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makemeso @ 2498

Last change on this file since 2498 was 2458, checked in by aslmd, 4 years ago
MESOSCALE Mars. same as previous commit (double compile physics) but for non-debug compile
Property svn:executable set to ``*
File size: 42.0 KB

Line
1	#! /bin/bash
2
3
4	##################################
5	# makemeso allows you to compile #
6	# WRF with modified LMD physics #
7	##################################
8
9	##############################
10	# Author: A. Spiga #
11	# New version : October 2008 #
12	# Last update : January 2009 #
13	# November 09 #
14	# January 11 #
15	##############################
16
17	###############################
18	#### Type makemeso -h for help
19	###############################
20
21	###path to compiled version of ioipsl on your system for generic physics
22	pathioipsl='/home/leconte/script/ioipsl/modipsl/lib'
23
24	##############################################################################################
25	##############################################################################################
26	##############################################################################################
27	##############################################################################################
28
29	donotcompile=0
30	donotallow=0
31	config='real'
32	donotcompilephys=0
33	justphys=0
34	debug=0
35	fresh_start=0
36	phys="mars_lmd"
37	scenario=""
38	from_scratch=0
39
40	while getopts "drc:njhgp:fs:xe" options; do
41	case $options in
42	d ) donotcompile=1;donotcompilephys=1;justphys=1;; ## just to check the compile folder
43	r ) donotallow=1;; ## allow only known config (useful with 'makemeso < last')
44	c ) config="${OPTARG}";; ## idealized cases
45	n ) donotcompilephys=1;; ## do not recompile physics
46	j ) justphys=1;; ## just compile LMD physics
47	g ) debug=1;; ## debug mode
48	p ) phys="${OPTARG}";; ## choose physics
49	f ) fresh_start=1;; ## a fresh start
50	e ) from_scratch=1;; ## a fresh start with a completely new folder
51	s ) scenario="${OPTARG}";; ## a specific scenario (with precompiling flags)
52	x ) donotcompile=1;phys="void_lmd_new";donotcompilephys=1;; ## a case with no LMD physics included
53	h ) echo "
54	# Use:
55	#
56	# makemeso ## basic use (real-case configuration)
57	#
58	# makemeso -d ## no compilation, just check the name of the compile folder
59	#
60	# makemeso -c ideal ## idealized mode (convective cell, mountain wave, etc...)
61	# makemeso -c les ## large-eddy simulations mode based on WRFV3
62	#
63	# makemeso -n ## do not recompile LMD physics (must have been compiled before)
64	#
65	# makemeso < last ## basic use + skip questions [! script must have been executed at least once]
66	# makemeso -r < last ## basic use + skip questions + only known config
67	# makemeso -nr < last ## basic use + skip questions + only known config + no LMD phys recompile
68	#
69	# makemeso -j ## just compile the LMD physics
70	#
71	# makemeso -g ## debug mode
72	#
73	# makemeso -h ## display options
74	#
75	# makemeso -p mars_lmd_new ## choose physics
76	# venus_lmd_new
77	# generic_lmd_new
78	# titan_lmd_new
79	#
80	# makemeso -f ## fresh start [clean -a]
81	#
82	# makemeso -e ## a completely new recompile with erasing the WHOLE compiling folder
83	#
84	# makemeso -s DUSTSTORM ## a specific scenario (with precompiling flags)
85	#
86	# makemeso -x ## a case with no LMD physics included
87	" ; exit ;;
88	esac
89	done
90
91	#--------------
92	# talk w/ user
93	#--------------
94	echo '****************************************'
95	echo ' LMD Mesoscale Model Compiler. Welcome.'
96	echo '****************************************'
97	if [[ "${phys}" == "new" ]]
98	then
99	echo '*********** PHYSICS: ' ${phys}
100	echo '****************************************'
101	fi
102	# computer
103	uname -a \| grep x86_64 > /dev/null
104	if [[ "$?" == 0 ]]
105	then
106	machine='64'
107	else
108	machine='32'
109	fi
110	# compiler
111	echo "Supported compiler options are "
112	echo " <1> pgf90"
113	echo " <2> g95"
114	echo " <3> pgf90 + mpi"
115	echo " <4> ifort"
116	echo " <5> ifort + mpi"
117	echo " <7> xlf + mpi (IBM AIX)"
118	echo " <8> gfortran"
119	echo " <9> gfortran + openmpi"
120	echo "Your choice ?" ; read reply
121	case ${reply} in
122	1) compilo='pgf' ; numproc=1 ;;
123	2) compilo='g95' ; numproc=1 ;;
124	3) compilo='mpi'
125	if [[ "${WHERE_MPI}" = "" ]]
126	then
127	echo Please initialize the variable WHERE_MPI in your environnement
128	exit
129	fi ;;
130	4) compilo='ifort' ; numproc=1 ;;
131	5) compilo='mpifort' ;;
132	7) compilo='mpixlf' ;;
133	8) compilo='gnu' ; numproc=1 ;;
134	9) compilo='openmpi';;
135	*) echo not supported by this script ; exit ;;
136	esac
137	# number of processors
138	if [[ "${phys}" == "new" ]]
139	then
140	numproc=999
141	else
142	case ${reply} in
143	3) echo How many processors ? e.g. 1, 2, 4, 6, 8, 12, 16, 20, 24, 32, 64, 128 ; read numproc ;;
144	5) echo How many processors ? e.g. 1, 2, 4, 6, 8, 12, 16, 20, 24, 32, 64, 128 ; read numproc ;;
145	7) echo How many processors ? e.g. 1, 2, 4, 6, 8, 12, 16, 20, 24, 32, 64, 128 ; read numproc ;;
146	esac
147	fi
148
149	# dimensions
150	if [ ${donotcompile} -eq 0 ]
151	then
152	# ngrid: now dynamically set in newphys 03/2014
153	if [[ "${phys}" == "new" ]]
154	then
155	lon=999
156	lat=999
157	level=999
158	else
159	echo Grid points in longitude ? ; read lon
160	echo Grid points in latitude ? ; read lat
161	echo Number of vertical levels ? ; read level
162	fi
163	fi
164	echo Number of domains ? ; read dom
165
166	###PB lecture dom si < last
167
168	case ${dom} in
169	1) single='_single' ;;
170	*) single='_nest' ;;
171	esac
172	if [ "${compilo}" = "mpi" -o "${compilo}" = "mpifort" -o "${compilo}" = "mpixlf" ]
173	then
174	single=''
175	fi
176
177	testflag=''
178	####
179	#testflag='_test'
180	####
181
182	conf_wrf="${phys}_${config}${scenario}_${compilo}_${machine}${single}${testflag}"
183
184	if [ ${debug} -eq 1 ]
185	then
186	conf_wrf="debug_${conf_wrf}"
187	fi
188
189	\rm what_folder 2> /dev/null
190	echo ${conf_wrf} > what_folder
191	if [ ${donotcompile} -eq 0 ]
192	then
193	##\rm what_folder 2> /dev/null
194	##echo '**********************'
195	##echo '*** Your folder is ...'
