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makemeso @ 2276

Last change on this file since 2276 was 2268, checked in by aslmd, 5 years ago
MESOSCALE. option -d of makemeso was incomplete. now working to simply create the compilation folder without compiling anything
Property svn:executable set to ``*
File size: 41.1 KB

Rev	Line
[11]	1	#! /bin/bash
	2
	3
	4	##################################
	5	# makemeso allows you to compile #
	6	# WRF with modified LMD physics #
	7	##################################
	8
	9	##############################
	10	# Author: A. Spiga #
	11	# New version : October 2008 #
	12	# Last update : January 2009 #
	13	# November 09 #
[29]	14	# January 11 #
[11]	15	##############################
	16
[68]	17	###############################
	18	#### Type makemeso -h for help
	19	###############################
[11]	20
[2058]	21	###path to compiled version of ioipsl on your system for generic physics
	22	pathioipsl='/home/leconte/script/ioipsl/modipsl/lib'
[11]	23
	24	##############################################################################################
	25	##############################################################################################
	26	##############################################################################################
	27	##############################################################################################
	28
	29	donotcompile=0
	30	donotallow=0
[1588]	31	config='real'
[11]	32	donotcompilephys=0
	33	justphys=0
	34	debug=0
[54]	35	fresh_start=0
[1588]	36	phys="mars_lmd"
[118]	37	scenario=""
[1038]	38	from_scratch=0
[1440]	39
[1588]	40	while getopts "drc:njhgp:fs:xe" options; do
[11]	41	case $options in
[2268]	42	d ) donotcompile=1;donotcompilephys=1;justphys=1;; ## just to check the compile folder
[118]	43	r ) donotallow=1;; ## allow only known config (useful with 'makemeso < last')
	44	c ) config="${OPTARG}";; ## idealized cases
	45	n ) donotcompilephys=1;; ## do not recompile physics
	46	j ) justphys=1;; ## just compile LMD physics
	47	g ) debug=1;; ## debug mode
[1588]	48	p ) phys="${OPTARG}";; ## choose physics
[118]	49	f ) fresh_start=1;; ## a fresh start
[1038]	50	e ) from_scratch=1;; ## a fresh start with a completely new folder
[1411]	51	s ) scenario="${OPTARG}";; ## a specific scenario (with precompiling flags)
[1590]	52	x ) donotcompile=1;phys="void_lmd_new";donotcompilephys=1;; ## a case with no LMD physics included
[11]	53	h ) echo "
	54	# Use:
	55	#
[142]	56	# makemeso ## basic use (real-case configuration)
[11]	57	#
	58	# makemeso -d ## no compilation, just check the name of the compile folder
	59	#
[68]	60	# makemeso -c ideal ## idealized mode (convective cell, mountain wave, etc...)
[142]	61	# makemeso -c les ## large-eddy simulations mode based on WRFV3
[11]	62	#
[70]	63	# makemeso -n ## do not recompile LMD physics (must have been compiled before)
[68]	64	#
[11]	65	# makemeso < last ## basic use + skip questions [! script must have been executed at least once]
	66	# makemeso -r < last ## basic use + skip questions + only known config
	67	# makemeso -nr < last ## basic use + skip questions + only known config + no LMD phys recompile
	68	#
	69	# makemeso -j ## just compile the LMD physics
	70	#
	71	# makemeso -g ## debug mode
	72	#
	73	# makemeso -h ## display options
[29]	74	#
[1588]	75	# makemeso -p mars_lmd_new ## choose physics
[1597]	76	# venus_lmd_new
[2014]	77	# generic_lmd_new
[54]	78	#
	79	# makemeso -f ## fresh start [clean -a]
[118]	80	#
[1578]	81	# makemeso -e ## a completely new recompile with erasing the WHOLE compiling folder
[1038]	82	#
[1411]	83	# makemeso -s DUSTSTORM ## a specific scenario (with precompiling flags)
[156]	84	#
	85	# makemeso -x ## a case with no LMD physics included
[11]	86	" ; exit ;;
	87	esac
	88	done
	89
	90	#--------------
	91	# talk w/ user
	92	#--------------
	93	echo '****************************************'
	94	echo ' LMD Mesoscale Model Compiler. Welcome.'
	95	echo '****************************************'
[1588]	96	if [[ "${phys}" == "new" ]]
[29]	97	then
[1588]	98	echo '*********** PHYSICS: ' ${phys}
[29]	99	echo '****************************************'
	100	fi
[11]	101	# computer
	102	uname -a \| grep x86_64 > /dev/null
	103	if [[ "$?" == 0 ]]
	104	then
	105	machine='64'
	106	else
	107	machine='32'
	108	fi
	109	# compiler
	110	echo "Supported compiler options are "
	111	echo " <1> pgf90"
	112	echo " <2> g95"
	113	echo " <3> pgf90 + mpi"
	114	echo " <4> ifort"
	115	echo " <5> ifort + mpi"
	116	echo " <7> xlf + mpi (IBM AIX)"
[1853]	117	echo " <8> gfortran"
[2115]	118	echo " <9> gfortran + openmpi"
[11]	119	echo "Your choice ?" ; read reply
	120	case ${reply} in
	121	1) compilo='pgf' ; numproc=1 ;;
	122	2) compilo='g95' ; numproc=1 ;;
	123	3) compilo='mpi'
[1236]	124	if [[ "${WHERE_MPI}" = "" ]]
[11]	125	then
	126	echo Please initialize the variable WHERE_MPI in your environnement
	127	exit
[1236]	128	fi ;;
[11]	129	4) compilo='ifort' ; numproc=1 ;;
[1236]	130	5) compilo='mpifort' ;;
