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makemeso @ 135

Last change on this file since 135 was 118, checked in by aslmd, 14 years ago
LMD_MM_MARS: ajout mars_lmd_new_storm avec routines modifiees par J. Faure (stage M2). modification makemeso et runmeso avec ajout d une option -s qui permet de preciser un scenario base sur une physique legerement differente comme par exemple storm. ceci cree un nouveau dossier de compilation dont le nom commence par le nom du scenario.
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File size: 24.4 KB

Line
1	#! /bin/bash
2
3
4	##################################
5	# makemeso allows you to compile #
6	# WRF with modified LMD physics #
7	##################################
8
9	##############################
10	# Author: A. Spiga #
11	# New version : October 2008 #
12	# Last update : January 2009 #
13	# November 09 #
14	# January 11 #
15	##############################
16
17	###############################
18	#### Type makemeso -h for help
19	###############################
20
21
22
23	##############################################################################################
24	##############################################################################################
25	##############################################################################################
26	##############################################################################################
27
28	donotcompile=0
29	donotallow=0
30	config='real'
31	donotcompilephys=0
32	justphys=0
33	debug=0
34	fresh_start=0
35	phys=""
36	scenario=""
37	while getopts "drc:njhgpfs:" options; do
38	case $options in
39	d ) donotcompile=1;; ## just to check the compile folder
40	r ) donotallow=1;; ## allow only known config (useful with 'makemeso < last')
41	c ) config="${OPTARG}";; ## idealized cases
42	n ) donotcompilephys=1;; ## do not recompile physics
43	j ) justphys=1;; ## just compile LMD physics
44	g ) debug=1;; ## debug mode
45	p ) phys="newphys_";; ## with new physics
46	f ) fresh_start=1;; ## a fresh start
47	s ) scenario="${OPTARG}";; ## a specific scenario, you need a corresponding "mars_lmd_..."
48	h ) echo "
49	# Use:
50	#
51	# makemeso ## basic use (real configuration)
52	#
53	# makemeso -d ## no compilation, just check the name of the compile folder
54	#
55	# makemeso -c real ## real-case mode [default]
56	# makemeso -c ideal ## idealized mode (convective cell, mountain wave, etc...)
57	#
58	# makemeso -n ## do not recompile LMD physics (must have been compiled before)
59	#
60	# makemeso < last ## basic use + skip questions [! script must have been executed at least once]
61	# makemeso -r < last ## basic use + skip questions + only known config
62	# makemeso -nr < last ## basic use + skip questions + only known config + no LMD phys recompile
63	#
64	# makemeso -j ## just compile the LMD physics
65	#
66	# makemeso -g ## debug mode
67	#
68	# makemeso -h ## display options
69	#
70	# makemeso -p ## with new LMD physics
71	#
72	# makemeso -f ## fresh start [clean -a]
73	#
74	# makemeso -s storm ## a specific scenario, you need a corresponding mars_lmd_... (only for newphys)
75	" ; exit ;;
76	esac
77	done
78
79	#--------------
80	# talk w/ user
81	#--------------
82	echo '****************************************'
83	echo ' LMD Mesoscale Model Compiler. Welcome.'
