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physiq_mod.F90 @ 1862

Last change on this file since 1862 was 1844, checked in by jvatant, 7 years ago
Enable tracers input profiles in 1D --JVO
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1	module physiq_mod
2
3	implicit none
4
5	contains
6
7	subroutine physiq(ngrid,nlayer,nq, &
8	nametrac, &
9	firstcall,lastcall, &
10	pday,ptime,ptimestep, &
11	pplev,pplay,pphi, &
12	pu,pv,pt,pq, &
13	flxw, &
14	pdu,pdv,pdt,pdq,pdpsrf)
15
16	use radinc_h, only : L_NSPECTI,L_NSPECTV
17	use radcommon_h, only: sigma, glat, grav, BWNV
18	use surfdat_h, only: phisfi, zmea, zstd, zsig, zgam, zthe
19	use comdiurn_h, only: coslat, sinlat, coslon, sinlon
20	use comsaison_h, only: mu0, fract, dist_star, declin, right_ascen
21	use comsoil_h, only: nsoilmx, layer, mlayer, inertiedat
22	use datafile_mod, only: datadir, corrkdir, banddir
23	use geometry_mod, only: latitude, longitude, cell_area
24	USE comgeomfi_h, only: totarea, totarea_planet
25	USE tracer_h
26	use time_phylmdz_mod, only: ecritphy, iphysiq, nday
27	use phyetat0_mod, only: phyetat0
28	use phyredem, only: physdem0, physdem1
29	use planetwide_mod, only: planetwide_minval,planetwide_maxval,planetwide_sumval
30	use mod_phys_lmdz_para, only : is_master
31	use planete_mod, only: apoastr, periastr, year_day, peri_day, &
32	obliquit, nres, z0
33	use comcstfi_mod, only: pi, g, rcp, r, rad, mugaz, cpp
34	use time_phylmdz_mod, only: daysec
35	use logic_mod, only: moyzon_ch, moyzon_mu
36	use moyzon_mod, only: tmoy, playmoy, zphibar, zphisbar, zplevbar, &
37	zplaybar, zzlevbar, zzlaybar, ztfibar
38	use callkeys_mod
39	use vertical_layers_mod, only: presnivs, pseudoalt
40	use ioipsl_getin_p_mod, only: getin_p
41	#ifdef CPP_XIOS
42	use xios_output_mod, only: initialize_xios_output, &
43	update_xios_timestep, &
44	send_xios_field
45	#endif
46	implicit none
47
48
49	!==================================================================
50	!
51	! Purpose
52	! -------
53	! Central subroutine for all the physics parameterisations in the
54	! universal model. Originally adapted from the Mars LMDZ model.
55	!
56	! The model can be run without or with tracer transport
57	! depending on the value of "tracer" in file "callphys.def".
58	!
59	!
60	! It includes:
61	!
62	! I. Initialization :
63	! I.1 Firstcall initializations.
64	! I.2 Initialization for every call to physiq.
65	!
66	! II. Compute radiative transfer tendencies (longwave and shortwave) :
67	! II.a Option 1 : Call correlated-k radiative transfer scheme.
68	! II.b Option 2 : Call Newtonian cooling scheme.
69	! II.c Option 3 : Atmosphere has no radiative effect.
70	!
71	! III. Vertical diffusion (turbulent mixing) :
72	!
73	! IV. Dry Convective adjustment :
74	!
75	! V. Tracers
76	! V.1. Chemistry
77	! V.2. Microphysics
78	! V.3. Updates (pressure variations, surface budget).
79	! V.4. Surface Tracer Update.
80	!
81	! VI. Surface and sub-surface soil temperature.
82	!
83	! VII. Perform diagnostics and write output files.
84	!
85	!
86	! arguments
87	! ---------
88	!
89	! INPUT
90	! -----
91	!
92	! ngrid Size of the horizontal grid.
93	! nlayer Number of vertical layers.
94	! nq Number of advected fields.
95	! nametrac Name of corresponding advected fields.
96	!
97	! firstcall True at the first call.
98	! lastcall True at the last call.
99	!
100	! pday Number of days counted from the North. Spring equinoxe.
101	! ptime Universal time (0<ptime<1): ptime=0.5 at 12:00 UT.
102	! ptimestep timestep (s).
103	!
104	! pplay(ngrid,nlayer) Pressure at the middle of the layers (Pa).
105	! pplev(ngrid,nlayer+1) Intermediate pressure levels (Pa).
106	! pphi(ngrid,nlayer) Geopotential at the middle of the layers (m2.s-2).
107	!
108	! pu(ngrid,nlayer) u, zonal component of the wind (ms-1).
109	! pv(ngrid,nlayer) v, meridional component of the wind (ms-1).
110	!
111	! pt(ngrid,nlayer) Temperature (K).
112	!
113	! pq(ngrid,nlayer,nq) Advected fields.
114	!
115	! pudyn(ngrid,nlayer) \
116	! pvdyn(ngrid,nlayer) \ Dynamical temporal derivative for the
117	! ptdyn(ngrid,nlayer) / corresponding variables.
118	! pqdyn(ngrid,nlayer,nq) /
119	! flxw(ngrid,nlayer) vertical mass flux (kg/s) at layer lower boundary
120	!
121	! OUTPUT
122	! ------
123	!
124	! pdu(ngrid,nlayer) \
125	! pdv(ngrid,nlayer) \ Temporal derivative of the corresponding
126	! pdt(ngrid,nlayer) / variables due to physical processes.
127	! pdq(ngrid,nlayer) /
128	! pdpsrf(ngrid) /
129	!
130	!
131	! Authors
132	! -------
133	! Frederic Hourdin 15/10/93
134	! Francois Forget 1994
135	! Christophe Hourdin 02/1997
136	! Subroutine completely rewritten by F. Forget (01/2000)
137	! Water ice clouds: Franck Montmessin (update 06/2003)
138	! Radiatively active tracers: J.-B. Madeleine (10/2008-06/2009)
139	! New correlated-k radiative scheme: R. Wordsworth (2009)
140	! Many specifically Martian subroutines removed: R. Wordsworth (2009)
141	! Improved water cycle: R. Wordsworth / B. Charnay (2010)
142	! To F90: R. Wordsworth (2010)
143	! New turbulent diffusion scheme: J. Leconte (2012)
144	! Loops converted to F90 matrix format: J. Leconte (2012)
145	! No more ngridmx/nqmx, F90 commons and adaptation to parallel: A. Spiga (2012)
146	! Purge of the code : M. Turbet (2015)
147	! Fork for Titan : J. Vatant d'Ollone (2017)
148	! + clean of all too-generic (ocean, water, co2 ...) routines
149	! + Titan's chemistry
150	!============================================================================================
151
152
153	! 0. Declarations :
154	! ------------------
155
156	include "netcdf.inc"
157
158	! Arguments :
159	! -----------
160
161	! INPUTS:
162	! -------
163
164
165	integer,intent(in) :: ngrid ! Number of atmospheric columns.
166	integer,intent(in) :: nlayer ! Number of atmospheric layers.
167	integer,intent(in) :: nq ! Number of tracers.
168	character*20,intent(in) :: nametrac(nq) ! Names of the tracers taken from dynamics.
169
170	logical,intent(in) :: firstcall ! Signals first call to physics.
171	logical,intent(in) :: lastcall ! Signals last call to physics.
172
173	real,intent(in) :: pday ! Number of elapsed sols since reference Ls=0.
174	real,intent(in) :: ptime ! "Universal time", given as fraction of sol (e.g.: 0.5 for noon).
175	real,intent(in) :: ptimestep ! Physics timestep (s).
176	real,intent(in) :: pplev(ngrid,nlayer+1) ! Inter-layer pressure (Pa).
177	real,intent(in) :: pplay(ngrid,nlayer) ! Mid-layer pressure (Pa).
178	real,intent(in) :: pphi(ngrid,nlayer) ! Geopotential at mid-layer (m2s-2).
179	real,intent(in) :: pu(ngrid,nlayer) ! Zonal wind component (m/s).
180	real,intent(in) :: pv(ngrid,nlayer) ! Meridional wind component (m/s).
181	real,intent(in) :: pt(ngrid,nlayer) ! Temperature (K).
182	real,intent(in) :: pq(ngrid,nlayer,nq) ! Tracers (kg/kg_of_air).
183	real,intent(in) :: flxw(ngrid,nlayer) ! Vertical mass flux (ks/s) at lower boundary of layer
184
185	! OUTPUTS:
186	! --------
187
188	! Physical tendencies :
189
190	real,intent(out) :: pdu(ngrid,nlayer) ! Zonal wind tendencies (m/s/s).
191	real,intent(out) :: pdv(ngrid,nlayer) ! Meridional wind tendencies (m/s/s).
192	real,intent(out) :: pdt(ngrid,nlayer) ! Temperature tendencies (K/s).
193	real,intent(out) :: pdq(ngrid,nlayer,nq) ! Tracer tendencies (kg/kg_of_air/s).
194	real,intent(out) :: pdpsrf(ngrid) ! Surface pressure tendency (Pa/s).
195
196	! Local saved variables:
197	! ----------------------
198
199	integer,save :: day_ini ! Initial date of the run (sol since Ls=0).
200	integer,save :: icount ! Counter of calls to physiq during the run.
201	!$OMP THREADPRIVATE(day_ini,icount)
202
203	real, dimension(:),allocatable,save :: tsurf ! Surface temperature (K).
204	real, dimension(:,:),allocatable,save :: tsoil ! Sub-surface temperatures (K).
205	real, dimension(:,:),allocatable,save :: albedo ! Surface Spectral albedo. By MT2015.
206	real, dimension(:),allocatable,save :: albedo_equivalent ! Spectral Mean albedo.