	131	7) compilo='mpixlf' ;;
[1853]	132	8) compilo='gnu' ; numproc=1 ;;
[2115]	133	9) compilo='openmpi';;
[11]	134	*) echo not supported by this script ; exit ;;
	135	esac
[1236]	136	# number of processors
[1597]	137	if [[ "${phys}" == "new" ]]
[1236]	138	then
	139	numproc=999
	140	else
	141	case ${reply} in
	142	3) echo How many processors ? e.g. 1, 2, 4, 6, 8, 12, 16, 20, 24, 32, 64, 128 ; read numproc ;;
	143	5) echo How many processors ? e.g. 1, 2, 4, 6, 8, 12, 16, 20, 24, 32, 64, 128 ; read numproc ;;
	144	7) echo How many processors ? e.g. 1, 2, 4, 6, 8, 12, 16, 20, 24, 32, 64, 128 ; read numproc ;;
	145	esac
	146	fi
	147
[11]	148	# dimensions
	149	if [ ${donotcompile} -eq 0 ]
	150	then
[1212]	151	# ngrid: now dynamically set in newphys 03/2014
[1597]	152	if [[ "${phys}" == "new" ]]
[1212]	153	then
	154	lon=999
	155	lat=999
[1272]	156	level=999
[1236]	157	else
	158	echo Grid points in longitude ? ; read lon
	159	echo Grid points in latitude ? ; read lat
[1272]	160	echo Number of vertical levels ? ; read level
[1212]	161	fi
[11]	162	fi
	163	echo Number of domains ? ; read dom
	164
	165	###PB lecture dom si < last
	166
	167	case ${dom} in
	168	1) single='_single' ;;
	169	*) single='_nest' ;;
	170	esac
	171	if [ "${compilo}" = "mpi" -o "${compilo}" = "mpifort" -o "${compilo}" = "mpixlf" ]
	172	then
	173	single=''
	174	fi
	175
	176	testflag=''
	177	####
	178	#testflag='_test'
	179	####
	180
[1588]	181	conf_wrf="${phys}_${config}${scenario}_${compilo}_${machine}${single}${testflag}"
[1234]	182
	183	if [ ${debug} -eq 1 ]
	184	then
	185	conf_wrf="debug_${conf_wrf}"
	186	fi
	187
[11]	188	\rm what_folder 2> /dev/null
	189	echo ${conf_wrf} > what_folder
[1590]	190	if [ ${donotcompile} -eq 0 ]
[11]	191	then
[1590]	192	##\rm what_folder 2> /dev/null
	193	##echo '**********************'
	194	##echo '*** Your folder is ...'
	195	##echo '**********************'
	196	##echo ${conf_wrf} \| tee what_folder
	197	##cat what_folder
	198	##echo ${conf_wrf} > what_folder
	199	##echo ${reply} > what_compilo
	200	##echo ${numproc} > what_numproc
	201	#if [[ "${phys}" != "nophys_" ]]
	202	#then
	203	# exit
	204	#fi
	205	#else
[1212]	206	# tracers: now dynamically set in newphys 09/2013
[1597]	207	if [[ "${phys}" == "new" ]]
[1038]	208	then
	209	tra=999
	210	else
[1236]	211	echo Number of tracers ? ; read tra
[1038]	212	if [ ${tra} -eq 0 ]
	213	then
	214	tra=1
	215	fi
[157]	216	fi
[11]	217	fi
[1038]	218	# 'from scratch' case
	219	if [ ${from_scratch} -eq 1 ]
	220	then
	221	echo "***** I ERASE THE FOLDER "${conf_wrf}
	222	\rm -rf ${conf_wrf}
	223	fi
[11]	224	# folder
[1588]	225
[11]	226	mkdir ${conf_wrf} 2> /dev/null
	227	if [[ "$?" == 0 ]]
	228	then
	229	echo new folder ... link sources
[1588]	230	###############################################
[1597]	231	echo ${phys}
[1588]	232	./SRC/SCRIPTS/copy_model -p ${phys} -c ${config}
[215]	233	mv zeWRFV2 ${conf_wrf}/WRFV2
[1588]	234	###############################################
	235	if [[ "${phys}" == "new" ]]
[1411]	236	then
[1588]	237	cd ${conf_wrf}/WRFV2
[1411]	238	if [[ "${config}" != "les" ]]
[118]	239	then
[1411]	240	cp ../../SRC/WRFV2/Registry/Registry.EM.newphys Registry/Registry.EM
[118]	241	else
[1411]	242	cp -L ../../SRC/LES/WRFV2/Registry/Registry.EM.newphys Registry/Registry.EM
	243	fi
[1588]	244	cd phys
	245	ln -sf module_lmd_driver.F.new module_lmd_driver.F
	246	cd ..
[1212]	247
[1746]	248	else
	249	cd ${conf_wrf}/WRFV2
	250	cd Registry ; ./Registry.bash ; cd ..
[54]	251	fi
[142]	252	#### sparadrap consequent a l'utilisation de copy_model pour les liens
	253	#### -- car alors il manque fftpack
	254	if [[ "${config}" == "les" ]]
[158]	255	then
[1389]	256	cp ../../SRC/LES/correcfft ./
[142]	257	./correcfft
	258	\rm correcfft
	259	fi
[1588]	260	else
[11]	261	cd ${conf_wrf}/WRFV2
[54]	262	if [ ${fresh_start} -eq 1 ]
	263	then
	264	echo '*** FRESH START, I clean everything'
[318]	265	### clean the whole place
[54]	266	clean -a > /dev/null 2> /dev/null
[318]	267	### get a possibly modified registry !
[1588]	268	if [[ "${phys}" == "new" ]]
[333]	269	then
[1411]	270	cp ../../SRC/WRFV2/Registry/Registry.EM.newphys Registry/Registry.EM
	271	else
	272	cp ../../SRC/WRFV2/Registry/Registry.EM Registry/
[333]	273	fi
[341]	274	if [[ "${config}" == "les" ]]
	275	then
	276	cp ../../SRC/LES/WRFV2/Registry/Registry.EM Registry/
	277	fi
[318]	278	### ensure the model will be recompiled from scratch with correct registry
[54]	279	cd Registry ; mv Registry Registry.bak ; Registry.bash ; cd ..
[262]	280	# answer='y' ## a voir... pas si sur
	281	# else
	282	# if [[ "${phys}" != "nophys_" ]]
	283	# then
	284	# echo Did you modify anything in the Registry or clean ? y for yes, any key for no ; read answer
	285	# case ${answer} in
	286	# y) cd Registry ; mv Registry Registry.bak ; Registry.bash ; cd .. ;;
	287	# *) answer='no' ;;
	288	# esac
	289	# fi
[54]	290	fi
[11]	291	fi
[153]	292
[11]	293	# summary
	294	echo '**********************'
	295	echo '*** Your folder is ...'
