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runmeso @ 2613

Last change on this file since 2613 was 1288, checked in by aslmd, 11 years ago
MESOSCALE. adapted runmeso for free horiz grid with new physics. PLANETOPLOT. improved settings.
Property svn:executable set to ``*
File size: 22.5 KB

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1	#! /bin/bash
2
3	#########################################################
4	# runmeso : #
5	# utility to combine compilation + preprocessing + run #
6	#########################################################
7	###############################
8	# Author: A. Spiga #
9	# New version : December 2008 #
10	# Modified : 2009-2010 #
11	# New physics : 2011 #
12	###############################
13
14	# TODO: - GCM compile
15	# - NETCDF
16	# - (modif registry)
17	# - quick restart
18
19
20	###########################################
21	###########################################
22	###########################################
23
24
25	i_want_to_compile=1
26	scenario=""
27	#scenario="storm"
28
29	###########################################
30	###########################################
31
32	fresh=0
33	while getopts "f" options; do
34	case $options in
35	f ) fresh=1;;
36	esac
37	done
38
39	if [[ "${MESO}" = "" ]]
40	then
41	echo "Please initialize the variable MESO in your environnement (or modify scripts)"
42	exit
43	fi
44	####################################
45	# A FEW DEFINITIONS YOU CAN MODIFY #
46	####################################
47	main_folder=$MESO
48	meso_folder=${main_folder}'/LMD_MM_MARS'
49	calendar=${main_folder}'/LMD_MM_MARS/SIMU/calendar'
50	simu_folder=$PWD
51
52	################
53	# WELCOME USER #
54	################
55	echo '**********************************************'
56	echo '** LMD Martian Mesoscale Model launcher **'
57	echo '**********************************************'
58	echo '** User >>> '$(whoami)
59	echo '** Hostname >>> '$(hostname)
60	echo '** Hardware >>> '$(uname -m)
61	echo '** Processor >>> '$(uname -p)
62	echo '**********************************************'
63
64	######## NEWPHYS ???
65	if [[ ! ( -f "run.def" ) ]]
66	then
67	newphys=0
68	else
69	echo '** New LMD physics >>> YES [run.def is here]'
70	echo '**********************************************'
71	newphys=1
72	if [[ ! ("${scenario}" == "") ]]
73	then
74	echo '** Scenario >>>' ${scenario}
75	echo '**********************************************'
76	fi
77	fi
78
79	##########################
80	# GET INFO FROM NAMELIST #
81	##########################
82	#echo '***********************'
83	#echo '** Your settings **'
84	#echo '***********************'
85	echo '** Simulation directory >>> '${simu_folder}
86	if [[ ! ( -f "namelist.input" ) ]]
87	then
88	echo 'no namelist.input file !'
89	exit
90	fi
91	#
92	# READ INFO NEEDED FOR INIT
93	#
94	year=$(more ${simu_folder}/namelist.input \| grep start_year \| awk '{print $3}' \| sed s+','+''+g)
95	month=$(more ${simu_folder}/namelist.input \| grep start_month \| awk '{print $3}' \| sed s+','+''+g)
96	day=$(more ${simu_folder}/namelist.input \| grep start_day \| awk '{print $3}' \| sed s+','+''+g)
97	hour=$(more ${simu_folder}/namelist.input \| grep start_hour \| awk '{print $3}' \| sed s+','+''+g)
98	wrf_date=${year}'-'${month}'-'${day}'_00:00:00'
99	daygcm=$(more ${calendar} \| grep ${wrf_date} \| awk '{print $2}')
