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| 2 | MODULE tracer_h |
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| 3 | !! Stores data related to physics tracers. |
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| 4 | !! |
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| 5 | !! The module stores public global variables related to the number of tracers |
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| 6 | !! available in the physics and their kind: |
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| 7 | !! |
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| 8 | !! Currently, tracers can be used either for chemistry process (nchimi) or |
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| 9 | !! microphysics (nmicro). |
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| 10 | !! |
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| 11 | !! The subroutine "initracer2" initializes and performs sanity check of |
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| 12 | !! the tracer definitions given in traceur.def and the required tracers in physics |
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| 13 | !! (based on the run parameters). |
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| 14 | !! |
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| 15 | !! The module provides additional methods: |
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| 16 | !! |
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| 17 | !! - indexOfTracer : search for the index of a tracer in the global table (tracers_h:noms) by name. |
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| 18 | !! - nameOfTracer : get the name of tracer from a given index (of the global table). |
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| 19 | !! - dumpTracers : print the names of all tracers indexes given in argument. |
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| 20 | !! |
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| 21 | IMPLICIT NONE |
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| 22 | |
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| 23 | INTEGER, SAVE :: nqtot_p = 0 !! Total number of physical tracers |
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| 24 | INTEGER, SAVE :: nmicro = 0 !! Number of microphysics tracers. |
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| 25 | INTEGER, SAVE :: nice = 0 !! Number of microphysics ice tracers (subset of nmicro). |
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| 26 | INTEGER, SAVE :: nchimi = 0 !! Number of chemical (gaz species) tracers. |
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| 27 | !$OMP THREADPRIVATE(nqtot_p,nmicro,nice,nchimi) |
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| 28 | |
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| 29 | INTEGER, DIMENSION(:), ALLOCATABLE, SAVE :: chimi_indx !! Indexes of all chemical species tracers |
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| 30 | INTEGER, DIMENSION(:), ALLOCATABLE, SAVE :: micro_indx !! Indexes of all microphysical tracers |
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| 31 | INTEGER, DIMENSION(:), ALLOCATABLE, SAVE :: ices_indx !! Indexes of all ice microphysical tracers |
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| 32 | |
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| 33 | CHARACTER(len=20), DIMENSION(:), ALLOCATABLE, SAVE :: noms !! name of the tracer |
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| 34 | REAL, DIMENSION(:), ALLOCATABLE, SAVE :: mmol !! mole mass of tracer(g/mol-1) |
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| 35 | REAL, DIMENSION(:), ALLOCATABLE, SAVE :: rat_mmol !! molar mass ratio |
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| 36 | REAL, DIMENSION(:), ALLOCATABLE, SAVE :: rho_q !! tracer densities (kg.m-3) |
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| 37 | !$OMP THREADPRIVATE(noms,mmol,rat_mmol,rho_q) |
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| 38 | |
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| 39 | |
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| 40 | |
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| 41 | ! tracer indexes: these are initialized in initracer and should be 0 if the |
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| 42 | ! corresponding tracer does not exist |
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| 43 | |
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| 44 | |
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| 45 | CONTAINS |
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| 46 | |
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| 47 | SUBROUTINE initracer2(nq,nametrac,talk_to_me) |
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| 48 | !! Initialize tracer names and attributes. |
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| 49 | !! |
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| 50 | !! The method initializes the list of tracer names used in the physics from their |
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| 51 | !! dynamics counterpart. |
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| 52 | !! |
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| 53 | !! In addition, it initializes arrays of indexes for the different sub-processs of the physics: |
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| 54 | !! |
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| 55 | !! - tracers_h:micro_indxs, the array of tracers indexes used for the microphysics. |
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| 56 | !! - tracers_h:chimi_indxs, the array of tracers indexes used for the chemistry. |
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| 57 | !! |
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| 58 | !! The method also initializes the molar mass array (tracers_h:mmol) for the chemistry and the |
