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runmeso @ 1273

Last change on this file since 1273 was 1272, checked in by aslmd, 12 years ago
MESOSCALE. adapted scripts and manual for free vertical levels.
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1	#! /bin/bash
2
3	#########################################################
4	# runmeso : #
5	# utility to combine compilation + preprocessing + run #
6	#########################################################
7	###############################
8	# Author: A. Spiga #
9	# New version : December 2008 #
10	# Modified : 2009-2010 #
11	# New physics : 2011 #
12	###############################
13
14	# TODO: - GCM compile
15	# - NETCDF
16	# - (modif registry)
17	# - quick restart
18
19
20	###########################################
21	###########################################
22	###########################################
23
24
25	i_want_to_compile=1
26	scenario=""
27	#scenario="storm"
28
29	###########################################
30	###########################################
31
32	fresh=0
33	while getopts "f" options; do
34	case $options in
35	f ) fresh=1;;
36	esac
37	done
38
39	if [[ "${MESO}" = "" ]]
40	then
41	echo "Please initialize the variable MESO in your environnement (or modify scripts)"
42	exit
43	fi
44	####################################
45	# A FEW DEFINITIONS YOU CAN MODIFY #
46	####################################
47	main_folder=$MESO
48	meso_folder=${main_folder}'/LMD_MM_MARS'
49	calendar=${main_folder}'/LMD_MM_MARS/SIMU/calendar'
50	simu_folder=$PWD
51
52	################
53	# WELCOME USER #
54	################
55	echo '**********************************************'
56	echo '** LMD Martian Mesoscale Model launcher **'
57	echo '**********************************************'
58	echo '** User >>> '$(whoami)
59	echo '** Hostname >>> '$(hostname)
60	echo '** Hardware >>> '$(uname -m)
61	echo '** Processor >>> '$(uname -p)
62	echo '**********************************************'
63
64	######## NEWPHYS ???
65	if [[ ! ( -f "run.def" ) ]]
66	then
67	newphys=0
68	else
69	echo '** New LMD physics >>> YES [run.def is here]'
70	echo '**********************************************'
71	newphys=1
72	if [[ ! ("${scenario}" == "") ]]
73	then
74	echo '** Scenario >>>' ${scenario}
75	echo '**********************************************'
76	fi
77	fi
78
79	##########################
80	# GET INFO FROM NAMELIST #
81	##########################
82	#echo '***********************'
83	#echo '** Your settings **'
84	#echo '***********************'
85	echo '** Simulation directory >>> '${simu_folder}
86	if [[ ! ( -f "namelist.input" ) ]]
87	then
88	echo 'no namelist.input file !'
89	exit
90	fi
91	#
92	# READ INFO NEEDED FOR INIT
93	#
94	year=$(more ${simu_folder}/namelist.input \| grep start_year \| awk '{print $3}' \| sed s+','+''+g)
95	month=$(more ${simu_folder}/namelist.input \| grep start_month \| awk '{print $3}' \| sed s+','+''+g)
96	day=$(more ${simu_folder}/namelist.input \| grep start_day \| awk '{print $3}' \| sed s+','+''+g)
97	hour=$(more ${simu_folder}/namelist.input \| grep start_hour \| awk '{print $3}' \| sed s+','+''+g)
98	wrf_date=${year}'-'${month}'-'${day}'_00:00:00'
99	daygcm=$(more ${calendar} \| grep ${wrf_date} \| awk '{print $2}')
100	lsubs=$(more ${calendar} \| grep ${wrf_date} \| awk '{print $3}')