	296	echo '**********************'
	297	echo ${conf_wrf}
	298	echo '**********************'
	299	echo '****************************************'
	300	echo so ...
	301	echo your computer is ${machine} bits
	302	echo ${compilo} is your compiler
	303	if [[ "${compilo}" = "mpi" ]]
	304	then
	305	echo MPICH is in ${WHERE_MPI}
	306	fi
[1272]	307	echo you have ${dom} domains
[1588]	308	if [[ "${phys}" == "new" ]]
[153]	309	then
[1236]	310	echo number of processors can be changed without recompiling
	311	echo x points can be changed without recompiling
	312	echo y points can be changed without recompiling
[1272]	313	echo z points can be changed without recompiling
[1236]	314	echo number of tracers can be changed without recompiling
	315	else
	316	echo you will use ${numproc} processors
	317	echo you have ${lon} x points
	318	echo ' '${lat} y points
[1272]	319	echo ' '${level} z points
[1236]	320	echo ' '${tra} tracers
[153]	321	fi
[11]	322	echo '****************************************'
	323	# save answer
	324	\rm last 2> /dev/null
	325	touch last
	326	echo ${reply} >> last
[1588]	327	if [[ "${phys}" != "new" ]]
[1236]	328	then
	329	if [ "${compilo}" = "mpi" -o "${compilo}" = "mpifort" -o "${compilo}" = "mpixlf" ]
	330	then
[11]	331	echo ${numproc} >> last
[1236]	332	fi
	333	echo ${lon} >> last
	334	echo ${lat} >> last
[1272]	335	echo ${level} >> last
[1236]	336	fi
[11]	337	echo ${dom} >> last
[1588]	338	if [[ "${phys}" != *"new" ]]
[1236]	339	then
	340	echo ${tra} >> last
	341	fi
[11]	342
	343	#------------
	344	# log files
	345	#------------
	346	\rm log_compile 2> /dev/null
	347	\rm log_error 2> /dev/null
	348
	349	#-----------------
	350	# configure WRF
	351	#-----------------
	352	mv configure.wrf configure.wrf.bak 2> /dev/null
	353	########################
[30]	354	conf_wrf_forall="${compilo}_${machine}${single}${testflag}"
[142]	355
	356	#### in this case options are different because for LES, WRFV3 is used
	357	if [[ "${config}" == "les" ]]
	358	then
	359	conf_wrf_forall="${config}${compilo}_${machine}${single}${testflag}"
	360	fi
	361
[30]	362	case ${conf_wrf_forall} in
[142]	363
	364	#######LES-specific (WRFV3-based) -- previously in 'makeles'
	365	#######
	366
	367	lesmpi_64) ## MPI (dm) 64 bits [PS: remplacer 3 par 4 pour openMP]
	368	\rm conf > /dev/null 2> /dev/null ; touch conf ; echo 3 >> conf ; echo 1 >> conf
	369	\rm configure.wrf > /dev/null 2> /dev/null ; ./configure < conf > /dev/null 2> /dev/null
[1588]	370	sed s+"-lnetcdf"+"-lnetcdf -L../$phys/libo -llmd"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[142]	371	if [[ "$(hostname)" == "ciclad1.ipsl.jussieu.fr" ]]
	372	then
	373	echo "SPECIFIC CHANGES FOR CICLAD CLUSTER. EDIT makemeso IF YOU ENCOUNTER PROBLEMS."
	374	#sed s+"mpif90 -f90=$(SFC)"+"/usr/lib64/openmpi/1.4.2-pgf/bin/mpif90"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	375	#sed s+"mpicc -cc=$(SCC)"+"/usr/lib64/openmpi/1.4.2-gfortran/bin/mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[158]	376	sed s+"mpif90 -f90=\$(SFC)"+"/usr/lib64/openmpi/1.4.3-pgfgcc/bin/mpif90"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	377	sed s+"mpicc -cc=\$(SCC)"+"/usr/lib64/openmpi/1.4.3-pgfgcc/bin/mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[142]	378	else
[390]	379	#sed s+"mpif90"+"$WHERE_MPI/mpif90"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	380	#sed s+"mpicc"+"$WHERE_MPI/mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	381	#### OPENMPI
	382	sed s+"mpif90 -f90=\$(SFC)"+"$WHERE_MPI/mpif90"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	383	sed s+"mpicc -cc=\$(SCC)"+"$WHERE_MPI/mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[142]	384	fi
	385	sed s+"-fastsse"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	386	### pas forcement necessaire ici mais OK
	387	sed s+"-llmd"+"-llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	388	\rm conf > /dev/null ;;
	389
	390	lesmpifort_64) ## MPI (dm) 64 bits IFORT
	391	\rm conf > /dev/null 2> /dev/null ; touch conf ; echo 7 >> conf ; echo 1 >> conf
	392	\rm configure.wrf > /dev/null 2> /dev/null ; ./configure < conf > /dev/null 2> /dev/null
[1597]	393	if [[ "${phys}" != "void" ]]
	394	then
[1937]	395	sed s+"-lnetcdff"+"TOZTOZ"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	396	# ... in case there is netcdff save it in TOZTOZ so that it is not impacted in the following sed
[1597]	397	sed s+"-lnetcdf"+"-lnetcdf -L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[1937]	398	sed s+"TOZTOZ"+"-lnetcdff"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[1597]	399	else
	400	sed s+"-lnetcdf"+"-lnetcdf $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	401	fi
[142]	402	sed s+"mpif90"+"$WHERE_MPI/mpif90"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	403	sed s+"mpicc"+"$WHERE_MPI/mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	404	sed s+"-fastsse"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
[1597]	405	sed s+"O3"+"O3 -mcmodel=large -shared-intel"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[1587]	406	#sed s+"-lnetcdf -lnetcdff"+"-lnetcdf -lnetcdff -L../mars_lmd/libo -llmd"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[674]	407	if [ ${debug} -ne 0 ] # not working for xlf!