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| 59 | !! molar mass ratio (tracers_h:rat_mmol). |
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| 60 | !! |
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| 61 | !! @note |
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| 62 | !! Strict checking of chemical species name is performed here if the chemistry is activated |
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| 63 | !! (see callchim variable). All the values of 'cnames' must be found in the tracers names |
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| 64 | !! related to chemistry. |
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| 65 | !! @note |
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| 66 | !! Tests are more permissive for the microphysics and is only based on the mimimum number of |
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| 67 | !! tracers expected. Strict name checking is performed in inimufi. |
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| 68 | USE callkeys_mod |
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| 69 | USE comcstfi_mod, only: mugaz |
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| 70 | IMPLICIT NONE |
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| 71 | |
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| 72 | INTEGER, INTENT(in) :: nq !! Total number of tracers (fixed at compile time) |
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| 73 | character(len=20), DIMENSION(nq), INTENT(in) :: nametrac !! name of the tracer from dynamics (from 'traceurs.def') |
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| 74 | LOGICAL, INTENT(in), OPTIONAL :: talk_to_me !! Enable verbose mode. |
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| 75 | |
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| 76 | LOGICAL :: verb,found |
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| 77 | CHARACTER(len=20) :: str |
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| 78 | !! Hard-coded chemical species for Titan chemistry |
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| 79 | CHARACTER(len=10), DIMENSION(44), PARAMETER :: cnames = & |
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| 80 | (/"H ", "H2 ", "CH ", "CH2s ", "CH2 ", "CH3 ", & |
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| 81 | "CH4 ", "C2 ", "C2H ", "C2H2 ", "C2H3 ", "C2H4 ", & |
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| 82 | "C2H5 ", "C2H6 ", "C3H3 ", "C3H5 ", "C3H6 ", "C3H7 ", & |
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| 83 | "C4H ", "C4H3 ", "C4H4 ", "C4H2s ", "CH2CCH2 ", "CH3CCH ", & |
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| 84 | "C3H8 ", "C4H2 ", "C4H6 ", "C4H10 ", "AC6H6 ", "C3H2 ", & |
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| 85 | "C4H5 ", "AC6H5 ", "N2 ", "N4S ", "CN ", "HCN ", & |
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| 86 | "H2CN ", "CHCN ", "CH2CN ", "CH3CN ", "C3N ", "HC3N ", & |
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| 87 | "NCCN ", "C4N2 "/) |
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| 88 | !! Hard-coded chemical species molar mass (g.mol-1), shares the same indexing than cnames. |
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| 89 | REAL, DIMENSION(44), PARAMETER :: cmmol = (/ & |
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| 90 | 1.01 , 2.0158, 13.02, 14.03, 14.03, 15.03, 16.04 , 24.02, 25.03, 26.04 , 27.05 , & |
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| 91 | 28.05 , 29.06 , 30.07, 39.06, 41.07, 42.08, 43.09 , 49.05, 51.07, 52.08 , 50.06 , & |
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| 92 | 40.07 , 40.07 , 44.11, 50.06, 54.09, 58.13, 78.1136, 38.05, 53.07, 77.1136, 28.0134, & |
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| 93 | 14.01 , 26.02 , 27.04, 28.05, 39.05, 40.04, 41.05 , 50.04, 51.05, 52.04 , 76.1 /) |
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| 94 | |
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| 95 | INTEGER :: i,j,n |
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| 96 | |
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| 97 | verb = .true. ; IF (PRESENT(talk_to_me)) verb = talk_to_me |
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| 98 | |
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| 99 | ! nqtot_p could be used everywhere in the physic :) |
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| 100 | nqtot_p=nq |
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| 101 | |
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| 102 | IF (.NOT.ALLOCATED(noms)) ALLOCATE(noms(nq)) |
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| 103 | noms(:)=nametrac(:) |
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| 104 | |
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| 105 | IF (.NOT.ALLOCATED(rho_q)) ALLOCATE(rho_q(nq)) ! Defined for all tracers, currently initialized to 0.0 |
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| 106 | rho_q(:) = 0.0 |
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| 107 | |
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| 108 | ! Defined for all tracers, (actually) initialized only for chemical tracers |
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| 109 | IF (.NOT.ALLOCATED(mmol)) ALLOCATE(mmol(nq)) |
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| 110 | IF (.NOT.ALLOCATED(rat_mmol)) ALLOCATE(rat_mmol(nq)) |
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| 111 | mmol(:) = 0.0 |
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| 112 | rat_mmol(:) = 1.0 |
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| 113 | |
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| 114 | ! Compute number of microphysics tracers: |
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| 115 | ! By convention they all have the prefix "mu_" (case sensitive !) |
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| 116 | nmicro = 0 |
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| 117 | IF (callmufi) THEN |