101	eyear=$(more ${simu_folder}/namelist.input \| grep end_year \| awk '{print $3}' \| sed s+','+''+g)
102	emonth=$(more ${simu_folder}/namelist.input \| grep end_month \| awk '{print $3}' \| sed s+','+''+g)
103	eday=$(more ${simu_folder}/namelist.input \| grep end_day \| awk '{print $3}' \| sed s+','+''+g)
104	ehour=$(more ${simu_folder}/namelist.input \| grep end_hour \| awk '{print $3}' \| sed s+','+''+g)
105	ewrf_date=${eyear}'-'${emonth}'-'${eday}'_00:00:00'
106	edaygcm=$(more ${calendar} \| grep ${ewrf_date} \| awk '{print $2}')
107	elsubs=$(more ${calendar} \| grep ${ewrf_date} \| awk '{print $3}')
108	echo '** Start date >>> '${year}'-'${month}'-'${day}" [sol="${daygcm}", Ls="${lsubs}"]"
109	echo '** End date >>> '${eyear}'-'${emonth}'-'${eday}" [sol="${edaygcm}", Ls="${elsubs}"]"
110	#
111	# READ INFO NEEDED FOR DOMAIN
112	#
113	interval_seconds="$(more ${simu_folder}/namelist.input \| grep -e '[^!]interval_seconds =')"
114	if [[ "${interval_seconds}" = "" ]]
115	then
116	interval_seconds="interval_seconds = 3700 !! (p2) Frequency of large-scale fields update (s)"
117	fi
118	#
119	max_dom="$(more ${simu_folder}/namelist.input \| grep -e '[^!]max_dom =')"
120	if [[ "${max_dom}" = "" ]]
121	then
122	max_dom="max_dom = 1 !! (r)(n)(p2) Total number of domains"
123	fi
124	#
125	parent_id="$(more ${simu_folder}/namelist.input \| grep -e '[^!]parent_id =')"
126	if [[ "${parent_id}" = "" ]]
127	then
128	parent_id="parent_id = 0, !! (n)(p2) Associated parent domain"
129	fi
130	#
131	i_parent_start="$(more ${simu_folder}/namelist.input \| grep -e '[^!]i_parent_start =')"
132	if [[ "${i_parent_start}" = "" ]]
133	then
134	i_parent_start="i_parent_start = 0, !! (n)(p2) x-position of the bottom-left nest corner"
135	fi
136	#
137	j_parent_start="$(more ${simu_folder}/namelist.input \| grep -e '[^!]j_parent_start =')"
138	if [[ "${j_parent_start}" = "" ]]
139	then
140	j_parent_start="j_parent_start = 0, !! (n)(p2) y-position of the bottom-left nest corner"
141	fi
142	#
143	parent_grid_ratio="$(more ${simu_folder}/namelist.input \| grep -e '[^!]parent_grid_ratio =')"
144	if [[ "${parent_grid_ratio}" = "" ]]
145	then
146	parent_grid_ratio="parent_grid_ratio = 1, !! (n)(p2) Ratio of horizontal resolution parent/nest"
147	fi
148	#
149	e_we="$(more ${simu_folder}/namelist.input \| grep -e '[^!]e_we =')"
150	e_sn="$(more ${simu_folder}/namelist.input \| grep -e '[^!]e_sn =')"
151	#
152	dx="$(more ${simu_folder}/namelist.input \| grep -e '[^!]dx =' \| awk '{print $3}' \| sed s+','+''+g)"
153	dy="$(more ${simu_folder}/namelist.input \| grep -e '[^!]dy =' \| awk '{print $3}' \| sed s+','+''+g)"
154
155	#
156	# READ INFO NEEDED FOR COMPILATION
157	#
158	nx=$(more ${simu_folder}/namelist.input \| grep -e '[^!]e_we =' \| awk '{print $3}' \| sed s+','+''+g)
159	ny=$(more ${simu_folder}/namelist.input \| grep -e '[^!]e_sn =' \| awk '{print $3}' \| sed s+','+''+g)
160	nz=$(more ${simu_folder}/namelist.input \| grep -e '[^!]e_vert =' \| awk '{print $3}' \| sed s+','+''+g)
161	nest=$(more ${simu_folder}/namelist.input \| grep -e '[^!]max_dom =' \| awk '{print $3}' \| sed s+','+''+g)
162	if [[ "${nest}" = "" ]]
163	then
164	nest='1'
165	fi
166	numcallphys=$(ls callphys*def \| wc -l)
167	if [[ ${numcallphys} -lt ${nest} ]]
168	then
169	echo '**********'
170	echo You should have ${nest} callphys.def' file(s)' !!