100	lsubs=$(more ${calendar} \| grep ${wrf_date} \| awk '{print $3}')
101	eyear=$(more ${simu_folder}/namelist.input \| grep end_year \| awk '{print $3}' \| sed s+','+''+g)
102	emonth=$(more ${simu_folder}/namelist.input \| grep end_month \| awk '{print $3}' \| sed s+','+''+g)
103	eday=$(more ${simu_folder}/namelist.input \| grep end_day \| awk '{print $3}' \| sed s+','+''+g)
104	ehour=$(more ${simu_folder}/namelist.input \| grep end_hour \| awk '{print $3}' \| sed s+','+''+g)
105	ewrf_date=${eyear}'-'${emonth}'-'${eday}'_00:00:00'
106	edaygcm=$(more ${calendar} \| grep ${ewrf_date} \| awk '{print $2}')
107	elsubs=$(more ${calendar} \| grep ${ewrf_date} \| awk '{print $3}')
108	echo '** Start date >>> '${year}'-'${month}'-'${day}" [sol="${daygcm}", Ls="${lsubs}"]"
109	echo '** End date >>> '${eyear}'-'${emonth}'-'${eday}" [sol="${edaygcm}", Ls="${elsubs}"]"
110	#
111	# READ INFO NEEDED FOR DOMAIN
112	#
113	interval_seconds="$(more ${simu_folder}/namelist.input \| grep -e '[^!]interval_seconds =')"
114	if [[ "${interval_seconds}" = "" ]]
115	then
116	interval_seconds="interval_seconds = 3700 !! (p2) Frequency of large-scale fields update (s)"
117	fi
118	#
119	max_dom="$(more ${simu_folder}/namelist.input \| grep -e '[^!]max_dom =')"
120	if [[ "${max_dom}" = "" ]]
121	then
122	max_dom="max_dom = 1 !! (r)(n)(p2) Total number of domains"
123	fi
124	#
125	parent_id="$(more ${simu_folder}/namelist.input \| grep -e '[^!]parent_id =')"
126	if [[ "${parent_id}" = "" ]]
127	then
128	parent_id="parent_id = 0, !! (n)(p2) Associated parent domain"
129	fi
130	#
131	i_parent_start="$(more ${simu_folder}/namelist.input \| grep -e '[^!]i_parent_start =')"
132	if [[ "${i_parent_start}" = "" ]]
133	then
134	i_parent_start="i_parent_start = 0, !! (n)(p2) x-position of the bottom-left nest corner"
135	fi
136	#
137	j_parent_start="$(more ${simu_folder}/namelist.input \| grep -e '[^!]j_parent_start =')"
138	if [[ "${j_parent_start}" = "" ]]
139	then
140	j_parent_start="j_parent_start = 0, !! (n)(p2) y-position of the bottom-left nest corner"
141	fi
142	#
143	parent_grid_ratio="$(more ${simu_folder}/namelist.input \| grep -e '[^!]parent_grid_ratio =')"
144	if [[ "${parent_grid_ratio}" = "" ]]
145	then
146	parent_grid_ratio="parent_grid_ratio = 1, !! (n)(p2) Ratio of horizontal resolution parent/nest"
147	fi
148	#
149	e_we="$(more ${simu_folder}/namelist.input \| grep -e '[^!]e_we =')"
150	e_sn="$(more ${simu_folder}/namelist.input \| grep -e '[^!]e_sn =')"
151	#
152	dx="$(more ${simu_folder}/namelist.input \| grep -e '[^!]dx =' \| awk '{print $3}' \| sed s+','+''+g)"
153	dy="$(more ${simu_folder}/namelist.input \| grep -e '[^!]dy =' \| awk '{print $3}' \| sed s+','+''+g)"
154
155	#
156	# READ INFO NEEDED FOR COMPILATION
157	#
158	nx=$(more ${simu_folder}/namelist.input \| grep -e '[^!]e_we =' \| awk '{print $3}' \| sed s+','+''+g)
159	ny=$(more ${simu_folder}/namelist.input \| grep -e '[^!]e_sn =' \| awk '{print $3}' \| sed s+','+''+g)
160	nz=$(more ${simu_folder}/namelist.input \| grep -e '[^!]e_vert =' \| awk '{print $3}' \| sed s+','+''+g)
161	nest=$(more ${simu_folder}/namelist.input \| grep -e '[^!]max_dom =' \| awk '{print $3}' \| sed s+','+''+g)
162	if [[ "${nest}" = "" ]]
163	then
164	nest='1'
165	fi
166	numcallphys=$(ls callphys*def \| wc -l)
167	if [[ ${numcallphys} -lt ${nest} ]]
168	then
169	echo '**********'
170	echo You should have ${nest} callphys.def' file(s)' !!