196	##echo '**********************'
197	##echo ${conf_wrf} \| tee what_folder
198	##cat what_folder
199	##echo ${conf_wrf} > what_folder
200	##echo ${reply} > what_compilo
201	##echo ${numproc} > what_numproc
202	#if [[ "${phys}" != "nophys_" ]]
203	#then
204	# exit
205	#fi
206	#else
207	# tracers: now dynamically set in newphys 09/2013
208	if [[ "${phys}" == "new" ]]
209	then
210	tra=999
211	else
212	echo Number of tracers ? ; read tra
213	if [ ${tra} -eq 0 ]
214	then
215	tra=1
216	fi
217	fi
218	fi
219	# 'from scratch' case
220	if [ ${from_scratch} -eq 1 ]
221	then
222	echo "***** I ERASE THE FOLDER "${conf_wrf}
223	\rm -rf ${conf_wrf}
224	fi
225	# folder
226
227	mkdir ${conf_wrf} 2> /dev/null
228	if [[ "$?" == 0 ]]
229	then
230	echo new folder ... link sources
231	###############################################
232	echo ${phys}
233	./SRC/SCRIPTS/copy_model -p ${phys} -c ${config}
234	mv zeWRFV2 ${conf_wrf}/WRFV2
235	###############################################
236	if [[ "${phys}" == "new" ]]
237	then
238	cd ${conf_wrf}/WRFV2
239	if [[ "${config}" != "les" ]]
240	then
241	cp ../../SRC/WRFV2/Registry/Registry.EM.newphys Registry/Registry.EM
242	else
243	cp -L ../../SRC/LES/WRFV2/Registry/Registry.EM.newphys Registry/Registry.EM
244	fi
245	cd phys
246	ln -sf module_lmd_driver.F.new module_lmd_driver.F
247	cd ..
248
249	else
250	cd ${conf_wrf}/WRFV2
251	cd Registry ; ./Registry.bash ; cd ..
252	fi
253	#### sparadrap consequent a l'utilisation de copy_model pour les liens
254	#### -- car alors il manque fftpack
255	if [[ "${config}" == "les" ]]
256	then
257	cp ../../SRC/LES/correcfft ./
258	./correcfft
259	\rm correcfft
260	fi
261	else
262	cd ${conf_wrf}/WRFV2
263	if [ ${fresh_start} -eq 1 ]
264	then
265	echo '*** FRESH START, I clean everything'
266	### clean the whole place
267	clean -a > /dev/null 2> /dev/null
268	### get a possibly modified registry !
269	if [[ "${phys}" == "new" ]]
270	then
271	cp ../../SRC/WRFV2/Registry/Registry.EM.newphys Registry/Registry.EM
272	else
273	cp ../../SRC/WRFV2/Registry/Registry.EM Registry/
274	fi
275	if [[ "${config}" == "les" ]]
276	then
277	cp ../../SRC/LES/WRFV2/Registry/Registry.EM Registry/
278	fi
279	### ensure the model will be recompiled from scratch with correct registry
280	cd Registry ; mv Registry Registry.bak ; Registry.bash ; cd ..
281	# answer='y' ## a voir... pas si sur
282	# else
283	# if [[ "${phys}" != "nophys_" ]]
284	# then
285	# echo Did you modify anything in the Registry or clean ? y for yes, any key for no ; read answer
286	# case ${answer} in
287	# y) cd Registry ; mv Registry Registry.bak ; Registry.bash ; cd .. ;;
288	# *) answer='no' ;;
289	# esac
290	# fi
291	fi
292	fi
293
294	# summary
295	echo '**********************'
296	echo '*** Your folder is ...'
297	echo '**********************'
298	echo ${conf_wrf}
299	echo '**********************'
300	echo '****************************************'
301	echo so ...