84	echo '****************************************'
85	if [[ "${phys}" == "newphys_" ]]
86	then
87	echo '*********with new physics***********'
88	echo '****************************************'
89	fi
90	# computer
91	uname -a \| grep x86_64 > /dev/null
92	if [[ "$?" == 0 ]]
93	then
94	machine='64'
95	else
96	machine='32'
97	fi
98	# compiler
99	echo "Supported compiler options are "
100	echo " <1> pgf90"
101	echo " <2> g95"
102	echo " <3> pgf90 + mpi"
103	echo " <4> ifort"
104	echo " <5> ifort + mpi"
105	echo " <7> xlf + mpi (IBM AIX)"
106	echo "Your choice ?" ; read reply
107	case ${reply} in
108	1) compilo='pgf' ; numproc=1 ;;
109	2) compilo='g95' ; numproc=1 ;;
110	3) compilo='mpi'
111	if [[ "${WHERE_MPI}" = "" ]]
112	then
113	echo Please initialize the variable WHERE_MPI in your environnement
114	exit
115	fi
116	echo How many processors ? e.g. 1, 2, 4, 6, 8, 12, 16, 20, 24, 32, 64, 128 ; read numproc ;;
117	4) compilo='ifort' ; numproc=1 ;;
118	5) compilo='mpifort' ; echo How many processors ? e.g. 1, 2, 4, 6, 8, 12, 16, 20, 24, 32, 64, 128 ; read numproc ;;
119	7) compilo='mpixlf' ; echo How many processors ? e.g. 1, 2, 4, 6, 8, 12, 16, 20, 24, 32, 64, 128 ; read numproc ;;
120	### for tests
121	99) compilo='gnu' ; numproc=1 ;;
122	*) echo not supported by this script ; exit ;;
123	esac
124	# dimensions
125	if [ ${donotcompile} -eq 0 ]
126	then
127	echo Grid points in longitude ? ; read lon
128	echo Grid points in latitude ? ; read lat
129	echo Number of vertical levels ? ; read level
130	fi
131	echo Number of domains ? ; read dom
132
133	###PB lecture dom si < last
134
135	case ${dom} in
136	1) single='_single' ;;
137	*) single='_nest' ;;
138	esac
139	if [ "${compilo}" = "mpi" -o "${compilo}" = "mpifort" -o "${compilo}" = "mpixlf" ]
140	then
141	single=''
142	fi
143
144	testflag=''
145	####
146	#testflag='_test'
147	####
148
149	conf_wrf="${scenario}${phys}${compilo}_${machine}${single}${testflag}"
150	\rm what_folder 2> /dev/null
151	echo ${conf_wrf} > what_folder
152	if [ ${donotcompile} -eq 1 ]
153	then
154	#\rm what_folder 2> /dev/null
155	#echo '**********************'
156	#echo '*** Your folder is ...'
157	#echo '**********************'
158	#echo ${conf_wrf} \| tee what_folder
159	#cat what_folder
160	#echo ${conf_wrf} > what_folder
161	#echo ${reply} > what_compilo
162	#echo ${numproc} > what_numproc
163	exit
164	fi
165	echo Number of tracers ? ; read tra
166	if [ ${tra} -eq 0 ]
167	then
168	tra=1
169	fi
170	# folder
171	mkdir ${conf_wrf} 2> /dev/null
172	if [[ "$?" == 0 ]]
173	then
174	echo new folder ... link sources
175	if [[ "${phys}" == "newphys_" ]]
176	then
177	\rm copy_model_tmp > /dev/null
178	if [[ "${scenario}" == "" ]]
179	then
180	sed s+"mars_lmd"+"mars_lmd_new"+g copy_model > copy_model_tmp
181	else
182	echo SCENARIO ${scenario} DID YOU INCLUDE THE RIGHT copy_model ? ; read dummy
183	sed s+"mars_lmd"+"mars_lmd_new_${scenario}"+g copy_model > copy_model_tmp
184	fi
185	chmod 755 copy_model_tmp
186	./copy_model_tmp
187	\rm copy_model_tmp
188	mv WRFV2 ${conf_wrf}/
189	cd ${conf_wrf}/WRFV2
190	if [[ "${scenario}" == "" ]]
191	then
192	ln -sf mars_lmd_new mars_lmd
193	else
194	ln -sf mars_lmd_new_${scenario} mars_lmd
195	cp ../../SRC/WRFV2/mars_lmd_new_${scenario}/Registry.EM mars_lmd_new_${scenario}/
196	cp ../../SRC/WRFV2/mars_lmd_new_${scenario}/*.inc mars_lmd_new_${scenario}/
197	cd Registry ; ln -sf ../mars_lmd_new_${scenario}/Registry.EM . ; cd ..
198	fi
199	ln -sf meso_callkeys_newphys.h meso_callkeys.h
200	cd Registry ; Registry.bash ; cd ..
