.array(tab) ; numplot = 1 |
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345 | if var2: all_var2[0] = np.array(tab2) |
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346 | else: errormess(ope+" : non-implemented operation. Check pp.py --help") |
---|
347 | else: |
---|
348 | if len(namefiles) > 1: errormess("for this operation... please set only one file !") |
---|
349 | if len(var) > 2: errormess("not sure this works for more than 2 vars... please check.") |
---|
350 | if ope in ["div_var"]: all_var[k] = all_var[k-2] / all_var[k-1] ; insert = '_div_' |
---|
351 | elif ope in ["mul_var"]: all_var[k] = all_var[k-2] * all_var[k-1] ; insert = '_mul_' |
---|
352 | elif ope in ["add_var"]: all_var[k] = all_var[k-2] + all_var[k-1] ; insert = '_add_' |
---|
353 | elif ope in ["sub_var"]: all_var[k] = all_var[k-2] - all_var[k-1] ; insert = '_sub_' |
---|
354 | else: errormess(ope+" : non-implemented operation. Check pp.py --help") |
---|
355 | numplot = numplot + 1 ; all_time[k] = all_time[k-1] ; all_namefile[k] = all_namefile[k-1] |
---|
356 | all_varname[k] = all_varname[k-2] + insert + all_varname[k-1] |
---|
357 | ################################## |
---|
358 | ### Open a figure and set subplots |
---|
359 | fig = figure() |
---|
360 | subv,subh = definesubplot( numplot, fig ) |
---|
361 | if ope in ['-','-%']: subv,subh = 2,2 |
---|
362 | |
---|
363 | ################################# |
---|
364 | ### Time loop for plotting device |
---|
365 | nplot = 1 ; error = False |
---|
366 | if lstyle is not None: linecycler = cycle(lstyle) |
---|
367 | else: linecycler = cycle(["-","--","-.",":"]) |
---|
368 | print "********************************************" |
---|
369 | while error is False: |
---|
370 | |
---|
371 | print "********** NPLOT", nplot |
---|
372 | if nplot > numplot: break |
---|
373 | |
---|
374 | #################################################################### |
---|
375 | ## get all indexes to be taken into account for this subplot and then reduce field |
---|
376 | ## We plot 1) all lon slices 2) all lat slices 3) all vert slices 4) all time slices and then go to the next slice |
---|
377 | indexlon = getsindex(sslon,(nplot-1)%nlon,lon) |
---|
378 | indexlat = getsindex(sslat,((nplot-1)//nlon)%nlat,lat) |
---|
379 | indexvert = getsindex(svert,((nplot-1)//(nlon*nlat))%nvert,vert) |
---|
380 | if ope is not None: |
---|
381 | if fileref is not None: index_f = ((nplot-1)//(nlon*nlat*nvert*ntime))%(len(namefiles)+2) ## OK only 1 var, see test in the beginning |
---|
382 | elif "var" in ope: index_f = ((nplot-1)//(nlon*nlat*nvert*ntime))%(len(var)+1) ## OK only 1 file, see test in the beginning |
---|
383 | elif "cat" in ope: index_f = 0 |
---|
384 | else: yeah = len(namefiles)*len(var) ; index_f = ((nplot-1)//(nlon*nlat*nvert*ntime))%yeah |
---|
385 | time = all_time[index_f] |
---|
386 | if mrate is not None: indextime = None |
---|
387 | else: indextime = getsindex(stime,((nplot-1)//(nlon*nlat*nvert))%ntime,time) |
---|
388 | ltst = None |
---|
389 | if typefile in ['meso'] and indextime is not None: ltst = localtime ( interv[0]+indextime*interv[1], 0.5*(wlon[0]+wlon[1]) ) |
---|
390 | print "********** INDEX LON:",indexlon," LAT:",indexlat," VERT:",indexvert," TIME:",indextime |
---|
391 | ##var = nc.variables["phisinit"][:,:] |
---|
392 | ##contourf(np.transpose(var),30,cmap = get_cmap(name="Greys_r") ) ; axis('off') ; plot(indexlat,indexlon,'mx',mew=4.0,ms=20.0) |
---|
393 | ##show() |
---|
394 | ##exit() |
---|
395 | #truc = True |
---|
396 | #truc = False |
---|
397 | #if truc: indexvert = None |
---|