207
208	!$OMP THREADPRIVATE(tsurf,tsoil,albedo,albedo_equivalent)
209
210	real,dimension(:),allocatable,save :: albedo_bareground ! Bare Ground Albedo. By MT 2015.
211
212	!$OMP THREADPRIVATE(albedo_bareground)
213
214	real,dimension(:),allocatable,save :: emis ! Thermal IR surface emissivity.
215	real,dimension(:,:),allocatable,save :: dtrad ! Net atmospheric radiative heating rate (K.s-1).
216	real,dimension(:),allocatable,save :: fluxrad_sky ! Radiative flux from sky absorbed by surface (W.m-2).
217	real,dimension(:),allocatable,save :: fluxrad ! Net radiative surface flux (W.m-2).
218	real,dimension(:),allocatable,save :: capcal ! Surface heat capacity (J m-2 K-1).
219	real,dimension(:),allocatable,save :: fluxgrd ! Surface conduction flux (W.m-2).
220	real,dimension(:,:),allocatable,save :: qsurf ! Tracer on surface (e.g. kg.m-2).
221	real,dimension(:,:),allocatable,save :: q2 ! Turbulent Kinetic Energy.
222
223	!$OMP THREADPRIVATE(emis,dtrad,fluxrad_sky,fluxrad,capcal,fluxgrd,qsurf,q2)
224
225
226	! Local variables :
227	! -----------------
228
229	real zh(ngrid,nlayer) ! Potential temperature (K).
230	real pw(ngrid,nlayer) ! Vertical velocity (m/s). (NOTE : >0 WHEN DOWNWARDS !!)
231
232	integer l,ig,ierr,iq,nw,isoil
233
234	! FOR DIAGNOSTIC :
235
236	real,dimension(:),allocatable,save :: fluxsurf_lw ! Incident Long Wave (IR) surface flux (W.m-2).
237	real,dimension(:),allocatable,save :: fluxsurf_sw ! Incident Short Wave (stellar) surface flux (W.m-2).
238	real,dimension(:),allocatable,save :: fluxsurfabs_sw ! Absorbed Short Wave (stellar) flux by the surface (W.m-2).
239	real,dimension(:),allocatable,save :: fluxtop_lw ! Outgoing LW (IR) flux to space (W.m-2).
240	real,dimension(:),allocatable,save :: fluxabs_sw ! Absorbed SW (stellar) flux (W.m-2).
241	real,dimension(:),allocatable,save :: fluxtop_dn ! Incoming SW (stellar) radiation at the top of the atmosphere (W.m-2).
242	real,dimension(:),allocatable,save :: fluxdyn ! Horizontal heat transport by dynamics (W.m-2).
243	real,dimension(:,:),allocatable,save :: OLR_nu ! Outgoing LW radiation in each band (Normalized to the band width (W/m2/cm-1)).
244	real,dimension(:,:),allocatable,save :: OSR_nu ! Outgoing SW radiation in each band (Normalized to the band width (W/m2/cm-1)).
245	real,dimension(:,:),allocatable,save :: zdtlw ! LW heating tendencies (K/s).
246	real,dimension(:,:),allocatable,save :: zdtsw ! SW heating tendencies (K/s).
247	real,dimension(:),allocatable,save :: sensibFlux ! Turbulent flux given by the atmosphere to the surface (W.m-2).
248
249	!$OMP THREADPRIVATE(fluxsurf_lw,fluxsurf_sw,fluxsurfabs_sw,fluxtop_lw,fluxabs_sw,fluxtop_dn,fluxdyn,OLR_nu,OSR_nu,&
250
251	!$OMP zdtlw,zdtsw,sensibFlux)
252
253	real zls ! Solar longitude (radians).
254	real zlss ! Sub solar point longitude (radians).
255	real zday ! Date (time since Ls=0, calculated in sols).
256	real zzlay(ngrid,nlayer) ! Altitude at the middle of the atmospheric layers.
257	real zzlev(ngrid,nlayer+1) ! Altitude at the atmospheric layer boundaries.
258
259	! TENDENCIES due to various processes :
260
261	! For Surface Temperature : (K/s)
262	real zdtsurf(ngrid) ! Cumulated tendencies.
263	real zdtsurfmr(ngrid) ! Mass_redistribution routine.
264	real zdtsdif(ngrid) ! Turbdiff/vdifc routines.
265
266	! For Atmospheric Temperatures : (K/s)
267	real zdtdif(ngrid,nlayer) ! Turbdiff/vdifc routines.
268	real zdtmr(ngrid,nlayer) ! Mass_redistribution routine.
269	real zdtsw1(ngrid,nlayer), zdtlw1(ngrid,nlayer) ! Callcorrk routine.
270
271	! For Surface Tracers : (kg/m2/s)
272	real dqsurf(ngrid,nq) ! Cumulated tendencies.
273	real zdqsdif(ngrid,nq) ! Turbdiff/vdifc routines.
274	real zdqsurfmr(ngrid,nq) ! Mass_redistribution routine.
275
276	! For Tracers : (kg/kg_of_air/s)
277	real zdqadj(ngrid,nlayer,nq) ! Convadj routine.
278	real zdqdif(ngrid,nlayer,nq) ! Turbdiff/vdifc routines.
279	real zdqevap(ngrid,nlayer) ! Turbdiff routine.
280	real zdqmr(ngrid,nlayer,nq) ! Mass_redistribution routine.
281
282	real zdqchi(ngrid,nlayer,nq) ! Chemical tendency ( chemistry routine ).
283	real zdqcond(ngrid,nlayer,nq) ! Condensation tendency ( chemistry routine ).
284
285	real zdqmufi(ngrid,nlayer,nq) ! Microphysical tendency.
286
287	! For Winds : (m/s/s)
288	real zdvadj(ngrid,nlayer),zduadj(ngrid,nlayer) ! Convadj routine.
289	real zdumr(ngrid,nlayer),zdvmr(ngrid,nlayer) ! Mass_redistribution routine.
290	real zdvdif(ngrid,nlayer),zdudif(ngrid,nlayer) ! Turbdiff/vdifc routines.
291	real zdhdif(ngrid,nlayer) ! Turbdiff/vdifc routines.
292	real zdhadj(ngrid,nlayer) ! Convadj routine.
293
294	! For Pressure and Mass :
295	real zdmassmr(ngrid,nlayer) ! Atmospheric Mass tendency for mass_redistribution (kg_of_air/m2/s).
296	real zdmassmr_col(ngrid) ! Atmospheric Column Mass tendency for mass_redistribution (kg_of_air/m2/s).
297	real zdpsrfmr(ngrid) ! Pressure tendency for mass_redistribution routine (Pa/s).
298
299
300
301	! Local variables for LOCAL CALCULATIONS:
302	! ---------------------------------------
303	real zflubid(ngrid)
304	real zplanck(ngrid),zpopsk(ngrid,nlayer)
305	real ztim1,ztim2,ztim3, z1,z2
306	real ztime_fin
307	real zdh(ngrid,nlayer)
308	real gmplanet
309	real taux(ngrid),tauy(ngrid)
310
311
312
313	! local variables for DIAGNOSTICS : (diagfi & stat)
314	! -------------------------------------------------
315	real ps(ngrid) ! Surface Pressure.
316	real zt(ngrid,nlayer) ! Atmospheric Temperature.
317	real zu(ngrid,nlayer),zv(ngrid,nlayer) ! Zonal and Meridional Winds.
318	real zq(ngrid,nlayer,nq) ! Atmospheric Tracers.
319	real zdtadj(ngrid,nlayer) ! Convadj Diagnostic.
320	real zdtdyn(ngrid,nlayer) ! Dynamical Heating (K/s).
321	real zdudyn(ngrid,nlayer) ! Dynamical Zonal Wind tendency (m.s-2).
322	real,allocatable,dimension(:,:),save :: ztprevious ! Previous loop Atmospheric Temperature (K) ! Useful for Dynamical Heating calculation.
323	real,allocatable,dimension(:,:),save :: zuprevious ! Previous loop Zonal Wind (m.s-1) ! Useful for Zonal Wind tendency calculation.
324	!$OMP THREADPRIVATE(ztprevious,zuprevious)
325
326	real vmr(ngrid,nlayer) ! volume mixing ratio
327	real time_phys
328
329	real ISR,ASR,OLR,GND,DYN,GSR,Ts1,Ts2,Ts3,TsS ! for Diagnostic.
330
331	! to test energy conservation (RW+JL)
332	real mass(ngrid,nlayer),massarea(ngrid,nlayer)
333	real dEtot, dEtots, AtmToSurf_TurbFlux
334	real,save :: dEtotSW, dEtotsSW, dEtotLW, dEtotsLW
335	!$OMP THREADPRIVATE(dEtotSW, dEtotsSW, dEtotLW, dEtotsLW)
336	real dEzRadsw(ngrid,nlayer),dEzRadlw(ngrid,nlayer),dEzdiff(ngrid,nlayer)
337	real dEdiffs(ngrid),dEdiff(ngrid)
338
339	!JL12 conservation test for mean flow kinetic energy has been disabled temporarily
340
341	real dItot, dItot_tmp, dVtot, dVtot_tmp
342
343	real dWtot, dWtot_tmp, dWtots, dWtots_tmp
344
345
346	! For Clear Sky Case.
347	real fluxsurf_lw1(ngrid), fluxsurf_sw1(ngrid), fluxsurfabs_sw1(ngrid) ! For SW/LW flux.
348	real fluxtop_lw1(ngrid), fluxabs_sw1(ngrid) ! For SW/LW flux.
349	real albedo_equivalent1(ngrid) ! For Equivalent albedo calculation.