201	else
202	./copy_model
203	mv WRFV2 ${conf_wrf}/
204	cd ${conf_wrf}/WRFV2
205	cd Registry ; Registry.bash ; cd ..
206	fi
207	else
208	cd ${conf_wrf}/WRFV2
209	if [ ${fresh_start} -eq 1 ]
210	then
211	echo '*** FRESH START, I clean everything'
212	clean -a > /dev/null 2> /dev/null
213	cd Registry ; mv Registry Registry.bak ; Registry.bash ; cd ..
214	answer='y' ## a voir... pas si sur
215	else
216	echo Did you modify anything in the Registry or clean ? y for yes, any key for no ; read answer
217	case ${answer} in
218	y) cd Registry ; mv Registry Registry.bak ; Registry.bash ; cd .. ;;
219	*) answer='no' ;;
220	esac
221	fi
222	fi
223	# summary
224	echo '**********************'
225	echo '*** Your folder is ...'
226	echo '**********************'
227	echo ${conf_wrf}
228	echo '**********************'
229	echo '****************************************'
230	echo so ...
231	echo your computer is ${machine} bits
232	echo ${compilo} is your compiler
233	if [[ "${compilo}" = "mpi" ]]
234	then
235	echo MPICH is in ${WHERE_MPI}
236	fi
237	echo you will use ${numproc} processors
238	echo you have ${lon} x points
239	echo ' '${lat} y points
240	echo ' '${level} z points
241	echo ' '${dom} domains
242	echo ' '${tra} tracers
243	echo '****************************************'
244	# save answer
245	\rm last 2> /dev/null
246	touch last
247	echo ${reply} >> last
248	if [ "${compilo}" = "mpi" -o "${compilo}" = "mpifort" -o "${compilo}" = "mpixlf" ]
249	then
250	echo ${numproc} >> last
251	fi
252	echo ${lon} >> last
253	echo ${lat} >> last
254	echo ${level} >> last
255	echo ${dom} >> last
256	echo ${tra} >> last
257	echo ${answer} >> last
258
259
260	#------------
261	# log files
262	#------------
263	\rm log_compile 2> /dev/null
264	\rm log_error 2> /dev/null
265
266	#-----------------
267	# configure WRF
268	#-----------------
269	mv configure.wrf configure.wrf.bak 2> /dev/null
270	########################
271	conf_wrf_forall="${compilo}_${machine}${single}${testflag}"
272	case ${conf_wrf_forall} in
273	#######TEST TEST
274	# GFORTRAN, 64 bits, no nesting
275	gnu_64_single) cd arch ; ln -sf ../configure.defaults.gfortran64 configure.defaults ; cd ..
276	echo 15 \| configure > log_compile 2> log_error
277	sed -f mars.sed configure.wrf > yeah ; mv -f yeah configure.wrf
278	sed s+"-L../mars_lmd/libo -llmd"+"-L../mars_lmd/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf ;;
279	#######TEST TEST
280	# PGF90, 32 bits, no nesting
281	pgf_32_single) echo 1 \| configure > log_compile 2> log_error
282	sed -f mars.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
283	# PGF90, 32 bits, nesting
284	pgf_32_nest) echo 2 \| configure > log_compile 2> log_error
285	sed -f mars.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
286	# PGF90, 64 bits, no nesting
287	pgf_64_single) echo 1 \| configure > log_compile 2> log_error
288	sed -f mars.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
289	# PGF90, 64 bits, nesting
290	pgf_64_nest) cd arch ; ln -sf ../configure.defaults.fix64nest configure.defaults ; cd ..
291	echo 4 \| configure > log_compile 2> log_error
292	sed -f mars.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
293	# G95, 32 bits, no nesting
294	g95_32_single) echo 13 \| configure > log_compile 2> log_error
295	sed -f mars.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
296	# G95, 64 bits, no nesting ### we modify configure.defaults to add x86_64 next to g95 in the header comment
297	g95_64_single) cd arch ; sed s/"PC Linux i486 i586 i686, g95 compiler"/"PC Linux i486 i586 i686 x86_64, g95 compiler"/g configure.defaults > yeahyeahyeah ; rm configure.defaults ; mv yeahyeahyeah configure.defaults ; cd ..
