| 1 | <!-- xml example for start_archive2icosa.e --> |
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| 2 | <?xml version="1.0"?> |
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| 3 | <simulation> |
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| 4 | |
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| 5 | <context id="test"> |
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| 6 | <calendar type="Gregorian" |
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| 7 | start_date="2012-03-01 15:00:00" |
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| 8 | time_origin="2012-02-29 15:00:00" /> |
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| 9 | |
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| 10 | <field_definition level="1" > |
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| 11 | <field_group id="fields_2D_dst" domain_ref="src_domain_regular_clean" > |
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| 12 | <!-- 2D fields --> |
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| 13 | <field id="ps_clean" /> |
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| 14 | <!-- 2D fields --> |
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| 15 | <field id="tsurf_clean" /> |
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| 16 | <field id="emis_clean" /> |
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| 17 | <field id="ZMEA_clean" /> |
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| 18 | <field id="ZSTD_clean" /> |
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| 19 | <field id="ZSIG_clean" /> |
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| 20 | <field id="ZGAM_clean" /> |
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| 21 | <field id="ZTHE_clean" /> |
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| 22 | <field id="albedodat_clean" /> |
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| 23 | |
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| 24 | <!-- 2D fields associated to tracers--> |
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| 25 | <field id="n2_surf_clean" /> |
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| 26 | <field id="co_ice_surf_clean" /> |
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| 27 | <field id="co_gas_surf_clean" /> |
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| 28 | <field id="ch4_ice_surf_clean" /> |
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| 29 | <field id="ch4_gas_surf_clean" /> |
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| 30 | <field id="prec_haze_surf_clean" /> |
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| 31 | <field id="haze_surf_clean" /> |
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| 32 | </field_group> |
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| 33 | <!-- --> |
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| 34 | <field_group id="fields_dst"> |
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| 35 | <!-- from topography file --> |
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| 36 | <field id="topo" domain_ref="src_topo_domain_regular" /> |
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| 37 | <!-- 3D fields --> |
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| 38 | <field id="temp_clean" |
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| 39 | grid_ref="src_grid_regular_clean" /> |
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| 40 | <field id="theta_rhodz_clean" |
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| 41 | grid_ref="src_grid_regular_clean" /> |
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| 42 | <field id="u_clean" grid_ref="src_grid_regular_clean" /> |
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| 43 | <field id="v_clean" grid_ref="src_grid_regular_clean" /> |
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| 44 | <!-- tracers --> |
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| 45 | <field id="n2_clean" grid_ref="src_grid_regular_clean" /> |
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| 46 | <field id="co_ice_clean" grid_ref="src_grid_regular_clean" /> |
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| 47 | <field id="co_gas_clean" grid_ref="src_grid_regular_clean" /> |
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| 48 | <field id="ch4_ice_clean" grid_ref="src_grid_regular_clean" /> |
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| 49 | <field id="ch4_gas_clean" grid_ref="src_grid_regular_clean" /> |
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| 50 | <field id="prec_haze_clean" grid_ref="src_grid_regular_clean" /> |
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| 51 | <field id="haze_clean" grid_ref="src_grid_regular_clean" /> |
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| 52 | <!-- soil --> |
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| 53 | <field id="inertiedat_clean" grid_ref="src_grid_soil_clean" /> |
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| 54 | <!-- q2 --> |
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| 55 | <field id="q2_clean" grid_ref="src_grid_regular_p1_clean" /> |
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| 56 | <!-- from topography file --> |
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| 57 | <field id="tsoil_clean" grid_ref="src_grid_soil_clean" /> |
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| 58 | </field_group> |
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| 59 | |
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| 60 | </field_definition> |
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| 61 | |
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| 62 | <file_definition type="one_file" par_access="collective" |
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| 63 | output_freq="1ts" output_level="10" enabled=".TRUE."> |
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| 64 | <!-- input files --> |
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| 65 | <file_group id="read_files" > |
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| 66 | <file id="start_archive_nc4" name="start_archive_nc4" mode="read" > |
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| 67 | <!-- 2D fields --> |
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| 68 | <field_group freq_offset="1ts" |
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| 69 | domain_ref="src_domain_regular" |
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| 70 | operation="instant" > |
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| 71 | <field id="src_ps" name="ps" /> |
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| 72 | <field id="src_q2surf" name="q2surf" /> |