350	real tf, ntf
351
352	real,allocatable,dimension(:,:),save :: qsurf_hist
353	!$OMP THREADPRIVATE(qsurf_hist)
354
355	! Miscellaneous :
356	character(len=10) :: tmp1
357	character(len=10) :: tmp2
358
359	! Local variables for Titan chemistry and microphysics (JVO 2017)
360	! ----------------------------------------------------------------------------
361
362	character*10,dimension(:),allocatable,save :: nomqy
363
364	!$OMP THREADPRIVATE(nomqy)
365
366	real ctimestep ! Chemistry timestep (s)
367
368	real temp_eq(nlayer), press_eq(nlayer) ! Moyennes planétaires
369
370	real , allocatable, dimension(:,:,:),save :: ychim
371
372	! 2D vmr tendencies ( chemistry and condensation ) for chem. tracers
373	real,dimension(:,:,:),allocatable,save :: dycchi ! Saved since chemistry is not called every step
374	real dyccond(ngrid,nlayer,nq)
375
376	real,dimension(:,:),allocatable,save :: qysat
377
378	!$OMP THREADPRIVATE(ychim,dycchi,qysat)
379
380	real,dimension(:),allocatable,save :: tankCH4 ! Depth of surface methane tank
381	!$OMP THREADPRIVATE(tankCH4)
382
383	!-----------------------------------------------------------------------------
384	! Interface to calmufi
385	! --> needed in order to pass assumed-shape arrays. Otherwise we must put calmufi in a module
386	! (to have an explicit generated by the compiler).
387	! Or one can put calmufi in MMP_GCM module (in muphytitan).
388	INTERFACE
389	SUBROUTINE calmufi(plev, zlev, play, zlay, temp, pq, zdq)
390	REAL(kind=8), DIMENSION(:,:), INTENT(IN) :: plev !! Pressure levels (Pa).
391	REAL(kind=8), DIMENSION(:,:), INTENT(IN) :: zlev !! Altitude levels (m).
392	REAL(kind=8), DIMENSION(:,:), INTENT(IN) :: play !! Pressure layers (Pa).
393	REAL(kind=8), DIMENSION(:,:), INTENT(IN) :: zlay !! Altitude at the center of each layer (m).
394	REAL(kind=8), DIMENSION(:,:), INTENT(IN) :: temp !! Temperature at the center of each layer (K).
395	REAL(kind=8), DIMENSION(:,:,:), INTENT(IN) :: pq !! Tracers ($kg.kg^{-1}}$).
396	REAL(kind=8), DIMENSION(:,:,:), INTENT(OUT) :: zdq !! Tendency for tracers ($kg.kg^{-1}}$).
397	END SUBROUTINE calmufi
398	END INTERFACE
399
400	!==================================================================================================
401
402	! -----------------
403	! I. INITIALISATION
404	! -----------------
405
406	! --------------------------------
407	! I.1 First Call Initialisation.
408	! --------------------------------
409	if (firstcall) then
410
411	! Initialisation of nmicro as well as tracers names, indexes ...
412	if (ngrid.ne.1) then
413	call initracer2(nq,nametrac) ! Already done in rcm1d
414	endif
415
416	! Allocate saved arrays.
417	ALLOCATE(tsurf(ngrid))
418	ALLOCATE(tsoil(ngrid,nsoilmx))
419	ALLOCATE(albedo(ngrid,L_NSPECTV))
420	ALLOCATE(albedo_equivalent(ngrid))
421	ALLOCATE(albedo_bareground(ngrid))
422	ALLOCATE(emis(ngrid))
423	ALLOCATE(dtrad(ngrid,nlayer))
424	ALLOCATE(fluxrad_sky(ngrid))
425	ALLOCATE(fluxrad(ngrid))
426	ALLOCATE(capcal(ngrid))
427	ALLOCATE(fluxgrd(ngrid))
428	ALLOCATE(qsurf(ngrid,nq))
429	ALLOCATE(q2(ngrid,nlayer+1))
430	ALLOCATE(tankCH4(ngrid))
431	ALLOCATE(ztprevious(ngrid,nlayer))
432	ALLOCATE(zuprevious(ngrid,nlayer))
433	ALLOCATE(qsurf_hist(ngrid,nq))
434	ALLOCATE(fluxsurf_lw(ngrid))
435	ALLOCATE(fluxsurf_sw(ngrid))
436	ALLOCATE(fluxsurfabs_sw(ngrid))
437	ALLOCATE(fluxtop_lw(ngrid))
438	ALLOCATE(fluxabs_sw(ngrid))
439	ALLOCATE(fluxtop_dn(ngrid))
440	ALLOCATE(fluxdyn(ngrid))
441	ALLOCATE(OLR_nu(ngrid,L_NSPECTI))
442	ALLOCATE(OSR_nu(ngrid,L_NSPECTV))
443	ALLOCATE(sensibFlux(ngrid))
444	ALLOCATE(zdtlw(ngrid,nlayer))
445	ALLOCATE(zdtsw(ngrid,nlayer))
446	ALLOCATE(dycchi(ngrid,nlayer,nq-nmicro))
447	ALLOCATE(qysat(nlayer,nq-nmicro))
448	ALLOCATE(nomqy(nq-nmicro+1)) ! +1 because of hv
449
450	! This is defined in comsaison_h
451	ALLOCATE(mu0(ngrid))
452	ALLOCATE(fract(ngrid))
453	! This is defined in radcommon_h
454	ALLOCATE(glat(ngrid))
455
456
457	! Variables set to 0
458	! ~~~~~~~~~~~~~~~~~~
459	dtrad(:,:) = 0.0
460	fluxrad(:) = 0.0
461	zdtsw(:,:) = 0.0
462	zdtlw(:,:) = 0.0
463
464	! Initialize setup for correlated-k radiative transfer
465	! JVO 17 : Was in callcorrk firstcall, but we need spectral intervals for microphysics
466	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
467
468	if (corrk) then
469
470	call system('rm -f surf_vals_long.out')
471
472	write( tmp1, '(i3)' ) L_NSPECTI
473	write( tmp2, '(i3)' ) L_NSPECTV
474	banddir=trim(adjustl(tmp1))//'x'//trim(adjustl(tmp2))
475	banddir=trim(adjustl(corrkdir))//'/'//trim(adjustl(banddir))
476
477	call setspi ! Basic infrared properties.
478	call setspv ! Basic visible properties.
479	call sugas_corrk ! Set up gaseous absorption properties.
480
481	OLR_nu(:,:) = 0.
482	OSR_nu(:,:) = 0.
483
484	endif
485
486	! Initialize names, timestep and saturation profiles for chemistry
487	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
488
489	if ( callchim .and. (nq.gt.nmicro) ) then
490
491	allocate(ychim(ngrid,nlayer,nq-nmicro))
492
493	ctimestep = ptimestep*REAL(ichim)
494
495	do iq=nmicro+1,nq
496	nomqy(iq-nmicro) = nametrac(iq)
497	enddo
498
499	nomqy(nq-nmicro+1) = "HV"
500
501	! qysat is taken at the equator ( small variations of t,p)
502	temp_eq(:) = tmoy(:)
503	press_eq(:) = playmoy(:)/100. ! en mbar
504
505	call inicondens(nq-nmicro,press_eq,temp_eq,nomqy,qysat)
506
507	zdqchi(:,:,:) = 0.0
508	zdqcond(:,:,:) = 0.0
509
510	endif
511
512	! Initialize microphysics.
513	! ~~~~~~~~~~~~~~~~~~~~~~~~
514
515	IF ( callmufi ) THEN
516
517	call inimufi(nq,ptimestep)
518
519	ENDIF
520
521
522	! Read 'startfi.nc' file.
523	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
524	call phyetat0(startphy_file,ngrid,nlayer,"startfi.nc",0,0,nsoilmx,nq, &
525	day_ini,time_phys,tsurf,tsoil,emis,q2,qsurf,tankCH4)
526	if (.not.startphy_file) then
527	! additionnal "academic" initialization of physics
528	if (is_master) write(,) "Physiq: initializing tsurf(:) to pt(:,1) !!"
529	tsurf(:)=pt(:,1)
530	if (is_master) write(,) "Physiq: initializing tsoil(:) to pt(:,1) !!"
531	do isoil=1,nsoilmx
532	tsoil(1:ngrid,isoil)=tsurf(1:ngrid)
533	enddo
534	if (is_master) write(,) "Physiq: initializing day_ini to pdat !"
535	day_ini=pday
536	endif
537
538	if (pday.ne.day_ini) then
539	write(,) "ERROR in physiq.F90:"
540	write(,) "bad synchronization between physics and dynamics"
541	write(,) "dynamics day: ",pday
542	write(,) "physics day: ",day_ini
543	stop
544	endif
545	write (,) 'In physiq day_ini =', day_ini
546
547	! Initialize albedo calculation.
548	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
549	albedo(:,:)=0.0
550	albedo_bareground(:)=0.0
551	call surfini(ngrid,nq,qsurf,albedo,albedo_bareground)
552
553	! Initialize orbital calculation.
554	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
555	call iniorbit(apoastr,periastr,year_day,peri_day,obliquit)
556
557	if(tlocked)then
558	print*,'Planet is tidally locked at resonance n=',nres
559	print*,'Make sure you have the right rotation rate!!!'
560	endif
561
562
563	! Initialize soil.
564	! ~~~~~~~~~~~~~~~~
565	if (callsoil) then
566
567	call soil(ngrid,nsoilmx,firstcall,lastcall,inertiedat, &
568	ptimestep,tsurf,tsoil,capcal,fluxgrd)
569
570	else ! else of 'callsoil'.
571
572	print*,'WARNING! Thermal conduction in the soil turned off'
573	capcal(:)=1.e6
574	fluxgrd(:)=intheat
575	print*,'Flux from ground = ',intheat,' W m^-2'
576
577	endif ! end of 'callsoil'.