398 | #################################################################### |
---|
399 | ########## REDUCE FIELDS |
---|
400 | #################################################################### |
---|
401 | error = False |
---|
402 | varname = all_varname[index_f] |
---|
403 | if varname: ### what is shaded. |
---|
404 | what_I_plot, error = reducefield( all_var[index_f], d4=indextime, d1=indexlon, d2=indexlat, d3=indexvert, \ |
---|
405 | yint=yintegral, alt=vert, anomaly=anomaly, redope=redope, mesharea=area ) |
---|
406 | if mult != 2718.: what_I_plot = what_I_plot*mult |
---|
407 | else: what_I_plot = np.log10(what_I_plot) ; print "log plot" |
---|
408 | if var2: ### what is contoured. |
---|
409 | what_I_plot_contour, error = reducefield( all_var2[index_f], d4=indextime, d1=indexlon, d2=indexlat , d3=indexvert, \ |
---|
410 | yint=yintegral, alt=vert ) |
---|
411 | if winds: ### what is plot as vectors. |
---|
412 | vecx, error = reducefield( all_windu[index_f], d4=indextime, d3=indexvert, yint=yintegral, alt=vert) |
---|
413 | vecy, error = reducefield( all_windv[index_f], d4=indextime, d3=indexvert, yint=yintegral, alt=vert) |
---|
414 | if varname in [uchar,vchar]: what_I_plot = np.sqrt( np.square(vecx) + np.square(vecy) ) ; varname = "wind" |
---|
415 | |
---|
416 | ##################################################################### |
---|
417 | #if truc: |
---|
418 | # nx = what_I_plot.shape[2] ; ny = what_I_plot.shape[1] ; nz = what_I_plot.shape[0] |
---|
419 | # for k in range(nz): print k,' over ',nz ; what_I_plot[k,:,:] = what_I_plot[k,:,:] / smooth(what_I_plot[k,:,:],12) |
---|
420 | # for iii in range(nx): |
---|
421 | # for jjj in range(ny): |
---|
422 | # deviation = what_I_plot[:,jjj,iii] ; mx = max(deviation) ; mn = min(deviation) |
---|
423 | # if iii > 6 and iii < nx-6 and jjj > 6 and jjj < ny-6: what_I_plot[0,jjj,iii],rel = singlet(deviation,vert/1000.) ### z must be in km |
---|
424 | # else: what_I_plot[0,jjj,iii] = 0. |
---|
425 | # if np.abs(what_I_plot[0,jjj,iii]) > 1.5: |
---|
426 | # print iii,jjj,what_I_plot[0,jjj,iii],int(abs(1.-mx)*100.),int(abs(1.-mn)*100.) |
---|
427 | # plot(rel) |
---|
428 | # show() |
---|
429 | # anomaly = True ### pour avoir les bons reglages plots |
---|
430 | # what_I_plot = what_I_plot[0,:,:] |
---|
431 | ##################################################################### |
---|
432 | |
---|
433 | #################################################################### |
---|
434 | ### General plot settings |
---|
435 | changesubplot = (numplot > 1) and (len(what_I_plot.shape) != 1) ## default for 1D plots: superimposed. to be reworked for better flexibility. |
---|
436 | if changesubplot: subplot(subv,subh,nplot) #; subplots_adjust(wspace=0,hspace=0) |
---|
437 | #################################################################### |
---|
438 | if error: |
---|
439 | errormess("There is an error in reducing field !") |
---|
440 | else: |
---|
441 | ticks = ndiv + 1 |
---|
442 | fvar = varname |
---|
443 | if anomaly: fvar = 'anomaly' |
---|
444 | ### |
---|
445 | if mapmode == 0: ### could this be moved inside imov loop ? |
---|
446 | itime=indextime |
---|
447 | if len(what_I_plot.shape) == 3: itime=[0] |
---|
448 | m = None ; x = None ; y = None |
---|
449 | latyeah = lat ; lonyeah = lon |
---|
450 | if typefile in ['meso']: |
---|
451 | # now that the section is determined we can set the real lat |
---|
452 | # ... or for now, a temptative one. |
---|
453 | if slon is not None: latyeah = lat2d[:,0] |
---|
454 | if slat is not None: lonyeah = lon2d[0,:] |
---|