302	echo your computer is ${machine} bits
303	echo ${compilo} is your compiler
304	if [[ "${compilo}" = "mpi" ]]
305	then
306	echo MPICH is in ${WHERE_MPI}
307	fi
308	echo you have ${dom} domains
309	if [[ "${phys}" == "new" ]]
310	then
311	echo number of processors can be changed without recompiling
312	echo x points can be changed without recompiling
313	echo y points can be changed without recompiling
314	echo z points can be changed without recompiling
315	echo number of tracers can be changed without recompiling
316	else
317	echo you will use ${numproc} processors
318	echo you have ${lon} x points
319	echo ' '${lat} y points
320	echo ' '${level} z points
321	echo ' '${tra} tracers
322	fi
323	echo '****************************************'
324	# save answer
325	\rm last 2> /dev/null
326	touch last
327	echo ${reply} >> last
328	if [[ "${phys}" != "new" ]]
329	then
330	if [ "${compilo}" = "mpi" -o "${compilo}" = "mpifort" -o "${compilo}" = "mpixlf" ]
331	then
332	echo ${numproc} >> last
333	fi
334	echo ${lon} >> last
335	echo ${lat} >> last
336	echo ${level} >> last
337	fi
338	echo ${dom} >> last
339	if [[ "${phys}" != *"new" ]]
340	then
341	echo ${tra} >> last
342	fi
343
344	#------------
345	# log files
346	#------------
347	\rm log_compile 2> /dev/null
348	\rm log_error 2> /dev/null
349
350	#-----------------
351	# configure WRF
352	#-----------------
353	mv configure.wrf configure.wrf.bak 2> /dev/null
354	########################
355	conf_wrf_forall="${compilo}_${machine}${single}${testflag}"
356
357	#### in this case options are different because for LES, WRFV3 is used
358	if [[ "${config}" == "les" ]]
359	then
360	conf_wrf_forall="${config}${compilo}_${machine}${single}${testflag}"
361	fi
362
363	case ${conf_wrf_forall} in
364
365	#######LES-specific (WRFV3-based) -- previously in 'makeles'
366	#######
367
368	lesmpi_64) ## MPI (dm) 64 bits [PS: remplacer 3 par 4 pour openMP]
369	\rm conf > /dev/null 2> /dev/null ; touch conf ; echo 3 >> conf ; echo 1 >> conf
370	\rm configure.wrf > /dev/null 2> /dev/null ; ./configure < conf > /dev/null 2> /dev/null
371	sed s+"-lnetcdf"+"-lnetcdf -L../$phys/libo -llmd"+g configure.wrf > yeah ; mv -f yeah configure.wrf
372	if [[ "$(hostname)" == "ciclad1.ipsl.jussieu.fr" ]]
373	then
374	echo "SPECIFIC CHANGES FOR CICLAD CLUSTER. EDIT makemeso IF YOU ENCOUNTER PROBLEMS."
375	#sed s+"mpif90 -f90=$(SFC)"+"/usr/lib64/openmpi/1.4.2-pgf/bin/mpif90"+g configure.wrf > yeah ; mv -f yeah configure.wrf
376	#sed s+"mpicc -cc=$(SCC)"+"/usr/lib64/openmpi/1.4.2-gfortran/bin/mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
377	sed s+"mpif90 -f90=\$(SFC)"+"/usr/lib64/openmpi/1.4.3-pgfgcc/bin/mpif90"+g configure.wrf > yeah ; mv -f yeah configure.wrf
378	sed s+"mpicc -cc=\$(SCC)"+"/usr/lib64/openmpi/1.4.3-pgfgcc/bin/mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
379	else
380	#sed s+"mpif90"+"$WHERE_MPI/mpif90"+g configure.wrf > yeah ; mv -f yeah configure.wrf
381	#sed s+"mpicc"+"$WHERE_MPI/mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
382	#### OPENMPI
383	sed s+"mpif90 -f90=\$(SFC)"+"$WHERE_MPI/mpif90"+g configure.wrf > yeah ; mv -f yeah configure.wrf
384	sed s+"mpicc -cc=\$(SCC)"+"$WHERE_MPI/mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
385	fi
386	sed s+"-fastsse"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
387	### pas forcement necessaire ici mais OK
388	sed s+"-llmd"+"-llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
389	\rm conf > /dev/null ;;
390
391	lesmpifort_64) ## MPI (dm) 64 bits IFORT
392	\rm conf > /dev/null 2> /dev/null ; touch conf ; echo 7 >> conf ; echo 1 >> conf
393	\rm configure.wrf > /dev/null 2> /dev/null ; ./configure < conf > /dev/null 2> /dev/null
394	if [[ "${phys}" != "void" ]]
395	then
396	sed s+"-lnetcdff"+"TOZTOZ"+g configure.wrf > yeah ; mv -f yeah configure.wrf
397	# ... in case there is netcdff save it in TOZTOZ so that it is not impacted in the following sed
398	sed s+"-lnetcdf"+"-lnetcdf -L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
399	sed s+"TOZTOZ"+"-lnetcdff"+g configure.wrf > yeah ; mv -f yeah configure.wrf
400	else
401	sed s+"-lnetcdf"+"-lnetcdf $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
402	fi
403	sed s+"mpif90"+"$WHERE_MPI/mpif90"+g configure.wrf > yeah ; mv -f yeah configure.wrf
404	sed s+"mpicc"+"$WHERE_MPI/mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
405	sed s+"-fastsse"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
406	sed s+"O3"+"O3 -mcmodel=large -shared-intel"+g configure.wrf > yeah ; mv -f yeah configure.wrf
407	#sed s+"-lnetcdf -lnetcdff"+"-lnetcdf -lnetcdff -L../mars_lmd/libo -llmd"+g configure.wrf > yeah ; mv -f yeah configure.wrf
408	if [ ${debug} -ne 0 ] # not working for xlf!
409	then
410	echo 'DEBUG DEBUG DEBUG DEBUG'
411	sed s+"# -g"+" -g -no-ftz -traceback -ftrapuv -fp-stack-check -check"+g configure.wrf > yeah
412	mv -f yeah configure.wrf
413	fi
414	\rm conf > /dev/null ;;
415
416	lesopenmpi_64_single) echo Special option...