578
579	icount=1
580
581
582	! Initialize surface history variable.
583	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
584	qsurf_hist(:,:)=qsurf(:,:)
585
586	! Initialize variable for dynamical heating and zonal wind tendency diagnostic
587	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
588	ztprevious(:,:)=pt(:,:)
589	zuprevious(:,:)=pu(:,:)
590
591
592	if(meanOLR)then
593	call system('rm -f rad_bal.out') ! to record global radiative balance.
594	call system('rm -f tem_bal.out') ! to record global mean/max/min temperatures.
595	call system('rm -f h2o_bal.out') ! to record global hydrological balance.
596	endif
597
598	if (ngrid.ne.1) then
599	! Note : no need to create a restart file in 1d.
600	call physdem0("restartfi.nc",longitude,latitude,nsoilmx,ngrid,nlayer,nq, &
601	ptimestep,pday+nday,time_phys,cell_area, &
602	albedo_bareground,inertiedat,zmea,zstd,zsig,zgam,zthe)
603
604	! Sanity check for microphysics - useless in 1D
605	if ( ((.not.moyzon_mu).and.(callmufi)) ) then
606	print *, "moyzon_mu=",moyzon_mu," and callmufi=",callmufi
607	print *, "Please activate zonal mean to run microphysics (for now) !"
608	stop
609	endif
610
611	! Sanity check for chemistry - useless in 1D
612	if ( (.not.moyzon_ch) .and. (callchim) ) then
613	print *, "moyzon_ch=",moyzon_ch," and callchim=",callchim
614	print *, "Please activate zonal mean to run chemistry !"
615	stop
616	endif
617
618	endif ! of ngrid.ne.1
619
620	! XIOS outputs
621	#ifdef CPP_XIOS
622
623	write(,) "physiq: call initialize_xios_output"
624	call initialize_xios_output(pday,ptime,ptimestep,daysec, &
625	presnivs,pseudoalt)
626	#endif
627	endif ! end of 'firstcall'
628
629	! ------------------------------------------------------
630	! I.2 Initializations done at every physical timestep:
631	! ------------------------------------------------------
632
633	#ifdef CPP_XIOS
634	! update XIOS time/calendar
635	call update_xios_timestep
636	#endif
637
638	! Initialize various variables
639	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
640
641	pdt(1:ngrid,1:nlayer) = 0.0
642	zdtsurf(1:ngrid) = 0.0
643	pdq(1:ngrid,1:nlayer,1:nq) = 0.0
644	dqsurf(1:ngrid,1:nq)= 0.0
645	pdu(1:ngrid,1:nlayer) = 0.0
646	pdv(1:ngrid,1:nlayer) = 0.0
647	pdpsrf(1:ngrid) = 0.0
648	zflubid(1:ngrid) = 0.0
649	taux(1:ngrid) = 0.0
650	tauy(1:ngrid) = 0.0
651
652	zday=pday+ptime ! Compute time, in sols (and fraction thereof).
653
654	! Compute Stellar Longitude (Ls), and orbital parameters.
655	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
656	if (season) then
657	call stellarlong(zday,zls)
658	else
659	call stellarlong(float(day_ini),zls)
660	end if
661
662	call orbite(zls,dist_star,declin,right_ascen)
663
664	if (tlocked) then
665	zlss=Mod(-(2.pi(zday/year_day)nres - right_ascen),2.pi)
666	elseif (diurnal) then
667	zlss=-2.pi(zday-.5)
668	else if(diurnal .eqv. .false.) then
669	zlss=9999.
670	endif
671
672
673	! Compute variations of g with latitude (oblate case).
674	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
675	if (oblate .eqv. .false.) then
676	glat(:) = g
677	else if (flatten .eq. 0.0 .or. J2 .eq. 0.0 .or. Rmean .eq. 0.0 .or. MassPlanet .eq. 0.0) then
678	print*,'I need values for flatten, J2, Rmean and MassPlanet to compute glat (else set oblate=.false.)'
679	call abort
680	else
681	gmplanet = MassPlanetgrav1e24
682	do ig=1,ngrid
683	glat(ig)= gmplanet/(Rmean*2) (1.D0 + 0.75 J2 - 2.0flatten/3. + (2.flatten - 15./4. J2) * cos(2. * (pi/2. - latitude(ig))))
684	end do
685	endif
686
687	! Compute geopotential between layers.
688	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
689	zzlay(1:ngrid,1:nlayer)=pphi(1:ngrid,1:nlayer)
690	do l=1,nlayer
691	zzlay(1:ngrid,l)= zzlay(1:ngrid,l)/glat(1:ngrid)
692	enddo
693
694	zzlev(1:ngrid,1)=0.
695	zzlev(1:ngrid,nlayer+1)=1.e7 ! Dummy top of last layer above 10000 km...
696
697	do l=2,nlayer
698	do ig=1,ngrid
699	z1=(pplay(ig,l-1)+pplev(ig,l))/(pplay(ig,l-1)-pplev(ig,l))
700	z2=(pplev(ig,l)+pplay(ig,l))/(pplev(ig,l)-pplay(ig,l))
701	zzlev(ig,l)=(z1zzlay(ig,l-1)+z2zzlay(ig,l))/(z1+z2)
702	enddo
703	enddo
704
705	! Zonal averages needed for chemistry and microphysics
706	! ~~~~~~~~~~~~~ Taken from old Titan ~~~~~~~~~~~~~~~~~
707	if (moyzon_ch .or. moyzon_mu) then
708
709	zzlaybar(1,:)=(zphibar(1,:)+zphisbar(1))/g
710	! SI ON TIENT COMPTE DE LA VARIATION DE G AVEC L'ALTITUDE:
711	! zzlaybar(1,:)=RGRARA/(RG*RA-(zphibar(1,:)+zphisbar(1)))-RA
712	zzlevbar(1,1)=zphisbar(1)/g
713	DO l=2,nlayer
714	z1=(zplaybar(1,l-1)+zplevbar(1,l))/(zplevbar(1,l-1)-zplevbar(1,l))
715	z2=(zplevbar(1,l) +zplaybar(1,l))/(zplevbar(1,l) -zplaybar(1,l))
716	zzlevbar(1,l)=(z1zzlaybar(1,l-1)+z2zzlaybar(1,l))/(z1+z2)
717	ENDDO
718	zzlevbar(1,nlayer+1)=zzlaybar(1,nlayer)+(zzlaybar(1,nlayer)-zzlevbar(1,nlayer))
719
720	DO ig=2,ngrid
721	if (latitude(ig).ne.latitude(ig-1)) then
722	DO l=1,nlayer
723	zzlaybar(ig,l)=(zphibar(ig,l)+zphisbar(ig))/g
724	! SI ON TIENT COMPTE DE LA VARIATION DE G AVEC L'ALTITUDE:
725	!zzlaybar(ig,l)=RGRARA/(RG*RA-(zphibar(ig,l)+zphisbar(ig)))-RA
726	ENDDO
727	zzlevbar(ig,1)=zphisbar(ig)/g
728	DO l=2,nlayer
729	z1=(zplaybar(ig,l-1)+zplevbar(ig,l))/ (zplevbar(ig,l-1)-zplevbar(ig,l))
730	z2=(zplevbar(ig,l) +zplaybar(ig,l))/(zplevbar(ig,l) -zplaybar(ig,l))
731	zzlevbar(ig,l)=(z1zzlaybar(ig,l-1)+z2zzlaybar(ig,l))/(z1+z2)
732	ENDDO
733	zzlevbar(ig,nlayer+1)=zzlaybar(ig,nlayer)+(zzlaybar(ig,nlayer)-zzlevbar(ig,nlayer))
734	else
735	zzlaybar(ig,:)=zzlaybar(ig-1,:)
736	zzlevbar(ig,:)=zzlevbar(ig-1,:)
737	endif
738	ENDDO
739
740	endif ! moyzon
741
742	! -------------------------------------------------------------------------------------
743	! Compute potential temperature
744	! Note : Potential temperature calculation may not be the same in physiq and dynamic...
745	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
746	do l=1,nlayer
747	do ig=1,ngrid
748	zpopsk(ig,l)=(pplay(ig,l)/pplev(ig,1))**rcp
749	zh(ig,l)=pt(ig,l)/zpopsk(ig,l)
750	mass(ig,l) = (pplev(ig,l) - pplev(ig,l+1))/glat(ig)
751	massarea(ig,l)=mass(ig,l)*cell_area(ig)
752	enddo
753	enddo
754
755	! Compute vertical velocity (m/s) from vertical mass flux
756	! w = F / (rhoarea) and rho = P/(rT)
757	! But first linearly interpolate mass flux to mid-layers
758	do l=1,nlayer-1
759	pw(1:ngrid,l)=0.5*(flxw(1:ngrid,l)+flxw(1:ngrid,l+1))
760	enddo
761	pw(1:ngrid,nlayer)=0.5*flxw(1:ngrid,nlayer) ! since flxw(nlayer+1)=0
762	do l=1,nlayer
763	pw(1:ngrid,l)=(pw(1:ngrid,l)rpt(1:ngrid,l)) / &
764	(pplay(1:ngrid,l)*cell_area(1:ngrid))
765	enddo
766
767	!---------------------------------
768	! II. Compute radiative tendencies
769	!---------------------------------
770
771	if (callrad) then
772	if( mod(icount-1,iradia).eq.0.or.lastcall) then
773
774	! Compute local stellar zenith angles
775	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
776	if (tlocked) then
777	! JL14 corrects tidally resonant (and inclined) cases. nres=omega_rot/omega_orb
778	ztim1=SIN(declin)
779	ztim2=COS(declin)*COS(zlss)
780	ztim3=COS(declin)*SIN(zlss)
781
782	call stelang(ngrid,sinlon,coslon,sinlat,coslat, &
783	ztim1,ztim2,ztim3,mu0,fract, flatten)
784
785	elseif (diurnal) then
786	ztim1=SIN(declin)
787	ztim2=COS(declin)COS(2.pi*(zday-.5))
788	ztim3=-COS(declin)SIN(2.pi*(zday-.5))
789
790	call stelang(ngrid,sinlon,coslon,sinlat,coslat, &
791	ztim1,ztim2,ztim3,mu0,fract, flatten)
792	else if(diurnal .eqv. .false.) then
793
794	call mucorr(ngrid,declin,latitude,mu0,fract,10000.,rad,flatten)
795	! WARNING: this function appears not to work in 1D
796
797	endif
798
799	! Eclipse incoming sunlight (e.g. Saturn ring shadowing).