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| 73 | <field id="src_tsurf" name="tsurf" /> |
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| 74 | <field id="src_emis" name="emis" /> |
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| 75 | <field id="src_ZMEA" name="ZMEA" /> |
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| 76 | <field id="src_ZSTD" name="ZSTD" /> |
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| 77 | <field id="src_ZSIG" name="ZSIG" /> |
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| 78 | <field id="src_ZGAM" name="ZGAM" /> |
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| 79 | <field id="src_ZTHE" name="ZTHE" /> |
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| 80 | <field id="src_albedodat" name="albedodat" /> |
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| 81 | |
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| 82 | <!--2D fields associated with tracers--> |
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| 83 | <field id="src_n2_surf" name="n2_surf" /> |
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| 84 | <field id="src_co_ice_surf" name="co_ice_surf" /> |
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| 85 | <field id="src_co_gas_surf" name="co_gas_surf" /> |
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| 86 | <field id="src_ch4_ice_surf" name="ch4_ice_surf" /> |
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| 87 | <field id="src_ch4_gas_surf" name="ch4_gas_surf" /> |
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| 88 | <field id="src_prec_haze_surf" name="prec_haze_surf" /> |
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| 89 | <field id="src_haze_surf" name="haze_surf" /> |
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| 90 | </field_group> |
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| 91 | <!-- 3D fields --> |
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| 92 | <field_group freq_offset="1ts" |
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| 93 | grid_ref="src_grid_regular" |
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| 94 | operation="instant" > |
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| 95 | <field id="src_temp" name="temp" /> |
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| 96 | <field id="src_u" name="u" /> |
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| 97 | <field id="src_v" name="v" /> |
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| 98 | <field id="src_q2atm" name="q2atm" /> |
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| 99 | <!-- traceurs --> |
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| 100 | <field id="src_trac1" name="n2" /> |
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| 101 | <field id="src_trac2" name="co_ice" /> |
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| 102 | <field id="src_trac3" name="co_gas" /> |
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| 103 | <field id="src_trac4" name="ch4_ice" /> |
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| 104 | <field id="src_trac5" name="ch4_gas" /> |
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| 105 | <field id="src_trac6" name="prec_haze" /> |
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| 106 | <field id="src_trac7" name="haze" /> |
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| 107 | </field_group> |
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| 108 | <!-- soil fields --> |
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| 109 | <field id="src_tsoil" name="tsoil" freq_offset="1ts" |
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| 110 | grid_ref="src_grid_soil" |
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| 111 | operation="instant" /> |
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| 112 | <field id="src_inertiedat" name="inertiedat" freq_offset="1ts" |
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| 113 | grid_ref="src_grid_soil" |
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| 114 | operation="instant" /> |
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| 115 | </file> |
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| 116 | <file id="surface_nc4" name="surface_nc4" mode="read" > |
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| 117 | <field id="zMOL" name="zMOL" |
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| 118 | domain_ref="src_topo_domain_regular" |
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| 119 | freq_offset="1ts" |
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| 120 | operation="instant" /> |
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| 121 | </file> |
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| 122 | </file_group> |
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| 123 | |
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| 124 | <!-- output files --> |
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| 125 | <file_group id="write_files" > |
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| 126 | <file id="start_icosa_prefinalize" name="start_icosa_prefinalize" > |
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| 127 | <!-- 2D fields --> |
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| 128 | <field_group domain_ref="dst_domain_unstructured" |
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| 129 | operation="once" > |
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| 130 | <field field_ref="ps_clean" name="ps" /> |
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| 131 | <!-- <field field_ref="phis_clean" name="phis" /> --> |
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| 132 | <field field_ref="topo" name="phis" /> |
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| 133 | </field_group> |
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| 134 | <!-- 3D fields --> |
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| 135 | <field_group grid_ref="dst_grid_unstructured" |
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| 136 | operation="once" > |
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| 137 | <field field_ref="theta_rhodz_clean" name="theta_rhodz" /> |
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| 138 | <field field_ref="u_clean" name="ulon" /> |
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| 139 | <field field_ref="v_clean" name="ulat" /> |
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| 140 | <!-- tracers --> |
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| 141 | <field field_ref="n2_clean" name="n2" /> |
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| 142 | <field field_ref="co_ice_clean" name="co_ice" /> |