455 | what_I_plot, x, y = define_axis(lonyeah,latyeah,vert,time,indexlon,indexlat,indexvert,\ |
---|
456 | itime,what_I_plot, len(all_var[index_f].shape),vertmode) |
---|
457 | ### |
---|
458 | if (fileref is not None) and (index_f == numplot-1): zevmin, zevmax = calculate_bounds(what_I_plot,vmin=minop,vmax=maxop) |
---|
459 | else: zevmin, zevmax = calculate_bounds(what_I_plot,vmin=vmin,vmax=vmax) |
---|
460 | if (fileref is not None) and (index_f == numplot-1): colorb = "RdBu_r" |
---|
461 | if colorb in ["def","nobar","onebar"]: palette = get_cmap(name=defcolorb(fvar.upper())) |
---|
462 | else: palette = get_cmap(name=colorb) |
---|
463 | #palette = cm.GMT_split |
---|
464 | ##### 1. ELIMINATE 0D or >3D CASES |
---|
465 | if len(what_I_plot.shape) == 0: |
---|
466 | print "VALUE VALUE VALUE VALUE ::: ",what_I_plot |
---|
467 | save = 'donothing' |
---|
468 | elif len(what_I_plot.shape) >= 4: |
---|
469 | print "WARNING!!! ",len(what_I_plot.shape),"-D PLOT NOT SUPPORTED !!! dimensions: ",what_I_plot.shape |
---|
470 | errormess("Are you sure you did not forget to prescribe a dimension ?") |
---|
471 | ##### 2. HANDLE simple 1D/2D field and movies of 1D/2D fields |
---|
472 | else: |
---|
473 | if mrate is not None: iend=len(time)-1 |
---|
474 | else: iend=0 |
---|
475 | imov = 0 |
---|
476 | if len(what_I_plot.shape) == 3: |
---|
477 | if var2: which = "contour" ## have to start with contours rather than shading |
---|
478 | else: which = "regular" |
---|
479 | if mrate is None: errormess("3D field. Use --rate RATE for movie or specify --time TIME. Exit.") |
---|
480 | elif len(what_I_plot.shape) == 2: |
---|
481 | if var2: which = "contour" ## have to start with contours rather than shading |
---|
482 | else: which = "regular" |
---|
483 | if mrate is not None: which = "unidim" |
---|
484 | elif len(what_I_plot.shape) == 1: |
---|
485 | which = "unidim" |
---|
486 | if what_I_plot.shape[-1] == 1: print "VALUE VALUE VALUE VALUE ::: ", what_I_plot[0] ; save = 'donothing' |
---|
487 | ##### IMOV LOOP #### IMOV LOOP |
---|
488 | while imov <= iend: |
---|
489 | print "-> frame ",imov+1, which |
---|
490 | if which == "regular": |
---|
491 | if mrate is None: what_I_plot_frame = what_I_plot |
---|
492 | else: what_I_plot_frame = what_I_plot[imov,:,:] |
---|
493 | if winds: |
---|
494 | if mrate is None: vecx_frame = vecx ; vecy_frame = vecy |
---|
495 | else: vecx_frame = vecx[imov,:,:] ; vecy_frame = vecy[imov,:,:] |
---|
496 | elif which == "contour": |
---|
497 | if mrate is None or what_I_plot_contour.ndim < 3: what_I_plot_frame = what_I_plot_contour |
---|
498 | else: what_I_plot_frame = what_I_plot_contour[imov,:,:] |
---|
499 | elif which == "unidim": |
---|
500 | if mrate is None: what_I_plot_frame = what_I_plot |
---|
501 | else: what_I_plot_frame = what_I_plot[:,imov] ## because swapaxes |
---|
502 | #if mrate is not None: |
---|
503 | if mapmode == 1: |
---|
504 | m = define_proj(proj,wlon,wlat,back=back,blat=blat,blon=blon) ## this is dirty, defined above but out of imov loop |
---|
505 | x, y = m(lon2d, lat2d) ## this is dirty, defined above but out of imov loop |
---|
506 | if typefile in ['meso'] and mapmode == 1: what_I_plot_frame = dumpbdy(what_I_plot_frame,6,condition=True) |
---|
507 | # if typefile in ['mesoideal']: what_I_plot_frame = dumpbdy(what_I_plot_frame,0,stag='W',condition=dumped_vert_stag) |
---|
508 | |
---|
509 | if which == "unidim": |
---|
510 | if lbls is not None: lbl=lbls[index_f] |
---|
511 | else: |
---|
512 | lbl = "" |
---|
513 | if indexlat is not None: lbl = lbl + " ix" + str(indexlat[0]) |
---|
514 | if indexlon is not None: lbl = lbl + " iy" + str(indexlon[0]) |