	408	then
	409	echo 'DEBUG DEBUG DEBUG DEBUG'
[790]	410	sed s+"# -g"+" -g -no-ftz -traceback -ftrapuv -fp-stack-check -check"+g configure.wrf > yeah
[674]	411	mv -f yeah configure.wrf
	412	fi
[142]	413	\rm conf > /dev/null ;;
	414
[2115]	415	lesopenmpi_64_single) echo Special option...
	416	\rm conf > /dev/null 2> /dev/null ; touch conf ; echo 13 >> conf ; echo 0 >> conf
	417	configure < conf > log_compile 2> log_error
	418	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
	419	sed s+"-lnetcdff"+'-lnetcdff -I$(WRF_SRC_ROOT_DIR)/inc'+g configure.wrf > yeah ; mv -f yeah configure.wrf ;;
	420
[2094]	421	lesgnu_64_single) echo Special option...
	422	\rm conf > /dev/null 2> /dev/null ; touch conf ; echo 11 >> conf ; echo 0 >> conf
	423	configure < conf > log_compile 2> log_error
	424	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
	425	sed s+"-lnetcdff"+'-lnetcdff -I$(WRF_SRC_ROOT_DIR)/inc'+g configure.wrf > yeah ; mv -f yeah configure.wrf ;;
[142]	426	#######
	427	#######LES-specific (WRFV3-based) -- previously in 'makeles'
	428
[11]	429	# GFORTRAN, 64 bits, no nesting
	430	gnu_64_single) cd arch ; ln -sf ../configure.defaults.gfortran64 configure.defaults ; cd ..
	431	echo 15 \| configure > log_compile 2> log_error
[1588]	432	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
[2094]	433	sed s+"-L../$phys/libo -llmd"+"-lnetcdf -lnetcdff -L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf ;;
[11]	434	# PGF90, 32 bits, no nesting
	435	pgf_32_single) echo 1 \| configure > log_compile 2> log_error
[1588]	436	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
[11]	437	# PGF90, 32 bits, nesting
	438	pgf_32_nest) echo 2 \| configure > log_compile 2> log_error
[1588]	439	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
[11]	440	# PGF90, 64 bits, no nesting
	441	pgf_64_single) echo 1 \| configure > log_compile 2> log_error
[330]	442	#### the following line is necessary because readtesassim has a line "use netcdf" in it!
[1588]	443	#sed s+"-L../$phys/libo -llmd"+"-L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	444	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
[11]	445	# PGF90, 64 bits, nesting
	446	pgf_64_nest) cd arch ; ln -sf ../configure.defaults.fix64nest configure.defaults ; cd ..
	447	echo 4 \| configure > log_compile 2> log_error
[1588]	448	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
[11]	449	# G95, 32 bits, no nesting
	450	g95_32_single) echo 13 \| configure > log_compile 2> log_error
[1588]	451	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
[24]	452	# G95, 64 bits, no nesting ### we modify configure.defaults to add x86_64 next to g95 in the header comment
	453	g95_64_single) cd arch ; sed s/"PC Linux i486 i586 i686, g95 compiler"/"PC Linux i486 i586 i686 x86_64, g95 compiler"/g configure.defaults > yeahyeahyeah ; rm configure.defaults ; mv yeahyeahyeah configure.defaults ; cd ..
	454	echo 14 \| configure > log_compile 2> log_error
[330]	455	##### marche pas ....
	456	#sed s+"-fno-second-underscore"+""+g configure.wrf > yeah ; mv -f yeah configure.wrf
[1588]	457	#sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
	458	#sed s+"-L../$phys/libo -llmd"+"-L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf ;;
	459	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf ;;
[24]	460	#sed s+"= g95"+"= /home/physastro/aspiga/mysoft/g95/g95-install/bin/x86_64-unknown-linux-gnu-g95"+g configure.wrf > yeah ; mv -f yeah configure.wrf;;
[11]	461	# IFORT, 64 bits, no nesting
	462	ifort_64_single) echo 5 \| configure > log_compile 2> log_error
	463	sed s+"-DIFORT_KLUDGE"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
[674]	464	if [ ${debug} -ne 0 ] # not working for xlf!
	465	then
	466	echo 'DEBUG DEBUG DEBUG DEBUG'
[790]	467	sed s+"# -g"+" -g -no-ftz -traceback -ftrapuv -fp-stack-check -check"+g configure.wrf > yeah
[674]	468	mv -f yeah configure.wrf
	469	fi
[11]	470	## !!! NETCDF must be defined
[1588]	471	sed s+"lio_grib_share"+"lio_grib_share -L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah
[11]	472	mv -f yeah configure.wrf ;;
	473	mpifort_64) # MPI+IFORT, 64 bits, no nesting / nesting
[1752]	474	echo 9 \| ./configure > log_compile 2> log_error
[1588]	475	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
[11]	476	sed s+"-f90=ifort"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	477	sed s+"-cc=icc"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	478	sed s+"-DIFORT_KLUDGE"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
[1440]	479	sed s+"-O1"+"-O1 -mcmodel=medium -shared-intel"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	480	sed s+"-O2"+"-O2 -mcmodel=medium -shared-intel"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	481	sed s+"-O3"+"-O3 -mcmodel=medium -shared-intel"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[674]	482	if [ ${debug} -ne 0 ] # not working for xlf!