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| 118 | DO i=1,nq |
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| 119 | str = noms(i) |
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| 120 | IF (str(1:3) == "mu_") nmicro = nmicro+1 |
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| 121 | ENDDO |
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| 122 | ! Checking the expected number of tracers: |
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| 123 | ! no cloud: 4 ; w cloud : 4 + 2 + (1+) |
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| 124 | ! Note that we do not make assumptions on the number of chemical species for clouds, this |
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| 125 | ! will be checked in inimufi. |
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| 126 | IF (callclouds) THEN |
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| 127 | IF (nmicro < 7) THEN |
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| 128 | WRITE(*,'((a),I3,(a))') "initracer2:error: Inconsistent number of microphysical tracers & |
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| 129 | &(expected at least 7 tracers,",nmicro," given)" |
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| 130 | CALL abort_gcm("initracer2", "inconsistent number of tracers", 42) |
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| 131 | STOP |
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| 132 | ENDIF |
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| 133 | ELSE IF (nmicro < 4) THEN |
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| 134 | WRITE(*,'((a),I3,(a))') "initracer2:error: Inconsistent number of microphysical tracers & |
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| 135 | &(expected at least 4 tracers,",nmicro," given)" |
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| 136 | CALL abort_gcm("initracer2", "inconsistent number of tracers", 42) |
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| 137 | ELSE IF (nmicro > 4) THEN |
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| 138 | WRITE(*,'(a)') "initracer2:info: I was expecting only four tracers, you gave me & |
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| 139 | &more. I'll just pretend nothing happen !" |
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| 140 | ENDIF |
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| 141 | ! microphysics indexes share the same values than original tracname. |
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| 142 | IF (.NOT.ALLOCATED(micro_indx)) ALLOCATE(micro_indx(nmicro)) |
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| 143 | j = 1 |
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| 144 | DO i=1,nq |
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| 145 | str = noms(i) |
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| 146 | IF (str(1:3) == "mu_") THEN |
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| 147 | micro_indx(j) = i |
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| 148 | j=j+1 |
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| 149 | ENDIF |
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| 150 | ENDDO |
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| 151 | ELSE |
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| 152 | IF (.NOT.ALLOCATED(micro_indx)) ALLOCATE(micro_indx(nmicro)) |
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| 153 | ENDIF |
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| 154 | |
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| 155 | ! Compute number of chemical species: |
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| 156 | ! simply assume that all other tracers ARE chemical species |
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| 157 | nchimi = nqtot_p - nmicro |
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| 158 | |
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| 159 | ! Titan chemistry requires exactly 44 tracers: |
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| 160 | ! Test should be in callchim condition |
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| 161 | |
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| 162 | IF (callchim) THEN |
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| 163 | IF (nchimi < SIZE(cnames)) THEN |
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| 164 | WRITE(*,*) "initracer2:error: Inconsistent number of chemical species given (",SIZE(cnames)," expected)" |
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| 165 | CALL abort_gcm("initracer2", "inconsistent number of tracers", 42) |
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| 166 | ENDIF |
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| 167 | IF (.NOT.ALLOCATED(chimi_indx)) ALLOCATE(chimi_indx(nchimi)) |
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| 168 | n = 0 ! counter on chimi_indx |
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| 169 | DO j=1,SIZE(cnames) |
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| 170 | found = .false. |
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| 171 | DO i=1,nq |
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| 172 | IF (TRIM(cnames(j)) == TRIM(noms(i))) THEN |
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| 173 | n = n + 1 |
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| 174 | chimi_indx(n) = i |
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| 175 | mmol(i) = cmmol(j) |
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| 176 | rat_mmol(i) = cmmol(j)/mugaz |
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| 177 | found = .true. |
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| 178 | EXIT |
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| 179 | ENDIF |
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| 180 | ENDDO |
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| 181 | IF (.NOT.found) THEN |
