Context Navigation

physiq_mod.F90 @ 1819

Last change on this file since 1819 was 1812, checked in by jvatant, 8 years ago
Correct ychim allocation that should be at firstcall JVO
Property svn:executable set to ``*
File size: 62.7 KB

Rev	Line
[1549]	1	module physiq_mod
	2
	3	implicit none
	4
	5	contains
	6
[751]	7	subroutine physiq(ngrid,nlayer,nq, &
[787]	8	nametrac, &
[253]	9	firstcall,lastcall, &
	10	pday,ptime,ptimestep, &
	11	pplev,pplay,pphi, &
	12	pu,pv,pt,pq, &
[1312]	13	flxw, &
[1576]	14	pdu,pdv,pdt,pdq,pdpsrf)
[253]	15
[1788]	16	use radinc_h, only : L_NSPECTI,L_NSPECTV
[1482]	17	use radcommon_h, only: sigma, glat, grav, BWNV
[1647]	18	use surfdat_h, only: phisfi, zmea, zstd, zsig, zgam, zthe
[1216]	19	use comdiurn_h, only: coslat, sinlat, coslon, sinlon
[1327]	20	use comsaison_h, only: mu0, fract, dist_star, declin, right_ascen
[1216]	21	use comsoil_h, only: nsoilmx, layer, mlayer, inertiedat
[1543]	22	use geometry_mod, only: latitude, longitude, cell_area
[1542]	23	USE comgeomfi_h, only: totarea, totarea_planet
[1795]	24	USE tracer_h
[1525]	25	use time_phylmdz_mod, only: ecritphy, iphysiq, nday
[1670]	26	use phyetat0_mod, only: phyetat0
[1216]	27	use phyredem, only: physdem0, physdem1
[1295]	28	use planetwide_mod, only: planetwide_minval,planetwide_maxval,planetwide_sumval
	29	use mod_phys_lmdz_para, only : is_master
[1308]	30	use planete_mod, only: apoastr, periastr, year_day, peri_day, &
	31	obliquit, nres, z0
[1524]	32	use comcstfi_mod, only: pi, g, rcp, r, rad, mugaz, cpp
	33	use time_phylmdz_mod, only: daysec
[1795]	34	use logic_mod, only: moyzon_ch, moyzon_mu
[1672]	35	use moyzon_mod, only: tmoy, playmoy, zphibar, zphisbar, zplevbar, &
	36	zplaybar, zzlevbar, zzlaybar, ztfibar
[1397]	37	use callkeys_mod
[1622]	38	use vertical_layers_mod, only: presnivs, pseudoalt
[1623]	39	#ifdef CPP_XIOS
[1622]	40	use xios_output_mod, only: initialize_xios_output, &
	41	update_xios_timestep, &
	42	send_xios_field
[1623]	43	#endif
[253]	44	implicit none
	45
	46
	47	!==================================================================
	48	!
	49	! Purpose
	50	! -------
	51	! Central subroutine for all the physics parameterisations in the
	52	! universal model. Originally adapted from the Mars LMDZ model.
	53	!
	54	! The model can be run without or with tracer transport
	55	! depending on the value of "tracer" in file "callphys.def".
	56	!
	57	!
	58	! It includes:
	59	!
[1477]	60	! I. Initialization :
	61	! I.1 Firstcall initializations.
	62	! I.2 Initialization for every call to physiq.
[253]	63	!
[1477]	64	! II. Compute radiative transfer tendencies (longwave and shortwave) :
	65	! II.a Option 1 : Call correlated-k radiative transfer scheme.
	66	! II.b Option 2 : Call Newtonian cooling scheme.
	67	! II.c Option 3 : Atmosphere has no radiative effect.
	68	!
	69	! III. Vertical diffusion (turbulent mixing) :
	70	!
	71	! IV. Dry Convective adjustment :
	72	!
[1647]	73	! V. Tracers
[1672]	74	! V.1. Chemistry
[1795]	75	! V.2. Microphysics
[1672]	76	! V.3. Updates (pressure variations, surface budget).
	77	! V.4. Surface Tracer Update.
[1477]	78	!
[1647]	79	! VI. Surface and sub-surface soil temperature.
[1477]	80	!
[1647]	81	! VII. Perform diagnostics and write output files.
[1477]	82	!
	83	!
[253]	84	! arguments
	85	! ---------
	86	!
[1477]	87	! INPUT
[253]	88	! -----
[1477]	89	!
[253]	90	! ngrid Size of the horizontal grid.
	91	! nlayer Number of vertical layers.
[1477]	92	! nq Number of advected fields.
	93	! nametrac Name of corresponding advected fields.
	94	!
	95	! firstcall True at the first call.
	96	! lastcall True at the last call.
	97	!
	98	! pday Number of days counted from the North. Spring equinoxe.
	99	! ptime Universal time (0<ptime<1): ptime=0.5 at 12:00 UT.
	100	! ptimestep timestep (s).
	101	!
	102	! pplay(ngrid,nlayer) Pressure at the middle of the layers (Pa).
	103	! pplev(ngrid,nlayer+1) Intermediate pressure levels (Pa).
	104	! pphi(ngrid,nlayer) Geopotential at the middle of the layers (m2.s-2).
	105	!
	106	! pu(ngrid,nlayer) u, zonal component of the wind (ms-1).
	107	! pv(ngrid,nlayer) v, meridional component of the wind (ms-1).
	108	!
	109	! pt(ngrid,nlayer) Temperature (K).
	110	!
	111	! pq(ngrid,nlayer,nq) Advected fields.
	112	!
[1216]	113	! pudyn(ngrid,nlayer) \
[253]	114	! pvdyn(ngrid,nlayer) \ Dynamical temporal derivative for the
[1477]	115	! ptdyn(ngrid,nlayer) / corresponding variables.
[253]	116	! pqdyn(ngrid,nlayer,nq) /
[1312]	117	! flxw(ngrid,nlayer) vertical mass flux (kg/s) at layer lower boundary
[253]	118	!
[1477]	119	! OUTPUT
[253]	120	! ------
	121	!
[1308]	122	! pdu(ngrid,nlayer) \
	123	! pdv(ngrid,nlayer) \ Temporal derivative of the corresponding
	124	! pdt(ngrid,nlayer) / variables due to physical processes.
	125	! pdq(ngrid,nlayer) /
[253]	126	! pdpsrf(ngrid) /
	127	!
	128	!
	129	! Authors
	130	! -------
[1524]	131	! Frederic Hourdin 15/10/93
	132	! Francois Forget 1994
	133	! Christophe Hourdin 02/1997
[253]	134	! Subroutine completely rewritten by F. Forget (01/2000)
	135	! Water ice clouds: Franck Montmessin (update 06/2003)
	136	! Radiatively active tracers: J.-B. Madeleine (10/2008-06/2009)
	137	! New correlated-k radiative scheme: R. Wordsworth (2009)
	138	! Many specifically Martian subroutines removed: R. Wordsworth (2009)
	139	! Improved water cycle: R. Wordsworth / B. Charnay (2010)
	140	! To F90: R. Wordsworth (2010)
[594]	141	! New turbulent diffusion scheme: J. Leconte (2012)
[716]	142	! Loops converted to F90 matrix format: J. Leconte (2012)
[787]	143	! No more ngridmx/nqmx, F90 commons and adaptation to parallel: A. Spiga (2012)
[1477]	144	! Purge of the code : M. Turbet (2015)
[1672]	145	! Fork for Titan : J. Vatant d'Ollone (2017)
	146	! + clean of all too-generic (ocean, water, co2 ...) routines
	147	! + Titan's chemistry
[1647]	148	!============================================================================================
[253]	149
	150
	151	! 0. Declarations :
	152	! ------------------
	153
[1670]	154	include "netcdf.inc"
[253]	155
	156	! Arguments :
	157	! -----------
	158
[1477]	159	! INPUTS:
[253]	160	! -------
	161
[1795]	162
[1477]	163	integer,intent(in) :: ngrid ! Number of atmospheric columns.
	164	integer,intent(in) :: nlayer ! Number of atmospheric layers.
	165	integer,intent(in) :: nq ! Number of tracers.
	166	character*20,intent(in) :: nametrac(nq) ! Names of the tracers taken from dynamics.
	167
	168	logical,intent(in) :: firstcall ! Signals first call to physics.
	169	logical,intent(in) :: lastcall ! Signals last call to physics.
	170
	171	real,intent(in) :: pday ! Number of elapsed sols since reference Ls=0.
	172	real,intent(in) :: ptime ! "Universal time", given as fraction of sol (e.g.: 0.5 for noon).
	173	real,intent(in) :: ptimestep ! Physics timestep (s).
	174	real,intent(in) :: pplev(ngrid,nlayer+1) ! Inter-layer pressure (Pa).
	175	real,intent(in) :: pplay(ngrid,nlayer) ! Mid-layer pressure (Pa).
	176	real,intent(in) :: pphi(ngrid,nlayer) ! Geopotential at mid-layer (m2s-2).
	177	real,intent(in) :: pu(ngrid,nlayer) ! Zonal wind component (m/s).
	178	real,intent(in) :: pv(ngrid,nlayer) ! Meridional wind component (m/s).
	179	real,intent(in) :: pt(ngrid,nlayer) ! Temperature (K).
	180	real,intent(in) :: pq(ngrid,nlayer,nq) ! Tracers (kg/kg_of_air).
	181	real,intent(in) :: flxw(ngrid,nlayer) ! Vertical mass flux (ks/s) at lower boundary of layer
[253]	182
[1477]	183	! OUTPUTS:
[253]	184	! --------
	185
[1477]	186	! Physical tendencies :
	187
	188	real,intent(out) :: pdu(ngrid,nlayer) ! Zonal wind tendencies (m/s/s).
	189	real,intent(out) :: pdv(ngrid,nlayer) ! Meridional wind tendencies (m/s/s).
	190	real,intent(out) :: pdt(ngrid,nlayer) ! Temperature tendencies (K/s).
	191	real,intent(out) :: pdq(ngrid,nlayer,nq) ! Tracer tendencies (kg/kg_of_air/s).
	192	real,intent(out) :: pdpsrf(ngrid) ! Surface pressure tendency (Pa/s).
	193
[253]	194	! Local saved variables:
	195	! ----------------------
	196
[1622]	197	integer,save :: day_ini ! Initial date of the run (sol since Ls=0).
	198	integer,save :: icount ! Counter of calls to physiq during the run.
	199	!$OMP THREADPRIVATE(day_ini,icount)
	200
[1482]	201	real, dimension(:),allocatable,save :: tsurf ! Surface temperature (K).
	202	real, dimension(:,:),allocatable,save :: tsoil ! Sub-surface temperatures (K).
	203	real, dimension(:,:),allocatable,save :: albedo ! Surface Spectral albedo. By MT2015.
	204	real, dimension(:),allocatable,save :: albedo_equivalent ! Spectral Mean albedo.