298	echo 14 \| configure > log_compile 2> log_error
299	sed -f mars.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
300	#sed s+"= g95"+"= /home/physastro/aspiga/mysoft/g95/g95-install/bin/x86_64-unknown-linux-gnu-g95"+g configure.wrf > yeah ; mv -f yeah configure.wrf;;
301	# IFORT, 64 bits, no nesting
302	ifort_64_single) echo 5 \| configure > log_compile 2> log_error
303	sed s+"-DIFORT_KLUDGE"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
304	## !!! NETCDF must be defined
305	sed s+"lio_grib_share"+"lio_grib_share -L../mars_lmd/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah
306	mv -f yeah configure.wrf ;;
307	mpifort_64) # MPI+IFORT, 64 bits, no nesting / nesting
308	echo 9 \| configure > log_compile 2> log_error
309	sed -f mars.sed configure.wrf > yeah ; mv -f yeah configure.wrf
310	sed s+"-f90=ifort"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
311	sed s+"-cc=icc"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
312	sed s+"-DIFORT_KLUDGE"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
313	sed s+"O3"+"O2"+g configure.wrf > yeah ; mv -f yeah configure.wrf
314	#sed s+"O3"+"O0"+g configure.wrf > yeah ; mv -f yeah configure.wrf ### pour compilation rapide
315	#-w -ftz -align all -fno-alias -fp-model precise >>> options indiquees dans WRF3
316	#http://software.intel.com/en-us/articles/performance-tools-for-software-developers-building-wrf-with-the-intel-compilers/
317	#### NB: RSL is replaced by RSL_LITE, better memory capacity, less seg fault
318	sed s+"../external/RSL/RSL"+"../external/RSL_LITE"+g configure.wrf > yeah ; mv -f yeah configure.wrf
319	sed s+"-DWRF_RSL_IO"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
320	sed s+"-DRSL"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
321	sed s+"librsl.a"+"librsl_lite.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
322	sed s+"../external/RSL/gen"+"../external/RSL_LITE/gen"+g configure.wrf > yeah ; mv -f yeah configure.wrf
323	sed s+"../external/RSL/module"+"../external/RSL_LITE/module"+g configure.wrf > yeah ; mv -f yeah configure.wrf
324	sed s+"-lrsl"+"-lrsl_lite"+g configure.wrf > yeah ; mv -f yeah configure.wrf
325	sed s+"linux"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
326	### necessary even if mpi-selector is used (no need in makegcm though)
327	sed s+"mpif90"+"${WHERE_MPI}/mpif90"+g configure.wrf \| sed s+"mpicc"+"${WHERE_MPI}/mpicc"+g > yeah ; mv -f yeah configure.wrf
328	sed s+"mpicc"+"mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
329	## !!! NETCDF must be defined
330	sed s+"-L../mars_lmd/libo -llmd"+"-L../mars_lmd/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah
331	mv -f yeah configure.wrf
332	#### POUR LE TRAITEMENT PARTICULIERS des NESTS sur iDATAPLEX [cf. module_lmd_driver]
333	sed s+"ARCHFLAGS = "+"ARCHFLAGS = -DSPECIAL_NEST_SAVE "+g configure.wrf > yeah
334	mv -f yeah configure.wrf ;;
335	# MPICH, 64 bits, no nesting / nesting
336	mpi_64) cd arch ; ln -sf ../configure.defaults.fix64nest configure.defaults ; cd ..