---|
515 | if indexvert is not None: lbl = lbl + " iz" + str(indexvert[0]) |
---|
516 | if indextime is not None: lbl = lbl + " it" + str(indextime[0]) |
---|
517 | if lbl == "": lbl = namefiles[index_f] |
---|
518 | |
---|
519 | if mrate is not None: x = y ## because swapaxes... |
---|
520 | #what_I_plot_frame = np.diff(what_I_plot_frame, n=1) ; x = x[1:] |
---|
521 | |
---|
522 | zeline = next(linecycler) ## "-" for simple lines |
---|
523 | if tile: zemarker = 'x' |
---|
524 | else: zemarker = None |
---|
525 | this_is_a_regular_plot = (indexvert is not None) or (indextime is None) or (indexlat is None) or (indexlon is None) |
---|
526 | if this_is_a_regular_plot: plot(x,what_I_plot_frame,zeline,label=lbl,marker=zemarker) ## vertical profile |
---|
527 | else: plot(what_I_plot_frame,x,zeline,label=lbl,marker=zemarker) ## regular plot |
---|
528 | if nplot > 1: legend(loc='best') |
---|
529 | if indextime is None and axtime is not None and xlab is None: xlabel(axtime.upper()) ## define the right label |
---|
530 | if save == 'txt': writeascii(np.transpose(what_I_plot),'profile'+str(nplot*1000+imov)+'.txt') |
---|
531 | |
---|
532 | elif which == "regular": |
---|
533 | if hole: what_I_plot_frame = hole_bounds(what_I_plot_frame,zevmin,zevmax) |
---|
534 | else: what_I_plot_frame = bounds(what_I_plot_frame,zevmin,zevmax) |
---|
535 | if flagnolow: what_I_plot_frame = nolow(what_I_plot_frame) |
---|
536 | if not tile: |
---|
537 | #zelevels = np.linspace(zevmin*(1. + 1.e-7),zevmax*(1. - 1.e-7)) #,num=20) |
---|
538 | zelevels = np.linspace(zevmin,zevmax,num=ticks) |
---|
539 | #what_I_plot_frame = smooth(what_I_plot_frame,100) |
---|
540 | if mapmode == 1: m.contourf( x, y, what_I_plot_frame, zelevels, cmap = palette, alpha=trans) |
---|
541 | elif mapmode == 0: contourf( x, y, what_I_plot_frame, zelevels, cmap = palette, alpha=trans) |
---|
542 | if cross is not None and mapmode == 1: |
---|
543 | idx,idy=m(cross[0][0],cross[0][1]) |
---|
544 | mpl.pyplot.plot([idx],[idy],'+k',mew=0.5,ms=18) |
---|
545 | else: |
---|
546 | if mapmode == 1: m.pcolor( x, y, what_I_plot_frame, cmap = palette, vmin=zevmin, vmax=zevmax, alpha=trans) |
---|
547 | elif mapmode == 0: pcolor( x, y, what_I_plot_frame, cmap = palette, vmin=zevmin, vmax=zevmax, alpha=trans) |
---|
548 | |
---|
549 | if colorb not in ['nobar','onebar']: |
---|
550 | if (fileref is not None) and (index_f == numplot-1): daformat = "%.3f" |
---|
551 | elif mult != 1: daformat = "%.1f" |
---|
552 | else: daformat = fmtvar(fvar.upper()) |
---|
553 | #if proj in ['moll','cyl']: zeorientation="horizontal" ; zepad = 0.05 |
---|
554 | if proj in ['moll']: zeorientation="horizontal" ; zepad = 0.05 |
---|
555 | else: zeorientation="vertical" ; zepad = 0.03 |
---|
556 | zecb = colorbar( fraction=0.05,pad=zepad,format=daformat,orientation=zeorientation,\ |
---|
557 | ticks=np.linspace(zevmin,zevmax,num=min([ticks/2+1,21])),extend='neither',spacing='proportional' ) |
---|
558 | if zeorientation == "horizontal" and zetitle[0] != "fill": zecb.ax.set_xlabel(zetitle[index_f]) ; zetitle[index_f]="" |
---|
559 | if winds: |
---|
560 | if typefile in ['meso']: |
---|
561 | [vecx_frame,vecy_frame] = [dumpbdy(vecx_frame,6,stag=uchar,condition=True), dumpbdy(vecy_frame,6,stag=vchar,condition=True)] |
---|
562 | key = True |
---|
563 | elif typefile in ['gcm']: |
---|
564 | key = False |
---|
565 | if metwind and mapmode == 1: [vecx_frame,vecy_frame] = m.rotate_vector(vecx_frame, vecy_frame, lon2d, lat2d) |
---|
566 | if var: colorvec = definecolorvec(back) |
---|
567 | else: colorvec = definecolorvec(colorb) |