[1477]	205
[1647]	206	!$OMP THREADPRIVATE(tsurf,tsoil,albedo,albedo_equivalent)
[253]	207
[1482]	208	real,dimension(:),allocatable,save :: albedo_bareground ! Bare Ground Albedo. By MT 2015.
[1477]	209
[1647]	210	!$OMP THREADPRIVATE(albedo_bareground)
[253]	211
[1477]	212	real,dimension(:),allocatable,save :: emis ! Thermal IR surface emissivity.
	213	real,dimension(:,:),allocatable,save :: dtrad ! Net atmospheric radiative heating rate (K.s-1).
	214	real,dimension(:),allocatable,save :: fluxrad_sky ! Radiative flux from sky absorbed by surface (W.m-2).
	215	real,dimension(:),allocatable,save :: fluxrad ! Net radiative surface flux (W.m-2).
	216	real,dimension(:),allocatable,save :: capcal ! Surface heat capacity (J m-2 K-1).
	217	real,dimension(:),allocatable,save :: fluxgrd ! Surface conduction flux (W.m-2).
	218	real,dimension(:,:),allocatable,save :: qsurf ! Tracer on surface (e.g. kg.m-2).
	219	real,dimension(:,:),allocatable,save :: q2 ! Turbulent Kinetic Energy.
	220
[1315]	221	!$OMP THREADPRIVATE(emis,dtrad,fluxrad_sky,fluxrad,capcal,fluxgrd,qsurf,q2)
[253]	222
	223
	224	! Local variables :
	225	! -----------------
	226
[1477]	227	real zh(ngrid,nlayer) ! Potential temperature (K).
	228	real pw(ngrid,nlayer) ! Vertical velocity (m/s). (NOTE : >0 WHEN DOWNWARDS !!)
	229
[1670]	230	integer l,ig,ierr,iq,nw,isoil
[1161]	231
[1477]	232	! FOR DIAGNOSTIC :
	233
[1482]	234	real,dimension(:),allocatable,save :: fluxsurf_lw ! Incident Long Wave (IR) surface flux (W.m-2).
	235	real,dimension(:),allocatable,save :: fluxsurf_sw ! Incident Short Wave (stellar) surface flux (W.m-2).
	236	real,dimension(:),allocatable,save :: fluxsurfabs_sw ! Absorbed Short Wave (stellar) flux by the surface (W.m-2).
	237	real,dimension(:),allocatable,save :: fluxtop_lw ! Outgoing LW (IR) flux to space (W.m-2).
	238	real,dimension(:),allocatable,save :: fluxabs_sw ! Absorbed SW (stellar) flux (W.m-2).
	239	real,dimension(:),allocatable,save :: fluxtop_dn ! Incoming SW (stellar) radiation at the top of the atmosphere (W.m-2).
	240	real,dimension(:),allocatable,save :: fluxdyn ! Horizontal heat transport by dynamics (W.m-2).
	241	real,dimension(:,:),allocatable,save :: OLR_nu ! Outgoing LW radiation in each band (Normalized to the band width (W/m2/cm-1)).
	242	real,dimension(:,:),allocatable,save :: OSR_nu ! Outgoing SW radiation in each band (Normalized to the band width (W/m2/cm-1)).
	243	real,dimension(:,:),allocatable,save :: zdtlw ! LW heating tendencies (K/s).
	244	real,dimension(:,:),allocatable,save :: zdtsw ! SW heating tendencies (K/s).
	245	real,dimension(:),allocatable,save :: sensibFlux ! Turbulent flux given by the atmosphere to the surface (W.m-2).
[1477]	246
[1482]	247	!$OMP THREADPRIVATE(fluxsurf_lw,fluxsurf_sw,fluxsurfabs_sw,fluxtop_lw,fluxabs_sw,fluxtop_dn,fluxdyn,OLR_nu,OSR_nu,&
[1524]	248
[1477]	249	!$OMP zdtlw,zdtsw,sensibFlux)
[253]	250
[1477]	251	real zls ! Solar longitude (radians).
	252	real zlss ! Sub solar point longitude (radians).
	253	real zday ! Date (time since Ls=0, calculated in sols).
	254	real zzlay(ngrid,nlayer) ! Altitude at the middle of the atmospheric layers.
	255	real zzlev(ngrid,nlayer+1) ! Altitude at the atmospheric layer boundaries.
[253]	256
[1477]	257	! TENDENCIES due to various processes :
[253]	258
[1477]	259	! For Surface Temperature : (K/s)
	260	real zdtsurf(ngrid) ! Cumulated tendencies.
	261	real zdtsurfmr(ngrid) ! Mass_redistribution routine.
	262	real zdtsdif(ngrid) ! Turbdiff/vdifc routines.
	263
	264	! For Atmospheric Temperatures : (K/s)
[1647]	265	real zdtdif(ngrid,nlayer) ! Turbdiff/vdifc routines.
[1477]	266	real zdtmr(ngrid,nlayer) ! Mass_redistribution routine.
	267	real zdtsw1(ngrid,nlayer), zdtlw1(ngrid,nlayer) ! Callcorrk routine.
	268
	269	! For Surface Tracers : (kg/m2/s)
	270	real dqsurf(ngrid,nq) ! Cumulated tendencies.
	271	real zdqsdif(ngrid,nq) ! Turbdiff/vdifc routines.
	272	real zdqsurfmr(ngrid,nq) ! Mass_redistribution routine.
	273
	274	! For Tracers : (kg/kg_of_air/s)
	275	real zdqadj(ngrid,nlayer,nq) ! Convadj routine.
	276	real zdqdif(ngrid,nlayer,nq) ! Turbdiff/vdifc routines.
	277	real zdqevap(ngrid,nlayer) ! Turbdiff routine.
	278	real zdqmr(ngrid,nlayer,nq) ! Mass_redistribution routine.
[1672]	279
	280	real zdqchi(ngrid,nlayer,nq) ! Chemical tendency ( chemistry routine ).
[1795]	281	real zdqcond(ngrid,nlayer,nq) ! Condensation tendency ( chemistry routine ).
	282
	283	real zdqmufi(ngrid,nlayer,nq) ! Microphysical tendency.
[1477]	284
	285	! For Winds : (m/s/s)
	286	real zdvadj(ngrid,nlayer),zduadj(ngrid,nlayer) ! Convadj routine.
	287	real zdumr(ngrid,nlayer),zdvmr(ngrid,nlayer) ! Mass_redistribution routine.
	288	real zdvdif(ngrid,nlayer),zdudif(ngrid,nlayer) ! Turbdiff/vdifc routines.
	289	real zdhdif(ngrid,nlayer) ! Turbdiff/vdifc routines.
	290	real zdhadj(ngrid,nlayer) ! Convadj routine.
	291
	292	! For Pressure and Mass :
	293	real zdmassmr(ngrid,nlayer) ! Atmospheric Mass tendency for mass_redistribution (kg_of_air/m2/s).
	294	real zdmassmr_col(ngrid) ! Atmospheric Column Mass tendency for mass_redistribution (kg_of_air/m2/s).
	295	real zdpsrfmr(ngrid) ! Pressure tendency for mass_redistribution routine (Pa/s).
[253]	296
[1477]	297
	298
	299	! Local variables for LOCAL CALCULATIONS:
	300	! ---------------------------------------
[787]	301	real zflubid(ngrid)
[1308]	302	real zplanck(ngrid),zpopsk(ngrid,nlayer)
[253]	303	real ztim1,ztim2,ztim3, z1,z2
	304	real ztime_fin
[1308]	305	real zdh(ngrid,nlayer)
[1194]	306	real gmplanet
[1297]	307	real taux(ngrid),tauy(ngrid)
[1194]	308
[253]	309
[1477]	310	! local variables for DIAGNOSTICS : (diagfi & stat)
	311	! -------------------------------------------------
	312	real ps(ngrid) ! Surface Pressure.
	313	real zt(ngrid,nlayer) ! Atmospheric Temperature.
	314	real zu(ngrid,nlayer),zv(ngrid,nlayer) ! Zonal and Meridional Winds.
	315	real zq(ngrid,nlayer,nq) ! Atmospheric Tracers.
	316	real zdtadj(ngrid,nlayer) ! Convadj Diagnostic.
	317	real zdtdyn(ngrid,nlayer) ! Dynamical Heating (K/s).
[1637]	318	real zdudyn(ngrid,nlayer) ! Dynamical Zonal Wind tendency (m.s-2).
[1477]	319	real,allocatable,dimension(:,:),save :: ztprevious ! Previous loop Atmospheric Temperature (K) ! Useful for Dynamical Heating calculation.
[1637]	320	real,allocatable,dimension(:,:),save :: zuprevious ! Previous loop Zonal Wind (m.s-1) ! Useful for Zonal Wind tendency calculation.
	321	!$OMP THREADPRIVATE(ztprevious,zuprevious)
[253]	322
[1477]	323	real vmr(ngrid,nlayer) ! volume mixing ratio
[253]	324	real time_phys
[597]	325
[1477]	326	real ISR,ASR,OLR,GND,DYN,GSR,Ts1,Ts2,Ts3,TsS ! for Diagnostic.
	327
[594]	328	! to test energy conservation (RW+JL)
[1308]	329	real mass(ngrid,nlayer),massarea(ngrid,nlayer)
[651]	330	real dEtot, dEtots, AtmToSurf_TurbFlux
[959]	331	real,save :: dEtotSW, dEtotsSW, dEtotLW, dEtotsLW
[1315]	332	!$OMP THREADPRIVATE(dEtotSW, dEtotsSW, dEtotLW, dEtotsLW)
[1308]	333	real dEzRadsw(ngrid,nlayer),dEzRadlw(ngrid,nlayer),dEzdiff(ngrid,nlayer)
[787]	334	real dEdiffs(ngrid),dEdiff(ngrid)
[1477]	335
[594]	336	!JL12 conservation test for mean flow kinetic energy has been disabled temporarily
[1477]	337
[1295]	338	real dItot, dItot_tmp, dVtot, dVtot_tmp
[1647]	339
[1295]	340	real dWtot, dWtot_tmp, dWtots, dWtots_tmp
[1477]	341
	342
[1482]	343	! For Clear Sky Case.
	344	real fluxsurf_lw1(ngrid), fluxsurf_sw1(ngrid), fluxsurfabs_sw1(ngrid) ! For SW/LW flux.
	345	real fluxtop_lw1(ngrid), fluxabs_sw1(ngrid) ! For SW/LW flux.
	346	real albedo_equivalent1(ngrid) ! For Equivalent albedo calculation.