	483	then
	484	echo 'DEBUG DEBUG DEBUG DEBUG'
[1752]	485	sed s+"#-g"+" -g -no-ftz -traceback -ftrapuv -fp-stack-check -check"+g configure.wrf > yeah
[674]	486	mv -f yeah configure.wrf
	487	fi
[11]	488	sed s+"O3"+"O2"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	489	#sed s+"O3"+"O0"+g configure.wrf > yeah ; mv -f yeah configure.wrf ### pour compilation rapide
	490	#-w -ftz -align all -fno-alias -fp-model precise >>> options indiquees dans WRF3
	491	#http://software.intel.com/en-us/articles/performance-tools-for-software-developers-building-wrf-with-the-intel-compilers/
	492	#### NB: RSL is replaced by RSL_LITE, better memory capacity, less seg fault
	493	sed s+"../external/RSL/RSL"+"../external/RSL_LITE"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	494	sed s+"-DWRF_RSL_IO"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	495	sed s+"-DRSL"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	496	sed s+"librsl.a"+"librsl_lite.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	497	sed s+"../external/RSL/gen"+"../external/RSL_LITE/gen"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	498	sed s+"../external/RSL/module"+"../external/RSL_LITE/module"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	499	sed s+"-lrsl"+"-lrsl_lite"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	500	sed s+"linux"+" "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	501	### necessary even if mpi-selector is used (no need in makegcm though)
	502	sed s+"mpif90"+"${WHERE_MPI}/mpif90"+g configure.wrf \| sed s+"mpicc"+"${WHERE_MPI}/mpicc"+g > yeah ; mv -f yeah configure.wrf
	503	sed s+"mpicc"+"mpicc -DMPI2_SUPPORT"+g configure.wrf > yeah ; mv -f yeah configure.wrf
	504	## !!! NETCDF must be defined
[1752]	505	if [[ "${phys}" != "void" ]]
	506	then
	507	sed s+"-L../$phys/libo -llmd"+"-L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah
	508	else
	509	sed s+"-lesmf_time"+"-lesmf_time $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah
	510	fi
[70]	511	mv -f yeah configure.wrf
	512	#### POUR LE TRAITEMENT PARTICULIERS des NESTS sur iDATAPLEX [cf. module_lmd_driver]
[71]	513	sed s+"ARCHFLAGS = "+"ARCHFLAGS = -DSPECIAL_NEST_SAVE "+g configure.wrf > yeah
[11]	514	mv -f yeah configure.wrf ;;
	515	# MPICH, 64 bits, no nesting / nesting
	516	mpi_64) cd arch ; ln -sf ../configure.defaults.fix64nest configure.defaults ; cd ..
	517	echo 3 \| configure > log_compile 2> log_error
[1588]	518	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
[227]	519	### the following line is necessary because readtesassim has a line "use netcdf" in it!
[1588]	520	sed s+"-L../$phys/libo -llmd"+"-L../$phys/libo -llmd $NETCDF/lib/libnetcdf.a"+g configure.wrf > yeah ; mv -f yeah configure.wrf
[11]	521	sed s+"mpif90"+"${WHERE_MPI}/mpif90"+g configure.wrf \| sed s+"mpicc"+"${WHERE_MPI}/mpicc"+g \| sed s+"mpicc"+"mpicc -DMPI2_SUPPORT"+g > yeah
[341]	522	#sed s+"mpif90"+"${WHERE_MPI}/mpif90"+g configure.wrf \| sed s+"mpicc"+"${WHERE_MPI}/mpicc"+g \| sed s+"mpicc"+"mpicc -DMPI2_SUPPORT -w -O3"+g > yeah
[11]	523	#\| sed s+"fastsse"+"fast"+g > yeah
[341]	524	mv -f yeah configure.wrf ;;
[335]	525	# #sed s+"-fastsse"+"-O2 -Munroll -Mcache_align"+g configure.wrf > yeah
	526	# ##sed s+"-fastsse"+"-O2 -fpic"+g configure.wrf > yeah ## marche pas, ILM problem
	527	# ##sed s+"-fastsse"+"-mcmodel=medium -Mlarge_arrays"+g configure.wrf > yeah ## marche pas, ILM problem
	528	#sed s+"-fastsse"+"-O3 -tp=nehalem-64 -fastsse -Mscalarsse -Mvect=sse -Mipa=fast"+g configure.wrf > yeah
	529	#sed s+"-fastsse"+"-O2 -Munroll -Mcache_align"+g configure.wrf > yeah
[341]	530	#sed s+"-fastsse"+""+g configure.wrf > yeah
	531	#sed s+"-fastsse"+"-fast"+g configure.wrf > yeah
	532	#sed s+"-fastsse"+"-Mvect=noaltcode -Msmartalloc -Mprefetch=distance:8 -Mfprelaxed"+g configure.wrf > yeah
	533	#mv -f yeah configure.wrf ;;
[11]	534	# MPICH, 64 bits, OK with periodic BC but no positive definite
	535	mpi_64_test) cd arch ; ln -sf ../configure.defaults.fix64nest configure.defaults ; cd ..
	536	echo 2 \| configure > log_compile 2> log_error
[1588]	537	sed -f physics.sed configure.wrf > yeah ; mv -f yeah configure.wrf
[11]	538	sed s+"mpif90"+"${WHERE_MPI}/mpif90"+g configure.wrf \| sed s+"mpicc"+"${WHERE_MPI}/mpicc"+g \| sed s+"mpicc"+"mpicc -DMPI2_SUPPORT"+g > yeah
	539	mv -f yeah configure.wrf ;;
	540	# XLF+MPICH on AIX machine (64 bits) with nesting, NB: the 32bits notice is not to be considered
	541	mpixlf_32) cd arch ; ln -sf ../configure.defaults.fix64nest configure.defaults ; cd ..
	542	echo 3 \| configure > log_compile 2> log_error
[1588]	543	sed -f physics.sed configure.wrf > yeah
[11]	544	mv -f yeah configure.wrf ;;
	545	# ANYTHING ELSE
	546	*) echo NO PRESETS ...
	547	if [ ${donotallow} -eq 0 ]
	548	then
	549	configure
	550	else
	551	# problem when an input file is used
	552	echo 'please cd to '$PWD' and type ./configure'
	553	exit
	554	fi ;;
	555	esac
	556	########################
	557
[142]	558
[156]	559	### here a case structure would be great
	560
[1588]	561	if [[ "${phys}" == "new" ]]
[29]	562	then
[142]	563	if [[ "${config}" == "les" ]] ### LES is different because of WRFV3
	564	then
	565	sed s+"ARCH_LOCAL = "+"ARCH_LOCAL = -DNEWPHYS "+g configure.wrf > yeah
	566	else
	567	sed s+"ARCHFLAGS = "+"ARCHFLAGS = -DNEWPHYS "+g configure.wrf > yeah
	568	fi
[29]	569	mv -f yeah configure.wrf
	570	fi
[11]	571
[1411]	572	### SCENARIO SCENARIO SCENARIO
	573	if [[ ! ("${scenario}" == "") ]] ### not supported with LES for the moment?