171	exit
172	fi
173	mars_scenario=$(more ${simu_folder}/namelist.input \| grep mars \| awk '{print $3}' \| sed s+','+''+g)
174
175	if [[ ${newphys} -eq 1 ]]
176	then
177	tracers='999'
178	else
179	case ${mars_scenario} in
180	0) tracers='1' ;;
181	1) tracers='2' ;;
182	2) tracers='1' ;;
183	3) tracers='2' ;;
184	10) tracers='1' ;;
185	11) tracers='4' ;;
186	12) tracers='6' ;;
187	42) tracers='18' ;;
188	*) tracers='1' ;;
189	esac
190	fi
191	echo '** Domain(s) >>> '${nest}
192	echo '** Tracer(s) >>> '${tracers}
193	echo '** Grid points >>> '${nx}" x "${ny}" x "${nz}
194	echo '** Horizontal resolution >>> '${dx}
195
196	###########
197	# ACTIONS #
198	###########
199	echo '**********************************************'
200	echo "** The runmeso script does it for you !"
201	echo '**********************************************'
202	echo "** Step 0: compile the model if not done yet"
203	echo "** Step 1: run GCM and prepare inputs"
204	echo "** Step 2: interpolate on domain horizontal grid"
205	echo "** Step 3: interpolate on chosen vertical levels"
206	echo "** Step 4: run the model"
207	echo "************************* Please make a choice"
208	echo " 1 --> Perform steps 0 1 2 3 4 [ -1: step 0 skipped]"
209	echo " 2 --> Perform steps 0 2 3 4 [ -2: step 0 skipped]"
210	echo " 3 --> Perform steps 0 3 4 [ -3: step 0 skipped]"
211	echo " 4 --> Perform steps 0 4 [ -4: step 0 skipped]"
212	echo "11 --> Perform steps 0 1 2 3 [-11: step 0 skipped]"
213	echo "12 --> Perform steps 0 2 3 [-12: step 0 skipped]"
214	echo "13 --> Perform steps 0 3 [-13: step 0 skipped]"
215	echo " 0 --> Perform step 0 only"
216	echo "99 --> Oops ! Exit now please."
217	echo '**********************************************'
218	echo "What is your choice? " ; read step
219	if [[ ${step} -lt 0 ]]
220	then
221	step=$(expr 0 - ${step})
222	i_want_to_compile=0
223	echo ".... ok, I skip the compiling & linking step. you'll just be asked the compiler you previously defined."
224	fi
225	case ${step} in
226	99) exit ;;
227	0) gcmstep=0 ; wpsstep=0 ; realstep=0 ; wrfstep=0 ;;
228	1) gcmstep=1 ; wpsstep=1 ; realstep=1 ; wrfstep=1 ;;
229	2) gcmstep=0 ; wpsstep=1 ; realstep=1 ; wrfstep=1 ;;
230	3) gcmstep=0 ; wpsstep=0 ; realstep=1 ; wrfstep=1 ;;
231	4) gcmstep=0 ; wpsstep=0 ; realstep=0 ; wrfstep=1 ;;
232	11) gcmstep=1 ; wpsstep=1 ; realstep=1 ; wrfstep=0 ;;
233	12) gcmstep=0 ; wpsstep=1 ; realstep=1 ; wrfstep=0 ;;
234	13) gcmstep=0 ; wpsstep=0 ; realstep=1 ; wrfstep=0 ;;
235	) echo "* I guess you do not know what to do. Let's start from the beginning."
236	gcmstep=1 ; wpsstep=1 ; realstep=1 ; wrfstep=1 ;;
237	esac
238
239
240	###################################
241	# LINK THE EXECUTABLES OR COMPILE #
242	###################################
243	echo '**********************************************'
244	echo "** Compiling option "
245	echo "** <1> pgf90"
246	echo "** <2> g95"
247	echo "** <3> mpi+pgf90"
248	echo "** <4> ifort"
249	echo "** <5> mpi+ifort"
250	echo "** .... more in makemeso ...."