[1647]	347	real tf, ntf
[253]	348
[787]	349	real,allocatable,dimension(:,:),save :: qsurf_hist
[1315]	350	!$OMP THREADPRIVATE(qsurf_hist)
[253]	351
[1672]	352	! Local variables for Titan chemistry and microphysics (JVO 2017)
	353	! ----------------------------------------------------------------------------
	354
[1795]	355	character*10,dimension(:),allocatable,save :: nomqy
[996]	356
[1795]	357	!$OMP THREADPRIVATE(nomqy)
	358
[1672]	359	real ctimestep ! Chemistry timestep (s)
	360
	361	! Grandeurs en moyennes zonales ------------------------
	362	real temp_eq(nlayer), press_eq(nlayer)
	363	real zplev(ngrid,nlayer+1),zplay(ngrid,nlayer)
	364	real ztemp(ngrid,nlayer)
	365
[1795]	366	real , allocatable, dimension(:,:,:),save :: ychim
[1672]	367
[1795]	368	! 2D vmr tendencies ( chemistry and condensation ) for chem. tracers
	369	real,dimension(:,:,:),allocatable,save :: dycchi ! Saved since chemistry is not called every step
	370	real dyccond(ngrid,nlayer,nq)
[1672]	371
[1795]	372	real,dimension(:,:),allocatable,save :: qysat
[1672]	373
[1795]	374	!$OMP THREADPRIVATE(ychim,dycchi,qysat)
[1672]	375
[1789]	376	real,dimension(:),allocatable,save :: tankCH4 ! Depth of surface methane tank
	377	!$OMP THREADPRIVATE(tankCH4)
	378
[1672]	379	!-----------------------------------------------------------------------------
[1795]	380	! Interface to calmufi
	381	! --> needed in order to pass assumed-shape arrays. Otherwise we must put calmufi in a module
	382	! (to have an explicit generated by the compiler).
	383	! Or one can put calmufi in MMP_GCM module (in muphytitan).
	384	INTERFACE
	385	SUBROUTINE calmufi(plev, zlev, play, zlay, temp, pq, zdq)
	386	REAL(kind=8), DIMENSION(:,:), INTENT(IN) :: plev !! Pressure levels (Pa).
	387	REAL(kind=8), DIMENSION(:,:), INTENT(IN) :: zlev !! Altitude levels (m).
	388	REAL(kind=8), DIMENSION(:,:), INTENT(IN) :: play !! Pressure layers (Pa).
	389	REAL(kind=8), DIMENSION(:,:), INTENT(IN) :: zlay !! Altitude at the center of each layer (m).
	390	REAL(kind=8), DIMENSION(:,:), INTENT(IN) :: temp !! Temperature at the center of each layer (K).
	391	REAL(kind=8), DIMENSION(:,:,:), INTENT(IN) :: pq !! Tracers ($kg.kg^{-1}}$).
	392	REAL(kind=8), DIMENSION(:,:,:), INTENT(OUT) :: zdq !! Tendency for tracers ($kg.kg^{-1}}$).
	393	END SUBROUTINE calmufi
	394	END INTERFACE
[1672]	395
[1477]	396	!==================================================================================================
[253]	397
	398	! -----------------
[1477]	399	! I. INITIALISATION
	400	! -----------------
[253]	401
[1477]	402	! --------------------------------
	403	! I.1 First Call Initialisation.
	404	! --------------------------------
[253]	405	if (firstcall) then
[1795]	406	! initracer:
	407	! initialize nmicro,
	408	call initracer2(nq,nametrac)
[253]	409
[1795]	410	! ----------------------------------------------------------------------------
	411
[1477]	412	! Allocate saved arrays.
[858]	413	ALLOCATE(tsurf(ngrid))
	414	ALLOCATE(tsoil(ngrid,nsoilmx))
[1482]	415	ALLOCATE(albedo(ngrid,L_NSPECTV))
[1647]	416	ALLOCATE(albedo_equivalent(ngrid))
	417	ALLOCATE(albedo_bareground(ngrid))
[858]	418	ALLOCATE(emis(ngrid))
[1308]	419	ALLOCATE(dtrad(ngrid,nlayer))
[858]	420	ALLOCATE(fluxrad_sky(ngrid))
	421	ALLOCATE(fluxrad(ngrid))
	422	ALLOCATE(capcal(ngrid))
	423	ALLOCATE(fluxgrd(ngrid))
	424	ALLOCATE(qsurf(ngrid,nq))
[1308]	425	ALLOCATE(q2(ngrid,nlayer+1))
[1789]	426	ALLOCATE(tankCH4(ngrid))
[1308]	427	ALLOCATE(ztprevious(ngrid,nlayer))
[1637]	428	ALLOCATE(zuprevious(ngrid,nlayer))
[858]	429	ALLOCATE(qsurf_hist(ngrid,nq))
	430	ALLOCATE(fluxsurf_lw(ngrid))
	431	ALLOCATE(fluxsurf_sw(ngrid))
[1482]	432	ALLOCATE(fluxsurfabs_sw(ngrid))
[858]	433	ALLOCATE(fluxtop_lw(ngrid))
	434	ALLOCATE(fluxabs_sw(ngrid))
	435	ALLOCATE(fluxtop_dn(ngrid))
	436	ALLOCATE(fluxdyn(ngrid))
	437	ALLOCATE(OLR_nu(ngrid,L_NSPECTI))
	438	ALLOCATE(OSR_nu(ngrid,L_NSPECTV))
	439	ALLOCATE(sensibFlux(ngrid))
[1308]	440	ALLOCATE(zdtlw(ngrid,nlayer))
	441	ALLOCATE(zdtsw(ngrid,nlayer))
[1672]	442	ALLOCATE(dycchi(ngrid,nlayer,nq-nmicro))
	443	ALLOCATE(qysat(nlayer,nq-nmicro))
[1795]	444	ALLOCATE(nomqy(nq-nmicro+1)) ! +1 because of hv
[1672]	445
[1477]	446	! This is defined in comsaison_h
[1161]	447	ALLOCATE(mu0(ngrid))
[1477]	448	ALLOCATE(fract(ngrid))
	449	! This is defined in radcommon_h
	450	ALLOCATE(glat(ngrid))
	451
[787]	452
[1477]	453	! Variables set to 0
[253]	454	! ~~~~~~~~~~~~~~~~~~
	455	dtrad(:,:) = 0.0
	456	fluxrad(:) = 0.0
	457	zdtsw(:,:) = 0.0
	458	zdtlw(:,:) = 0.0
[726]	459
[1795]	460	! Initialize names, timestep and saturation profiles for chemistry
	461	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
	462
	463	if ( callchim .and. (nq.gt.nmicro) ) then
	464
[1812]	465	allocate(ychim(ngrid,nlayer,nq-nmicro))
	466
[1795]	467	ctimestep = ptimestep*REAL(ichim)
	468
	469	do iq=nmicro+1,nq
	470	nomqy(iq-nmicro) = nametrac(iq)
	471	enddo
	472
	473	nomqy(nq-nmicro+1) = "HV"
	474
	475	! qysat is taken at the equator ( small variations of t,p)
	476	temp_eq(:) = tmoy(:)
	477	press_eq(:) = playmoy(:)/100. ! en mbar
	478
	479	call inicondens(nq-nmicro,press_eq,temp_eq,nomqy,qysat)
	480
	481	zdqchi(:,:,:) = 0.0
	482	zdqcond(:,:,:) = 0.0
	483
[1477]	484	endif
[253]	485
[1795]	486	! Initialize microphysics.
	487	! ~~~~~~~~~~~~~~~~~~~~~~~~
[726]	488
[1795]	489	IF ( callmufi ) THEN
	490
	491	call inimufi(nq,ptimestep)
	492
	493	ENDIF
	494
	495
[1477]	496	! Read 'startfi.nc' file.
[253]	497	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[1672]	498	call phyetat0(startphy_file,ngrid,nlayer,"startfi.nc",0,0,nsoilmx,nq, &
[1789]	499	day_ini,time_phys,tsurf,tsoil,emis,q2,qsurf,tankCH4)
[1670]	500	if (.not.startphy_file) then
	501	! additionnal "academic" initialization of physics
	502	if (is_master) write(,) "Physiq: initializing tsurf(:) to pt(:,1) !!"
	503	tsurf(:)=pt(:,1)
	504	if (is_master) write(,) "Physiq: initializing tsoil(:) to pt(:,1) !!"
	505	do isoil=1,nsoilmx
	506	tsoil(1:ngrid,isoil)=tsurf(1:ngrid)
	507	enddo
	508	if (is_master) write(,) "Physiq: initializing day_ini to pdat !"
	509	day_ini=pday
	510	endif
[253]	511
	512	if (pday.ne.day_ini) then
	513	write(,) "ERROR in physiq.F90:"
	514	write(,) "bad synchronization between physics and dynamics"
	515	write(,) "dynamics day: ",pday
	516	write(,) "physics day: ",day_ini
	517	stop
	518	endif
	519
	520	write (,) 'In physiq day_ini =', day_ini
	521
[1482]	522	! Initialize albedo calculation.
	523	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
	524	albedo(:,:)=0.0
[1524]	525	albedo_bareground(:)=0.0
[1647]	526	call surfini(ngrid,nq,qsurf,albedo,albedo_bareground)
[1482]	527
	528	! Initialize orbital calculation.
	529	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[253]	530	call iniorbit(apoastr,periastr,year_day,peri_day,obliquit)
	531
	532	if(tlocked)then
	533	print*,'Planet is tidally locked at resonance n=',nres
	534	print*,'Make sure you have the right rotation rate!!!'
	535	endif
	536
[1297]	537
[1477]	538	! Initialize soil.
	539	! ~~~~~~~~~~~~~~~~
[253]	540	if (callsoil) then
[1477]	541
[787]	542	call soil(ngrid,nsoilmx,firstcall,lastcall,inertiedat, &
[1477]	543	ptimestep,tsurf,tsoil,capcal,fluxgrd)
[1297]	544
[1477]	545	else ! else of 'callsoil'.
	546
[253]	547	print*,'WARNING! Thermal conduction in the soil turned off'
[918]	548	capcal(:)=1.e6
[952]	549	fluxgrd(:)=intheat
	550	print*,'Flux from ground = ',intheat,' W m^-2'
[1477]	551
	552	endif ! end of 'callsoil'.
	553
[253]	554	icount=1
[1477]	555
[253]	556
[1477]	557	! Initialize surface history variable.
[253]	558	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[728]	559	qsurf_hist(:,:)=qsurf(:,:)
[253]	560
[1637]	561	! Initialize variable for dynamical heating and zonal wind tendency diagnostic
	562	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[253]	563	ztprevious(:,:)=pt(:,:)
[1637]	564	zuprevious(:,:)=pu(:,:)
[253]	565
	566
[1477]	567	if(meanOLR)then
	568	call system('rm -f rad_bal.out') ! to record global radiative balance.
	569	call system('rm -f tem_bal.out') ! to record global mean/max/min temperatures.
	570	call system('rm -f h2o_bal.out') ! to record global hydrological balance.