800	if(rings_shadow) then
801	call call_rings(ngrid, ptime, pday, diurnal)
802	endif
803
804
805	if (corrk) then
806
807	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
808	! II.a Call correlated-k radiative transfer scheme
809	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
810
811	call call_profilgases(nlayer)
812
813	! standard callcorrk
814	call callcorrk(ngrid,nlayer,pq,nq,qsurf, &
815	albedo,albedo_equivalent,emis,mu0,pplev,pplay,pt, &
816	tsurf,fract,dist_star, &
817	zdtlw,zdtsw,fluxsurf_lw,fluxsurf_sw, &
818	fluxsurfabs_sw,fluxtop_lw, &
819	fluxabs_sw,fluxtop_dn,OLR_nu,OSR_nu, &
820	lastcall)
821
822	! Radiative flux from the sky absorbed by the surface (W.m-2).
823	GSR=0.0
824	fluxrad_sky(1:ngrid)=emis(1:ngrid)*fluxsurf_lw(1:ngrid)+fluxsurfabs_sw(1:ngrid)
825
826	!if(noradsurf)then ! no lower surface; SW flux just disappears
827	! GSR = SUM(fluxsurf_sw(1:ngrid)*cell_area(1:ngrid))/totarea
828	! fluxrad_sky(1:ngrid)=emis(1:ngrid)*fluxsurf_lw(1:ngrid)
829	! print*,'SW lost in deep atmosphere = ',GSR,' W m^-2'
830	!endif
831
832	! Net atmospheric radiative heating rate (K.s-1)
833	dtrad(1:ngrid,1:nlayer)=zdtsw(1:ngrid,1:nlayer)+zdtlw(1:ngrid,1:nlayer)
834
835	elseif(newtonian)then
836
837	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
838	! II.b Call Newtonian cooling scheme
839	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
840	call newtrelax(ngrid,nlayer,mu0,sinlat,zpopsk,pt,pplay,pplev,dtrad,firstcall)
841
842	zdtsurf(1:ngrid) = +(pt(1:ngrid,1)-tsurf(1:ngrid))/ptimestep
843	! e.g. surface becomes proxy for 1st atmospheric layer ?
844
845	else
846
847	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
848	! II.c Atmosphere has no radiative effect
849	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
850	fluxtop_dn(1:ngrid) = fract(1:ngrid)mu0(1:ngrid)Fat1AU/dist_star**2
851	if(ngrid.eq.1)then ! / by 4 globally in 1D case...
852	fluxtop_dn(1) = fract(1)Fat1AU/dist_star*2/2.0
853	endif
854	fluxsurf_sw(1:ngrid) = fluxtop_dn(1:ngrid)
855	print*,'------------WARNING---WARNING------------' ! by MT2015.
856	print*,'You are in corrk=false mode, '
857	print*,'and the surface albedo is taken equal to the first visible spectral value'
858
859	fluxsurfabs_sw(1:ngrid) = fluxtop_dn(1:ngrid)*(1.-albedo(1:ngrid,1))
860	fluxrad_sky(1:ngrid) = fluxsurfabs_sw(1:ngrid)
861	fluxtop_lw(1:ngrid) = emis(1:ngrid)sigmatsurf(1:ngrid)**4
862
863	dtrad(1:ngrid,1:nlayer)=0.0 ! no atmospheric radiative heating
864
865	endif ! end of corrk
866
867	endif ! of if(mod(icount-1,iradia).eq.0)
868
869
870	! Transformation of the radiative tendencies
871	! ------------------------------------------
872	zplanck(1:ngrid)=tsurf(1:ngrid)*tsurf(1:ngrid)
873	zplanck(1:ngrid)=emis(1:ngrid)sigmazplanck(1:ngrid)*zplanck(1:ngrid)
874	fluxrad(1:ngrid)=fluxrad_sky(1:ngrid)-zplanck(1:ngrid)
875	pdt(1:ngrid,1:nlayer)=pdt(1:ngrid,1:nlayer)+dtrad(1:ngrid,1:nlayer)
876
877	! Test of energy conservation
878	!----------------------------
879	if(enertest)then
880	call planetwide_sumval(cppmassarea(:,:)zdtsw(:,:)/totarea_planet,dEtotSW)
881	call planetwide_sumval(cppmassarea(:,:)zdtlw(:,:)/totarea_planet,dEtotLW)
882	!call planetwide_sumval(fluxsurf_sw(:)(1.-albedo_equivalent(:))cell_area(:)/totarea_planet,dEtotsSW) !JL13 carefull, albedo can have changed since the last time we called corrk
883	call planetwide_sumval(fluxsurfabs_sw(:)*cell_area(:)/totarea_planet,dEtotsSW) !JL13 carefull, albedo can have changed since the last time we called corrk
884	call planetwide_sumval((fluxsurf_lw(:)emis(:)-zplanck(:))cell_area(:)/totarea_planet,dEtotsLW)
885	dEzRadsw(:,:)=cppmass(:,:)zdtsw(:,:)
886	dEzRadlw(:,:)=cppmass(:,:)zdtlw(:,:)
887	if (is_master) then
888	print*,'---------------------------------------------------------------'
889	print*,'In corrk SW atmospheric heating =',dEtotSW,' W m-2'
890	print*,'In corrk LW atmospheric heating =',dEtotLW,' W m-2'
891	print*,'atmospheric net rad heating (SW+LW) =',dEtotLW+dEtotSW,' W m-2'
892	print*,'In corrk SW surface heating =',dEtotsSW,' W m-2'
893	print*,'In corrk LW surface heating =',dEtotsLW,' W m-2'
894	print*,'surface net rad heating (SW+LW) =',dEtotsLW+dEtotsSW,' W m-2'
895	endif
896	endif ! end of 'enertest'
897
898	endif ! of if (callrad)
899
900
901
902	! --------------------------------------------
903	! III. Vertical diffusion (turbulent mixing) :
904	! --------------------------------------------
905
906	if (calldifv) then
907
908	zflubid(1:ngrid)=fluxrad(1:ngrid)+fluxgrd(1:ngrid)
909
910	! JL12 the following if test is temporarily there to allow us to compare the old vdifc with turbdiff.
911	if (UseTurbDiff) then
912
913	call turbdiff(ngrid,nlayer,nq, &
914	ptimestep,capcal,lwrite, &
915	pplay,pplev,zzlay,zzlev,z0, &
916	pu,pv,pt,zpopsk,pq,tsurf,emis,qsurf, &
917	pdt,pdq,zflubid, &
918	zdudif,zdvdif,zdtdif,zdtsdif, &
919	sensibFlux,q2,zdqdif,zdqsdif, &
920	taux,tauy,lastcall)
921
922	else
923
924	zdh(1:ngrid,1:nlayer)=pdt(1:ngrid,1:nlayer)/zpopsk(1:ngrid,1:nlayer)
925
926	call vdifc(ngrid,nlayer,nq,zpopsk, &
927	ptimestep,capcal,lwrite, &
928	pplay,pplev,zzlay,zzlev,z0, &
929	pu,pv,zh,pq,tsurf,emis,qsurf, &
930	zdh,pdq,zflubid, &
931	zdudif,zdvdif,zdhdif,zdtsdif, &
932	sensibFlux,q2,zdqdif,zdqsdif, &
933	taux,tauy,lastcall)
934
935	zdtdif(1:ngrid,1:nlayer)=zdhdif(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer) ! for diagnostic only
936	zdqevap(1:ngrid,1:nlayer)=0.
937
938	end if !end of 'UseTurbDiff'
939
940
941	pdv(1:ngrid,1:nlayer)=pdv(1:ngrid,1:nlayer)+zdvdif(1:ngrid,1:nlayer)
942	pdu(1:ngrid,1:nlayer)=pdu(1:ngrid,1:nlayer)+zdudif(1:ngrid,1:nlayer)
943	pdt(1:ngrid,1:nlayer)=pdt(1:ngrid,1:nlayer)+zdtdif(1:ngrid,1:nlayer)
944	zdtsurf(1:ngrid)=zdtsurf(1:ngrid)+zdtsdif(1:ngrid)
945
946	if (tracer) then
947	pdq(1:ngrid,1:nlayer,1:nq)=pdq(1:ngrid,1:nlayer,1:nq)+ zdqdif(1:ngrid,1:nlayer,1:nq)
948	dqsurf(1:ngrid,1:nq)=dqsurf(1:ngrid,1:nq) + zdqsdif(1:ngrid,1:nq)
949	end if ! of if (tracer)
950
951
952	! test energy conservation
953	!-------------------------
954	if(enertest)then
955
956	dEzdiff(:,:)=cppmass(:,:)zdtdif(:,:)
957	do ig = 1, ngrid
958	dEdiff(ig)=SUM(dEzdiff (ig,:))+ sensibFlux(ig)! subtract flux to the ground
959	dEzdiff(ig,1)= dEzdiff(ig,1)+ sensibFlux(ig)! subtract flux to the ground
960	enddo
961
962	call planetwide_sumval(dEdiff(:)*cell_area(:)/totarea_planet,dEtot)
963	dEdiffs(:)=capcal(:)*zdtsdif(:)-zflubid(:)-sensibFlux(:)
964	call planetwide_sumval(dEdiffs(:)*cell_area(:)/totarea_planet,dEtots)
965	call planetwide_sumval(sensibFlux(:)*cell_area(:)/totarea_planet,AtmToSurf_TurbFlux)
966
967	if (is_master) then
968
969	if (UseTurbDiff) then
970	print*,'In TurbDiff sensible flux (atm=>surf) =',AtmToSurf_TurbFlux,' W m-2'
971	print*,'In TurbDiff non-cons atm nrj change =',dEtot,' W m-2'
972	print*,'In TurbDiff (correc rad+latent heat) surf nrj change =',dEtots,' W m-2'
973	else
974	print*,'In vdifc sensible flux (atm=>surf) =',AtmToSurf_TurbFlux,' W m-2'
975	print*,'In vdifc non-cons atm nrj change =',dEtot,' W m-2'
976	print*,'In vdifc (correc rad+latent heat) surf nrj change =',dEtots,' W m-2'
977	end if
978	endif ! end of 'is_master'
979
980	! JL12 : note that the black body radiative flux emitted by the surface has been updated by the implicit scheme but not given back elsewhere.