251	echo '**********************************************'
252	echo "Your choice ? (1-5)" ; read compilo
253	if [[ "${compilo}" == "" \|\| ${compilo} -lt 1 \|\| ${compilo} -gt 5 ]]
254	then
255	echo "** well, let's try g95"
256	compilo=2
257	fi
258	if [[ ${compilo} -eq 3 \|\| ${compilo} -eq 5 ]]
259	then
260	echo How many processors ? e.g. 1, 2, 4, 6, 8, 12, 16, 20, 24, 32, 64, 128 ; read numproc
261	else
262	numproc=1
263	fi
264	#if [[ ${i_want_to_compile} -ge 1 ]]
265	#then
266	cd ${meso_folder}
267	echo ${compilo} > tmp
268	if [[ ${compilo} -eq 3 ]]
269	then
270	echo ${numproc} >> tmp
271	fi
272	echo ${nest} >> tmp
273
274	if [[ ${newphys} -eq 0 ]]
275	then
276	./makemeso -d < tmp > /dev/null
277	else
278	if [[ "${scenario}" == "" ]]
279	then
280	./makemeso -d -p < tmp > /dev/null
281	else
282	./makemeso -d -p -s ${scenario} < tmp > /dev/null
283	fi
284	fi
285	\rm tmp 2> /dev/null
286	work_folder=${meso_folder}'/'$(more what_folder)
287	echo 'work_folder : '${work_folder}
288	\rm what_folder 2> /dev/null
289
290	##################### NB: define the domain if was not done yet
291	if [[ -f "${simu_folder}/namelist.wps" ]]
292	then
293	happy='y'
294	else
295	happy=''
296	fi
297	if [[ ${step} -eq 1 \|\| ${step} -eq 2 \|\| ${step} -eq 11 \|\| ${step} -eq 12 ]]
298	then
299	while [[ "${happy}" != "y" ]]
300	do
301	#vi ${simu_folder}/namelist.input
302	if [[ ! ( -d "${work_folder}/WPS" ) ]]
303	then
304	echo 'no WPS. you need to install it for your architecture'
305	exit
306	fi
307	\rm ${simu_folder}/namelist.wps 2> /dev/null
308	echo '**********************************************'
309	echo " !!! NO namelist.wps FILE FOUND !!!"
310	echo '**********************************************'
311	echo 'Please define the domain : '
312	echo " - 1/4 Projection: polar lambert mercator ? previous is "${proj} ; read proj
313	echo " - 2/4 Data source (multiple if nests): gcm 32ppd 64ppd 64ppd_noHRti 32ppd_HRalb ? previous is "${data_source} ; read data_source
314	echo " - 3/4 North Latitude of domain centre ? previous is "${lat} ; read lat
315	echo " - 4/4 East Longitude of domain centre ? previous is "${lon} ; read lon
316	#####
317	sed s+"__INTERVAL_SECONDS__"+"${interval_seconds}"+g ${meso_folder}/SIMU/namelist.wps.template \| sed s+"__MAX_DOM__"+"${max_dom}"+g \| sed s+"__PARENT_ID__"+"${parent_id}"+g \| sed s+"__PARENT_GRID_RATIO__"+"${parent_grid_ratio}"+g \| sed s+"__I_PARENT_START__"+"${i_parent_start}"+g \| sed s+"__J_PARENT_START__"+"${j_parent_start}"+g \| sed s+"__E_WE__"+"${e_we}"+g \| sed s+"__E_SN__"+"${e_sn}"+g \| sed s+"__DX__"+"${dx}"+g \| sed s+"__DY__"+"${dy}"+g \| sed s+"__PROJ__"+"${proj}"+g \| sed s+"__DATA_SOURCE__"+"${data_source}"+g \| sed s+"__LAT__"+"${lat}"+g \| sed s+"__LON__"+"${lon}"+g \| sed s+'0000-00-00_00:00:00'+${year}'-'${month}'-'${day}'_'${hour}':00:00'+g \| sed s+'1111-11-11_11:11:11'+${eyear}'-'${emonth}'-'${eday}'_'${ehour}':00:00'+g > ${simu_folder}/namelist.wps
318	####
319	if [[ ${nest} -gt 1 ]]
320	then
321	echo '**********************************************'
322	echo "USEFUL RULES for NESTS :"
323	echo "* parent_grid_ratio divides (e_we-s_we+1)"
324	echo "* nproc divides e_we-1"
325	echo "* nproc divides e_we-1"
326	fi
327	if [[ ${nest} -ge 4 ]]
328	then
329	echo more than 3 nests, not supported.