417	\rm conf > /dev/null 2> /dev/null ; touch conf ; echo 13 >> conf ; echo 0 >> conf
418	configure < conf > log_compile 2> log_error
419	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
420	sed s+"-lnetcdff"+'-lnetcdff -I$(WRF_SRC_ROOT_DIR)/inc'+g configure.wrf > yeah ; mv -f yeah configure.wrf ;;
421
422	lesgnu_64_single) echo Special option...
423	\rm conf > /dev/null 2> /dev/null ; touch conf ; echo 11 >> conf ; echo 0 >> conf
424	configure < conf > log_compile 2> log_error
425	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
426	sed s+"-lnetcdff"+'-lnetcdff -I$(WRF_SRC_ROOT_DIR)/inc'+g configure.wrf > yeah ; mv -f yeah configure.wrf ;;
427	#######
428	#######LES-specific (WRFV3-based) -- previously in 'makeles'
429
430	# GFORTRAN, 64 bits, no nesting
431	gnu_64_single) cd arch ; ln -sf ../configure.defaults.gfortran64 configure.defaults ; cd ..
432	echo 15 \| configure > log_compile 2> log_error
433	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
434	sed s+"-L../$phys/libo -llmd"+"-lnetcdf -lnetcdff -L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf ;;
435	# PGF90, 32 bits, no nesting
436	pgf_32_single) echo 1 \| configure > log_compile 2> log_error
437	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
438	# PGF90, 32 bits, nesting
439	pgf_32_nest) echo 2 \| configure > log_compile 2> log_error
440	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
441	# PGF90, 64 bits, no nesting
442	pgf_64_single) echo 1 \| configure > log_compile 2> log_error
443	#### the following line is necessary because readtesassim has a line "use netcdf" in it!
444	#sed s+"-L../$phys/libo -llmd"+"-L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
445	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
446	# PGF90, 64 bits, nesting
447	pgf_64_nest) cd arch ; ln -sf ../configure.defaults.fix64nest configure.defaults ; cd ..
448	echo 4 \| configure > log_compile 2> log_error
449	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
450	# G95, 32 bits, no nesting
451	g95_32_single) echo 13 \| configure > log_compile 2> log_error
452	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
453	# G95, 64 bits, no nesting ### we modify configure.defaults to add x86_64 next to g95 in the header comment
454	g95_64_single) cd arch ; sed s/"PC Linux i486 i586 i686, g95 compiler"/"PC Linux i486 i586 i686 x86_64, g95 compiler"/g configure.defaults > yeahyeahyeah ; rm configure.defaults ; mv yeahyeahyeah configure.defaults ; cd ..
455	echo 14 \| configure > log_compile 2> log_error
456	##### marche pas ....
457	#sed s+"-fno-second-underscore"+""+g configure.wrf > yeah ; mv -f yeah configure.wrf
458	#sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
459	#sed s+"-L../$phys/libo -llmd"+"-L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf ;;
460	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
461	#sed s+"= g95"+"= /home/physastro/aspiga/mysoft/g95/g95-install/bin/x86_64-unknown-linux-gnu-g95"+g configure.wrf > yeah ; mv -f yeah configure.wrf;;
462	# IFORT, 64 bits, no nesting
463	ifort_64_single) echo 5 \| configure > log_compile 2> log_error
464	sed s+"-DIFORT_KLUDGE"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
465	if [ ${debug} -ne 0 ] # not working for xlf!
466	then
467	echo 'DEBUG DEBUG DEBUG DEBUG'
468	sed s+"# -g"+" -g -no-ftz -traceback -ftrapuv -fp-stack-check -check"+g configure.wrf > yeah
469	mv -f yeah configure.wrf
470	fi
471	## !!! NETCDF must be defined
472	sed s+"lio_grib_share"+"lio_grib_share -L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah
473	mv -f yeah configure.wrf ;;
474	mpifort_64) # MPI+IFORT, 64 bits, no nesting / nesting
475	echo 9 \| ./configure > log_compile 2> log_error
476	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
477	sed s+"-f90=ifort"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
478	sed s+"-cc=icc"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
479	sed s+"-DIFORT_KLUDGE"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
480	sed s+"-O1"+"-O1 -mcmodel=medium -shared-intel"+g configure.wrf > yeah ; mv -f yeah configure.wrf
481	sed s+"-O2"+"-O2 -mcmodel=medium -shared-intel"+g configure.wrf > yeah ; mv -f yeah configure.wrf
482	sed s+"-O3"+"-O3 -mcmodel=medium -shared-intel"+g configure.wrf > yeah ; mv -f yeah configure.wrf
483	if [ ${debug} -ne 0 ] # not working for xlf!