[253]	571	endif
	572
[1477]	573	if (ngrid.ne.1) then ! Note : no need to create a restart file in 1d.
[1542]	574	call physdem0("restartfi.nc",longitude,latitude,nsoilmx,ngrid,nlayer,nq, &
	575	ptimestep,pday+nday,time_phys,cell_area, &
[1482]	576	albedo_bareground,inertiedat,zmea,zstd,zsig,zgam,zthe)
[1216]	577	endif
[1672]	578
[1795]	579	! Sanity check for microphysics
	580	if ( ((.not.moyzon_mu).and.(callmufi)) ) then
	581	print *, "moyzon_mu=",moyzon_mu," and callmufi=",callmufi
	582	print *, "Please activate zonal mean to run microphysics (for now) !"
	583	stop
	584	endif
	585
[1672]	586	! Sanity check for chemistry
[1795]	587	if ( (.not.moyzon_ch) .and. (callchim) ) then
[1672]	588	print *, "moyzon_ch=",moyzon_ch," and callchim=",callchim
[1795]	589	print *, "Please activate zonal mean to run chemistry !"
[1672]	590	stop
	591	endif
	592
[1216]	593
[1622]	594	! XIOS outputs
	595	#ifdef CPP_XIOS
	596
	597	write(,) "physiq: call initialize_xios_output"
	598	call initialize_xios_output(pday,ptime,ptimestep,daysec, &
	599	presnivs,pseudoalt)
	600	#endif
[1477]	601	endif ! end of 'firstcall'
[253]	602
[1477]	603	! ------------------------------------------------------
	604	! I.2 Initializations done at every physical timestep:
	605	! ------------------------------------------------------
	606
[1622]	607	#ifdef CPP_XIOS
	608	! update XIOS time/calendar
	609	call update_xios_timestep
	610	#endif
	611
[1477]	612	! Initialize various variables
	613	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[1647]	614
	615	pdt(1:ngrid,1:nlayer) = 0.0
[1477]	616	zdtsurf(1:ngrid) = 0.0
[1308]	617	pdq(1:ngrid,1:nlayer,1:nq) = 0.0
[1477]	618	dqsurf(1:ngrid,1:nq)= 0.0
	619	pdu(1:ngrid,1:nlayer) = 0.0
	620	pdv(1:ngrid,1:nlayer) = 0.0
[787]	621	pdpsrf(1:ngrid) = 0.0
[1477]	622	zflubid(1:ngrid) = 0.0
[1297]	623	taux(1:ngrid) = 0.0
	624	tauy(1:ngrid) = 0.0
[253]	625
[1477]	626	zday=pday+ptime ! Compute time, in sols (and fraction thereof).
[1297]	627
[1477]	628	! Compute Stellar Longitude (Ls), and orbital parameters.
	629	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[253]	630	if (season) then
	631	call stellarlong(zday,zls)
	632	else
	633	call stellarlong(float(day_ini),zls)
	634	end if
	635
[1329]	636	call orbite(zls,dist_star,declin,right_ascen)
[1477]	637
[1329]	638	if (tlocked) then
	639	zlss=Mod(-(2.pi(zday/year_day)nres - right_ascen),2.pi)
	640	elseif (diurnal) then
[1524]	641	zlss=-2.pi(zday-.5)
[1329]	642	else if(diurnal .eqv. .false.) then
	643	zlss=9999.
	644	endif
[1194]	645
	646
[1477]	647	! Compute variations of g with latitude (oblate case).
	648	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
	649	if (oblate .eqv. .false.) then
	650	glat(:) = g
	651	else if (flatten .eq. 0.0 .or. J2 .eq. 0.0 .or. Rmean .eq. 0.0 .or. MassPlanet .eq. 0.0) then
	652	print*,'I need values for flatten, J2, Rmean and MassPlanet to compute glat (else set oblate=.false.)'
	653	call abort
	654	else
	655	gmplanet = MassPlanetgrav1e24
	656	do ig=1,ngrid
[1542]	657	glat(ig)= gmplanet/(Rmean*2) (1.D0 + 0.75 J2 - 2.0flatten/3. + (2.flatten - 15./4. J2) * cos(2. * (pi/2. - latitude(ig))))
[1477]	658	end do
	659	endif
[1297]	660
[1477]	661	! Compute geopotential between layers.
	662	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[1308]	663	zzlay(1:ngrid,1:nlayer)=pphi(1:ngrid,1:nlayer)
	664	do l=1,nlayer
[1477]	665	zzlay(1:ngrid,l)= zzlay(1:ngrid,l)/glat(1:ngrid)
[1194]	666	enddo
[728]	667
[787]	668	zzlev(1:ngrid,1)=0.
[1477]	669	zzlev(1:ngrid,nlayer+1)=1.e7 ! Dummy top of last layer above 10000 km...
[728]	670
[253]	671	do l=2,nlayer
	672	do ig=1,ngrid
	673	z1=(pplay(ig,l-1)+pplev(ig,l))/(pplay(ig,l-1)-pplev(ig,l))
	674	z2=(pplev(ig,l)+pplay(ig,l))/(pplev(ig,l)-pplay(ig,l))
	675	zzlev(ig,l)=(z1zzlay(ig,l-1)+z2zzlay(ig,l))/(z1+z2)
	676	enddo
[1477]	677	enddo
[253]	678
[1672]	679	! -------------------------------Taken from old Titan --------------------------
	680	! zonal averages needed
[1795]	681	if (moyzon_ch .or. moyzon_mu) then
[1672]	682
	683	zzlaybar(1,:)=(zphibar(1,:)+zphisbar(1))/g
	684	! SI ON TIENT COMPTE DE LA VARIATION DE G AVEC L'ALTITUDE:
	685	! zzlaybar(1,:)=RGRARA/(RG*RA-(zphibar(1,:)+zphisbar(1)))-RA
	686	zzlevbar(1,1)=zphisbar(1)/g
	687	DO l=2,nlayer
	688	z1=(zplaybar(1,l-1)+zplevbar(1,l))/(zplevbar(1,l-1)-zplevbar(1,l))
	689	z2=(zplevbar(1,l) +zplaybar(1,l))/(zplevbar(1,l) -zplaybar(1,l))
	690	zzlevbar(1,l)=(z1zzlaybar(1,l-1)+z2zzlaybar(1,l))/(z1+z2)
	691	ENDDO
	692	zzlevbar(1,nlayer+1)=zzlaybar(1,nlayer)+(zzlaybar(1,nlayer)-zzlevbar(1,nlayer))
	693
	694	DO ig=2,ngrid
	695	if (latitude(ig).ne.latitude(ig-1)) then
	696	DO l=1,nlayer
	697	zzlaybar(ig,l)=(zphibar(ig,l)+zphisbar(ig))/g
	698	! SI ON TIENT COMPTE DE LA VARIATION DE G AVEC L'ALTITUDE:
	699	!zzlaybar(ig,l)=RGRARA/(RG*RA-(zphibar(ig,l)+zphisbar(ig)))-RA
	700	ENDDO
	701	zzlevbar(ig,1)=zphisbar(ig)/g
	702	DO l=2,nlayer
	703	z1=(zplaybar(ig,l-1)+zplevbar(ig,l))/ (zplevbar(ig,l-1)-zplevbar(ig,l))
	704	z2=(zplevbar(ig,l) +zplaybar(ig,l))/(zplevbar(ig,l) -zplaybar(ig,l))
	705	zzlevbar(ig,l)=(z1zzlaybar(ig,l-1)+z2zzlaybar(ig,l))/(z1+z2)
	706	ENDDO
	707	zzlevbar(ig,nlayer+1)=zzlaybar(ig,nlayer)+(zzlaybar(ig,nlayer)-zzlevbar(ig,nlayer))
	708	else
	709	zzlaybar(ig,:)=zzlaybar(ig-1,:)
	710	zzlevbar(ig,:)=zzlevbar(ig-1,:)
	711	endif
	712	ENDDO
	713
	714	endif ! moyzon
[1795]	715
[1672]	716	! -------------------------------------------------------------------------------------
[1477]	717	! Compute potential temperature
	718	! Note : Potential temperature calculation may not be the same in physiq and dynamic...
	719	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[597]	720	do l=1,nlayer
[787]	721	do ig=1,ngrid
[253]	722	zpopsk(ig,l)=(pplay(ig,l)/pplev(ig,1))**rcp
[597]	723	zh(ig,l)=pt(ig,l)/zpopsk(ig,l)
[1194]	724	mass(ig,l) = (pplev(ig,l) - pplev(ig,l+1))/glat(ig)
[1542]	725	massarea(ig,l)=mass(ig,l)*cell_area(ig)
[253]	726	enddo
	727	enddo
	728
[1312]	729	! Compute vertical velocity (m/s) from vertical mass flux
[1346]	730	! w = F / (rhoarea) and rho = P/(rT)
[1477]	731	! But first linearly interpolate mass flux to mid-layers
	732	do l=1,nlayer-1
	733	pw(1:ngrid,l)=0.5*(flxw(1:ngrid,l)+flxw(1:ngrid,l+1))
	734	enddo
	735	pw(1:ngrid,nlayer)=0.5*flxw(1:ngrid,nlayer) ! since flxw(nlayer+1)=0
	736	do l=1,nlayer
	737	pw(1:ngrid,l)=(pw(1:ngrid,l)rpt(1:ngrid,l)) / &
[1542]	738	(pplay(1:ngrid,l)*cell_area(1:ngrid))
[1477]	739	enddo
[1194]	740
[1477]	741	!---------------------------------
	742	! II. Compute radiative tendencies
	743	!---------------------------------
[253]	744
	745	if (callrad) then
[526]	746	if( mod(icount-1,iradia).eq.0.or.lastcall) then
[253]	747
[1477]	748	! Compute local stellar zenith angles
	749	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
	750	if (tlocked) then
	751	! JL14 corrects tidally resonant (and inclined) cases. nres=omega_rot/omega_orb
	752	ztim1=SIN(declin)
	753	ztim2=COS(declin)*COS(zlss)
	754	ztim3=COS(declin)*SIN(zlss)
[253]	755
[1477]	756	call stelang(ngrid,sinlon,coslon,sinlat,coslat, &
	757	ztim1,ztim2,ztim3,mu0,fract, flatten)
[253]	758
[1477]	759	elseif (diurnal) then
	760	ztim1=SIN(declin)
	761	ztim2=COS(declin)COS(2.pi*(zday-.5))
	762	ztim3=-COS(declin)SIN(2.pi*(zday-.5))
[253]	763
[1477]	764	call stelang(ngrid,sinlon,coslon,sinlat,coslat, &
	765	ztim1,ztim2,ztim3,mu0,fract, flatten)
	766	else if(diurnal .eqv. .false.) then
[253]	767
[1542]	768	call mucorr(ngrid,declin,latitude,mu0,fract,10000.,rad,flatten)
[1161]	769	! WARNING: this function appears not to work in 1D
[253]	770
[1477]	771	endif
[1161]	772
[1477]	773	! Eclipse incoming sunlight (e.g. Saturn ring shadowing).