337	echo 3 \| configure > log_compile 2> log_error
338	sed -f mars.sed configure.wrf > yeah ; mv -f yeah configure.wrf
339	sed s+"mpif90"+"${WHERE_MPI}/mpif90"+g configure.wrf \| sed s+"mpicc"+"${WHERE_MPI}/mpicc"+g \| sed s+"mpicc"+"mpicc -DMPI2_SUPPORT"+g > yeah
340	#\| sed s+"fastsse"+"fast"+g > yeah
341	mv -f yeah configure.wrf ;;
342	#sed s+"-fastsse"+"-O2 -Munroll -Mcache_align"+g configure.wrf > yeah
343	##sed s+"-fastsse"+"-O2 -fpic"+g configure.wrf > yeah ## marche pas, ILM problem
344	##sed s+"-fastsse"+"-mcmodel=medium -Mlarge_arrays"+g configure.wrf > yeah ## marche pas, ILM problem
345	#mv -f yeah configure.wrf ;;
346	# MPICH, 64 bits, OK with periodic BC but no positive definite
347	mpi_64_test) cd arch ; ln -sf ../configure.defaults.fix64nest configure.defaults ; cd ..
348	echo 2 \| configure > log_compile 2> log_error
349	sed -f mars.sed configure.wrf > yeah ; mv -f yeah configure.wrf
350	sed s+"mpif90"+"${WHERE_MPI}/mpif90"+g configure.wrf \| sed s+"mpicc"+"${WHERE_MPI}/mpicc"+g \| sed s+"mpicc"+"mpicc -DMPI2_SUPPORT"+g > yeah
351	mv -f yeah configure.wrf ;;
352	# XLF+MPICH on AIX machine (64 bits) with nesting, NB: the 32bits notice is not to be considered
353	mpixlf_32) cd arch ; ln -sf ../configure.defaults.fix64nest configure.defaults ; cd ..
354	echo 3 \| configure > log_compile 2> log_error
355	sed -f mars.sed configure.wrf > yeah
356	mv -f yeah configure.wrf ;;
357	# ANYTHING ELSE
358	*) echo NO PRESETS ...
359	if [ ${donotallow} -eq 0 ]
360	then
361	configure
362	else
363	# problem when an input file is used
364	echo 'please cd to '$PWD' and type ./configure'
365	exit
366	fi ;;
367	esac
368	########################
369
370	if [[ "${phys}" == "newphys_" ]]
371	then
372	sed s+"ARCHFLAGS = "+"ARCHFLAGS = -DNEWPHYS "+g configure.wrf > yeah
373	mv -f yeah configure.wrf
374	fi
375
376	if [[ ! ("${scenario}" == "") ]]
377	then
378	sed s+"ARCHFLAGS = "+"ARCHFLAGS = -D${scenario} "+g configure.wrf > yeah
379	mv -f yeah configure.wrf
380	fi
381
382	if [ ${debug} -ne 0 ] # not working for xlf!
383	then
384	echo 'DEBUG DEBUG DEBUG DEBUG'
385	sed s+"#-g"+"-g"+g configure.wrf > yeah
386	mv -f yeah configure.wrf
387	fi
388
389
390	##################################################
391	# compile physics
392	##################################################
393	if [ ${donotcompilephys} -eq 0 ]
394	then
395
396	cd mars_lmd/
397
398	# required size
399	#----------------
400	case ${numproc} in
401	1) physx=$(expr ${lon} - 1)
402	physy=$(expr ${lat} - 1)
403	physz=$(expr ${level} - 1) ;;
404	2) physx=$(expr ${lon} - 1)
405	physy=$(expr ${lat} - 1) ; physy=$(expr ${physy} \/ 2)
406	physz=$(expr ${level} - 1) ;;
407	4) physx=$(expr ${lon} - 1) ; physx=$(expr ${physx} \/ 2)
408	physy=$(expr ${lat} - 1) ; physy=$(expr ${physy} \/ 2)
409	physz=$(expr ${level} - 1) ;;
410	6) physx=$(expr ${lon} - 1) ; physx=$(expr ${physx} \/ 2)