---|
568 | vectorfield(vecx_frame, vecy_frame, x, y, stride=stride, csmooth=2,\ |
---|
569 | #scale=15., factor=300., color=colorvec, key=key) |
---|
570 | scale=20., factor=250., color=colorvec, key=key) |
---|
571 | #200. ## or csmooth=stride |
---|
572 | elif which == "contour": |
---|
573 | zevminc, zevmaxc = calculate_bounds(what_I_plot_frame, vmin=min(what_I_plot_frame), vmax=max(what_I_plot_frame)) |
---|
574 | zelevels = np.linspace(zevminc,zevmaxc,ticks/2) #20) |
---|
575 | if var2 == 'HGT': zelevels = np.arange(-10000.,30000.,1000.) |
---|
576 | if mapmode == 0: |
---|
577 | what_I_plot_frame, x, y = define_axis( lon,lat,vert,time,indexlon,indexlat,indexvert,\ |
---|
578 | itime,what_I_plot_frame, len(all_var2[index_f].shape),vertmode ) |
---|
579 | cs = contour( x,y,what_I_plot_frame, zelevels, colors='k', linewidths = 0.33, alpha=0.5, linestyles='solid') |
---|
580 | elif mapmode == 1: cs = m.contour( x,y,what_I_plot_frame, zelevels, colors='k', linewidths = 0.33, alpha=0.5, linestyles='solid') |
---|
581 | if which in ["regular","unidim"]: |
---|
582 | |
---|
583 | if nplot > 1 and which == "unidim": |
---|
584 | pass ## because we superimpose nplot instances |
---|
585 | else: |
---|
586 | # Axis directives for movie frames [including the first one). |
---|
587 | zxmin, zxmax = xaxis ; zymin, zymax = yaxis |
---|
588 | if zxmin is not None: mpl.pyplot.xlim(xmin=zxmin) |
---|
589 | if zxmax is not None: mpl.pyplot.xlim(xmax=zxmax) |
---|
590 | if zymin is not None: mpl.pyplot.ylim(ymin=zymin) |
---|
591 | if zymax is not None: mpl.pyplot.ylim(ymax=zymax) |
---|
592 | if ylog: mpl.pyplot.semilogy() |
---|
593 | if invert_y: ax = mpl.pyplot.gca() ; ax.set_ylim(ax.get_ylim()[::-1]) |
---|
594 | if xlab is not None: xlabel(xlab) |
---|
595 | if ylab is not None: ylabel(ylab) |
---|
596 | |
---|
597 | if mrate is not None: |
---|
598 | ### THIS IS A MENCODER MOVIE |
---|
599 | if mrate > 0: |
---|
600 | figframe=mpl.pyplot.gcf() |
---|
601 | if mquality: figframe.set_dpi(600.) |
---|
602 | else: figframe.set_dpi(200.) |
---|
603 | mframe=fig2img(figframe) |
---|
604 | if imov == 0: |
---|
605 | moviename='movie' ;W,H = figframe.canvas.get_width_height() |
---|
606 | video = VideoSink((H,W), moviename, rate=mrate, byteorder="rgba") |
---|
607 | video.run(mframe) ; close() |
---|
608 | if imov == iend: video.close() |
---|
609 | ### THIS IS A WEBPAGE MOVIE |
---|
610 | else: |
---|
611 | nameframe = "image"+str(1000+imov) |
---|
612 | makeplotres(nameframe,res=100.,disp=False) ; close() |
---|
613 | if imov == 0: myfile = open("zepics", 'w') |
---|
614 | myfile.write("modImages["+str(imov)+"] = '"+nameframe+"_100.png';"+ '\n') |
---|
615 | if imov == iend: |
---|
616 | myfile.write("first_image = 0;"+ '\n') |
---|
617 | myfile.write("last_image = "+str(iend)+";"+ '\n') |
---|
618 | myfile.close() |
---|
619 | if var2 and which == "regular": which = "contour" |
---|
620 | imov = imov+1 |
---|
621 | elif which == "contour": |
---|
622 | which = "regular" |
---|
623 | |
---|
624 | ### Next subplot |
---|
625 | zevarname = varname |
---|
626 | if redope is not None: zevarname = zevarname + "_" + redope |
---|
627 | basename = getname(var=zevarname,var2=var2,winds=winds,anomaly=anomaly) |
---|
628 | if len(what_I_plot.shape) > 3: |
---|
629 | basename = basename + getstralt(nc,level) |
---|
630 | if mrate is not None: basename = "movie_" + basename |
---|
631 | if typefile in ['meso']: |
---|
632 | if sslon is not None: basename = basename + "_lon_" + str(int(round(lonp))) |
---|
633 | if sslat is not None: basename = basename + "_lat_" + str(int(round(latp))) |