981	endif ! end of 'enertest'
982
983	else ! calldifv
984
985	if(.not.newtonian)then
986
987	zdtsurf(1:ngrid) = zdtsurf(1:ngrid) + (fluxrad(1:ngrid) + fluxgrd(1:ngrid))/capcal(1:ngrid)
988
989	endif
990
991	endif ! end of 'calldifv'
992
993
994	!----------------------------------
995	! IV. Dry convective adjustment :
996	!----------------------------------
997
998	if(calladj) then
999
1000	zdh(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer)/zpopsk(1:ngrid,1:nlayer)
1001	zduadj(1:ngrid,1:nlayer)=0.0
1002	zdvadj(1:ngrid,1:nlayer)=0.0
1003	zdhadj(1:ngrid,1:nlayer)=0.0
1004
1005
1006	call convadj(ngrid,nlayer,nq,ptimestep, &
1007	pplay,pplev,zpopsk, &
1008	pu,pv,zh,pq, &
1009	pdu,pdv,zdh,pdq, &
1010	zduadj,zdvadj,zdhadj, &
1011	zdqadj)
1012
1013	pdu(1:ngrid,1:nlayer) = pdu(1:ngrid,1:nlayer) + zduadj(1:ngrid,1:nlayer)
1014	pdv(1:ngrid,1:nlayer) = pdv(1:ngrid,1:nlayer) + zdvadj(1:ngrid,1:nlayer)
1015	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer) + zdhadj(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer)
1016	zdtadj(1:ngrid,1:nlayer) = zdhadj(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer) ! for diagnostic only
1017
1018	if(tracer) then
1019	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + zdqadj(1:ngrid,1:nlayer,1:nq)
1020	end if
1021
1022	! Test energy conservation
1023	if(enertest)then
1024	call planetwide_sumval(cppmassarea(:,:)zdtadj(:,:)/totarea_planet,dEtot)
1025	if (is_master) print*,'In convadj atmospheric energy change =',dEtot,' W m-2'
1026	endif
1027
1028
1029	endif ! end of 'calladj'
1030
1031
1032	!---------------------------------------------
1033	! V. Specific parameterizations for tracers
1034	!---------------------------------------------
1035
1036	if (tracer) then
1037
1038	! -------------------------
1039	! V.1. Chemistry
1040	! -------------------------
1041
1042	if (callchim) then
1043
1044	if (nq.gt.nmicro) then
1045	do iq = nmicro+1,nq
1046	ychim(:,:,iq-nmicro) = pq(:,:,iq) * rat_mmol(iq) ! convert to molar fraction
1047	enddo
1048	endif
1049
1050	! Condensation tendency after the transport
1051	do iq=nmicro+1,nq
1052	do l=1,nlayer
1053	do ig=1,ngrid
1054	if ( ychim(ig,l,iq-nmicro).gt.qysat(l,iq-nmicro) ) then
1055	dyccond(ig,l,iq)= ( -ychim(ig,l,iq-nmicro)+qysat(l,iq-nmicro) ) / ptimestep
1056	endif
1057	enddo
1058	enddo
1059	enddo
1060
1061	if ( callclouds ) dyccond(:,:,ices_indx) = 0.0 ! Condensation will be calculated in the cloud microphysics
1062
1063	if( mod(icount-1,ichim).eq.0. ) then
1064
1065	print *, "We enter in the chemistry ..."
1066
1067	if (ngrid.eq.1) then ! We obviously don't have access to (and don't need) zonal means in 1D
1068	call calchim(ngrid,nq-nmicro,ychim,nomqy,declin,zls,ctimestep, &
1069	pt,pplay,pplev,zzlay,zzlev,dycchi,nlayer+70)
1070	else
1071	call calchim(ngrid,nq-nmicro,ychim,nomqy,declin,zls,ctimestep, &
1072	ztfibar,zplaybar,zplevbar,zzlaybar,zzlevbar,dycchi,nlayer+70)
1073	! JVO 2017 : NLEV = nlayer+70, en accord avec le C. Quid si nlay=/ 55 ?
1074	endif
1075
1076	endif
1077
1078	! TEMPORARY COMMENT
1079	! These conversions as well as 2D/1D should be put in phytrac
1080	! ( GCM-friendly tracers and tendencies -> format for photochem and microphys )
1081
1082	if (nq.gt.nmicro) then
1083	! We convert tendencies to mass mixing ratio
1084	do iq=nmicro+1,nq
1085	zdqchi(:,:,iq) = dycchi(:,:,iq-nmicro) / rat_mmol(iq)
1086	zdqcond(:,:,iq) = dyccond(:,:,iq) / rat_mmol(iq)
1087	enddo
1088
1089	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + &
1090	zdqchi(1:ngrid,1:nlayer,1:nq) + zdqcond(1:ngrid,1:nlayer,1:nq)
1091
1092	endif
1093
1094	endif ! end of 'callchim'
1095
1096	! -------------------
1097	! V.2 Microphysics
1098	! -------------------
1099
1100	if (callmufi) then
1101
1102	! Inside this routine we will split 2D->1D, intensive->extensive and separate different types of tracers
1103	! Should be put in phytrac
1104
1105	if (ngrid.eq.1) then ! We obviously don't have access to (and don't need) zonal means in 1D
1106	call calmufi(pplev,zzlev,pplay,zzlay,pt,pq,zdqmufi)
1107	else
1108	call calmufi(zplevbar,zzlevbar,zplaybar,zzlaybar,ztfibar,pq,zdqmufi)
1109	endif
1110
1111	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + zdqmufi(1:ngrid,1:nlayer,1:nq)
1112
1113	endif ! end of 'callmufi'
1114
1115	! ---------------
1116	! V.3 Updates
1117	! ---------------
1118
1119	! Updating Atmospheric Mass and Tracers budgets.
1120	if(mass_redistrib) then
1121
1122	zdmassmr(1:ngrid,1:nlayer) = mass(1:ngrid,1:nlayer) * zdqevap(1:ngrid,1:nlayer)
1123
1124	do ig = 1, ngrid
1125	zdmassmr_col(ig)=SUM(zdmassmr(ig,1:nlayer))
1126	enddo
1127
1128	call writediagfi(ngrid,"mass_evap","mass gain"," ",3,zdmassmr)
1129	call writediagfi(ngrid,"mass_evap_col","mass gain col"," ",2,zdmassmr_col)
1130	call writediagfi(ngrid,"mass","mass","kg/m2",3,mass)
1131
1132	call mass_redistribution(ngrid,nlayer,nq,ptimestep, &
1133	capcal,pplay,pplev,pt,tsurf,pq,qsurf, &
1134	pu,pv,pdt,zdtsurf,pdq,pdu,pdv,zdmassmr, &
1135	zdtmr,zdtsurfmr,zdpsrfmr,zdumr,zdvmr,zdqmr,zdqsurfmr)
1136
1137	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + zdqmr(1:ngrid,1:nlayer,1:nq)
1138	dqsurf(1:ngrid,1:nq) = dqsurf(1:ngrid,1:nq) + zdqsurfmr(1:ngrid,1:nq)
1139	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer) + zdtmr(1:ngrid,1:nlayer)
1140	pdu(1:ngrid,1:nlayer) = pdu(1:ngrid,1:nlayer) + zdumr(1:ngrid,1:nlayer)
1141	pdv(1:ngrid,1:nlayer) = pdv(1:ngrid,1:nlayer) + zdvmr(1:ngrid,1:nlayer)
1142	pdpsrf(1:ngrid) = pdpsrf(1:ngrid) + zdpsrfmr(1:ngrid)
1143	zdtsurf(1:ngrid) = zdtsurf(1:ngrid) + zdtsurfmr(1:ngrid)
1144
1145	endif
1146
1147	! -----------------------------
1148	! V.4. Surface Tracer Update
1149	! -----------------------------
1150
1151	qsurf(1:ngrid,1:nq) = qsurf(1:ngrid,1:nq) + ptimestep*dqsurf(1:ngrid,1:nq)
1152
1153	! Add qsurf to qsurf_hist, which is what we save in diagfi.nc. At the same time, we set the water
1154	! content of ocean gridpoints back to zero, in order to avoid rounding errors in vdifc, rain.