[118]	574	then
[1411]	575	# precompiling flag in WRF part
[2115]	576	sed s+"ARCHFLAGS = "+"ARCHFLAGS = -D${scenario} "+g configure.wrf > yeah
[118]	577	mv -f yeah configure.wrf
[1411]	578	# precompiling flag in LMD part
[1588]	579	cd $phys
[1411]	580	cp -Lrf makegcm_${compilo} yeah
	581	\rm makegcm_${compilo}
	582	sed s+"-DMESOSCALE"+"-D${scenario} -DMESOSCALE"+ yeah > makegcm_${compilo}
	583	chmod 755 makegcm_${compilo}
	584	\rm yeah
	585	cd ..
[118]	586	fi
	587
[156]	588	################
[1590]	589	#if [[ "${phys}" == "nophys_" ]]
	590	#then
	591	# if [[ "${config}" == "les" ]] ### LES is different because of WRFV3
	592	# then
	593	# sed s+"ARCH_LOCAL = "+"ARCH_LOCAL = -DNOPHYS "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	594	# sed s+"-L../$phys/libo -llmd"+""+g configure.wrf > yeah ; mv -f yeah configure.wrf
	595	# else
	596	# ### not tested yet but should be working
	597	# echo CAUTION CAUTION CAUTION NOT FULLY TESTED
	598	# sed s+"ARCHFLAGS = "+"ARCHFLAGS = -DNOPHYS "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	599	# sed s+"-L../$phys/libo -llmd"+""+g configure.wrf > yeah ; mv -f yeah configure.wrf
	600	# fi
	601	#fi
[156]	602	################
	603
[1597]	604	if [[ "${phys}" == "venus" ]]
	605	then
	606	sed s+"LIB_BUNDLED = "+"LIB_BUNDLED = /usr/lib64/liblapack.so \ "+g configure.wrf > yeah ; mv -f yeah configure.wrf
	607	fi
	608
[11]	609	if [ ${debug} -ne 0 ] # not working for xlf!
	610	then
	611	echo 'DEBUG DEBUG DEBUG DEBUG'
[790]	612	sed s+"# -g"+" -g -no-ftz -traceback -ftrapuv -fp-stack-check -check"+g configure.wrf > yeah
	613	#sed s+"# -g"+"-g -Ktrap=fp -Mbounds"+g configure.wrf > yeah
	614	#sed s+"# -g"+"-g"+g configure.wrf > yeah
[11]	615	mv -f yeah configure.wrf
	616	fi
	617
[1605]	618	if [[ "${phys}" == "prescribed" ]]
	619	then
	620	donotcompilephys=1
[1846]	621	fi
[1597]	622
[1846]	623	# some compiler and environment mess things up when using -C
	624	sed s+"-C"+""+g configure.wrf > yeah ; mv -f yeah configure.wrf
	625
[1588]	626	#exit
[11]	627	##################################################
	628	# compile physics
	629	##################################################
[1597]	630	if [ ${donotcompilephys} -eq 0 ] #\|\| [[ "${phys}" != "prescribed" ]]
[11]	631	then
	632
[1588]	633	cd $phys/
[11]	634
[1588]	635	if [[ "${phys}" == "new" ]]
[1212]	636	then
	637	divx=1
	638	divy=1
	639	else
[11]	640	# required size
	641	#----------------
	642	case ${numproc} in
[239]	643	1) divx=1 ; divy=1 ;;
	644	2) divx=1 ; divy=2 ;;
	645	4) divx=2 ; divy=2 ;;
	646	6) divx=2 ; divy=3 ;;
	647	8) divx=2 ; divy=4 ;;
	648	12) divx=3 ; divy=4 ;;
	649	16) divx=4 ; divy=4 ;;
	650	20) divx=4 ; divy=5 ;;
	651	24) divx=4 ; divy=6 ;;
	652	32) divx=4 ; divy=8 ;;
	653	64) divx=8 ; divy=8 ;;
	654	128) divx=8 ; divy=16 ;;
	655	*) echo not yet supported ; exit ;;
[11]	656	esac
[1212]	657	fi
[240]	658	physx=$(expr ${lon} - 1)
	659	restex=$(expr ${physx} \% ${divx})
	660	physy=$(expr ${lat} - 1)
	661	restey=$(expr ${physy} \% ${divy})
[239]	662	if [[ ${restex} != 0 \|\| ${restey} != 0 ]]
	663	then
	664	echo nx-1 shall be divided by ${divx}
	665	echo ny-1 shall be divided by ${divy}
	666	exit
	667	fi
[240]	668	physx=$(expr ${physx} \/ ${divx})
	669	physy=$(expr ${physy} \/ ${divy})
[239]	670	physz=$(expr ${level} - 1)
[11]	671
	672	# change this if you change num_soil_layers in WRF
	673	# -- default is 10
[1588]	674	if [[ "${phys}" == "new" ]]
[30]	675	then
[1212]	676	soilsize=18 ## nouvelle physique. ne sert a rien ici. voir comsoil.
[30]	677	else
	678	soilsize=10
	679	fi
[11]	680
	681	# GCM environment variables
	682	#--------------------------
	683	export LMDGCM=$PWD
	684	export LIBOGCM=$PWD/libo
	685
	686	# generate the appropriate dimphys
	687	#---------------------------------
[1597]	688	if [[ "${phys}" == "mars" ]]
	689	then
	690	cd libf/phymars
	691	elif [[ "${phys}" == "venus" ]]
	692	then
	693	cd libf/phyvenus
[2015]	694	elif [[ "${phys}" == "generic" ]]
[2014]	695	then
	696	cd libf/phystd
[1597]	697	fi
[11]	698	\rm dimphys.h 2> /dev/null
[1746]	699	# if [[ "${phys}" == "newphys_" ]]
	700	# then
	701	# ln -sf ../../meso_dimphys.h_ref . ## ne sert plus !!