411	physy=$(expr ${lat} - 1) ; physy=$(expr ${physy} \/ 3)
412	physz=$(expr ${level} - 1) ;;
413	8) physx=$(expr ${lon} - 1) ; physx=$(expr ${physx} \/ 2)
414	physy=$(expr ${lat} - 1) ; physy=$(expr ${physy} \/ 4)
415	physz=$(expr ${level} - 1) ;;
416	12) physx=$(expr ${lon} - 1) ; physx=$(expr ${physx} \/ 3)
417	physy=$(expr ${lat} - 1) ; physy=$(expr ${physy} \/ 4)
418	physz=$(expr ${level} - 1) ;;
419	16) physx=$(expr ${lon} - 1) ; physx=$(expr ${physx} \/ 4)
420	physy=$(expr ${lat} - 1) ; physy=$(expr ${physy} \/ 4)
421	physz=$(expr ${level} - 1) ;;
422	20) physx=$(expr ${lon} - 1) ; physx=$(expr ${physx} \/ 4)
423	physy=$(expr ${lat} - 1) ; physy=$(expr ${physy} \/ 5)
424	physz=$(expr ${level} - 1) ;;
425	24) physx=$(expr ${lon} - 1) ; physx=$(expr ${physx} \/ 4)
426	physy=$(expr ${lat} - 1) ; physy=$(expr ${physy} \/ 6)
427	physz=$(expr ${level} - 1) ;;
428	32) physx=$(expr ${lon} - 1) ; physx=$(expr ${physx} \/ 4)
429	physy=$(expr ${lat} - 1) ; physy=$(expr ${physy} \/ 8)
430	physz=$(expr ${level} - 1) ;;
431	64) physx=$(expr ${lon} - 1) ; physx=$(expr ${physx} \/ 8)
432	physy=$(expr ${lat} - 1) ; physy=$(expr ${physy} \/ 8)
433	physz=$(expr ${level} - 1) ;;
434	128) physx=$(expr ${lon} - 1) ; physx=$(expr ${physx} \/ 8)
435	physy=$(expr ${lat} - 1) ; physy=$(expr ${physy} \/ 16)
436	physz=$(expr ${level} - 1) ;;
437	*) echo not supported ; exit
438	esac
439
440	# change this if you change num_soil_layers in WRF
441	# -- default is 10
442	if [[ "${phys}" == "newphys_" ]]
443	then
444	soilsize=18 ## nouvelle physique
445	else
446	soilsize=10
447	fi
448
449	# GCM environment variables
450	#--------------------------
451	export LMDGCM=$PWD
452	export LIBOGCM=$PWD/libo
453
454	# generate the appropriate dimphys
455	#---------------------------------
456	cd libf/phymars
457	\rm dimphys.h 2> /dev/null
458	physize=$(expr ${physx} \* ${physy})
459	sed s/--xsize--/${physx}/g meso_dimphys.h_ref \| sed s/--ysize--/${physy}/g \| sed s/--physize--/${physize}/g \| sed s/--zsize--/${physz}/g \| sed s/--soilsize--/${soilsize}/g > dimphys.h
460	head -15 dimphys.h
461	###
462	### TEST new new phys
463	if [[ "${phys}" == "newphys_" ]]
464	then
465	touch callkeys.h.meso
466	ln -sf meso_callkeys.h callkeys.h
467	#touch dustlift.F.meso
468	# ln -sf meso_dustlift.F dustlift.F ## attention avec "ancienne nouvelle physique"
469	touch readtesassim.F90.meso
470	ln -sf meso_readtesassim.F90 readtesassim.F90 ## attention idem
471	touch gr_fi_dyn.F.lien
472	ln -sf ../dyn3d/gr_fi_dyn.F . ## dommage, a corriger ## attention idem
473	fi
474	###
475	###
476	cd ../..
477
478	# prepare for nesting
479	#---------------------
480	cd libf
481	duplicate${dom} 2> /dev/null
482	cd ..
483
484	# compile physics
485	#--------------------------
486	\rm libf/grid/dimensions.h 2> /dev/null
487	\rm -rf libo/* 2> /dev/null
488	echo 1. compiling LMD physics ...