330	echo ...but not difficult to implement, cf. user manual.
331	exit
332	fi
333	####
334	ln -sf ${simu_folder}/namelist.wps ${work_folder}/WPS/namelist.wps
335	echo '**********************************************'
336	echo OK, thank you. Please wait... ncview will pop up soon !
337	cd ${work_folder}/WPS/
338	\rm geo_em.d0*.nc 2> /dev/null
339	./geogrid.exe #> /dev/null 2> /dev/null
340	ncview geo_em.d01.nc > /dev/null 2> /dev/null &
341	if [[ -f "geo_em.d02.nc" ]]
342	then
343	ncview geo_em.d02.nc > /dev/null 2> /dev/null &
344	fi
345	if [[ -f "geo_em.d03.nc" ]]
346	then
347	ncview geo_em.d03.nc > /dev/null 2> /dev/null &
348	fi
349	cd ${simu_folder}/
350	echo '**********************************************'
351	echo 'Are you happy with the results ? type y if yes, any key if no' ; read happy
352	done
353	fi
354	#####################
355	if [[ ${i_want_to_compile} -ge 1 ]]
356	then
357	cd ${simu_folder}
358	## corresponding executables
359	wrfexe=${work_folder}/wrf_x${nx}_y${ny}_z${nz}_d${nest}_t${tracers}_p${numproc}.exe
360	realexe=${work_folder}/real_x${nx}_y${ny}_z${nz}_d${nest}_t${tracers}_p${numproc}.exe
361	if [[ ${fresh} -eq 0 && -f ${wrfexe} ]]
362	then
363	echo '**********************************************'
364	echo " !!! wrf.exe exists in ${work_folder}"
365	echo '**********************************************'
366	echo "Recompile ? ('yes' to accept, any key to refuse)" ; read reply
367	else
368	reply='yes'
369	fi
370	echo '********************************************** OK thanks. Now please wait...'
371	echo ' '
372	if [[ "${reply}" == "yes" ]]
373	then
374	#####################
375	echo "** "Begin compilation process...
376	\rm ${wrfexe} 2> /dev/null
377	\rm ${realexe} 2> /dev/null
378	#
379	# CREATE makemeso_input
380	#
381	\rm ${simu_folder}/makemeso_input 2> /dev/null
382	touch ${simu_folder}/makemeso_input
383	echo ${compilo} >> ${simu_folder}/makemeso_input
384	if [[ ${newphys} -eq 0 ]]
385	then
386	if [[ "${compilo}" = "3" \|\| "${compilo}" = "5" ]]
387	then
388	echo ${numproc} >> ${simu_folder}/makemeso_input
389	fi
390	echo ${nx} >> ${simu_folder}/makemeso_input
391	echo ${ny} >> ${simu_folder}/makemeso_input
392	echo ${nz} >> ${simu_folder}/makemeso_input
393	fi
394	echo ${nest} >> ${simu_folder}/makemeso_input
395	if [[ ${newphys} -eq 0 ]]
396	then
397	echo ${tracers} >> ${simu_folder}/makemeso_input
398	fi
399	#
400	# COMPILE THE MODEL
401	#
402	cd ${meso_folder}
403	#if [[ "${changeregis}" = "1" ]]
404	#then
405	# cd ${work_folder}/WRFV2/Registry
406	# \rm Registry 2> /dev/null
407	# ./Registry.bash
408	# cd ../../..