1155	qsurf_hist(:,:) = qsurf(:,:)
1156
1157	endif! end of if 'tracer'
1158
1159
1160	!------------------------------------------------
1161	! VI. Surface and sub-surface soil temperature
1162	!------------------------------------------------
1163
1164
1165	! Increment surface temperature
1166
1167	tsurf(1:ngrid)=tsurf(1:ngrid)+ptimestep*zdtsurf(1:ngrid)
1168
1169	! Compute soil temperatures and subsurface heat flux.
1170	if (callsoil) then
1171	call soil(ngrid,nsoilmx,.false.,lastcall,inertiedat, &
1172	ptimestep,tsurf,tsoil,capcal,fluxgrd)
1173	endif
1174
1175
1176	! Test energy conservation
1177	if(enertest)then
1178	call planetwide_sumval(cell_area(:)capcal(:)zdtsurf(:)/totarea_planet,dEtots)
1179	if (is_master) print*,'Surface energy change =',dEtots,' W m-2'
1180	endif
1181
1182
1183	!---------------------------------------------------
1184	! VII. Perform diagnostics and write output files
1185	!---------------------------------------------------
1186
1187	! Note : For output only: the actual model integration is performed in the dynamics.
1188
1189
1190
1191	! Temperature, zonal and meridional winds.
1192	zt(1:ngrid,1:nlayer) = pt(1:ngrid,1:nlayer) + pdt(1:ngrid,1:nlayer)*ptimestep
1193	zu(1:ngrid,1:nlayer) = pu(1:ngrid,1:nlayer) + pdu(1:ngrid,1:nlayer)*ptimestep
1194	zv(1:ngrid,1:nlayer) = pv(1:ngrid,1:nlayer) + pdv(1:ngrid,1:nlayer)*ptimestep
1195
1196	! Diagnostic.
1197	zdtdyn(1:ngrid,1:nlayer) = (pt(1:ngrid,1:nlayer)-ztprevious(1:ngrid,1:nlayer)) / ptimestep
1198	ztprevious(1:ngrid,1:nlayer) = zt(1:ngrid,1:nlayer)
1199
1200	zdudyn(1:ngrid,1:nlayer) = (pu(1:ngrid,1:nlayer)-zuprevious(1:ngrid,1:nlayer)) / ptimestep
1201	zuprevious(1:ngrid,1:nlayer) = zu(1:ngrid,1:nlayer)
1202
1203	if(firstcall)then
1204	zdtdyn(1:ngrid,1:nlayer)=0.0
1205	zdudyn(1:ngrid,1:nlayer)=0.0
1206	endif
1207
1208	! Dynamical heating diagnostic.
1209	do ig=1,ngrid
1210	fluxdyn(ig)= SUM(zdtdyn(ig,:) mass(ig,:))cpp
1211	enddo
1212
1213	! Tracers.
1214	zq(1:ngrid,1:nlayer,1:nq) = pq(1:ngrid,1:nlayer,1:nq) + pdq(1:ngrid,1:nlayer,1:nq)*ptimestep
1215
1216	! Surface pressure.
1217	ps(1:ngrid) = pplev(1:ngrid,1) + pdpsrf(1:ngrid)*ptimestep
1218
1219
1220
1221	! Surface and soil temperature information
1222	call planetwide_sumval(cell_area(:)*tsurf(:)/totarea_planet,Ts1)
1223	call planetwide_minval(tsurf(:),Ts2)
1224	call planetwide_maxval(tsurf(:),Ts3)
1225	if(callsoil)then
1226	TsS = SUM(cell_area(:)*tsoil(:,nsoilmx))/totarea ! mean temperature at bottom soil layer
1227	if (is_master) then
1228	print*,' ave[Tsurf] min[Tsurf] max[Tsurf] ave[Tdeep]'
1229	print*,Ts1,Ts2,Ts3,TsS
1230	end if
1231	else
1232	if (is_master) then
1233	print*,' ave[Tsurf] min[Tsurf] max[Tsurf]'
1234	print*,Ts1,Ts2,Ts3
1235	endif
1236	end if
1237
1238
1239	! Check the energy balance of the simulation during the run
1240	if(corrk)then
1241
1242	call planetwide_sumval(cell_area(:)*fluxtop_dn(:)/totarea_planet,ISR)
1243	call planetwide_sumval(cell_area(:)*fluxabs_sw(:)/totarea_planet,ASR)
1244	call planetwide_sumval(cell_area(:)*fluxtop_lw(:)/totarea_planet,OLR)
1245	call planetwide_sumval(cell_area(:)*fluxgrd(:)/totarea_planet,GND)
1246	call planetwide_sumval(cell_area(:)*fluxdyn(:)/totarea_planet,DYN)
1247	do ig=1,ngrid
1248	if(fluxtop_dn(ig).lt.0.0)then
1249	print*,'fluxtop_dn has gone crazy'
1250	print*,'fluxtop_dn=',fluxtop_dn(ig)
1251	print*,'temp= ',pt(ig,:)
1252	print*,'pplay= ',pplay(ig,:)
1253	call abort
1254	endif
1255	end do
1256
1257	if(ngrid.eq.1)then
1258	DYN=0.0
1259	endif
1260
1261	if (is_master) then
1262	print*,' ISR ASR OLR GND DYN [W m^-2]'
1263	print*, ISR,ASR,OLR,GND,DYN
1264	endif
1265
1266	if(enertest .and. is_master)then
1267	print*,'SW flux/heating difference SW++ - ASR = ',dEtotSW+dEtotsSW-ASR,' W m-2'
1268	print*,'LW flux/heating difference LW++ - OLR = ',dEtotLW+dEtotsLW+OLR,' W m-2'
1269	print*,'LW energy balance LW++ + ASR = ',dEtotLW+dEtotsLW+ASR,' W m-2'
1270	endif
1271
1272	if(meanOLR .and. is_master)then
1273	if((ngrid.gt.1) .or. (mod(icount-1,ecritphy).eq.0))then
1274	! to record global radiative balance
1275	open(92,file="rad_bal.out",form='formatted',position='append')
1276	write(92,*) zday,ISR,ASR,OLR
1277	close(92)
1278	open(93,file="tem_bal.out",form='formatted',position='append')
1279	if(callsoil)then
1280	write(93,*) zday,Ts1,Ts2,Ts3,TsS
1281	else
1282	write(93,*) zday,Ts1,Ts2,Ts3
1283	endif
1284	close(93)
1285	endif
1286	endif
1287
1288	endif ! end of 'corrk'
1289
1290
1291	! Diagnostic to test radiative-convective timescales in code.
1292	if(testradtimes)then
1293	open(38,file="tau_phys.out",form='formatted',position='append')
1294	ig=1
1295	do l=1,nlayer
1296	write(38,*) -1./pdt(ig,l),pt(ig,l),pplay(ig,l)
1297	enddo
1298	close(38)
1299	print*,'As testradtimes enabled,'
1300	print*,'exiting physics on first call'
1301	call abort
1302	endif
1303
1304
1305	if (is_master) print,'--> Ls =',zls180./pi
1306
1307
1308	!----------------------------------------------------------------------
1309	! Writing NetCDF file "RESTARTFI" at the end of the run
1310	!----------------------------------------------------------------------
1311
1312	! Note: 'restartfi' is stored just before dynamics are stored
1313	! in 'restart'. Between now and the writting of 'restart',
1314	! there will have been the itau=itau+1 instruction and
1315	! a reset of 'time' (lastacll = .true. when itau+1= itaufin)
1316	! thus we store for time=time+dtvr
1317
1318
1319
1320	if(lastcall) then
1321	ztime_fin = ptime + ptimestep/(float(iphysiq)*daysec)
1322
1323	if (ngrid.ne.1) then
1324	write(,)'PHYSIQ: for physdem ztime_fin =',ztime_fin
1325
1326	call physdem1("restartfi.nc",nsoilmx,ngrid,nlayer,nq, &
1327	ptimestep,ztime_fin, &
1328	tsurf,tsoil,emis,q2,qsurf_hist,tankCH4)
1329	endif
1330
1331	endif ! end of 'lastcall'
1332
1333
1334	!-----------------------------------
1335	! Saving statistics :
1336	!-----------------------------------
1337
1338	! Note :("stats" stores and accumulates 8 key variables in file "stats.nc"
1339	! which can later be used to make the statistic files of the run:
1340	! "stats") only possible in 3D runs !!!
1341
1342
1343	if (callstats) then
1344
1345	call wstats(ngrid,"ps","Surface pressure","Pa",2,ps)
1346	call wstats(ngrid,"tsurf","Surface temperature","K",2,tsurf)
1347	call wstats(ngrid,"fluxsurf_lw", &
1348	"Thermal IR radiative flux to surface","W.m-2",2, &
1349	fluxsurf_lw)
1350	call wstats(ngrid,"fluxtop_lw", &
1351	"Thermal IR radiative flux to space","W.m-2",2, &
1352	fluxtop_lw)
1353
1354	! call wstats(ngrid,"fluxsurf_sw", &
1355	! "Solar radiative flux to surface","W.m-2",2, &
1356	! fluxsurf_sw_tot)
1357	! call wstats(ngrid,"fluxtop_sw", &
1358	! "Solar radiative flux to space","W.m-2",2, &
1359	! fluxtop_sw_tot)
1360
1361
1362	call wstats(ngrid,"ISR","incoming stellar rad.","W m-2",2,fluxtop_dn)
1363	call wstats(ngrid,"ASR","absorbed stellar rad.","W m-2",2,fluxabs_sw)
1364	call wstats(ngrid,"OLR","outgoing longwave rad.","W m-2",2,fluxtop_lw)
1365	!call wstats(ngrid,"ALB","Surface albedo"," ",2,albedo_equivalent)
1366	!call wstats(ngrid,"ALB_1st","First Band Surface albedo"," ",2,albedo(:,1))
1367	call wstats(ngrid,"p","Pressure","Pa",3,pplay)
1368	call wstats(ngrid,"temp","Atmospheric temperature","K",3,zt)
1369	call wstats(ngrid,"u","Zonal (East-West) wind","m.s-1",3,zu)
1370	call wstats(ngrid,"v","Meridional (North-South) wind","m.s-1",3,zv)
1371	call wstats(ngrid,"w","Vertical (down-up) wind","m.s-1",3,pw)
1372	call wstats(ngrid,"q2","Boundary layer eddy kinetic energy","m2.s-2",3,q2)
1373
1374	if (tracer) then
1375	do iq=1,nq
1376	call wstats(ngrid,noms(iq),noms(iq),'kg/kg',3,zq(1,1,iq))
1377	call wstats(ngrid,trim(noms(iq))//'_surf',trim(noms(iq))//'_surf', &
1378	'kg m^-2',2,qsurf(1,iq) )
1379
1380	! call wstats(ngrid,trim(noms(iq))//'_reff', &
1381	! trim(noms(iq))//'_reff', &
1382	! 'm',3,reffrad(1,1,iq))
1383
1384	end do
1385
1386	endif ! end of 'tracer'
1387
1388	if(lastcall) then
1389	write (,) "Writing stats..."