489	echo compilation info in:
490	echo $PWD/libo/log_compile_phys
491
492	if [ ${debug} -ne 0 ]
493	then
494	echo 'DEBUG DEBUG DEBUG DEBUG'
495	nohup makegcm_${compilo} -debug -t ${tra} -p mars -d ${physz} testphys1d \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
496	else
497	nohup makegcm_${compilo} -t ${tra} -p mars -d ${physz} testphys1d \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
498	fi
499	echo ... done
500	# clean the duplicate routines
501	cd libf
502	duplicate1 2> /dev/null
503	cd ..
504
505	# merge LMD executables in one lib
506	#--------------------------------------
507	cd libo
508	mkdir temp
509	#cp -f LINUXfastI._${physz}_t${tra}_reg/*.a temp
510	cp -f LINUX/.a temp
511	cd temp
512	ar x libbibio.a
513	ar x libphymars.a
514	ar x libaeronomars.a
515	\rm *.a
516	ar r liblmd.a *
517	cp -f liblmd.a ..
518	cd ..
519	\rm -r temp
520	nm liblmd.a > liblmd_content
521	# finish merge
522	cd ..
523
524	# save a copy
525	#--------------
526	cp -f libo/liblmd.a libo/liblmd.a_${lon}_${lat}_${level}_${dom}_${tra}
527	echo '****************************************'
528
529	# ok
530	#----
531	cd ..
532
533	# manage nest includes in module_lmd_driver.F
534	#----
535	cp call_meso_inifis$dom.inc call_meso_inifis.inc
536	cp call_meso_physiq$dom.inc call_meso_physiq.inc
537
538
539	fi
540	##################################################
541	# END compile physics
542	##################################################
543
544	#------------------
545	# compile WRF
546	#------------------
547	if [ ${justphys} -eq 0 ]
548	then
549
550	echo 2. compiling WRF dynamical core ...
551
552	if [[ ! ( -f "call_meso_physiq.inc" ) ]]
553	then
554	echo 'did you compile the physics ? no call_meso_physiq.inc !'
555	exit
556	fi
557
558	# be sure to compile with the most recent physics
559	touch phys/module_lmd_driver.F
560
561	# talk to user
562	echo '>>> YOUR CONFIG IS : '${config}
563	echo '>>> compiling ... this may be long ... <<<'
564	echo check progress in:
565	echo $PWD/log_compile
566	echo check possible errors in:
567	echo $PWD/log_error
568
569	# compile ...
570	case ${config} in
571	'real') compile em_real > log_compile 2> log_error
572	# save executables
573	cd main
574	if [[ -f real.exe ]]
575	then
576	echo 'Looks good ! real.exe is here...'
577	fi
578	if [[ -f wrf.exe ]]
579	then
580	echo 'Looks good ! wrf.exe is here...'
581	fi
582	cp -f real.exe ../../real_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
583	cp -f wrf.exe ../../wrf_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
584	cd .. ;;
585	'ideal') #mkdir 'test/em_quarter_ss' 2> /dev/null
586	compile em_quarter_ss > log_compile 2> log_error
587	# save executables
588	cd main
589	if [[ -f ideal.exe ]]
590	then
591	echo 'Looks good ! ideal.exe is here...'
592	fi
593	if [[ -f wrf.exe ]]
594	then
595	echo 'Looks good ! wrf.exe is here...'
596	fi
597	cp -f ideal.exe ../../ideal_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
598	cp -f wrf.exe ../../wrf_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
599	cd .. ;;
600	*) echo not supported... please use ; echo real ideal ; exit ;;
601	esac
602	echo '*****last lines from log_error*******'
603	tail -n 20 log_error
604	fi
605
606	# the end
607	echo '****************************************'
608	echo 'done.'
609	echo '****************************************'
610	cp last ../makemeso_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}
611	mv last ../../
612
613	# add here specific messages
614	if [[ "${dom}" != "1" ]]
615	then
616	nest=$(expr ${lon} + 4)
617	echo NB: in namelist.input, please set:
618	echo '
619	max_dom = '$dom'
620	s_we = 1,1,
621	e_we = '$lon','$nest',
622	s_sn = 1,1,
623	e_sn = '$lat','$nest',
624	s_vert = 1,1,
625	e_vert = '$level','$level','
626	fi
627

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