	702	# else
	703	if [[ "${phys}" == "mars_lmd" ]]
[235]	704	then
[1272]	705	physize=$(expr ${physx} \* ${physy})
	706	sed s/--xsize--/${physx}/g meso_dimphys.h_ref \| sed s/--ysize--/${physy}/g \| sed s/--physize--/${physize}/g \| sed s/--zsize--/${physz}/g \| sed s/--soilsize--/${soilsize}/g > dimphys.h
	707	head -15 dimphys.h
[235]	708	fi
[1746]	709	#### TEST new new phys
[1578]	710	#if [[ "${phys}" == "newphys_" ]]
	711	#then
	712	# touch gr_fi_dyn.F.lien
	713	# ln -sf ../dyn3d/gr_fi_dyn.F . ## dommage, a corriger
[1746]	714	################################
	715	################################
	716	################################
[1578]	717	#fi
[1746]	718	####
	719	####
[11]	720	cd ../..
	721
	722	# prepare for nesting
	723	#---------------------
	724	cd libf
	725	duplicate${dom} 2> /dev/null
	726	cd ..
	727
	728	# compile physics
	729	#--------------------------
	730	\rm libf/grid/dimensions.h 2> /dev/null
	731	\rm -rf libo/* 2> /dev/null
	732	echo 1. compiling LMD physics ...
	733	echo compilation info in:
	734	echo $PWD/libo/log_compile_phys
[1746]	735
[1597]	736	if [ ${debug} -ne 0 ]
[11]	737	then
[1597]	738	if [[ "${phys}" == "mars" ]]
	739	then
	740	echo 'DEBUG DEBUG DEBUG DEBUG'
[1746]	741	nohup makegcm_${compilo} -debug -full -t ${tra} -p mars -d ${physz} testphys1d \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
[1597]	742	elif [[ "${phys}" == "venus" ]]
[1752]	743	then
[1597]	744	echo 'DEBUG DEBUG DEBUG DEBUG'
[1752]	745	nohup ./makelmdz -debug -full -p venus -d 51 rcm1d -arch linux-ifort -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys # on /u/ and /planeto/
	746	nohup ./makelmdz --debug p venus -d 51 rcm1d -arch linux-ifort -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
[2014]	747	elif [[ "${phys}" == "generic" ]]
	748	then
	749	echo 'DEBUG DEBUG DEBUG DEBUG'
	750	nohup ./makelmdz -debug -t ${tra} -p std -b 36x32 -s 1 -d 25 rcm1d -arch X64_MESU -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys #Proxb
[1597]	751	fi
[11]	752	else
[2037]	753	if [[ "${phys}" == "mars" ]]
[1597]	754	then
	755	nohup makegcm_${compilo} -t ${tra} -p mars -d ${physz} testphys1d \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
	756	elif [[ "${phys}" == "venus" ]]
	757	then
[1752]	758	nohup ./makelmdz -full -p venus -d 51 rcm1d -arch linux-ifort_meso -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys # on /u/ and /planeto/
	759	nohup ./makelmdz -p venus -d 51 rcm1d -arch linux-ifort_meso -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
	760	#nohup ./makelmdz -full -p venus -d 51 rcm1d -arch CICLADifort -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys # on CICLAD
	761	#nohup ./makelmdz -p venus -d 51 rcm1d -arch CICLADifort -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
	762	#nohup ./makelmdz -full -p venus -d 51 rcm1d -arch X64_MESU -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys #on MESU
	763	#nohup ./makelmdz -p venus -d 51 rcm1d -arch X64_MESU -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
	764	#nohup makelmdz -full -p venus -d 51 rcm1d -arch X64_OCCIGEN -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys #on OCCIGEN
	765	#nohup makelmdz -p venus -d 51 rcm1d -arch X64_OCCIGEN -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys
[2014]	766	elif [[ "${phys}" == "generic" ]]
	767	then
[2210]	768	echo $PWD/libo/log_compile_phys2
[2058]	769	nohup ./makelmdz -t 1 -p std -b 38x36 -full -s 1 -d 25 rcm1d -arch mascaret_gfortran_para -cpp MESOSCALE \| tee libo/log_compile_phys \| grep 'warnings' >> libo/log_compile_phys #Proxb
[2094]	770	nohup ./makelmdz -t 1 -p std -b 38x36 -s 1 -d 25 rcm1d -arch mascaret_gfortran_para -cpp MESOSCALE \| tee libo/log_compile_phys2 \| grep 'warnings' >> libo/log_compile_phys2 #Proxb
[2037]	771	fi
[11]	772	fi
	773	echo ... done
	774	# clean the duplicate routines
	775	cd libf
	776	duplicate1 2> /dev/null
	777	cd ..
	778
	779	# merge LMD executables in one lib
	780	#--------------------------------------
	781	cd libo
	782	mkdir temp
[1752]	783	if [[ "${phys}" == "mars" ]]
[1601]	784	then
[1752]	785	cp -f LINUX/.a temp
[2014]	786	else #VENUS and GENERIC
[2058]	787	# cp -f linux/.a temp/ # on /u/ and /planeto/
	788	cp -f /.a temp/ # on /u/ and /planeto/
[1752]	789	#cp -f /home/mlefevre/modipsl/lib/libioipsl.a temp/ #on CICLAD
	790	#cp -f X64/.a temp #on MESU and OCCIGEN
[2058]	791	cp -f $pathioipsl/libioipsl.a temp/
[1597]	792	fi
[11]	793	cd temp
[1597]	794	if [[ "${phys}" == "mars" ]]
	795	then
	796	ar x libbibio.a
	797	ar x libphymars.a
	798	ar x libaeronomars.a
[2014]	799	elif [[ "${phys}" == "venus" ]]
	800	then
[1597]	801	ar x libphyvenus.a
	802	ar x libmisc.a
	803	ar x libphy_common.a
[1601]	804	ar x libioipsl.a
[2014]	805	elif [[ "${phys}" == "generic" ]]
	806	then
	807	ar x libphystd.a
	808	ar x libmisc.a
	809	ar x libphy_common.a
	810	ar x libioipsl.a
[1597]	811	fi
[11]	812	\rm *.a
	813	ar r liblmd.a *
	814	cp -f liblmd.a ..
	815	cd ..