171	exit
172	fi
173	mars_scenario=$(more ${simu_folder}/namelist.input \| grep mars \| awk '{print $3}' \| sed s+','+''+g)
174
175	if [[ ${newphys} -eq 1 ]]
176	then
177	tracers='999'
178	nx='999'
179	ny='999'
180	nz='999'
181	else
182	case ${mars_scenario} in
183	0) tracers='1' ;;
184	1) tracers='2' ;;
185	2) tracers='1' ;;
186	3) tracers='2' ;;
187	10) tracers='1' ;;
188	11) tracers='4' ;;
189	12) tracers='6' ;;
190	42) tracers='18' ;;
191	*) tracers='1' ;;
192	esac
193	fi
194	echo '** Domain(s) >>> '${nest}
195	echo '** Tracer(s) >>> '${tracers}
196	echo '** Grid points >>> '${nx}" x "${ny}" x "${nz}
197	echo '** Horizontal resolution >>> '${dx}
198
199	###########
200	# ACTIONS #
201	###########
202	echo '**********************************************'
203	echo "** The runmeso script does it for you !"
204	echo '**********************************************'
205	echo "** Step 0: compile the model if not done yet"
206	echo "** Step 1: run GCM and prepare inputs"
207	echo "** Step 2: interpolate on domain horizontal grid"
208	echo "** Step 3: interpolate on chosen vertical levels"
209	echo "** Step 4: run the model"
210	echo "************************* Please make a choice"
211	echo " 1 --> Perform steps 0 1 2 3 4 [ -1: step 0 skipped]"
212	echo " 2 --> Perform steps 0 2 3 4 [ -2: step 0 skipped]"
213	echo " 3 --> Perform steps 0 3 4 [ -3: step 0 skipped]"
214	echo " 4 --> Perform steps 0 4 [ -4: step 0 skipped]"
215	echo "11 --> Perform steps 0 1 2 3 [-11: step 0 skipped]"
216	echo "12 --> Perform steps 0 2 3 [-12: step 0 skipped]"
217	echo "13 --> Perform steps 0 3 [-13: step 0 skipped]"
218	echo " 0 --> Perform step 0 only"
219	echo "99 --> Oops ! Exit now please."
220	echo '**********************************************'
221	echo "What is your choice? " ; read step
222	if [[ ${step} -lt 0 ]]
223	then
224	step=$(expr 0 - ${step})
225	i_want_to_compile=0
226	echo ".... ok, I skip the compiling & linking step. you'll just be asked the compiler you previously defined."
227	fi
228	case ${step} in
229	99) exit ;;
230	0) gcmstep=0 ; wpsstep=0 ; realstep=0 ; wrfstep=0 ;;
231	1) gcmstep=1 ; wpsstep=1 ; realstep=1 ; wrfstep=1 ;;
232	2) gcmstep=0 ; wpsstep=1 ; realstep=1 ; wrfstep=1 ;;
233	3) gcmstep=0 ; wpsstep=0 ; realstep=1 ; wrfstep=1 ;;
234	4) gcmstep=0 ; wpsstep=0 ; realstep=0 ; wrfstep=1 ;;
235	11) gcmstep=1 ; wpsstep=1 ; realstep=1 ; wrfstep=0 ;;
236	12) gcmstep=0 ; wpsstep=1 ; realstep=1 ; wrfstep=0 ;;
237	13) gcmstep=0 ; wpsstep=0 ; realstep=1 ; wrfstep=0 ;;
238	) echo "* I guess you do not know what to do. Let's start from the beginning."
239	gcmstep=1 ; wpsstep=1 ; realstep=1 ; wrfstep=1 ;;
240	esac
241
242
243	###################################
244	# LINK THE EXECUTABLES OR COMPILE #
245	###################################
246	echo '**********************************************'
247	echo "** Compiling option "
248	echo "** <1> pgf90"
249	echo "** <2> g95"
250	echo "** <3> mpi+pgf90"
251	echo "** <4> ifort"
252	echo "** <5> mpi+ifort"
253	echo "** .... more in makemeso ...."