484	then
485	echo 'DEBUG DEBUG DEBUG DEBUG'
486	sed s+"#-g"+" -g -no-ftz -traceback -ftrapuv -fp-stack-check -check"+g configure.wrf > yeah
487	mv -f yeah configure.wrf
488	fi
489	sed s+"O3"+"O2"+g configure.wrf > yeah ; mv -f yeah configure.wrf
490	#sed s+"O3"+"O0"+g configure.wrf > yeah ; mv -f yeah configure.wrf ### pour compilation rapide
491	#-w -ftz -align all -fno-alias -fp-model precise >>> options indiquees dans WRF3
492	#http://software.intel.com/en-us/articles/performance-tools-for-software-developers-building-wrf-with-the-intel-compilers/
493	#### NB: RSL is replaced by RSL_LITE, better memory capacity, less seg fault
494	sed s+"../external/RSL/RSL"+"../external/RSL_LITE"+g configure.wrf > yeah ; mv -f yeah configure.wrf
495	sed s+"-DWRF_RSL_IO"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
496	sed s+"-DRSL"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
497	sed s+"librsl.a"+"librsl_lite.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
498	sed s+"../external/RSL/gen"+"../external/RSL_LITE/gen"+g configure.wrf > yeah ; mv -f yeah configure.wrf
499	sed s+"../external/RSL/module"+"../external/RSL_LITE/module"+g configure.wrf > yeah ; mv -f yeah configure.wrf
500	sed s+"-lrsl"+"-lrsl_lite"+g configure.wrf > yeah ; mv -f yeah configure.wrf
501	sed s+"linux"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
502	### necessary even if mpi-selector is used (no need in makegcm though)
503	sed s+"mpif90"+"${WHERE_MPI}/mpif90"+g configure.wrf \| sed s+"mpicc"+"${WHERE_MPI}/mpicc"+g > yeah ; mv -f yeah configure.wrf
504	sed s+"mpicc"+"mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
505	## !!! NETCDF must be defined
506	if [[ "${phys}" != "void" ]]
507	then
508	sed s+"-L../$phys/libo -llmd"+"-L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah
509	else
510	sed s+"-lesmf_time"+"-lesmf_time $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah
511	fi
512	mv -f yeah configure.wrf
513	#### POUR LE TRAITEMENT PARTICULIERS des NESTS sur iDATAPLEX [cf. module_lmd_driver]
514	sed s+"ARCHFLAGS = "+"ARCHFLAGS = -DSPECIAL_NEST_SAVE "+g configure.wrf > yeah
515	mv -f yeah configure.wrf ;;
516	# MPICH, 64 bits, no nesting / nesting
517	mpi_64) cd arch ; ln -sf ../configure.defaults.fix64nest configure.defaults ; cd ..
518	echo 3 \| configure > log_compile 2> log_error
519	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
520	### the following line is necessary because readtesassim has a line "use netcdf" in it!
521	sed s+"-L../$phys/libo -llmd"+"-L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
522	sed s+"mpif90"+"${WHERE_MPI}/mpif90"+g configure.wrf \| sed s+"mpicc"+"${WHERE_MPI}/mpicc"+g \| sed s+"mpicc"+"mpicc -DMPI2_SUPPORT"+g > yeah
523	#sed s+"mpif90"+"${WHERE_MPI}/mpif90"+g configure.wrf \| sed s+"mpicc"+"${WHERE_MPI}/mpicc"+g \| sed s+"mpicc"+"mpicc -DMPI2_SUPPORT -w -O3"+g > yeah
524	#\| sed s+"fastsse"+"fast"+g > yeah
525	mv -f yeah configure.wrf ;;
526	# #sed s+"-fastsse"+"-O2 -Munroll -Mcache_align"+g configure.wrf > yeah
527	# ##sed s+"-fastsse"+"-O2 -fpic"+g configure.wrf > yeah ## marche pas, ILM problem
528	# ##sed s+"-fastsse"+"-mcmodel=medium -Mlarge_arrays"+g configure.wrf > yeah ## marche pas, ILM problem
529	#sed s+"-fastsse"+"-O3 -tp=nehalem-64 -fastsse -Mscalarsse -Mvect=sse -Mipa=fast"+g configure.wrf > yeah
530	#sed s+"-fastsse"+"-O2 -Munroll -Mcache_align"+g configure.wrf > yeah
531	#sed s+"-fastsse"+""+g configure.wrf > yeah
532	#sed s+"-fastsse"+"-fast"+g configure.wrf > yeah
533	#sed s+"-fastsse"+"-Mvect=noaltcode -Msmartalloc -Mprefetch=distance:8 -Mfprelaxed"+g configure.wrf > yeah
534	#mv -f yeah configure.wrf ;;
535	# MPICH, 64 bits, OK with periodic BC but no positive definite
536	mpi_64_test) cd arch ; ln -sf ../configure.defaults.fix64nest configure.defaults ; cd ..
537	echo 2 \| configure > log_compile 2> log_error
538	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
539	sed s+"mpif90"+"${WHERE_MPI}/mpif90"+g configure.wrf \| sed s+"mpicc"+"${WHERE_MPI}/mpicc"+g \| sed s+"mpicc"+"mpicc -DMPI2_SUPPORT"+g > yeah
540	mv -f yeah configure.wrf ;;
541	# XLF+MPICH on AIX machine (64 bits) with nesting, NB: the 32bits notice is not to be considered
542	mpixlf_32) cd arch ; ln -sf ../configure.defaults.fix64nest configure.defaults ; cd ..
543	echo 3 \| configure > log_compile 2> log_error
544	sed -f physics.sed configure.wrf > yeah
545	mv -f yeah configure.wrf ;;
546	# ANYTHING ELSE
547	*) echo NO PRESETS ...
548	if [ ${donotallow} -eq 0 ]
549	then
550	configure
551	else
552	# problem when an input file is used
553	echo 'please cd to '$PWD' and type ./configure'
554	exit
555	fi ;;
556	esac
557	########################
558
559
560	### here a case structure would be great
561
562	if [[ "${phys}" == "new" ]]
563	then
564	if [[ "${config}" == "les" ]] ### LES is different because of WRFV3
565	then
566	sed s+"ARCH_LOCAL = "+"ARCH_LOCAL = -DNEWPHYS "+g configure.wrf > yeah
567	else
568	sed s+"ARCHFLAGS = "+"ARCHFLAGS = -DNEWPHYS "+g configure.wrf > yeah
569	fi
570	mv -f yeah configure.wrf
571	fi
572
573	### SCENARIO SCENARIO SCENARIO
574	if [[ ! ("${scenario}" == "") ]] ### not supported with LES for the moment?