409	#fi
410	if [[ ${fresh} -eq 0 ]]
411	then
412	##******
413	if [[ ${newphys} -eq 0 ]]
414	then
415	./makemeso -r < ${simu_folder}/makemeso_input
416	else
417	if [[ "${scenario}" == "" ]]
418	then
419	./makemeso -r -p < ${simu_folder}/makemeso_input
420	else
421	./makemeso -r -p -s ${scenario} < ${simu_folder}/makemeso_input
422	fi
423	fi
424	##******
425	else
426	##******
427	if [[ ${newphys} -eq 0 ]]
428	then
429	./makemeso -r -f < ${simu_folder}/makemeso_input
430	else
431	if [[ "${scenario}" == "" ]]
432	then
433	./makemeso -r -p -f < ${simu_folder}/makemeso_input
434	else
435	./makemeso -r -p -f -s ${scenario} < ${simu_folder}/makemeso_input
436	fi
437	fi
438	##******
439	fi
440
441	if [[ -f ${wrfexe} ]]
442	then
443	echo "** "seems OK ... linking executables
444	ln -sf ${wrfexe} ${simu_folder}/wrf.exe
445	ln -sf ${realexe} ${simu_folder}/real.exe
446	chmod a+x ${realexe} ${wrfexe} ## sait-on jamais
447	cd $simu_folder
448	else
449	echo no ${wrfexe}
450	echo problem with the compilation
451	exit
452	fi
453	else
454	#echo simply linking existing executables...
455	ln -sf ${wrfexe} ${simu_folder}/wrf.exe
456	ln -sf ${realexe} ${simu_folder}/real.exe
457	chmod a+x ${realexe} ${wrfexe} ## sait-on jamais
458	fi
459	fi
460
461	######################################
462	# 1. RUN GCM FOR INIT/BDY CONDITIONS #
463	######################################
464	if [ ${gcmstep} -eq 1 ]
465	then
466	echo '************************************'
467	echo '** Step 1: Prepare GCM inputs **'
468	echo '************************************'
469	#
470	# run GCM
471	#
472	if [[ ${newphys} -eq 0 ]]
473	then
474	cd ${main_folder}'/LMDZ.MARS/'
475	else
476	cd ${main_folder}'/LMDZ.MARS.new/'
477	fi
478	if [[ ! ( -f "gcm.e" ) ]]
479	then
480	echo "Oops. There is no gcm.e, you shall compile the GCM first."
481	exit
482	fi
483	cd myGCM
484	echo ${daygcm} \| ./launch_gcm
485	if [[ ! -d startbase ]]
486	then
487	echo "I guess I should stop here."
488	exit
489	fi
490	#
491	# prepare files for WPS
492	#
493	cd ${work_folder}
494	if [[ -f ${work_folder}/PREP_MARS/create_readmeteo.exe && -f ${work_folder}/PREP_MARS/readmeteo.exe ]]
495	then
496	### This is now generic so PREP_MARS could be moved out of DIRCOMPs files
497	cd ${work_folder}/PREP_MARS/
498	if [[ ${compilo} -eq 1 \|\| ${compilo} -eq 3 ]]
499	then
500	ln -sf compile_pgf compile
501	fi
502	if [[ ${compilo} -eq 2 ]]
503	then
504	ln -sf compile_g95 compile
505	fi
506	if [[ ${compilo} -eq 4 \|\| ${compilo} -eq 5 ]]
507	then
508	ln -sf compile_ifort compile
509	fi
510	if [[ ${compilo} -gt 5 ]]
511	then
512	echo "please adapt compile in PREP_MARS"
513	fi
514	./compile_and_exec
515	#echo 1 \| ./create_readmeteo.exe
516	#./readmeteo.exe < readmeteo.def
517	else
518	echo please compile the PREP_MARS utilities in ${work_folder}
519	exit
520	fi
521	fi
522
523	###################################
524	# 2. RUN WRF PREPROCESSING SYSTEM #
525	###################################
526	if [ ${wpsstep} -eq 1 ]
527	then
528	echo '*****************************************'
529	echo '**** Step 2: Perform WPS interpolations *'
530	echo '*****************************************'
531	if [[ -f ${work_folder}/WPS/geogrid.exe && -f ${work_folder}/WPS/metgrid.exe ]]
532	then
533	\rm -rf ${simu_folder}/met_em 2> /dev/null
534	mkdir ${simu_folder}/met_em
535	cd ${work_folder}/WPS/
536	\rm -rf ${work_folder}/WPS/WRFFEED/current 2> /dev/null
537	mkdir ${work_folder}/WPS/WRFFEED/current
538	ln -sf ${simu_folder}/namelist.wps ${work_folder}/WPS/namelist.wps
539	#mv namelist.wps namelist.wps.tmp
540	#sed s+'0000-00-00_00:00:00'+${year}'-'${month}'-'${day}'_'${hour}':00:00'+g namelist.wps.tmp \| sed s+'1111-11-11_11:11:11'+${eyear}'-'${emonth}'-'${eday}'_'${ehour}':00:00'+g > namelist.wps
541	./geogrid.exe
542	./metgrid.exe
543	#mv namelist.wps ${simu_folder}
544	#mv namelist.wps.tmp namelist.wps
545	namedata=$(date +simu_%d%h%Y_%H%M)
546	mv ${work_folder}/WPS/WRFFEED/current ${work_folder}'/WPS/WRFFEED/'${namedata}
547	echo met_em files in $namedata
548	cd ${simu_folder}/met_em
549	ln -sf ${work_folder}/WPS/WRFFEED/${namedata}/* .