254	echo '**********************************************'
255	echo "Your choice ? (1-5)" ; read compilo
256	if [[ "${compilo}" == "" \|\| ${compilo} -lt 1 \|\| ${compilo} -gt 5 ]]
257	then
258	echo "** well, let's try g95"
259	compilo=2
260	fi
261	if [[ ${newphys} -eq 0 ]]
262	then
263	if [[ ${compilo} -eq 3 \|\| ${compilo} -eq 5 ]]
264	then
265	echo How many processors ? e.g. 1, 2, 4, 6, 8, 12, 16, 20, 24, 32, 64, 128 ; read numproc
266	else
267	numproc=1
268	fi
269	else
270	numproc=999
271	fi
272	#if [[ ${i_want_to_compile} -ge 1 ]]
273	#then
274	cd ${meso_folder}
275	echo ${compilo} > tmp
276	if [[ ${compilo} -eq 3 ]]
277	then
278	echo ${numproc} >> tmp
279	fi
280	echo ${nest} >> tmp
281
282	if [[ ${newphys} -eq 0 ]]
283	then
284	./makemeso -d < tmp > /dev/null
285	else
286	if [[ "${scenario}" == "" ]]
287	then
288	./makemeso -d -p < tmp > /dev/null
289	else
290	./makemeso -d -p -s ${scenario} < tmp > /dev/null
291	fi
292	fi
293	\rm tmp 2> /dev/null
294	work_folder=${meso_folder}'/'$(more what_folder)
295	echo 'work_folder : '${work_folder}
296	\rm what_folder 2> /dev/null
297
298	##################### NB: define the domain if was not done yet
299	if [[ -f "${simu_folder}/namelist.wps" ]]
300	then
301	happy='y'
302	else
303	happy=''
304	fi
305	if [[ ${step} -eq 1 \|\| ${step} -eq 2 \|\| ${step} -eq 11 \|\| ${step} -eq 12 ]]
306	then
307	while [[ "${happy}" != "y" ]]
308	do
309	#vi ${simu_folder}/namelist.input
310	if [[ ! ( -d "${work_folder}/WPS" ) ]]
311	then
312	echo 'no WPS. you need to install it for your architecture'
313	exit
314	fi
315	\rm ${simu_folder}/namelist.wps 2> /dev/null
316	echo '**********************************************'
317	echo " !!! NO namelist.wps FILE FOUND !!!"
318	echo '**********************************************'
319	echo 'Please define the domain : '
320	echo " - 1/4 Projection: polar lambert mercator ? previous is "${proj} ; read proj
321	echo " - 2/4 Data source (multiple if nests): gcm 32ppd 64ppd 64ppd_noHRti 32ppd_HRalb ? previous is "${data_source} ; read data_source
322	echo " - 3/4 North Latitude of domain centre ? previous is "${lat} ; read lat
323	echo " - 4/4 East Longitude of domain centre ? previous is "${lon} ; read lon
324	#####
325	sed s+"__INTERVAL_SECONDS__"+"${interval_seconds}"+g ${meso_folder}/SIMU/namelist.wps.template \| sed s+"__MAX_DOM__"+"${max_dom}"+g \| sed s+"__PARENT_ID__"+"${parent_id}"+g \| sed s+"__PARENT_GRID_RATIO__"+"${parent_grid_ratio}"+g \| sed s+"__I_PARENT_START__"+"${i_parent_start}"+g \| sed s+"__J_PARENT_START__"+"${j_parent_start}"+g \| sed s+"__E_WE__"+"${e_we}"+g \| sed s+"__E_SN__"+"${e_sn}"+g \| sed s+"__DX__"+"${dx}"+g \| sed s+"__DY__"+"${dy}"+g \| sed s+"__PROJ__"+"${proj}"+g \| sed s+"__DATA_SOURCE__"+"${data_source}"+g \| sed s+"__LAT__"+"${lat}"+g \| sed s+"__LON__"+"${lon}"+g \| sed s+'0000-00-00_00:00:00'+${year}'-'${month}'-'${day}'_'${hour}':00:00'+g \| sed s+'1111-11-11_11:11:11'+${eyear}'-'${emonth}'-'${eday}'_'${ehour}':00:00'+g > ${simu_folder}/namelist.wps
326	####
327	if [[ ${nest} -gt 1 ]]
328	then
329	echo '**********************************************'
330	echo "USEFUL RULES for NESTS :"
331	echo "* parent_grid_ratio divides (e_we-s_we+1)"
332	echo "* nproc divides e_we-1"
333	echo "* nproc divides e_we-1"
334	fi
335	if [[ ${nest} -ge 4 ]]
336	then
337	echo more than 3 nests, not supported.