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| 182 | WRITE(*,*) "initracer2:error: "//TRIM(cnames(j))//" is missing from tracers definition file." |
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| 183 | ENDIF |
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| 184 | ENDDO |
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| 185 | IF (n < SIZE(cnames)) THEN |
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| 186 | WRITE(*,*) "initracer2:error: Inconsistent number of chemical species given (",SIZE(cnames)," expected)" |
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| 187 | CALL abort_gcm("initracer2", "inconsistent number of tracers", 42) |
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| 188 | ENDIF |
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| 189 | ELSE |
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| 190 | IF (.NOT.ALLOCATED(chimi_indx)) ALLOCATE(chimi_indx(0)) |
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| 191 | ENDIF |
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| 192 | IF (verb) THEN |
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| 193 | IF (callmufi.OR.callchim) WRITE(*,*) "===== INITRACER2 SPEAKING =====" |
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| 194 | IF (callmufi) THEN |
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| 195 | WRITE(*,*) "Found ",nmicro, "microphysical tracers" |
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| 196 | call dumpTracers(micro_indx) |
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| 197 | WRITE(*,*) "-------------------------------" |
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| 198 | ENDIF |
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| 199 | IF (callchim) THEN |
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| 200 | WRITE(*,*) "Found ",nchimi, "chemical tracers" |
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| 201 | call dumpTracers(chimi_indx) |
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| 202 | WRITE(*,*) "-------------------------------" |
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| 203 | ENDIF |
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| 204 | ENDIF |
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| 205 | |
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| 206 | END SUBROUTINE initracer2 |
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| 207 | |
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| 208 | FUNCTION indexOfTracer(name, sensitivity) RESULT(idx) |
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| 209 | !! Get the index of a tracer by name. |
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| 210 | !! |
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| 211 | !! The function searches in the global tracer table (tracer_h:noms) |
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| 212 | !! for the given name and returns the first index matching "name". |
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| 213 | !! |
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| 214 | !! If no name in the table matches the given one, -1 is returned ! |
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| 215 | !! |
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| 216 | !! @warning |
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| 217 | !! initracers must be called before any use of this function. |
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| 218 | IMPLICIT NONE |
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| 219 | CHARACTER(len=*), INTENT(in) :: name !! Name of the tracer to search. |
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| 220 | LOGICAL, OPTIONAL, INTENT(in) :: sensitivity !! Case sensitivity (true by default). |
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| 221 | INTEGER :: idx !! Index of the first tracer matching name or -1 if not found. |
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| 222 | LOGICAL :: zsens |
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| 223 | INTEGER :: j |
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| 224 | CHARACTER(len=LEN(name)) :: zname |
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| 225 | zsens = .true. ; IF(PRESENT(sensitivity)) zsens = sensitivity |
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| 226 | idx = -1 |
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| 227 | IF (.NOT.ALLOCATED(noms)) RETURN |
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| 228 | IF (zsens) THEN |
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| 229 | DO j=1,SIZE(noms) |
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| 230 | IF (TRIM(noms(j)) == TRIM(name)) THEN |
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| 231 | idx = j ; RETURN |
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| 232 | ENDIF |
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| 233 | ENDDO |
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| 234 | ELSE |
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| 235 | zname = to_lower(name) |
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| 236 | DO j=1,SIZE(noms) |
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| 237 | IF (TRIM(to_lower(noms(j))) == TRIM(zname)) THEN |
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| 238 | idx = j ; RETURN |
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| 239 | ENDIF |
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| 240 | ENDDO |
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| 241 | ENDIF |
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| 242 | |
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| 243 | CONTAINS |
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| 244 | |
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| 245 | FUNCTION to_lower(istr) RESULT(ostr) |
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| 246 | !! Lower case conversion function. |
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| 247 | IMPLICIT NONE |