1390	call mkstats(ierr)
1391	endif
1392
1393	endif ! end of 'callstats'
1394
1395
1396	!-----------------------------------------------------------------------------------------------------
1397	! OUTPUT in netcdf file "DIAGFI.NC", containing any variable for diagnostic
1398	!
1399	! Note 1 : output with period "ecritphy", set in "run.def"
1400	!
1401	! Note 2 : writediagfi can also be called from any other subroutine for any variable,
1402	! but its preferable to keep all the calls in one place ...
1403	!-----------------------------------------------------------------------------------------------------
1404
1405
1406	call writediagfi(ngrid,"Ls","solar longitude","deg",0,zls*180./pi)
1407	call writediagfi(ngrid,"Lss","sub solar longitude","deg",0,zlss*180./pi)
1408	call writediagfi(ngrid,"RA","right ascension","deg",0,right_ascen*180./pi)
1409	call writediagfi(ngrid,"Declin","solar declination","deg",0,declin*180./pi)
1410	call writediagfi(ngrid,"tsurf","Surface temperature","K",2,tsurf)
1411	call writediagfi(ngrid,"ps","Surface pressure","Pa",2,ps)
1412	call writediagfi(ngrid,"temp","temperature","K",3,zt)
1413	call writediagfi(ngrid,"teta","potential temperature","K",3,zh)
1414	call writediagfi(ngrid,"u","Zonal wind","m.s-1",3,zu)
1415	call writediagfi(ngrid,"v","Meridional wind","m.s-1",3,zv)
1416	call writediagfi(ngrid,"w","Vertical wind","m.s-1",3,pw)
1417	call writediagfi(ngrid,"p","Pressure","Pa",3,pplay)
1418
1419	! Subsurface temperatures
1420	! call writediagsoil(ngrid,"tsurf","Surface temperature","K",2,tsurf)
1421	! call writediagsoil(ngrid,"temp","temperature","K",3,tsoil)
1422
1423
1424
1425	! Total energy balance diagnostics
1426	if(callrad.and.(.not.newtonian))then
1427
1428	!call writediagfi(ngrid,"ALB","Surface albedo"," ",2,albedo_equivalent)
1429	call writediagfi(ngrid,"ISR","incoming stellar rad.","W m-2",2,fluxtop_dn)
1430	call writediagfi(ngrid,"ASR","absorbed stellar rad.","W m-2",2,fluxabs_sw)
1431	call writediagfi(ngrid,"OLR","outgoing longwave rad.","W m-2",2,fluxtop_lw)
1432
1433	! call writediagfi(ngrid,"ASRcs","absorbed stellar rad (cs).","W m-2",2,fluxabs_sw1)
1434	! call writediagfi(ngrid,"OLRcs","outgoing longwave rad (cs).","W m-2",2,fluxtop_lw1)
1435	! call writediagfi(ngrid,"fluxsurfsw","sw surface flux.","W m-2",2,fluxsurf_sw)
1436	! call writediagfi(ngrid,"fluxsurflw","lw back radiation.","W m-2",2,fluxsurf_lw)
1437	! call writediagfi(ngrid,"fluxsurfswcs","sw surface flux (cs).","W m-2",2,fluxsurf_sw1)
1438	! call writediagfi(ngrid,"fluxsurflwcs","lw back radiation (cs).","W m-2",2,fluxsurf_lw1)
1439
1440
1441	call writediagfi(ngrid,"GND","heat flux from ground","W m-2",2,fluxgrd)
1442
1443	call writediagfi(ngrid,"DYN","dynamical heat input","W m-2",2,fluxdyn)
1444
1445	endif ! end of 'callrad'
1446
1447	if(enertest) then
1448
1449	if (calldifv) then
1450
1451	call writediagfi(ngrid,"q2","turbulent kinetic energy","J.kg^-1",3,q2)
1452	call writediagfi(ngrid,"sensibFlux","sensible heat flux","w.m^-2",2,sensibFlux)
1453
1454	! call writediagfi(ngrid,"dEzdiff","turbulent diffusion heating (-sensible flux)","w.m^-2",3,dEzdiff)
1455	! call writediagfi(ngrid,"dEdiff","integrated turbulent diffusion heating (-sensible flux)","w.m^-2",2,dEdiff)
1456	! call writediagfi(ngrid,"dEdiffs","In TurbDiff (correc rad+latent heat) surf nrj change","w.m^-2",2,dEdiffs)
1457
1458	endif
1459
1460	if (corrk) then
1461	call writediagfi(ngrid,"dEzradsw","radiative heating","w.m^-2",3,dEzradsw)
1462	call writediagfi(ngrid,"dEzradlw","radiative heating","w.m^-2",3,dEzradlw)
1463	endif
1464
1465	endif ! end of 'enertest'
1466
1467	! Temporary inclusions for winds diagnostics.
1468	call writediagfi(ngrid,"zdudif","Turbdiff tend. zon. wind","m s-2",3,zdudif)
1469	call writediagfi(ngrid,"zdudyn","Dyn. tend. zon. wind","m s-2",3,zdudyn)
1470
1471	! Temporary inclusions for heating diagnostics.
1472	call writediagfi(ngrid,"zdtsw","SW heating","T s-1",3,zdtsw)
1473	call writediagfi(ngrid,"zdtlw","LW heating","T s-1",3,zdtlw)
1474	call writediagfi(ngrid,"dtrad","radiative heating","K s-1",3,dtrad)
1475	call writediagfi(ngrid,"zdtdyn","Dyn. heating","T s-1",3,zdtdyn)
1476
1477	! For Debugging.
1478	call writediagfi(ngrid,'pphi','Geopotential',' ',3,pphi)
1479
1480
1481	! Output tracers.
1482	if (tracer) then
1483
1484	if (callmufi) then ! For now we assume an given order for tracers !
1485	call writediagfi(ngrid,"mu_m0as","Spherical mode 0th order moment",'kg/kg',3,zq(:,:,1))
1486	call writediagfi(ngrid,"mu_m3as","Spherical mode 3rd order moment",'kg/kg',3,zq(:,:,2))
1487	call writediagfi(ngrid,"mu_m0af","Fractal mode 0th order moment",'kg/kg',3,zq(:,:,3))
1488	call writediagfi(ngrid,"mu_m3af","Fractal mode 3rd order moment",'kg/kg',3,zq(:,:,4))
1489	endif ! end of 'callmufi'
1490
1491	if ( callchim .and. (.not. callmufi) ) then
1492	call writediagfi(ngrid,"C2H2","C2H2",'kg/kg',3,zq(:,:,10))
1493	call writediagfi(ngrid,"C2H4","C2H4",'kg/kg',3,zq(:,:,12))
1494	call writediagfi(ngrid,"C2H6","C2H6",'kg/kg',3,zq(:,:,14))
1495	call writediagfi(ngrid,"C4H2","C4H2",'kg/kg',3,zq(:,:,26))
1496	call writediagfi(ngrid,"HCN","HCN",'kg/kg',3,zq(:,:,36))
1497	call writediagfi(ngrid,"HC3N","HC3N",'kg/kg',3,zq(:,:,42))
1498	else if ( callchim .and. callmufi ) then
1499	call writediagfi(ngrid,"C2H2","C2H2",'kg/kg',3,zq(:,:,14))
1500	call writediagfi(ngrid,"C2H4","C2H4",'kg/kg',3,zq(:,:,16))
1501	call writediagfi(ngrid,"C2H6","C2H6",'kg/kg',3,zq(:,:,18))
1502	call writediagfi(ngrid,"C4H2","C4H2",'kg/kg',3,zq(:,:,30))
1503	call writediagfi(ngrid,"HCN","HCN",'kg/kg',3,zq(:,:,40))
1504	call writediagfi(ngrid,"HC3N","HC3N",'kg/kg',3,zq(:,:,46))
1505	endif
1506
1507	endif ! end of 'tracer'
1508
1509	! XIOS outputs
1510	#ifdef CPP_XIOS
1511	! Send fields to XIOS: (NB these fields must also be defined as
1512	! <field id="..." /> in context_lmdz_physics.xml to be correctly used)
1513	CALL send_xios_field("ls",zls)
1514
1515	CALL send_xios_field("ps",ps)
1516	CALL send_xios_field("area",cell_area)
1517
1518	CALL send_xios_field("temperature",zt)
1519	CALL send_xios_field("u",zu)
1520	CALL send_xios_field("v",zv)
1521
1522	#endif
1523
1524	icount=icount+1
1525
1526	end subroutine physiq
1527
1528	end module physiq_mod

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