338	echo ...but not difficult to implement, cf. user manual.
339	exit
340	fi
341	####
342	ln -sf ${simu_folder}/namelist.wps ${work_folder}/WPS/namelist.wps
343	echo '**********************************************'
344	echo OK, thank you. Please wait... ncview will pop up soon !
345	cd ${work_folder}/WPS/
346	\rm geo_em.d0*.nc 2> /dev/null
347	./geogrid.exe #> /dev/null 2> /dev/null
348	ncview geo_em.d01.nc > /dev/null 2> /dev/null &
349	if [[ -f "geo_em.d02.nc" ]]
350	then
351	ncview geo_em.d02.nc > /dev/null 2> /dev/null &
352	fi
353	if [[ -f "geo_em.d03.nc" ]]
354	then
355	ncview geo_em.d03.nc > /dev/null 2> /dev/null &
356	fi
357	cd ${simu_folder}/
358	echo '**********************************************'
359	echo 'Are you happy with the results ? type y if yes, any key if no' ; read happy
360	done
361	fi
362	#####################
363	if [[ ${i_want_to_compile} -ge 1 ]]
364	then
365	cd ${simu_folder}
366	## corresponding executables
367	wrfexe=${work_folder}/wrf_x${nx}_y${ny}_z${nz}_d${nest}_t${tracers}_p${numproc}.exe
368	realexe=${work_folder}/real_x${nx}_y${ny}_z${nz}_d${nest}_t${tracers}_p${numproc}.exe
369	if [[ ${fresh} -eq 0 && -f ${wrfexe} ]]
370	then
371	echo '**********************************************'
372	echo " !!! wrf.exe exists in ${work_folder}"
373	echo '**********************************************'
374	echo "Recompile ? ('yes' to accept, any key to refuse)" ; read reply
375	else
376	reply='yes'
377	fi
378	echo '********************************************** OK thanks. Now please wait...'
379	echo ' '
380	if [[ "${reply}" == "yes" ]]
381	then
382	#####################
383	echo "** "Begin compilation process...
384	\rm ${wrfexe} 2> /dev/null
385	\rm ${realexe} 2> /dev/null
386	#
387	# CREATE makemeso_input
388	#
389	\rm ${simu_folder}/makemeso_input 2> /dev/null
390	touch ${simu_folder}/makemeso_input
391	echo ${compilo} >> ${simu_folder}/makemeso_input
392	if [[ ${newphys} -eq 0 ]]
393	then
394	if [[ "${compilo}" = "3" \|\| "${compilo}" = "5" ]]
395	then
396	echo ${numproc} >> ${simu_folder}/makemeso_input
397	fi
398	echo ${nx} >> ${simu_folder}/makemeso_input
399	echo ${ny} >> ${simu_folder}/makemeso_input
400	echo ${nz} >> ${simu_folder}/makemeso_input
401	fi
402	echo ${nest} >> ${simu_folder}/makemeso_input
403	if [[ ${newphys} -eq 0 ]]
404	then
405	echo ${tracers} >> ${simu_folder}/makemeso_input
406	fi
407	#
408	# COMPILE THE MODEL
409	#
410	cd ${meso_folder}
411	#if [[ "${changeregis}" = "1" ]]
412	#then
413	# cd ${work_folder}/WRFV2/Registry
414	# \rm Registry 2> /dev/null
415	# ./Registry.bash
416	# cd ../../..