---|
634 | plottitle = basename |
---|
635 | ### dans le nouveau systeme time=ls,sol,lt cette ligne pourrait ne servir a rien (ou deplacer au dessus) |
---|
636 | if addchar and indextime is not None: [addchar,gogol,gogol2] = getlschar ( all_namefile[index_f] ) ; plottitle = plottitle + addchar |
---|
637 | ### en fait redope is None doit etre remplace par : n'est ni maxt ni mint |
---|
638 | if redope is None and ltst is not None and ( (mapmode == 0) or (proj in ["lcc","laea","merc","nsper"]) ): plottitle = plottitle + "_LT" + str(ltst) |
---|
639 | else: |
---|
640 | if fileref is not None: |
---|
641 | if index_f is numplot-1: plottitle = basename+' '+"fig(1) "+ope+" fig(2)" |
---|
642 | elif index_f is numplot-2: plottitle = basename+' '+fileref |
---|
643 | else: plottitle = basename+' '+namefiles[0]#index_f] |
---|
644 | else: plottitle = basename+' '+namefiles[0]#index_f] |
---|
645 | if mult != 1: plottitle = '{:.0e}'.format(mult) + "*" + plottitle |
---|
646 | if zetitle[0] != "fill": |
---|
647 | if index_f < len(zetitle): plottitle = zetitle[index_f] |
---|
648 | else: plottitle = zetitle[0] |
---|
649 | if titleref is "fill": titleref=zetitle[index_f] |
---|
650 | if fileref is not None: |
---|
651 | if index_f is numplot-2: plottitle = titleref |
---|
652 | if index_f is numplot-1: plottitle = "fig(1) "+ope+" fig(2)" |
---|
653 | # if indexlon is not None: plottitle = plottitle + " lon: " + str(min(lon[indexlon])) +" "+ str(max(lon[indexlon])) |
---|
654 | # if indexlat is not None: plottitle = plottitle + " lat: " + str(min(lat[indexlat])) +" "+ str(max(lat[indexlat])) |
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655 | # if indexvert is not None: plottitle = plottitle + " vert: " + str(min(vert[indexvert])) +" "+ str(max(vert[indexvert])) |
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656 | # if indextime is not None: plottitle = plottitle + " time: " + str(min(time[indextime])) +" "+ str(max(time[indextime])) |
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657 | if colorb != "onebar": title( plottitle ) |
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658 | if nplot >= numplot: error = True |
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659 | nplot += 1 |
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660 | |
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661 | if colorb == "onebar": |
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662 | cax = axes([0.1, 0.2, 0.8, 0.03]) # a ameliorer |
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663 | zecb = colorbar(cax=cax, orientation="horizontal", format=fmtvar(fvar.upper()),\ |
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664 | ticks=np.linspace(zevmin,zevmax,num=min([ticks/2+1,21])),extend='neither',spacing='proportional') |
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665 | if zetitle[0] != "fill": zecb.ax.set_xlabel(zetitle[index_f]) ; zetitle[index_f]="" |
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666 | |
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667 | |
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668 | ########################################################################## |
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669 | ### Save the figure in a file in the data folder or an user-defined folder |
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670 | if outputname is None: |
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671 | if typefile in ['meso']: prefix = getprefix(nc) |
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672 | elif typefile in ['gcm']: prefix = 'LMD_GCM_' |