575	then
576	# precompiling flag in WRF part
577	sed s+"ARCHFLAGS = "+"ARCHFLAGS = -D${scenario} "+g configure.wrf > yeah
578	mv -f yeah configure.wrf
579	# precompiling flag in LMD part
580	cd $phys
581	cp -Lrf makegcm_${compilo} yeah
582	\rm makegcm_${compilo}
583	sed s+"-DMESOSCALE"+"-D${scenario} -DMESOSCALE"+ yeah > makegcm_${compilo}
584	chmod 755 makegcm_${compilo}
585	\rm yeah
586	cd ..
587	fi
588
589	################
590	#if [[ "${phys}" == "nophys_" ]]
591	#then
592	# if [[ "${config}" == "les" ]] ### LES is different because of WRFV3
593	# then
594	# sed s+"ARCH_LOCAL = "+"ARCH_LOCAL = -DNOPHYS "+g configure.wrf > yeah ; mv -f yeah configure.wrf
595	# sed s+"-L../$phys/libo -llmd"+""+g configure.wrf > yeah ; mv -f yeah configure.wrf
596	# else
597	# ### not tested yet but should be working
598	# echo CAUTION CAUTION CAUTION NOT FULLY TESTED
599	# sed s+"ARCHFLAGS = "+"ARCHFLAGS = -DNOPHYS "+g configure.wrf > yeah ; mv -f yeah configure.wrf
600	# sed s+"-L../$phys/libo -llmd"+""+g configure.wrf > yeah ; mv -f yeah configure.wrf
601	# fi
602	#fi
603	################
604
605	if [[ "${phys}" == "venus" ]]
606	then
607	sed s+"LIB_BUNDLED = "+"LIB_BUNDLED = /usr/lib64/liblapack.so \ "+g configure.wrf > yeah ; mv -f yeah configure.wrf
608	fi
609
610	if [ ${debug} -ne 0 ] # not working for xlf!
611	then
612	echo 'DEBUG DEBUG DEBUG DEBUG'
613	sed s+"# -g"+" -g -no-ftz -traceback -ftrapuv -fp-stack-check -check"+g configure.wrf > yeah
614	#sed s+"# -g"+"-g -Ktrap=fp -Mbounds"+g configure.wrf > yeah
615	#sed s+"# -g"+"-g"+g configure.wrf > yeah
616	mv -f yeah configure.wrf
617	fi
618
619	if [[ "${phys}" == "prescribed" ]]
620	then
621	donotcompilephys=1
622	fi
623
624	# some compiler and environment mess things up when using -C
625	sed s+"-C"+""+g configure.wrf > yeah ; mv -f yeah configure.wrf
626
627	#exit
628	##################################################
629	# compile physics
630	##################################################
631	if [ ${donotcompilephys} -eq 0 ] #\|\| [[ "${phys}" != "prescribed" ]]
632	then
633
634	cd $phys/
635
636	if [[ "${phys}" == "new" ]]
637	then
638	divx=1
639	divy=1
640	else
641	# required size
642	#----------------
643	case ${numproc} in
644	1) divx=1 ; divy=1 ;;
645	2) divx=1 ; divy=2 ;;
646	4) divx=2 ; divy=2 ;;
647	6) divx=2 ; divy=3 ;;
648	8) divx=2 ; divy=4 ;;
649	12) divx=3 ; divy=4 ;;
650	16) divx=4 ; divy=4 ;;
651	20) divx=4 ; divy=5 ;;
652	24) divx=4 ; divy=6 ;;
653	32) divx=4 ; divy=8 ;;
654	64) divx=8 ; divy=8 ;;
655	128) divx=8 ; divy=16 ;;
656	*) echo not yet supported ; exit ;;
657	esac
658	fi
659	physx=$(expr ${lon} - 1)
660	restex=$(expr ${physx} \% ${divx})
661	physy=$(expr ${lat} - 1)
662	restey=$(expr ${physy} \% ${divy})
663	if [[ ${restex} != 0 \|\| ${restey} != 0 ]]
664	then
665	echo nx-1 shall be divided by ${divx}
666	echo ny-1 shall be divided by ${divy}
667	exit
668	fi
669	physx=$(expr ${physx} \/ ${divx})
670	physy=$(expr ${physy} \/ ${divy})
671	physz=$(expr ${level} - 1)
672
673	# change this if you change num_soil_layers in WRF
674	# -- default is 10
675	if [[ "${phys}" == "new" ]]
676	then
677	soilsize=18 ## nouvelle physique. ne sert a rien ici. voir comsoil.
678	else
679	soilsize=10
680	fi
681
682	# GCM environment variables
683	#--------------------------
684	export LMDGCM=$PWD
685	export LIBOGCM=$PWD/libo
686
687	# generate the appropriate dimphys
688	#---------------------------------
689	if [[ "${phys}" == "mars" ]]
690	then
691	cd libf/phymars
692	elif [[ "${phys}" == "venus" ]]
693	then
694	cd libf/phyvenus
695	elif [[ "${phys}" == "generic" ]]
696	then
697	cd libf/phystd
698	elif [[ "${phys}" == "titan" ]]
699	then
700	cd libf/phytitan
701	fi
702	\rm dimphys.h 2> /dev/null
703	# if [[ "${phys}" == "newphys_" ]]
704	# then
705	# ln -sf ../../meso_dimphys.h_ref . ## ne sert plus !!