417	#fi
418	if [[ ${fresh} -eq 0 ]]
419	then
420	##******
421	if [[ ${newphys} -eq 0 ]]
422	then
423	./makemeso -r < ${simu_folder}/makemeso_input
424	else
425	if [[ "${scenario}" == "" ]]
426	then
427	./makemeso -r -p < ${simu_folder}/makemeso_input
428	else
429	./makemeso -r -p -s ${scenario} < ${simu_folder}/makemeso_input
430	fi
431	fi
432	##******
433	else
434	##******
435	if [[ ${newphys} -eq 0 ]]
436	then
437	./makemeso -r -f < ${simu_folder}/makemeso_input
438	else
439	if [[ "${scenario}" == "" ]]
440	then
441	./makemeso -r -p -f < ${simu_folder}/makemeso_input
442	else
443	./makemeso -r -p -f -s ${scenario} < ${simu_folder}/makemeso_input
444	fi
445	fi
446	##******
447	fi
448
449	if [[ -f ${wrfexe} ]]
450	then
451	echo "** "seems OK ... linking executables
452	ln -sf ${wrfexe} ${simu_folder}/wrf.exe
453	ln -sf ${realexe} ${simu_folder}/real.exe
454	chmod a+x ${realexe} ${wrfexe} ## sait-on jamais
455	cd $simu_folder
456	else
457	echo no ${wrfexe}
458	echo problem with the compilation
459	exit
460	fi
461	else
462	#echo simply linking existing executables...
463	ln -sf ${wrfexe} ${simu_folder}/wrf.exe
464	ln -sf ${realexe} ${simu_folder}/real.exe
465	chmod a+x ${realexe} ${wrfexe} ## sait-on jamais
466	fi
467	fi
468
469	######################################
470	# 1. RUN GCM FOR INIT/BDY CONDITIONS #
471	######################################
472	if [ ${gcmstep} -eq 1 ]
473	then
474	echo '************************************'
475	echo '** Step 1: Prepare GCM inputs **'
476	echo '************************************'
477	#
478	# run GCM
479	#
480	if [[ ${newphys} -eq 0 ]]
481	then
482	cd ${main_folder}'/LMDZ.MARS/'
483	else
484	cd ${main_folder}'/LMDZ.MARS.new/'
485	fi
486	if [[ ! ( -f "gcm.e" ) ]]
487	then
488	echo "Oops. There is no gcm.e, you shall compile the GCM first."
489	exit
490	fi
491	cd myGCM
492	echo ${daygcm} \| ./launch_gcm
493	if [[ ! -d startbase ]]
494	then
495	echo "I guess I should stop here."
496	exit
497	fi
498	#
499	# prepare files for WPS
500	#
501	cd ${work_folder}
502	if [[ -f ${work_folder}/PREP_MARS/create_readmeteo.exe && -f ${work_folder}/PREP_MARS/readmeteo.exe ]]
503	then
504	### This is now generic so PREP_MARS could be moved out of DIRCOMPs files
505	cd ${work_folder}/PREP_MARS/
506	if [[ ${compilo} -eq 1 \|\| ${compilo} -eq 3 ]]
507	then
508	ln -sf compile_pgf compile
509	fi
510	if [[ ${compilo} -eq 2 ]]
511	then
512	ln -sf compile_g95 compile
513	fi
514	if [[ ${compilo} -eq 4 \|\| ${compilo} -eq 5 ]]
515	then
516	ln -sf compile_ifort compile
517	fi
518	if [[ ${compilo} -gt 5 ]]
519	then
520	echo "please adapt compile in PREP_MARS"
521	fi
522	./compile_and_exec
523	#echo 1 \| ./create_readmeteo.exe
524	#./readmeteo.exe < readmeteo.def
525	else
526	echo please compile the PREP_MARS utilities in ${work_folder}
527	exit
528	fi
529	fi
530
531	###################################
532	# 2. RUN WRF PREPROCESSING SYSTEM #
533	###################################
534	if [ ${wpsstep} -eq 1 ]
535	then
536	echo '*****************************************'
537	echo '**** Step 2: Perform WPS interpolations *'
538	echo '*****************************************'
539	if [[ -f ${work_folder}/WPS/geogrid.exe && -f ${work_folder}/WPS/metgrid.exe ]]
540	then
541	\rm -rf ${simu_folder}/met_em 2> /dev/null
542	mkdir ${simu_folder}/met_em
543	cd ${work_folder}/WPS/
544	\rm -rf ${work_folder}/WPS/WRFFEED/current 2> /dev/null
545	mkdir ${work_folder}/WPS/WRFFEED/current
546	ln -sf ${simu_folder}/namelist.wps ${work_folder}/WPS/namelist.wps
547	#mv namelist.wps namelist.wps.tmp
548	#sed s+'0000-00-00_00:00:00'+${year}'-'${month}'-'${day}'_'${hour}':00:00'+g namelist.wps.tmp \| sed s+'1111-11-11_11:11:11'+${eyear}'-'${emonth}'-'${eday}'_'${ehour}':00:00'+g > namelist.wps
549	./geogrid.exe
550	./metgrid.exe
551	#mv namelist.wps ${simu_folder}
552	#mv namelist.wps.tmp namelist.wps
553	namedata=$(date +simu_%d%h%Y_%H%M)
554	mv ${work_folder}/WPS/WRFFEED/current ${work_folder}'/WPS/WRFFEED/'${namedata}
555	echo met_em files in $namedata
556	cd ${simu_folder}/met_em
557	ln -sf ${work_folder}/WPS/WRFFEED/${namedata}/* .