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| 248 | CHARACTER(len=*), INTENT(in) :: istr |
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| 249 | CHARACTER(len=LEN(istr)) :: ostr |
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| 250 | INTEGER :: i, ic |
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| 251 | ostr = istr |
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| 252 | DO i = 1, LEN_TRIM(istr) |
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| 253 | ic = ICHAR(istr(i:i)) |
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| 254 | IF (ic >= 65 .AND. ic < 90) ostr(i:i) = char(ic + 32) |
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| 255 | ENDDO |
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| 256 | END FUNCTION to_lower |
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| 257 | END FUNCTION indexOfTracer |
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| 258 | |
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| 259 | FUNCTION nameOfTracer(indx) RESULT(name) |
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| 260 | !! Get the name of a tracer by index. |
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| 261 | !! |
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| 262 | !! The function searches in the global tracer table (tracer_h:noms) |
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| 263 | !! and returns the name of the tracer at given index. |
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| 264 | !! |
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| 265 | !! If the index is out of range an empty string is returned. |
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| 266 | !! |
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| 267 | !! @warning |
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| 268 | !! initracers must be called before any use of this function. |
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| 269 | IMPLICIT NONE |
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| 270 | INTEGER, INTENT(in) :: indx !! Index of the tracer name to retrieve. |
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| 271 | CHARACTER(len=20) :: name !! Name of the tracer at given index. |
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| 272 | name = '' |
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| 273 | IF (.NOT.ALLOCATED(noms)) RETURN |
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| 274 | IF (indx <= 0 .OR. indx > SIZE(noms)) RETURN |
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| 275 | name = noms(indx) |
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| 276 | END FUNCTION nameOfTracer |
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| 277 | |
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| 278 | SUBROUTINE dumpTracers(indexes) |
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| 279 | !! Print the names of the given list of tracers indexes. |
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| 280 | INTEGER, DIMENSION(:), INTENT(in) :: indexes |
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| 281 | INTEGER :: i,idx,nt |
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| 282 | CHARACTER(len=:), ALLOCATABLE :: suffix |
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| 283 | |
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| 284 | IF (.NOT.ALLOCATED(noms)) THEN |
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| 285 | WRITE(*,'(a)') "[tracers_h:dump_tracers] warning: 'noms' is not allocated, tracers_h:initracer2 has not be called yet" |
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| 286 | RETURN |
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| 287 | ENDIF |
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| 288 | nt = size(noms) |
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| 289 | WRITE(*,"(a)") "local -> global : name" |
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| 290 | DO i=1,size(indexes) |
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| 291 | idx = indexes(i) |
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| 292 | IF (idx < 1 .OR. idx > nt) THEN |
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| 293 | ! WRITE(*,'((a),I3,(a),I3,(a))') "index out of range (",idx,"/",nt,")" |
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| 294 | CYCLE |
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| 295 | ENDIF |
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| 296 | IF (ANY(chimi_indx == idx)) THEN |
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| 297 | suffix = ' (chimi)' |
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| 298 | ELSE IF (ANY(micro_indx == idx)) THEN |
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| 299 | suffix = ' (micro' |
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| 300 | IF (ALLOCATED(ices_indx)) THEN |
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| 301 | IF (ANY(ices_indx == idx)) suffix=suffix//", ice" |
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| 302 | ENDIF |
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| 303 | suffix=suffix//")" |
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| 304 | ELSE |
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| 305 | suffix=" ()" |
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| 306 | ENDIF |
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| 307 | WRITE(*,'(I5,(a),I6,(a))') i," -> ",idx ," : "//TRIM(noms(i))//suffix |
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| 308 | ENDDO |
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| 309 | END SUBROUTINE dumpTracers |
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| 310 | |
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| 311 | |
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| 312 | END MODULE tracer_h |
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| 313 | |
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