[1429]	774	if(rings_shadow) then
	775	call call_rings(ngrid, ptime, pday, diurnal)
	776	endif
[1133]	777
[1329]	778
[1477]	779	if (corrk) then
	780
	781	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
	782	! II.a Call correlated-k radiative transfer scheme
	783	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[1297]	784
[1648]	785	call call_profilgases(nlayer)
	786
[1477]	787	! standard callcorrk
[1482]	788	call callcorrk(ngrid,nlayer,pq,nq,qsurf, &
	789	albedo,albedo_equivalent,emis,mu0,pplev,pplay,pt, &
[1788]	790	tsurf,fract,dist_star, &
[1482]	791	zdtlw,zdtsw,fluxsurf_lw,fluxsurf_sw, &
	792	fluxsurfabs_sw,fluxtop_lw, &
	793	fluxabs_sw,fluxtop_dn,OLR_nu,OSR_nu, &
[1788]	794	firstcall,lastcall)
[1297]	795
[1482]	796	! Radiative flux from the sky absorbed by the surface (W.m-2).
[1477]	797	GSR=0.0
[1482]	798	fluxrad_sky(1:ngrid)=emis(1:ngrid)*fluxsurf_lw(1:ngrid)+fluxsurfabs_sw(1:ngrid)
[253]	799
[1477]	800	!if(noradsurf)then ! no lower surface; SW flux just disappears
[1542]	801	! GSR = SUM(fluxsurf_sw(1:ngrid)*cell_area(1:ngrid))/totarea
[1477]	802	! fluxrad_sky(1:ngrid)=emis(1:ngrid)*fluxsurf_lw(1:ngrid)
	803	! print*,'SW lost in deep atmosphere = ',GSR,' W m^-2'
	804	!endif
[253]	805
[1477]	806	! Net atmospheric radiative heating rate (K.s-1)
	807	dtrad(1:ngrid,1:nlayer)=zdtsw(1:ngrid,1:nlayer)+zdtlw(1:ngrid,1:nlayer)
[1498]	808
[1477]	809	elseif(newtonian)then
[1482]	810
	811	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
	812	! II.b Call Newtonian cooling scheme
	813	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[1477]	814	call newtrelax(ngrid,nlayer,mu0,sinlat,zpopsk,pt,pplay,pplev,dtrad,firstcall)
[253]	815
[1477]	816	zdtsurf(1:ngrid) = +(pt(1:ngrid,1)-tsurf(1:ngrid))/ptimestep
	817	! e.g. surface becomes proxy for 1st atmospheric layer ?
[253]	818
[1477]	819	else
	820
	821	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
	822	! II.c Atmosphere has no radiative effect
	823	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
	824	fluxtop_dn(1:ngrid) = fract(1:ngrid)mu0(1:ngrid)Fat1AU/dist_star**2
	825	if(ngrid.eq.1)then ! / by 4 globally in 1D case...
	826	fluxtop_dn(1) = fract(1)Fat1AU/dist_star*2/2.0
	827	endif
	828	fluxsurf_sw(1:ngrid) = fluxtop_dn(1:ngrid)
[1482]	829	print*,'------------WARNING---WARNING------------' ! by MT2015.
	830	print*,'You are in corrk=false mode, '
[1498]	831	print*,'and the surface albedo is taken equal to the first visible spectral value'
	832
	833	fluxsurfabs_sw(1:ngrid) = fluxtop_dn(1:ngrid)*(1.-albedo(1:ngrid,1))
	834	fluxrad_sky(1:ngrid) = fluxsurfabs_sw(1:ngrid)
[1477]	835	fluxtop_lw(1:ngrid) = emis(1:ngrid)sigmatsurf(1:ngrid)**4
[253]	836
[1477]	837	dtrad(1:ngrid,1:nlayer)=0.0 ! no atmospheric radiative heating
[253]	838
[1477]	839	endif ! end of corrk
[253]	840
[1477]	841	endif ! of if(mod(icount-1,iradia).eq.0)
[787]	842
[253]	843
[1477]	844	! Transformation of the radiative tendencies
	845	! ------------------------------------------
	846	zplanck(1:ngrid)=tsurf(1:ngrid)*tsurf(1:ngrid)
	847	zplanck(1:ngrid)=emis(1:ngrid)sigmazplanck(1:ngrid)*zplanck(1:ngrid)
	848	fluxrad(1:ngrid)=fluxrad_sky(1:ngrid)-zplanck(1:ngrid)
	849	pdt(1:ngrid,1:nlayer)=pdt(1:ngrid,1:nlayer)+dtrad(1:ngrid,1:nlayer)
	850
	851	! Test of energy conservation
	852	!----------------------------
[253]	853	if(enertest)then
[1524]	854	call planetwide_sumval(cppmassarea(:,:)zdtsw(:,:)/totarea_planet,dEtotSW)
	855	call planetwide_sumval(cppmassarea(:,:)zdtlw(:,:)/totarea_planet,dEtotLW)
[1542]	856	!call planetwide_sumval(fluxsurf_sw(:)(1.-albedo_equivalent(:))cell_area(:)/totarea_planet,dEtotsSW) !JL13 carefull, albedo can have changed since the last time we called corrk
	857	call planetwide_sumval(fluxsurfabs_sw(:)*cell_area(:)/totarea_planet,dEtotsSW) !JL13 carefull, albedo can have changed since the last time we called corrk
	858	call planetwide_sumval((fluxsurf_lw(:)emis(:)-zplanck(:))cell_area(:)/totarea_planet,dEtotsLW)
[1524]	859	dEzRadsw(:,:)=cppmass(:,:)zdtsw(:,:)
	860	dEzRadlw(:,:)=cppmass(:,:)zdtlw(:,:)
	861	if (is_master) then
[1477]	862	print*,'---------------------------------------------------------------'
	863	print*,'In corrk SW atmospheric heating =',dEtotSW,' W m-2'
	864	print*,'In corrk LW atmospheric heating =',dEtotLW,' W m-2'
	865	print*,'atmospheric net rad heating (SW+LW) =',dEtotLW+dEtotSW,' W m-2'
	866	print*,'In corrk SW surface heating =',dEtotsSW,' W m-2'
	867	print*,'In corrk LW surface heating =',dEtotsLW,' W m-2'
	868	print*,'surface net rad heating (SW+LW) =',dEtotsLW+dEtotsSW,' W m-2'
[1524]	869	endif
[1477]	870	endif ! end of 'enertest'
[253]	871
	872	endif ! of if (callrad)
	873
	874
[1477]	875
	876	! --------------------------------------------
	877	! III. Vertical diffusion (turbulent mixing) :
	878	! --------------------------------------------
	879
[253]	880	if (calldifv) then
[526]	881
[787]	882	zflubid(1:ngrid)=fluxrad(1:ngrid)+fluxgrd(1:ngrid)
[253]	883
[1477]	884	! JL12 the following if test is temporarily there to allow us to compare the old vdifc with turbdiff.
[1524]	885	if (UseTurbDiff) then
	886
[1647]	887	call turbdiff(ngrid,nlayer,nq, &
[1477]	888	ptimestep,capcal,lwrite, &
	889	pplay,pplev,zzlay,zzlev,z0, &
	890	pu,pv,pt,zpopsk,pq,tsurf,emis,qsurf, &
	891	pdt,pdq,zflubid, &
	892	zdudif,zdvdif,zdtdif,zdtsdif, &
[1647]	893	sensibFlux,q2,zdqdif,zdqsdif, &
[1477]	894	taux,tauy,lastcall)
[594]	895
[1524]	896	else
	897
[1477]	898	zdh(1:ngrid,1:nlayer)=pdt(1:ngrid,1:nlayer)/zpopsk(1:ngrid,1:nlayer)
[594]	899
[1647]	900	call vdifc(ngrid,nlayer,nq,zpopsk, &
[1477]	901	ptimestep,capcal,lwrite, &
	902	pplay,pplev,zzlay,zzlev,z0, &
	903	pu,pv,zh,pq,tsurf,emis,qsurf, &
	904	zdh,pdq,zflubid, &
	905	zdudif,zdvdif,zdhdif,zdtsdif, &
[1524]	906	sensibFlux,q2,zdqdif,zdqsdif, &
[1477]	907	taux,tauy,lastcall)
[253]	908
[1477]	909	zdtdif(1:ngrid,1:nlayer)=zdhdif(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer) ! for diagnostic only
[1524]	910	zdqevap(1:ngrid,1:nlayer)=0.
[594]	911
[1477]	912	end if !end of 'UseTurbDiff'
[594]	913
[1477]	914
[1308]	915	pdv(1:ngrid,1:nlayer)=pdv(1:ngrid,1:nlayer)+zdvdif(1:ngrid,1:nlayer)
	916	pdu(1:ngrid,1:nlayer)=pdu(1:ngrid,1:nlayer)+zdudif(1:ngrid,1:nlayer)
	917	pdt(1:ngrid,1:nlayer)=pdt(1:ngrid,1:nlayer)+zdtdif(1:ngrid,1:nlayer)
[787]	918	zdtsurf(1:ngrid)=zdtsurf(1:ngrid)+zdtsdif(1:ngrid)
[1297]	919
[253]	920	if (tracer) then
[1308]	921	pdq(1:ngrid,1:nlayer,1:nq)=pdq(1:ngrid,1:nlayer,1:nq)+ zdqdif(1:ngrid,1:nlayer,1:nq)
[787]	922	dqsurf(1:ngrid,1:nq)=dqsurf(1:ngrid,1:nq) + zdqsdif(1:ngrid,1:nq)
[253]	923	end if ! of if (tracer)
	924
[1477]	925
	926	! test energy conservation
[253]	927	!-------------------------
	928	if(enertest)then
[1477]	929
[1524]	930	dEzdiff(:,:)=cppmass(:,:)zdtdif(:,:)
[253]	931	do ig = 1, ngrid
[1524]	932	dEdiff(ig)=SUM(dEzdiff (ig,:))+ sensibFlux(ig)! subtract flux to the ground
	933	dEzdiff(ig,1)= dEzdiff(ig,1)+ sensibFlux(ig)! subtract flux to the ground
[253]	934	enddo
[1477]	935
[1542]	936	call planetwide_sumval(dEdiff(:)*cell_area(:)/totarea_planet,dEtot)
[1524]	937	dEdiffs(:)=capcal(:)*zdtsdif(:)-zflubid(:)-sensibFlux(:)
[1542]	938	call planetwide_sumval(dEdiffs(:)*cell_area(:)/totarea_planet,dEtots)
	939	call planetwide_sumval(sensibFlux(:)*cell_area(:)/totarea_planet,AtmToSurf_TurbFlux)
[1477]	940
[1524]	941	if (is_master) then
[1477]	942
	943	if (UseTurbDiff) then
[1524]	944	print*,'In TurbDiff sensible flux (atm=>surf) =',AtmToSurf_TurbFlux,' W m-2'
	945	print*,'In TurbDiff non-cons atm nrj change =',dEtot,' W m-2'
[1477]	946	print*,'In TurbDiff (correc rad+latent heat) surf nrj change =',dEtots,' W m-2'
[1524]	947	else
	948	print*,'In vdifc sensible flux (atm=>surf) =',AtmToSurf_TurbFlux,' W m-2'
	949	print*,'In vdifc non-cons atm nrj change =',dEtot,' W m-2'
	950	print*,'In vdifc (correc rad+latent heat) surf nrj change =',dEtots,' W m-2'
	951	end if
	952	endif ! end of 'is_master'
[1477]	953
	954	! JL12 : note that the black body radiative flux emitted by the surface has been updated by the implicit scheme but not given back elsewhere.