558	cd ${simu_folder}
559	else
560	echo please compile the WPS utilities in ${work_folder}
561	exit
562	fi
563	fi
564
565	###################
566	# 3. RUN REAL.EXE #
567	###################
568	if [ ${realstep} -eq 1 ]
569	then
570	echo '*******************************'
571	echo '**** Step 3: Execute real.exe *'
572	echo '*******************************'
573	cd ${simu_folder}
574	if [[ ! -d met_em ]]
575	then
576	ls
577	echo "PB: no met_em files:"
578	echo "mkdir met_em folder then link met_em** files !"
579	exit
580	fi
581	cd ${simu_folder}/met_em
582	ln -sf ${simu_folder}/namelist.input .
583	ln -sf ${simu_folder}/real.exe .
584	ln -sf ${simu_folder}/levels .
585	rm -rf ${simu_folder}/met_em/wrfbdy* 2> /dev/null
586	rm -rf ${simu_folder}/met_em/wrfinput* 2> /dev/null
587	if [[ ${compilo} -eq 3 \|\| ${compilo} -eq 5 ]]
588	then
589	rm -rf ${simu_folder}/met_em/rsl.* 2> /dev/null
590	echo "check in "${simu_folder}"/met_em/rsl.out.0000"
591	./real.exe
592	tail -n 4 ${simu_folder}"/met_em/rsl.out.0000"
593	else
594	rm -rf ${simu_folder}/met_em/log* 2> /dev/null
595	echo "check in "${simu_folder}"/met_em/log_real"
596	real.exe > log_real
597	tail -n 4 ${simu_folder}"/met_em/log_real"
598	fi
599	if [[ -f ${simu_folder}/met_em/wrfinput_d01 && -f ${simu_folder}/met_em/wrfbdy_d01 ]]
600	then
601	echo ok... link ini and bdy conditions
602	cd ${simu_folder}
603	ln -sf ${simu_folder}/met_em/wrf_d0 .
604	else
605	echo mmm... there was a problem, see log files in met_em
606	exit
607	fi
608	fi
609
610	##################
611	# 4. RUN WRF.EXE #
612	##################
613	if [ ${wrfstep} -eq 1 ]
614	then
615	echo '******************************'
616	echo '**** Step 4: Execute wrf.exe *'
617	echo '******************************'
618	cd ${simu_folder}
619	rm -rf ${simu_folder}/wrfout*
620	if [[ ${compilo} -eq 5 ]]
621	then
622	ulimit -s unlimited
623	fi
624	if [[ ${compilo} -eq 3 \|\| ${compilo} -eq 5 ]]
625	then
626	rm -rf ${simu_folder}/rsl.* 2> /dev/null
627	# ${WHERE_MPI}/mpirun -host smith -np ${numproc} wrf.exe < /dev/null &
628	nohup ${WHERE_MPI}/mpirun -np ${numproc} wrf.exe < /dev/null > log_wrf_mpirun &
629	else
630	rm -rf ${simu_folder}/log* 2> /dev/null
631	nohup wrf.exe > log_wrf &
632	fi
633	echo OK ! Simulation should be running now !
634	echo Check with the command: "ps -e -o '%u %p %C %x %c' \| grep wrf.exe"
635	echo '******************************'
636	echo '**** End.'
637
638	fi
639	xeyes &
640	exit
641
642
643

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