550	cd ${simu_folder}
551	else
552	echo please compile the WPS utilities in ${work_folder}
553	exit
554	fi
555	fi
556
557	###################
558	# 3. RUN REAL.EXE #
559	###################
560	if [ ${realstep} -eq 1 ]
561	then
562	echo '*******************************'
563	echo '**** Step 3: Execute real.exe *'
564	echo '*******************************'
565	cd ${simu_folder}
566	if [[ ! -d met_em ]]
567	then
568	ls
569	echo "PB: no met_em files:"
570	echo "mkdir met_em folder then link met_em** files !"
571	exit
572	fi
573	cd ${simu_folder}/met_em
574	ln -sf ${simu_folder}/namelist.input .
575	ln -sf ${simu_folder}/real.exe .
576	ln -sf ${simu_folder}/levels .
577	rm -rf ${simu_folder}/met_em/wrfbdy* 2> /dev/null
578	rm -rf ${simu_folder}/met_em/wrfinput* 2> /dev/null
579	if [[ ${compilo} -eq 3 \|\| ${compilo} -eq 5 ]]
580	then
581	rm -rf ${simu_folder}/met_em/rsl.* 2> /dev/null
582	echo "check in "${simu_folder}"/met_em/rsl.out.0000"
583	./real.exe
584	tail -n 4 ${simu_folder}"/met_em/rsl.out.0000"
585	else
586	rm -rf ${simu_folder}/met_em/log* 2> /dev/null
587	echo "check in "${simu_folder}"/met_em/log_real"
588	real.exe > log_real
589	tail -n 4 ${simu_folder}"/met_em/log_real"
590	fi
591	if [[ -f ${simu_folder}/met_em/wrfinput_d01 && -f ${simu_folder}/met_em/wrfbdy_d01 ]]
592	then
593	echo ok... link ini and bdy conditions
594	cd ${simu_folder}
595	ln -sf ${simu_folder}/met_em/wrf_d0 .
596	else
597	echo mmm... there was a problem, see log files in met_em
598	exit
599	fi
600	fi
601
602	##################
603	# 4. RUN WRF.EXE #
604	##################
605	if [ ${wrfstep} -eq 1 ]
606	then
607	echo '******************************'
608	echo '**** Step 4: Execute wrf.exe *'
609	echo '******************************'
610	cd ${simu_folder}
611	rm -rf ${simu_folder}/wrfout*
612	if [[ ${compilo} -eq 5 ]]
613	then
614	ulimit -s unlimited
615	fi
616	if [[ ${compilo} -eq 3 \|\| ${compilo} -eq 5 ]]
617	then
618	rm -rf ${simu_folder}/rsl.* 2> /dev/null
619	# ${WHERE_MPI}/mpirun -host smith -np ${numproc} wrf.exe < /dev/null &
620	nohup ${WHERE_MPI}/mpirun -np ${numproc} wrf.exe < /dev/null > log_wrf_mpirun &
621	else
622	rm -rf ${simu_folder}/log* 2> /dev/null
623	nohup wrf.exe > log_wrf &
624	fi
625	echo OK ! Simulation should be running now !
626	echo Check with the command: "ps -e -o '%u %p %C %x %c' \| grep wrf.exe"
627	echo '******************************'
628	echo '**** End.'
629
630	fi
631	xeyes &
632	exit
633
634
635

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