	955	endif ! end of 'enertest'
[253]	956
[1477]	957	else ! calldifv
[253]	958
	959	if(.not.newtonian)then
	960
[787]	961	zdtsurf(1:ngrid) = zdtsurf(1:ngrid) + (fluxrad(1:ngrid) + fluxgrd(1:ngrid))/capcal(1:ngrid)
[253]	962
	963	endif
	964
[1477]	965	endif ! end of 'calldifv'
[253]	966
	967
[1477]	968	!----------------------------------
	969	! IV. Dry convective adjustment :
	970	!----------------------------------
[253]	971
	972	if(calladj) then
	973
[1308]	974	zdh(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer)/zpopsk(1:ngrid,1:nlayer)
	975	zduadj(1:ngrid,1:nlayer)=0.0
	976	zdvadj(1:ngrid,1:nlayer)=0.0
	977	zdhadj(1:ngrid,1:nlayer)=0.0
[253]	978
	979
[1477]	980	call convadj(ngrid,nlayer,nq,ptimestep, &
	981	pplay,pplev,zpopsk, &
	982	pu,pv,zh,pq, &
	983	pdu,pdv,zdh,pdq, &
	984	zduadj,zdvadj,zdhadj, &
	985	zdqadj)
[253]	986
[1308]	987	pdu(1:ngrid,1:nlayer) = pdu(1:ngrid,1:nlayer) + zduadj(1:ngrid,1:nlayer)
	988	pdv(1:ngrid,1:nlayer) = pdv(1:ngrid,1:nlayer) + zdvadj(1:ngrid,1:nlayer)
	989	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer) + zdhadj(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer)
	990	zdtadj(1:ngrid,1:nlayer) = zdhadj(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer) ! for diagnostic only
[1283]	991
[253]	992	if(tracer) then
[1308]	993	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + zdqadj(1:ngrid,1:nlayer,1:nq)
[253]	994	end if
	995
[1477]	996	! Test energy conservation
[253]	997	if(enertest)then
[1524]	998	call planetwide_sumval(cppmassarea(:,:)zdtadj(:,:)/totarea_planet,dEtot)
[1295]	999	if (is_master) print*,'In convadj atmospheric energy change =',dEtot,' W m-2'
[253]	1000	endif
	1001
[787]	1002
[1477]	1003	endif ! end of 'calladj'
	1004
[253]	1005
[1477]	1006	!---------------------------------------------
[1647]	1007	! V. Specific parameterizations for tracers
[1477]	1008	!---------------------------------------------
[253]	1009
[1477]	1010	if (tracer) then
	1011
[1672]	1012	! -------------------------
	1013	! V.1. Chemistry
	1014	! -------------------------
[1795]	1015
[1672]	1016	if (callchim) then
	1017
[1795]	1018	! Using zonal mean for calchim
[1672]	1019	zplev(:,:) = zplevbar(:,:)
	1020	zplay(:,:) = zplaybar(:,:)
	1021	zzlev(:,:) = zzlevbar(:,:)
	1022	zzlay(:,:) = zzlaybar(:,:)
	1023	ztemp(:,:) = ztfibar(:,:)
	1024
	1025	if (nq.gt.nmicro) then
	1026	do iq = nmicro+1,nq
[1787]	1027	ychim(:,:,iq-nmicro) = pq(:,:,iq) * rat_mmol(iq) ! convert to molar fraction
[1672]	1028	enddo
	1029	endif
	1030
	1031	! Condensation tendency after the transport
[1795]	1032	do iq=nmicro+1,nq
[1672]	1033	do l=1,nlayer
	1034	do ig=1,ngrid
[1795]	1035	if ( ychim(ig,l,iq-nmicro).gt.qysat(l,iq-nmicro) ) then
	1036	dyccond(ig,l,iq)= ( -ychim(ig,l,iq-nmicro)+qysat(l,iq-nmicro) ) / ptimestep
[1672]	1037	endif
	1038	enddo
	1039	enddo
	1040	enddo
	1041
[1795]	1042	if ( callclouds ) dyccond(:,:,ices_indx) = 0.0 ! Condensation will be calculated in the cloud microphysics
	1043
	1044	if( mod(icount-1,ichim).eq.0. ) then
[1672]	1045
[1795]	1046	print *, "We enter in the chemistry ..."
[1672]	1047	call calchim(ngrid,nq-nmicro,ychim,nomqy,declin,zls,ctimestep, &
	1048	ztemp,zplay,zplev,zzlay,zzlev,dycchi,nlayer+70)
	1049
	1050	! JVO 2017 : NLEV = nlayer+70, en accord avec le C. Quid si nlay=/ 55 ?
	1051
	1052	endif
	1053
[1795]	1054	! TEMPORARY COMMENT
	1055	! These conversions as well as 2D/1D should be put in phytrac
	1056	! ( GCM-friendly tracers and tendencies -> format for photochem and microphys )
	1057
[1672]	1058	if (nq.gt.nmicro) then
[1795]	1059	! We convert tendencies to mass mixing ratio
[1672]	1060	do iq=nmicro+1,nq
[1795]	1061	zdqchi(:,:,iq) = dycchi(:,:,iq-nmicro) / rat_mmol(iq)
	1062	zdqcond(:,:,iq) = dyccond(:,:,iq) / rat_mmol(iq)
[1672]	1063	enddo
	1064
	1065	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + &
[1795]	1066	zdqchi(1:ngrid,1:nlayer,1:nq) + zdqcond(1:ngrid,1:nlayer,1:nq)
[1672]	1067
	1068	endif
	1069
[1795]	1070	endif ! end of 'callchim'
	1071
	1072	! -------------------
	1073	! V.2 Microphysics
	1074	! -------------------
	1075
	1076	if (callmufi) then
	1077
	1078	! Using zonal mean for microphysics
	1079	zplev(:,:) = zplevbar(:,:)
	1080	zplay(:,:) = zplaybar(:,:)
	1081	zzlev(:,:) = zzlevbar(:,:)
	1082	zzlay(:,:) = zzlaybar(:,:)
	1083	ztemp(:,:) = ztfibar(:,:)
	1084
	1085	! Inside this routine we will split 2D->1D, intensive->extensive and separate different types of tracers
	1086	! Should be put in phytrac
	1087
	1088	call calmufi(zplev,zzlev,zplay,zzlay,ztemp,pq,zdqmufi)
	1089
	1090	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + zdqmufi(1:ngrid,1:nlayer,1:nq)
	1091
	1092	endif ! end of 'callmufi'
[1647]	1093
[1477]	1094	! ---------------
[1672]	1095	! V.3 Updates
[1477]	1096	! ---------------
[253]	1097
[1477]	1098	! Updating Atmospheric Mass and Tracers budgets.
[728]	1099	if(mass_redistrib) then
	1100
[1647]	1101	zdmassmr(1:ngrid,1:nlayer) = mass(1:ngrid,1:nlayer) * zdqevap(1:ngrid,1:nlayer)
[863]	1102
	1103	do ig = 1, ngrid
[1524]	1104	zdmassmr_col(ig)=SUM(zdmassmr(ig,1:nlayer))
[863]	1105	enddo
[728]	1106
[1524]	1107	call writediagfi(ngrid,"mass_evap","mass gain"," ",3,zdmassmr)
	1108	call writediagfi(ngrid,"mass_evap_col","mass gain col"," ",2,zdmassmr_col)
	1109	call writediagfi(ngrid,"mass","mass","kg/m2",3,mass)
[728]	1110
[1524]	1111	call mass_redistribution(ngrid,nlayer,nq,ptimestep, &
[1647]	1112	capcal,pplay,pplev,pt,tsurf,pq,qsurf, &
[1524]	1113	pu,pv,pdt,zdtsurf,pdq,pdu,pdv,zdmassmr, &
	1114	zdtmr,zdtsurfmr,zdpsrfmr,zdumr,zdvmr,zdqmr,zdqsurfmr)
	1115
[1308]	1116	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + zdqmr(1:ngrid,1:nlayer,1:nq)
[1477]	1117	dqsurf(1:ngrid,1:nq) = dqsurf(1:ngrid,1:nq) + zdqsurfmr(1:ngrid,1:nq)
	1118	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer) + zdtmr(1:ngrid,1:nlayer)
	1119	pdu(1:ngrid,1:nlayer) = pdu(1:ngrid,1:nlayer) + zdumr(1:ngrid,1:nlayer)
	1120	pdv(1:ngrid,1:nlayer) = pdv(1:ngrid,1:nlayer) + zdvmr(1:ngrid,1:nlayer)
[1524]	1121	pdpsrf(1:ngrid) = pdpsrf(1:ngrid) + zdpsrfmr(1:ngrid)
[1477]	1122	zdtsurf(1:ngrid) = zdtsurf(1:ngrid) + zdtsurfmr(1:ngrid)
[1524]	1123
	1124	endif
[728]	1125
[1477]	1126	! -----------------------------
[1672]	1127	! V.4. Surface Tracer Update
[1477]	1128	! -----------------------------
[1297]	1129
[1647]	1130	qsurf(1:ngrid,1:nq) = qsurf(1:ngrid,1:nq) + ptimestep*dqsurf(1:ngrid,1:nq)
[253]	1131
[1477]	1132	! Add qsurf to qsurf_hist, which is what we save in diagfi.nc. At the same time, we set the water
	1133	! content of ocean gridpoints back to zero, in order to avoid rounding errors in vdifc, rain.
[622]	1134	qsurf_hist(:,:) = qsurf(:,:)
[253]	1135
[1477]	1136	endif! end of if 'tracer'
[253]	1137
	1138
[1477]	1139	!------------------------------------------------
[1647]	1140	! VI. Surface and sub-surface soil temperature
[1477]	1141	!------------------------------------------------
[253]	1142
[1477]	1143
	1144	! Increment surface temperature
[1297]	1145
[1647]	1146	tsurf(1:ngrid)=tsurf(1:ngrid)+ptimestep*zdtsurf(1:ngrid)
[1477]	1147
	1148	! Compute soil temperatures and subsurface heat flux.