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| 143 | <field field_ref="co_gas_clean" name="co_gas" /> |
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| 144 | <field field_ref="ch4_ice_clean" name="ch4_ice" /> |
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| 145 | <field field_ref="ch4_gas_clean" name="ch4_gas" /> |
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| 146 | <field field_ref="prec_haze_clean" name="prec_haze" /> |
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| 147 | <field field_ref="haze_clean" name="haze" /> |
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| 148 | </field_group> |
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| 149 | </file> |
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| 150 | <file id="startfi_prefinalize" name="startfi_prefinalize" > |
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| 151 | <!-- 2D --> |
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| 152 | <field_group domain_ref="dst_domain_unstructured" |
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| 153 | operation="once" > |
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| 154 | <field field_ref="topo" name="phisfi" /> |
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| 155 | <field field_ref="tsurf_clean" name="tsurf" /> |
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| 156 | <field field_ref="emis_clean" name="emis" /> |
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| 157 | <field field_ref="ZMEA_clean" name="ZMEA" /> |
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| 158 | <field field_ref="ZSTD_clean" name="ZSTD" /> |
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| 159 | <field field_ref="ZSIG_clean" name="ZSIG" /> |
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| 160 | <field field_ref="ZTHE_clean" name="ZTHE" /> |
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| 161 | <field field_ref="ZGAM_clean" name="ZGAM" /> |
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| 162 | <field field_ref="albedodat_clean" name="albedodat" /> |
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| 163 | |
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| 164 | <!-- 2D fields associated to tracers --> |
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| 165 | <field field_ref="n2_surf_clean" name="n2" /> |
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| 166 | <field field_ref="co_ice_surf_clean" name="co_ice" /> |
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| 167 | <field field_ref="co_gas_surf_clean" name="co_gas" /> |
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| 168 | <field field_ref="ch4_ice_surf_clean" name="ch4_ice" /> |
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| 169 | <field field_ref="ch4_gas_surf_clean" name="ch4_gas" /> |
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| 170 | <field field_ref="prec_haze_surf_clean" name="prec_haze" /> |
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| 171 | <field field_ref="haze_surf_clean" name="haze" /> |
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| 172 | </field_group> |
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| 173 | <!-- soil fields --> |
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| 174 | <field field_ref="tsoil_clean" name="tsoil" |
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| 175 | grid_ref="dst_grid_soil_unstructured" |
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| 176 | operation="once" /> |
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| 177 | <field field_ref="inertiedat_clean" name="inertiedat" |
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| 178 | grid_ref="dst_grid_soil_unstructured" |
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| 179 | operation="once" /> |
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| 180 | <!-- q2 field --> |
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| 181 | <field field_ref="q2_clean" name="q2" |
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| 182 | grid_ref="dst_p1_grid_unstructured" |
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| 183 | operation="once" /> |
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| 184 | <!-- 3D fields --> |
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| 185 | </file> |
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| 186 | </file_group> |
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| 187 | </file_definition> |
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| 188 | |
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| 189 | <axis_definition> |
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| 190 | <axis id="lev" positive="down" |
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| 191 | standard_name="atmosphere_hybrid_sigma_pressure_coordinate" |
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| 192 | long_name="hybrid level at midpoints" /> |
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| 193 | <axis id="lev_p1" positive="down" /> |
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| 194 | <axis id="nq" name="nq" /> |
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| 195 | <axis id="soil_layers" name="subsurface_layers" /> |
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| 196 | </axis_definition> |
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| 197 | |
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| 198 | <domain_definition> |
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| 199 | <domain_group id="read_domains"> |
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| 200 | <domain id="src_domain_regular" type="rectilinear"> |
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| 201 | <!-- <generate_rectilinear_domain /> --> |
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| 202 | </domain> |
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| 203 | <domain id="src_domain_regular_clean" type="rectilinear"> |
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| 204 | <!-- <generate_rectilinear_domain /> --> |
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| 205 | </domain> |
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| 206 | <domain id="src_topo_domain_regular" type="rectilinear"> |
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| 207 | <!-- <generate_rectilinear_domain /> --> |
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| 208 | </domain> |
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| 209 | </domain_group> |
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| 210 | |
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| 211 | <domain_group id="domain_dst"> |
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| 212 | <domain id="dst_domain_unstructured" type="unstructured"> |