706	# else
707	if [[ "${phys}" == "mars_lmd" ]]
708	then
709	physize=$(expr ${physx} \* ${physy})
710	sed s/--xsize--/${physx}/g meso_dimphys.h_ref \| sed s/--ysize--/${physy}/g \| sed s/--physize--/${physize}/g \| sed s/--zsize--/${physz}/g \| sed s/--soilsize--/${soilsize}/g > dimphys.h
711	head -15 dimphys.h
712	fi
713	#### TEST new new phys
714	#if [[ "${phys}" == "newphys_" ]]
715	#then
716	# touch gr_fi_dyn.F.lien
717	# ln -sf ../dyn3d/gr_fi_dyn.F . ## dommage, a corriger
718	################################
719	################################
720	################################
721	#fi
722	####
723	####
724	cd ../..
725
726	# prepare for nesting
727	#---------------------
728	cd libf
729	duplicate${dom} 2> /dev/null
730	cd ..
731
732	# compile physics
733	#--------------------------
734	\rm libf/grid/dimensions.h 2> /dev/null
735	\rm -rf libo/* 2> /dev/null
736	echo 1. compiling LMD physics ...
737	echo compilation info in:
738	echo $PWD/libo/log_compile_phys
739
740	if [ ${debug} -ne 0 ]
741	then
742	if [[ "${phys}" == "mars" ]]
743	then
744	echo 'DEBUG DEBUG DEBUG DEBUG'
745	nohup makegcm_${compilo} -debug -full -t ${tra} -p mars -d ${physz} testphys1d \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
746	nohup makegcm_${compilo} -debug -full -t ${tra} -p mars -d ${physz} testphys1d \| tee libo/log_compile_phys2 \| grep 'warnings' >> libo/log_compile_phys2
747	elif [[ "${phys}" == "venus" ]]
748	then
749	echo 'DEBUG DEBUG DEBUG DEBUG'
750	nohup ./makelmdz -debug -full -p venus -d 51 rcm1d -arch linux-ifort -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys # on /u/ and /planeto/
751	nohup ./makelmdz --debug p venus -d 51 rcm1d -arch linux-ifort -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
752	elif [[ "${phys}" == "generic" ]]
753	then
754	echo 'DEBUG DEBUG DEBUG DEBUG'
755	nohup ./makelmdz -debug -t ${tra} -p std -b 36x32 -s 1 -d 25 rcm1d -arch X64_MESU -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys #Proxb
756	elif [[ "${phys}" == "titan" ]]
757	then
758	echo 'DEBUG DEBUG DEBUG DEBUG'
759	nohup makelmdz -debug -full -t ${tra} -p titan -b 23x23 -d 25 rcm1d -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
760	fi
761	else
762	if [[ "${phys}" == "mars" ]]
763	then
764	nohup makegcm_${compilo} -t ${tra} -p mars -d ${physz} testphys1d \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
765	nohup makegcm_${compilo} -t ${tra} -p mars -d ${physz} testphys1d \| tee libo/log_compile_phys2 \| grep 'warnings' >> libo/log_compile_phys2
766	elif [[ "${phys}" == "venus" ]]
767	then
768	nohup ./makelmdz -full -p venus -d 51 rcm1d -arch linux-ifort_meso -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys # on /u/ and /planeto/
769	nohup ./makelmdz -p venus -d 51 rcm1d -arch linux-ifort_meso -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
770	#nohup ./makelmdz -full -p venus -d 51 rcm1d -arch CICLADifort -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys # on CICLAD
771	#nohup ./makelmdz -p venus -d 51 rcm1d -arch CICLADifort -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
772	#nohup ./makelmdz -full -p venus -d 51 rcm1d -arch X64_MESU -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys #on MESU
773	#nohup ./makelmdz -p venus -d 51 rcm1d -arch X64_MESU -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
774	#nohup makelmdz -full -p venus -d 51 rcm1d -arch X64_OCCIGEN -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys #on OCCIGEN
775	#nohup makelmdz -p venus -d 51 rcm1d -arch X64_OCCIGEN -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
776	elif [[ "${phys}" == "generic" ]]
777	then
778	echo $PWD/libo/log_compile_phys2
779	nohup ./makelmdz -t 1 -p std -b 38x36 -full -s 1 -d 25 rcm1d -arch mascaret_gfortran_para -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys #Proxb
780	nohup ./makelmdz -t 1 -p std -b 38x36 -s 1 -d 25 rcm1d -arch mascaret_gfortran_para -cpp MESOSCALE \| tee libo/log_compile_phys2 \| grep 'warnings' >> libo/log_compile_phys2 #Proxb
781	elif [[ "${phys}" == "titan" ]]
782	then
783	nohup makelmdz -full -t ${tra} -p titan -b 23x23 -d 25 rcm1d -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
784	fi
785	fi
786	echo ... done
787	# clean the duplicate routines
788	cd libf
789	duplicate1 2> /dev/null
790	cd ..
791
792	# merge LMD executables in one lib
793	#--------------------------------------
794	cd libo
795	mkdir temp
796	if [[ "${phys}" == "mars" ]]
797	then
798	cp -f LINUX/.a temp
799	else #VENUS and GENERIC
800	# cp -f linux/.a temp/ # on /u/ and /planeto/
801	cp -f /.a temp/ # on /u/ and /planeto/
802	#cp -f /home/mlefevre/modipsl/lib/libioipsl.a temp/ #on CICLAD
803	#cp -f X64/.a temp #on MESU and OCCIGEN
804	cp -f $pathioipsl/libioipsl.a temp/
805	fi
806	cd temp
807	if [[ "${phys}" == "mars" ]]
808	then
809	ar x libbibio.a
810	ar x libphymars.a
811	ar x libaeronomars.a
812	elif [[ "${phys}" == "venus" ]]
813	then
814	ar x libphyvenus.a
815	ar x libmisc.a
816	ar x libphy_common.a
817	ar x libioipsl.a
818	elif [[ "${phys}" == "generic" ]]
819	then
820	ar x libphystd.a
821	ar x libmisc.a
822	ar x libphy_common.a
823	ar x libioipsl.a
824	elif [[ "${phys}" == "titan" ]]
825	then
826	ar x libchimtitan.a
827	ar x libphytitan.a
828	ar x libmisc.a
829	ar x libphy_common.a
830	ar x libioipsl.a
831	fi
832	\rm *.a
833	ar r liblmd.a *
834	cp -f liblmd.a ..