[253]	1149	if (callsoil) then
[787]	1150	call soil(ngrid,nsoilmx,.false.,lastcall,inertiedat, &
[1477]	1151	ptimestep,tsurf,tsoil,capcal,fluxgrd)
[253]	1152	endif
	1153
[1297]	1154
[1477]	1155	! Test energy conservation
[253]	1156	if(enertest)then
[1542]	1157	call planetwide_sumval(cell_area(:)capcal(:)zdtsurf(:)/totarea_planet,dEtots)
[1524]	1158	if (is_master) print*,'Surface energy change =',dEtots,' W m-2'
[253]	1159	endif
	1160
	1161
[1477]	1162	!---------------------------------------------------
[1647]	1163	! VII. Perform diagnostics and write output files
[1477]	1164	!---------------------------------------------------
	1165
	1166	! Note : For output only: the actual model integration is performed in the dynamics.
	1167
	1168
[253]	1169
[1477]	1170	! Temperature, zonal and meridional winds.
[1308]	1171	zt(1:ngrid,1:nlayer) = pt(1:ngrid,1:nlayer) + pdt(1:ngrid,1:nlayer)*ptimestep
	1172	zu(1:ngrid,1:nlayer) = pu(1:ngrid,1:nlayer) + pdu(1:ngrid,1:nlayer)*ptimestep
	1173	zv(1:ngrid,1:nlayer) = pv(1:ngrid,1:nlayer) + pdv(1:ngrid,1:nlayer)*ptimestep
[253]	1174
[1477]	1175	! Diagnostic.
[1637]	1176	zdtdyn(1:ngrid,1:nlayer) = (pt(1:ngrid,1:nlayer)-ztprevious(1:ngrid,1:nlayer)) / ptimestep
[1308]	1177	ztprevious(1:ngrid,1:nlayer) = zt(1:ngrid,1:nlayer)
[253]	1178
[1637]	1179	zdudyn(1:ngrid,1:nlayer) = (pu(1:ngrid,1:nlayer)-zuprevious(1:ngrid,1:nlayer)) / ptimestep
	1180	zuprevious(1:ngrid,1:nlayer) = zu(1:ngrid,1:nlayer)
	1181
[253]	1182	if(firstcall)then
[1308]	1183	zdtdyn(1:ngrid,1:nlayer)=0.0
[1637]	1184	zdudyn(1:ngrid,1:nlayer)=0.0
[253]	1185	endif
	1186
[1477]	1187	! Dynamical heating diagnostic.
[253]	1188	do ig=1,ngrid
[1637]	1189	fluxdyn(ig)= SUM(zdtdyn(ig,:) mass(ig,:))cpp
[253]	1190	enddo
	1191
[1477]	1192	! Tracers.
[1308]	1193	zq(1:ngrid,1:nlayer,1:nq) = pq(1:ngrid,1:nlayer,1:nq) + pdq(1:ngrid,1:nlayer,1:nq)*ptimestep
[253]	1194
[1477]	1195	! Surface pressure.
[787]	1196	ps(1:ngrid) = pplev(1:ngrid,1) + pdpsrf(1:ngrid)*ptimestep
[253]	1197
	1198
	1199
[1477]	1200	! Surface and soil temperature information
[1542]	1201	call planetwide_sumval(cell_area(:)*tsurf(:)/totarea_planet,Ts1)
[1295]	1202	call planetwide_minval(tsurf(:),Ts2)
	1203	call planetwide_maxval(tsurf(:),Ts3)
[253]	1204	if(callsoil)then
[1542]	1205	TsS = SUM(cell_area(:)*tsoil(:,nsoilmx))/totarea ! mean temperature at bottom soil layer
[1722]	1206	if (is_master) then
	1207	print*,' ave[Tsurf] min[Tsurf] max[Tsurf] ave[Tdeep]'
	1208	print*,Ts1,Ts2,Ts3,TsS
	1209	end if
[959]	1210	else
[1722]	1211	if (is_master) then
	1212	print*,' ave[Tsurf] min[Tsurf] max[Tsurf]'
[1477]	1213	print*,Ts1,Ts2,Ts3
[1524]	1214	endif
[959]	1215	end if
[253]	1216
	1217
[1477]	1218	! Check the energy balance of the simulation during the run
[253]	1219	if(corrk)then
	1220
[1542]	1221	call planetwide_sumval(cell_area(:)*fluxtop_dn(:)/totarea_planet,ISR)
	1222	call planetwide_sumval(cell_area(:)*fluxabs_sw(:)/totarea_planet,ASR)
	1223	call planetwide_sumval(cell_area(:)*fluxtop_lw(:)/totarea_planet,OLR)
	1224	call planetwide_sumval(cell_area(:)*fluxgrd(:)/totarea_planet,GND)
	1225	call planetwide_sumval(cell_area(:)*fluxdyn(:)/totarea_planet,DYN)
[787]	1226	do ig=1,ngrid
[253]	1227	if(fluxtop_dn(ig).lt.0.0)then
	1228	print*,'fluxtop_dn has gone crazy'
	1229	print*,'fluxtop_dn=',fluxtop_dn(ig)
	1230	print*,'temp= ',pt(ig,:)
	1231	print*,'pplay= ',pplay(ig,:)
	1232	call abort
	1233	endif
	1234	end do
	1235
[787]	1236	if(ngrid.eq.1)then
[253]	1237	DYN=0.0
	1238	endif
[1524]	1239
	1240	if (is_master) then
[1477]	1241	print*,' ISR ASR OLR GND DYN [W m^-2]'
	1242	print*, ISR,ASR,OLR,GND,DYN
[1524]	1243	endif
[253]	1244
[1295]	1245	if(enertest .and. is_master)then
[651]	1246	print*,'SW flux/heating difference SW++ - ASR = ',dEtotSW+dEtotsSW-ASR,' W m-2'
	1247	print*,'LW flux/heating difference LW++ - OLR = ',dEtotLW+dEtotsLW+OLR,' W m-2'
	1248	print*,'LW energy balance LW++ + ASR = ',dEtotLW+dEtotsLW+ASR,' W m-2'
[253]	1249	endif
	1250
[1295]	1251	if(meanOLR .and. is_master)then
[1216]	1252	if((ngrid.gt.1) .or. (mod(icount-1,ecritphy).eq.0))then
[253]	1253	! to record global radiative balance
[588]	1254	open(92,file="rad_bal.out",form='formatted',position='append')
[651]	1255	write(92,*) zday,ISR,ASR,OLR
[253]	1256	close(92)
[588]	1257	open(93,file="tem_bal.out",form='formatted',position='append')
[1295]	1258	if(callsoil)then
[1524]	1259	write(93,*) zday,Ts1,Ts2,Ts3,TsS
	1260	else
	1261	write(93,*) zday,Ts1,Ts2,Ts3
	1262	endif
[253]	1263	close(93)
	1264	endif
	1265	endif
	1266
[1477]	1267	endif ! end of 'corrk'
[253]	1268
[651]	1269
[1477]	1270	! Diagnostic to test radiative-convective timescales in code.
[253]	1271	if(testradtimes)then
[588]	1272	open(38,file="tau_phys.out",form='formatted',position='append')
[253]	1273	ig=1
	1274	do l=1,nlayer
	1275	write(38,*) -1./pdt(ig,l),pt(ig,l),pplay(ig,l)
	1276	enddo
	1277	close(38)
[726]	1278	print*,'As testradtimes enabled,'
	1279	print*,'exiting physics on first call'
[253]	1280	call abort
	1281	endif
	1282
[1477]	1283
[1722]	1284	if (is_master) print,'--> Ls =',zls180./pi
[1477]	1285
	1286
	1287	!----------------------------------------------------------------------
[253]	1288	! Writing NetCDF file "RESTARTFI" at the end of the run
[1477]	1289	!----------------------------------------------------------------------
	1290
[253]	1291	! Note: 'restartfi' is stored just before dynamics are stored
	1292	! in 'restart'. Between now and the writting of 'restart',
	1293	! there will have been the itau=itau+1 instruction and
	1294	! a reset of 'time' (lastacll = .true. when itau+1= itaufin)
	1295	! thus we store for time=time+dtvr
	1296
	1297
	1298
[1477]	1299	if(lastcall) then
	1300	ztime_fin = ptime + ptimestep/(float(iphysiq)*daysec)
[305]	1301
[1477]	1302	if (ngrid.ne.1) then
	1303	write(,)'PHYSIQ: for physdem ztime_fin =',ztime_fin
	1304
	1305	call physdem1("restartfi.nc",nsoilmx,ngrid,nlayer,nq, &
	1306	ptimestep,ztime_fin, &
[1789]	1307	tsurf,tsoil,emis,q2,qsurf_hist,tankCH4)
[1477]	1308	endif
[1216]	1309
[1477]	1310	endif ! end of 'lastcall'
[253]	1311
[861]	1312
[1477]	1313	!-----------------------------------
[253]	1314	! Saving statistics :
[1477]	1315	!-----------------------------------
[253]	1316
[1477]	1317	! Note :("stats" stores and accumulates 8 key variables in file "stats.nc"
	1318	! which can later be used to make the statistic files of the run:
	1319	! "stats") only possible in 3D runs !!!
	1320
[253]	1321
[1477]	1322	if (callstats) then
[253]	1323
[1477]	1324	call wstats(ngrid,"ps","Surface pressure","Pa",2,ps)
	1325	call wstats(ngrid,"tsurf","Surface temperature","K",2,tsurf)
	1326	call wstats(ngrid,"fluxsurf_lw", &
	1327	"Thermal IR radiative flux to surface","W.m-2",2, &
	1328	fluxsurf_lw)
	1329	call wstats(ngrid,"fluxtop_lw", &
	1330	"Thermal IR radiative flux to space","W.m-2",2, &
	1331	fluxtop_lw)
	1332
[253]	1333	! call wstats(ngrid,"fluxsurf_sw", &
	1334	! "Solar radiative flux to surface","W.m-2",2, &
[1477]	1335	! fluxsurf_sw_tot)
[253]	1336	! call wstats(ngrid,"fluxtop_sw", &
	1337	! "Solar radiative flux to space","W.m-2",2, &
	1338	! fluxtop_sw_tot)
[526]	1339
[253]	1340
[1477]	1341	call wstats(ngrid,"ISR","incoming stellar rad.","W m-2",2,fluxtop_dn)
	1342	call wstats(ngrid,"ASR","absorbed stellar rad.","W m-2",2,fluxabs_sw)
	1343	call wstats(ngrid,"OLR","outgoing longwave rad.","W m-2",2,fluxtop_lw)
[1482]	1344	!call wstats(ngrid,"ALB","Surface albedo"," ",2,albedo_equivalent)
	1345	!call wstats(ngrid,"ALB_1st","First Band Surface albedo"," ",2,albedo(:,1))
[1477]	1346	call wstats(ngrid,"p","Pressure","Pa",3,pplay)
	1347	call wstats(ngrid,"temp","Atmospheric temperature","K",3,zt)
	1348	call wstats(ngrid,"u","Zonal (East-West) wind","m.s-1",3,zu)
	1349	call wstats(ngrid,"v","Meridional (North-South) wind","m.s-1",3,zv)
	1350	call wstats(ngrid,"w","Vertical (down-up) wind","m.s-1",3,pw)
	1351	call wstats(ngrid,"q2","Boundary layer eddy kinetic energy","m2.s-2",3,q2)
[526]	1352
[1477]	1353	if (tracer) then
	1354	do iq=1,nq
	1355	call wstats(ngrid,noms(iq),noms(iq),'kg/kg',3,zq(1,1,iq))
	1356	call wstats(ngrid,trim(noms(iq))//'_surf',trim(noms(iq))//'_surf', &
	1357	'kg m^-2',2,qsurf(1,iq) )
	1358
	1359	! call wstats(ngrid,trim(noms(iq))//'_reff', &
[726]	1360	! trim(noms(iq))//'_reff', &
	1361	! 'm',3,reffrad(1,1,iq))
[1477]	1362
	1363	end do
[253]	1364
[1477]	1365	endif ! end of 'tracer'
[253]	1366
[1477]	1367	if(lastcall) then
	1368	write (,) "Writing stats..."