	816	\rm -r temp
	817	nm liblmd.a > liblmd_content
	818	# finish merge
	819	cd ..
[1588]	820	if [[ "${phys}" == "new" ]]
[1234]	821	then
[1597]	822	if [[ "${phys}" == "mars" ]]
	823	then
	824	# include modules for interfacing
	825	mv *.mod ../inc/
[2014]	826	else
[2058]	827	# mv ./libo/linux/.mod ../inc/ # on /u/ and /planeto/
	828	mv ./libo//.mod ../inc/ # on /u/ and /planeto/
[1752]	829	#mv ./libo/CICLAD/.mod ../inc/ # on CICLAD
	830	#mv ./libo/X64/.mod ../inc/ # on MESU and OCCIGEN
[2058]	831	cp -f $pathioipsl/*.mod ../inc/
[1597]	832	fi
[1234]	833	fi
	834
[1597]	835
[11]	836	# save a copy
	837	#--------------
[1247]	838	cp -f libo/liblmd.a libo/liblmd.a_${lon}_${lat}_${level}_${dom}_${tra}
[11]	839	echo '****************************************'
	840
	841	# ok
	842	#----
	843	cd ..
	844
	845	# manage nest includes in module_lmd_driver.F
	846	#----
	847	cp call_meso_inifis$dom.inc call_meso_inifis.inc
	848	cp call_meso_physiq$dom.inc call_meso_physiq.inc
	849
	850
	851	fi
	852	##################################################
	853	# END compile physics
	854	##################################################
	855
	856	#------------------
	857	# compile WRF
	858	#------------------
	859	if [ ${justphys} -eq 0 ]
	860	then
	861
	862	echo 2. compiling WRF dynamical core ...
	863
[1590]	864	#if [[ "${phys}" == "nophys_" ]]
	865	#then
	866	# echo 'NO LMD PHYSICS included'
	867	#else
	868	# if [[ ! ( -f "call_meso_physiq.inc" ) ]]
	869	# then
	870	# echo 'did you compile the physics ? no call_meso_physiq.inc !'
	871	# exit
	872	# fi
	873	#fi
[11]	874
	875	# be sure to compile with the most recent physics
	876	touch phys/module_lmd_driver.F
	877
	878	# talk to user
	879	echo '>>> compiling ... this may be long ... <<<'
	880	echo check progress in:
	881	echo $PWD/log_compile
	882	echo check possible errors in:
	883	echo $PWD/log_error
	884
	885	# compile ...
[1588]	886	echo '>>> YOUR CONFIG IS : '${config}
[11]	887	case ${config} in
[1588]	888	'real') ./compile em_real > log_compile 2> log_error
[11]	889	# save executables
	890	cd main
[68]	891	if [[ -f real.exe ]]
	892	then
	893	echo 'Looks good ! real.exe is here...'
	894	fi
[11]	895	if [[ -f wrf.exe ]]
	896	then
	897	echo 'Looks good ! wrf.exe is here...'
	898	fi
[1247]	899	cp -f real.exe ../../real_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
	900	cp -f wrf.exe ../../wrf_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
[11]	901	cd .. ;;
[68]	902	'ideal') #mkdir 'test/em_quarter_ss' 2> /dev/null
[1588]	903	#echo '>>> YOUR CONFIG IS : '${config}
[421]	904	./compile em_quarter_ss > log_compile 2> log_error
[11]	905	# save executables
	906	cd main
[68]	907	if [[ -f ideal.exe ]]
	908	then
	909	echo 'Looks good ! ideal.exe is here...'
	910	fi
[11]	911	if [[ -f wrf.exe ]]
	912	then
	913	echo 'Looks good ! wrf.exe is here...'
	914	fi
[1247]	915	cp -f ideal.exe ../../ideal_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
	916	cp -f wrf.exe ../../wrf_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
[11]	917	cd .. ;;
[1588]	918	'les') #echo '>>> YOUR CONFIG IS : '${config}
[142]	919	mkdir 'test/em_les' 2> /dev/null
[2094]	920	./compile em_les ###> log_compile 2> log_error
[142]	921	# save executables
	922	cd main
	923	if [[ -f ideal.exe ]]
	924	then
	925	echo 'Looks good ! ideal.exe is here...'
	926	fi
	927	if [[ -f wrf.exe ]]
	928	then
	929	echo 'Looks good ! wrf.exe is here...'
	930	fi
[1247]	931	cp -f ideal.exe ../../ideal_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
	932	cp -f wrf.exe ../../wrf_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe
[142]	933	cd .. ;;
	934	*) echo not supported... please use ; echo ideal les ; exit ;;
[11]	935	esac
	936	echo '*****last lines from log_error*******'
	937	tail -n 20 log_error
	938	fi
	939
	940	# the end
	941	echo '****************************************'
	942	echo 'done.'
	943	echo '****************************************'
[1247]	944	cp last ../makemeso_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}
[11]	945	mv last ../../
[1247]	946	svn info ../../ > ../makemeso_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.svn.info
[11]	947
[1445]	948	# link latest compiled folder as LATEST
	949	cd ../../
[1448]	950	rm -rf LATEST
[1445]	951	ln -sf ${conf_wrf} LATEST
	952
[1855]	953	# link latest compiled exec
	954	cd LATEST
	955	case ${config} in
	956	'real') ln -sf real_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe real.exe ;;
	957	'ideal') ln -sf ideal_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe ideal.exe ;;
	958	'les') ln -sf ideal_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe ideal.exe ;;
	959	esac
	960	ln -sf wrf_x${lon}_y${lat}_z${level}_d${dom}_t${tra}_p${numproc}.exe wrf.exe
	961	cd ..
	962
[11]	963	# add here specific messages
	964	if [[ "${dom}" != "1" ]]
	965	then
	966	nest=$(expr ${lon} + 4)
	967	echo NB: in namelist.input, please set:
	968	echo '
	969	max_dom = '$dom'
	970	s_we = 1,1,
	971	e_we = '$lon','$nest',
	972	s_sn = 1,1,
	973	e_sn = '$lat','$nest',
	974	s_vert = 1,1,
	975	e_vert = '$level','$level','
	976	fi
	977
[1588]	978

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