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673 | else: prefix = '' |
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674 | ### |
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675 | zeplot = prefix + basename |
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676 | if addchar: zeplot = zeplot + addchar |
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677 | if numplot <= 0: zeplot = zeplot + "_LT"+str(abs(numplot)) |
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678 | ### |
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679 | if not target: zeplot = namefile[0:find(namefile,'wrfout')] + zeplot |
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680 | else: zeplot = target + "/" + zeplot |
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681 | ### |
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682 | else: |
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683 | zeplot=outputname |
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684 | |
---|
685 | if mrate is None: |
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686 | pad_inches_value = 0.35 |
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687 | print "********** SAVE ", save |
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688 | if save == 'png': |
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689 | if display: makeplotres(zeplot,res=100.,pad_inches_value=pad_inches_value) #,erase=True) ## a miniature |
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690 | makeplotres(zeplot,res=resolution,pad_inches_value=pad_inches_value,disp=False) |
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691 | elif save in ['eps','svg','pdf']: makeplotres(zeplot,pad_inches_value=pad_inches_value,disp=False,ext=save) |
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692 | elif save == 'gui': show() |
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693 | elif save == 'donothing': pass |
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694 | elif save == 'txt': print "Saved results in txt file." |
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695 | else: |
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696 | print "INFO: save mode not supported. using gui instead." |
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697 | show() |
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698 | |
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699 | ################################### |
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700 | #### Getting more out of this video -- PROBLEMS WITH CREATED VIDEOS |
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701 | # |
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702 | #if mrate is not None: |
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703 | # print "Re-encoding movie.. first pass" |
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704 | # video.first_pass(filename=moviename,quality=mquality,rate=mrate) |
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705 | # print "Re-encoding movie.. second pass" |
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706 | # video.second_pass(filename=moviename,quality=mquality,rate=mrate) |
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707 | |
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708 | ############### |
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709 | ### Now the end |
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710 | return zeplot |
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