[2877] | 1 | #!/bin/bash |
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| 2 | #SBATCH --partition=zen4 |
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[2901] | 3 | ##SBATCH --partition=zen16 |
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| 4 | ##SBATCH --ntasks=24 |
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| 5 | ##SBATCH --ntasks=4 |
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| 6 | #SBATCH --ntasks=1 |
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| 7 | #SBATCH --time=08:00:00 |
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| 8 | ##SBATCH --mem=6G |
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[1436] | 9 | |
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[2877] | 10 | # job information |
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| 11 | cat << EOF |
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| 12 | ------------------------------------------------------------------ |
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| 13 | Job submit on $SLURM_SUBMIT_HOST by $SLURM_JOB_USER |
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| 14 | JobID=$SLURM_JOBID Running_Node=$SLURM_NODELIST |
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| 15 | Node=$SLURM_JOB_NUM_NODES Task=$SLURM_NTASKS |
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| 16 | ------------------------------------------------------------------ |
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| 17 | EOF |
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| 18 | # Begin of section with executable commands |
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| 19 | |
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| 20 | |
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[2499] | 21 | ######################################################## |
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[2877] | 22 | ## standard run 121x121x61 nodes=1:ppn=4,mem=4gb,vmem=6gb |
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[2499] | 23 | ######################################################## |
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[2877] | 24 | ### large-domain run 321x321x61 (OK but slower) nodes=1:ppn=16,mem=16gb,vmem=24gb |
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[2499] | 25 | ######################################################## |
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[2877] | 26 | ### large-domain run 321x321x61 nodes=1:ppn=32,mem=32gb,vmem=48gb |
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[2499] | 27 | ######################################################## |
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[1434] | 28 | |
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[2877] | 29 | |
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| 30 | |
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| 31 | step=1 |
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[2901] | 32 | #step=4 |
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[2877] | 33 | fold=$PWD |
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| 34 | |
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[1434] | 35 | #### PREAMBLE |
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| 36 | ulimit -s unlimited |
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| 37 | |
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| 38 | #### STEP 1 |
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[1436] | 39 | if [[ ${step} -le 1 ]] ; then |
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[2877] | 40 | cd $fold/gcm |
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[1436] | 41 | # |
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[2499] | 42 | ./get_startday_from_namelist.sh | ./launch_gcm |
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[1436] | 43 | # |
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[2877] | 44 | if [[ $SLURM_NTASKS -gt 24 ]] ; then |
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[2499] | 45 | echo "--- Total CPU count is above 24" |
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| 46 | echo "--- For the standard GCM resolution, this is too much" |
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| 47 | echo "--- So we run the GCM only with 24 processors" |
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| 48 | $WHERE_MPI/mpirun -np 24 gcm.e > log_gcm |
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| 49 | else |
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| 50 | $WHERE_MPI/mpirun gcm.e > log_gcm |
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| 51 | fi |
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[1436] | 52 | # |
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[2877] | 53 | cd $fold/prep |
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[1436] | 54 | echo 1 | create_readmeteo.exe |
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| 55 | readmeteo.exe < readmeteo.def |
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| 56 | fi |
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[1434] | 57 | |
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[2877] | 58 | |
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[1436] | 59 | ##### STEP 2 |
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| 60 | if [[ ${step} -le 2 ]] ; then |
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[2877] | 61 | cd $fold/geogrid |
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[1439] | 62 | \rm geo_em.* |
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[1436] | 63 | geogrid.exe |
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| 64 | # |
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[2877] | 65 | cd $fold/metgrid |
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[1439] | 66 | \rm met_em.* |
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[1436] | 67 | metgrid.exe |
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| 68 | fi |
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[1434] | 69 | |
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[1436] | 70 | ##### STEP 3 |
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| 71 | if [[ ${step} -le 3 ]] ; then |
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[2877] | 72 | cd $fold/ |
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[1439] | 73 | \rm wrfi* wrfb* |
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[1436] | 74 | real.exe |
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| 75 | fi |
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[1434] | 76 | |
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[1436] | 77 | ##### STEP 4 |
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| 78 | if [[ ${step} -le 4 ]] ; then |
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[2877] | 79 | rm -rf $fold/run_$SLURM_JOBID |
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| 80 | mkdir $fold/run_$SLURM_JOBID |
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| 81 | mv rsl.error.0000 $fold/run_$SLURM_JOBID/real_rsl.error.0000 |
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| 82 | mv rsl.out.0000 $fold/run_$SLURM_JOBID/real_rsl.out.0000 |
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| 83 | cp -rfL $fold/*.def $fold/run_$SLURM_JOBID/ |
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| 84 | cp -rfL $fold/wrf.exe* $fold/run_$SLURM_JOBID/ |
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| 85 | cp -rfL $fold/namelist.input $fold/run_$SLURM_JOBID/ |
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| 86 | cp -rfL $fold/namelist.wps $fold/run_$SLURM_JOBID/ |
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| 87 | cp -rfL $fold/wrfi* $fold/run_$SLURM_JOBID/ |
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| 88 | cp -rfL $fold/wrfb* $fold/run_$SLURM_JOBID/ |
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| 89 | cd $fold/run_$SLURM_JOBID/ |
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| 90 | ln -sf $fold/data_physics ./ |
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[1552] | 91 | $WHERE_MPI/mpirun wrf.exe |
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[2493] | 92 | #gdb wrf.exe -ex=run |
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[1436] | 93 | fi |
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