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| 213 | <interpolate_domain order="1" renormalize="true" /> |
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| 214 | </domain> |
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| 215 | </domain_group> |
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| 216 | </domain_definition> |
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| 217 | |
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| 218 | <grid_definition> |
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| 219 | <grid_group id="read_grids"> |
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| 220 | <grid id="src_grid_regular"> |
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| 221 | <domain domain_ref="src_domain_regular" /> |
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| 222 | <axis axis_ref="lev" /> |
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| 223 | </grid> |
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| 224 | <grid id="src_grid_regular_clean"> |
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| 225 | <domain domain_ref="src_domain_regular_clean" /> |
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| 226 | <axis axis_ref="lev" /> |
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| 227 | </grid> |
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| 228 | <grid id="src_grid_regular_p1_clean"> |
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| 229 | <domain domain_ref="src_domain_regular_clean" /> |
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| 230 | <axis axis_ref="lev_p1" /> |
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| 231 | </grid> |
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| 232 | <grid id="src_nq_grid_regular_clean"> |
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| 233 | <domain domain_ref="src_domain_regular_clean" /> |
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| 234 | <axis axis_ref="lev" /> |
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| 235 | <axis axis_ref="nq" /> |
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| 236 | </grid> |
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| 237 | <grid id="src_grid_soil"> |
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| 238 | <domain domain_ref="src_domain_regular" /> |
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| 239 | <axis axis_ref="soil_layers" /> |
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| 240 | </grid> |
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| 241 | <grid id="src_grid_soil_clean"> |
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| 242 | <domain domain_ref="src_domain_regular_clean" /> |
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| 243 | <axis axis_ref="soil_layers" /> |
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| 244 | </grid> |
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| 245 | </grid_group> |
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| 246 | |
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| 247 | <grid_group id="grid_dst"> |
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| 248 | <grid id="dst_grid_unstructured"> |
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| 249 | <domain domain_ref="dst_domain_unstructured" /> |
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| 250 | <axis axis_ref="lev" /> |
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| 251 | </grid> |
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| 252 | <grid id="dst_p1_grid_unstructured"> |
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| 253 | <domain domain_ref="dst_domain_unstructured" /> |
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| 254 | <axis axis_ref="lev_p1" /> |
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| 255 | </grid> |
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| 256 | <grid id="dst_nq_grid_unstructured"> |
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| 257 | <domain domain_ref="dst_domain_unstructured" /> |
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| 258 | <axis axis_ref="lev" /> |
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| 259 | <axis axis_ref="nq" /> |
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| 260 | </grid> |
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| 261 | <grid id="dst_grid_soil_unstructured"> |
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| 262 | <domain domain_ref="dst_domain_unstructured" /> |
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| 263 | <axis axis_ref="soil_layers" /> |
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| 264 | </grid> |
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| 265 | </grid_group> |
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| 266 | |
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| 267 | </grid_definition> |
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| 268 | |
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| 269 | </context> |
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| 270 | |
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| 271 | <context id="xios"> |
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| 272 | <variable_definition> |
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| 273 | <variable_group id="buffer"> |
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| 274 | <variable id="optimal_buffer_size" type="string">performance</variable> |
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| 275 | <variable id="buffer_size_factor" type="double">30.0</variable> |
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| 276 | <variable id="min_buffer_size" type="double">800000</variable> |
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| 277 | </variable_group> |
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| 278 | |
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| 279 | <variable_group id="parameters" > |
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| 280 | <variable id="using_server" type="bool">false</variable> |
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| 281 | <variable id="info_level" type="int">100</variable> |
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| 282 | <variable id="print_file" type="bool">false</variable> |
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| 283 | </variable_group> |
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| 284 | </variable_definition> |
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| 285 | </context> |
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| 286 | </simulation> |
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| 287 | |
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