	1369	call mkstats(ierr)
	1370	endif
	1371
	1372	endif ! end of 'callstats'
[253]	1373
	1374
[1477]	1375	!-----------------------------------------------------------------------------------------------------
	1376	! OUTPUT in netcdf file "DIAGFI.NC", containing any variable for diagnostic
	1377	!
	1378	! Note 1 : output with period "ecritphy", set in "run.def"
	1379	!
	1380	! Note 2 : writediagfi can also be called from any other subroutine for any variable,
	1381	! but its preferable to keep all the calls in one place ...
	1382	!-----------------------------------------------------------------------------------------------------
[253]	1383
	1384
[1477]	1385	call writediagfi(ngrid,"Ls","solar longitude","deg",0,zls*180./pi)
	1386	call writediagfi(ngrid,"Lss","sub solar longitude","deg",0,zlss*180./pi)
	1387	call writediagfi(ngrid,"RA","right ascension","deg",0,right_ascen*180./pi)
	1388	call writediagfi(ngrid,"Declin","solar declination","deg",0,declin*180./pi)
	1389	call writediagfi(ngrid,"tsurf","Surface temperature","K",2,tsurf)
	1390	call writediagfi(ngrid,"ps","Surface pressure","Pa",2,ps)
	1391	call writediagfi(ngrid,"temp","temperature","K",3,zt)
	1392	call writediagfi(ngrid,"teta","potential temperature","K",3,zh)
	1393	call writediagfi(ngrid,"u","Zonal wind","m.s-1",3,zu)
	1394	call writediagfi(ngrid,"v","Meridional wind","m.s-1",3,zv)
	1395	call writediagfi(ngrid,"w","Vertical wind","m.s-1",3,pw)
	1396	call writediagfi(ngrid,"p","Pressure","Pa",3,pplay)
	1397
[965]	1398	! Subsurface temperatures
[969]	1399	! call writediagsoil(ngrid,"tsurf","Surface temperature","K",2,tsurf)
	1400	! call writediagsoil(ngrid,"temp","temperature","K",3,tsoil)
[965]	1401
[1477]	1402
[1297]	1403
[1477]	1404	! Total energy balance diagnostics
	1405	if(callrad.and.(.not.newtonian))then
	1406
[1482]	1407	!call writediagfi(ngrid,"ALB","Surface albedo"," ",2,albedo_equivalent)
[1477]	1408	call writediagfi(ngrid,"ISR","incoming stellar rad.","W m-2",2,fluxtop_dn)
	1409	call writediagfi(ngrid,"ASR","absorbed stellar rad.","W m-2",2,fluxabs_sw)
	1410	call writediagfi(ngrid,"OLR","outgoing longwave rad.","W m-2",2,fluxtop_lw)
	1411
[1016]	1412	! call writediagfi(ngrid,"ASRcs","absorbed stellar rad (cs).","W m-2",2,fluxabs_sw1)
	1413	! call writediagfi(ngrid,"OLRcs","outgoing longwave rad (cs).","W m-2",2,fluxtop_lw1)
	1414	! call writediagfi(ngrid,"fluxsurfsw","sw surface flux.","W m-2",2,fluxsurf_sw)
	1415	! call writediagfi(ngrid,"fluxsurflw","lw back radiation.","W m-2",2,fluxsurf_lw)
	1416	! call writediagfi(ngrid,"fluxsurfswcs","sw surface flux (cs).","W m-2",2,fluxsurf_sw1)
	1417	! call writediagfi(ngrid,"fluxsurflwcs","lw back radiation (cs).","W m-2",2,fluxsurf_lw1)
[1477]	1418
[1647]	1419
	1420	call writediagfi(ngrid,"GND","heat flux from ground","W m-2",2,fluxgrd)
[1477]	1421
	1422	call writediagfi(ngrid,"DYN","dynamical heat input","W m-2",2,fluxdyn)
	1423
	1424	endif ! end of 'callrad'
[1524]	1425
[1477]	1426	if(enertest) then
	1427
[1524]	1428	if (calldifv) then
[1477]	1429
[1524]	1430	call writediagfi(ngrid,"q2","turbulent kinetic energy","J.kg^-1",3,q2)
[1477]	1431	call writediagfi(ngrid,"sensibFlux","sensible heat flux","w.m^-2",2,sensibFlux)
	1432
[1524]	1433	! call writediagfi(ngrid,"dEzdiff","turbulent diffusion heating (-sensible flux)","w.m^-2",3,dEzdiff)
	1434	! call writediagfi(ngrid,"dEdiff","integrated turbulent diffusion heating (-sensible flux)","w.m^-2",2,dEdiff)
	1435	! call writediagfi(ngrid,"dEdiffs","In TurbDiff (correc rad+latent heat) surf nrj change","w.m^-2",2,dEdiffs)
	1436
	1437	endif
[1477]	1438
[1524]	1439	if (corrk) then
	1440	call writediagfi(ngrid,"dEzradsw","radiative heating","w.m^-2",3,dEzradsw)
	1441	call writediagfi(ngrid,"dEzradlw","radiative heating","w.m^-2",3,dEzradlw)
	1442	endif
[1477]	1443
	1444	endif ! end of 'enertest'
[253]	1445
[1663]	1446	! Temporary inclusions for winds diagnostics.
	1447	call writediagfi(ngrid,"zdudif","Turbdiff tend. zon. wind","m s-2",3,zdudif)
	1448	call writediagfi(ngrid,"zdudyn","Dyn. tend. zon. wind","m s-2",3,zdudyn)
[1477]	1449
	1450	! Temporary inclusions for heating diagnostics.
[1663]	1451	call writediagfi(ngrid,"zdtsw","SW heating","T s-1",3,zdtsw)
	1452	call writediagfi(ngrid,"zdtlw","LW heating","T s-1",3,zdtlw)
	1453	call writediagfi(ngrid,"dtrad","radiative heating","K s-1",3,dtrad)
	1454	call writediagfi(ngrid,"zdtdyn","Dyn. heating","T s-1",3,zdtdyn)
[1477]	1455
	1456	! For Debugging.
[1663]	1457	call writediagfi(ngrid,'pphi','Geopotential',' ',3,pphi)
[1477]	1458
[253]	1459
[1477]	1460	! Output tracers.
	1461	if (tracer) then
[1808]	1462
[1795]	1463	if (callmufi) then ! For now we assume an given order for tracers !
	1464	call writediagfi(ngrid,"mu_m0as","Spherical mode 0th order moment",'kg/kg',3,zq(:,:,1))
	1465	call writediagfi(ngrid,"mu_m3as","Spherical mode 3rd order moment",'kg/kg',3,zq(:,:,2))
	1466	call writediagfi(ngrid,"mu_m0af","Fractal mode 0th order moment",'kg/kg',3,zq(:,:,3))
	1467	call writediagfi(ngrid,"mu_m3af","Fractal mode 3rd order moment",'kg/kg',3,zq(:,:,4))
	1468	endif ! end of 'callmufi'
[253]	1469
[1808]	1470	if ( callchim .and. (.not. callmufi) ) then
	1471	call writediagfi(ngrid,"C2H2","C2H2",'kg/kg',3,zq(:,:,10))
	1472	call writediagfi(ngrid,"C2H4","C2H4",'kg/kg',3,zq(:,:,12))
	1473	call writediagfi(ngrid,"C2H6","C2H6",'kg/kg',3,zq(:,:,14))
	1474	call writediagfi(ngrid,"C4H2","C4H2",'kg/kg',3,zq(:,:,26))
	1475	call writediagfi(ngrid,"HCN","HCN",'kg/kg',3,zq(:,:,36))
	1476	call writediagfi(ngrid,"HC3N","HC3N",'kg/kg',3,zq(:,:,42))
	1477	else if ( callchim .and. callmufi ) then
[1809]	1478	call writediagfi(ngrid,"C2H2","C2H2",'kg/kg',3,zq(:,:,14))
	1479	call writediagfi(ngrid,"C2H4","C2H4",'kg/kg',3,zq(:,:,16))
	1480	call writediagfi(ngrid,"C2H6","C2H6",'kg/kg',3,zq(:,:,18))
	1481	call writediagfi(ngrid,"C4H2","C4H2",'kg/kg',3,zq(:,:,30))
	1482	call writediagfi(ngrid,"HCN","HCN",'kg/kg',3,zq(:,:,40))
	1483	call writediagfi(ngrid,"HC3N","HC3N",'kg/kg',3,zq(:,:,46))
[1808]	1484	endif
	1485
[1477]	1486	endif ! end of 'tracer'
[253]	1487
[1622]	1488	! XIOS outputs
	1489	#ifdef CPP_XIOS
	1490	! Send fields to XIOS: (NB these fields must also be defined as
	1491	! <field id="..." /> in context_lmdz_physics.xml to be correctly used)
[1626]	1492	CALL send_xios_field("ls",zls)
	1493
[1622]	1494	CALL send_xios_field("ps",ps)
	1495	CALL send_xios_field("area",cell_area)
	1496
	1497	CALL send_xios_field("temperature",zt)
	1498	CALL send_xios_field("u",zu)
	1499	CALL send_xios_field("v",zv)
	1500
	1501	#endif
	1502
[253]	1503	icount=icount+1
	1504
[751]	1505	end subroutine physiq
[1549]	1506
	1507	end module physiq_mod

Note: See TracBrowser for help on using the repository browser.

Download in other formats:

Original Format