835	cd ..
836	\rm -r temp
837	nm liblmd.a > liblmd_content
838	# finish merge
839	cd ..
840	if [[ "${phys}" == "new" ]]
841	then
842	if [[ "${phys}" == "mars" ]]
843	then
844	# include modules for interfacing
845	mv *.mod ../inc/
846	else
847	# mv ./libo/linux/.mod ../inc/ # on /u/ and /planeto/
848	mv ./libo//.mod ../inc/ # on /u/ and /planeto/
849	#mv ./libo/CICLAD/.mod ../inc/ # on CICLAD
850	#mv ./libo/X64/.mod ../inc/ # on MESU and OCCIGEN
851	cp -f $pathioipsl/*.mod ../inc/
852	fi
853	fi
854
855
856	# save a copy
857	#--------------
858	cp -f libo/liblmd.a libo/liblmd.a_${lon}_${lat}_${level}_${dom}_${tra}
859	echo '****************************************'
860
861	# ok
862	#----
863	cd ..
864
865	# manage nest includes in module_lmd_driver.F
866	#----
867	cp call_meso_inifis$dom.inc call_meso_inifis.inc
868	cp call_meso_physiq$dom.inc call_meso_physiq.inc
869
870
871	fi
872	##################################################
873	# END compile physics
874	##################################################
875
876	#------------------
877	# compile WRF
878	#------------------
879	if [ ${justphys} -eq 0 ]
880	then
881
882	echo 2. compiling WRF dynamical core ...
883
884	#if [[ "${phys}" == "nophys_" ]]
885	#then
886	# echo 'NO LMD PHYSICS included'
887	#else
888	# if [[ ! ( -f "call_meso_physiq.inc" ) ]]
889	# then
890	# echo 'did you compile the physics ? no call_meso_physiq.inc !'
891	# exit
892	# fi
893	#fi
894
895	# be sure to compile with the most recent physics
896	touch phys/module_lmd_driver.F
897
898	# talk to user
899	echo '>>> compiling ... this may be long ... <<<'
900	echo check progress in:
901	echo $PWD/log_compile
902	echo check possible errors in:
903	echo $PWD/log_error
904
905	# compile ...
906	echo '>>> YOUR CONFIG IS : '${config}
907	case ${config} in
908	'real') ./compile em_real > log_compile 2> log_error
909	# save executables
910	cd main
911	if [[ -f real.exe ]]
912	then
913	echo 'Looks good ! real.exe is here...'
914	fi
915	if [[ -f wrf.exe ]]
916	then
917	echo 'Looks good ! wrf.exe is here...'
918	fi
919	cp -f real.exe ../../real_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
920	cp -f wrf.exe ../../wrf_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
921	cd .. ;;
922	'ideal') #mkdir 'test/em_quarter_ss' 2> /dev/null
923	#echo '>>> YOUR CONFIG IS : '${config}
924	./compile em_quarter_ss > log_compile 2> log_error
925	# save executables
926	cd main
927	if [[ -f ideal.exe ]]
928	then
929	echo 'Looks good ! ideal.exe is here...'
930	fi
931	if [[ -f wrf.exe ]]
932	then
933	echo 'Looks good ! wrf.exe is here...'
934	fi
935	cp -f ideal.exe ../../ideal_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
936	cp -f wrf.exe ../../wrf_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
937	cd .. ;;
938	'les') #echo '>>> YOUR CONFIG IS : '${config}
939	mkdir 'test/em_les' 2> /dev/null
940	./compile em_les ###> log_compile 2> log_error
941	# save executables
942	cd main
943	if [[ -f ideal.exe ]]
944	then
945	echo 'Looks good ! ideal.exe is here...'
946	fi
947	if [[ -f wrf.exe ]]
948	then
949	echo 'Looks good ! wrf.exe is here...'
950	fi
951	cp -f ideal.exe ../../ideal_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
952	cp -f wrf.exe ../../wrf_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
953	cd .. ;;
954	*) echo not supported... please use ; echo ideal les ; exit ;;
955	esac
956	echo '*****last lines from log_error*******'
957	tail -n 20 log_error
958	fi
959
960	# the end
961	echo '****************************************'
962	echo 'done.'
963	echo '****************************************'
964	cp last ../makemeso_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}
965	mv last ../../
966	svn info ../../ > ../makemeso_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.svn.info
967
968	# link latest compiled folder as LATEST
969	cd ../../
970	rm -rf LATEST
971	ln -sf ${conf_wrf} LATEST
972
973	# link latest compiled exec
974	cd LATEST
975	case ${config} in
976	'real') ln -sf real_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe real.exe ;;
977	'ideal') ln -sf ideal_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe ideal.exe ;;
978	'les') ln -sf ideal_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe ideal.exe ;;
979	esac
980	ln -sf wrf_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe wrf.exe
981	cd ..
982
983	# add here specific messages
984	if [[ "${dom}" != "1" ]]
985	then
986	nest=$(expr ${lon} + 4)
987	echo NB: in namelist.input, please set:
988	echo '
989	max_dom = '$dom'
990	s_we = 1,1,
991	e_we = '$lon','$nest',
992	s_sn = 1,1,
993	e_sn = '$lat','$nest',
994	s_vert = 1,1,
995	e_vert = '$level','$level','
996	fi
997
998

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