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physiq_mod.F90 @ 3244

Last change on this file since 3244 was 3244, checked in by afalco, 9 months ago
Pluto PCM: Give priority to vdifc from pluto.old & fixed it. AF
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1	module physiq_mod
2
3	implicit none
4
5	contains
6
7	subroutine physiq(ngrid,nlayer,nq, &
8	firstcall,lastcall, &
9	pday,ptime,ptimestep, &
10	pplev,pplay,pphi, &
11	pu,pv,pt,pq, &
12	flxw, &
13	pdu,pdv,pdt,pdq,pdpsrf)
14
15	!!
16	use write_field_phy, only: Writefield_phy
17	!!
18	use ioipsl_getin_p_mod, only: getin_p
19	use radinc_h, only : L_NSPECTI,L_NSPECTV,naerkind, corrkdir, banddir
20	use generic_cloud_common_h, only : epsi_generic, Psat_generic
21	use gases_h, only: gnom, gfrac
22	use radcommon_h, only: sigma, glat, grav, BWNV, WNOI, DWNI, DWNV, WNOV
23	use suaer_corrk_mod, only: suaer_corrk
24	use radii_mod, only: su_aer_radii,haze_reffrad_fix
25	use aerosol_mod, only: iaero_haze, i_haze, haze_prof
26	use surfdat_h, only: phisfi, zmea, zstd, zsig, zgam, zthe, &
27	dryness
28	use comdiurn_h, only: coslat, sinlat, coslon, sinlon
29	use comsaison_h, only: mu0, fract, dist_star, declin, right_ascen
30	use comsoil_h, only: nsoilmx, layer, mlayer, inertiedat
31	use geometry_mod, only: latitude, longitude, cell_area
32	USE comgeomfi_h, only: totarea, totarea_planet
33	USE tracer_h, only: noms, mmol, radius, rho_q, qext, &
34	igcm_n2,igcm_ch4_gas,igcm_ch4_ice,igcm_haze,&
35	igcm_co_gas,igcm_co_ice,igcm_prec_haze,lw_n2,&
36	alpha_lift, alpha_devil, qextrhor, &
37	nesp, is_chim, is_condensable,constants_epsi_generic
38	use time_phylmdz_mod, only: ecritphy, iphysiq, nday
39	use phyetat0_mod, only: phyetat0
40	use wstats_mod, only: callstats, wstats, mkstats
41	use phyredem, only: physdem0, physdem1
42	use planetwide_mod, only: planetwide_minval,planetwide_maxval,planetwide_sumval
43	use mod_phys_lmdz_para, only : is_master
44	use planete_mod, only: apoastr, periastr, year_day, peri_day, &
45	obliquit, nres, z0, adjust, tpal
46	use comcstfi_mod, only: pi, g, rcp, r, rad, mugaz, cpp
47	use time_phylmdz_mod, only: daysec
48	use callkeys_mod, only: albedo_spectral_mode, calladj, calldifv, &
49	callrad, callsoil, nosurf, &
50	aerohaze, corrk, diagdtau,&
51	diurnal, enertest, fat1au, &
52	icetstep, intheat, iradia, kastprof, &
53	lwrite, mass_redistrib, meanOLR, &
54	fast,fasthaze,haze,metcloud,monoxcloud,&
55	n2cond,nearn2cond,noseason_day,conservn2, &
56	kbo,triton,paleo,paleoyears, &
57	carbox, methane, UseVdifcPlutold, &
58	aerohaze,haze_proffix,source_haze, &
59	season, sedimentation,generic_condensation, &
60	specOLR, &
61	startphy_file, testradtimes, &
62	tracer, UseTurbDiff, &
63	global1d, szangle
64	use generic_tracer_index_mod, only: generic_tracer_index
65	use check_fields_mod, only: check_physics_fields
66	use conc_mod, only: rnew, cpnew, ini_conc_mod
67	use phys_state_var_mod
68	use callcorrk_mod, only: callcorrk
69	use vdifc_mod, only: vdifc
70	use vdifc_pluto_mod, only: vdifc_pluto
71	use turbdiff_mod, only: turbdiff
72	use turb_mod, only : q2,sensibFlux,turb_resolved
73	use mass_redistribution_mod, only: mass_redistribution
74	use condensation_generic_mod, only: condensation_generic
75	use datafile_mod, only: datadir
76	#ifndef MESOSCALE
77	use vertical_layers_mod, only: presnivs, pseudoalt
78	use mod_phys_lmdz_omp_data, ONLY: is_omp_master
79	#else
80	use comm_wrf, only : comm_HR_SW, comm_HR_LW, &
81	comm_CLOUDFRAC,comm_TOTCLOUDFRAC, comm_RH, &
82	comm_HR_DYN, &
83	comm_DQICE,comm_DQVAP,comm_ALBEQ, &
84	comm_FLUXTOP_DN,comm_FLUXABS_SW, &
85	comm_FLUXTOP_LW,comm_FLUXSURF_SW, &
86	comm_FLUXSURF_LW,comm_FLXGRD, &
87	comm_DTRAIN,comm_DTLSC, &
88	comm_LATENT_HF
89
90	#endif
91
92	#ifdef CPP_XIOS
93	use xios_output_mod, only: initialize_xios_output, &
94	update_xios_timestep, &
95	send_xios_field
96	use wxios, only: wxios_context_init, xios_context_finalize
97	#endif
98
99	implicit none
100
101
102	!==================================================================
103	!
104	! Purpose
105	! -------
106	! Central subroutine for all the physics parameterisations in the
107	! universal model. Originally adapted from the Mars LMDZ model.
108	!
109	! The model can be run without or with tracer transport
110	! depending on the value of "tracer" in file "callphys.def".
111	!
112	!
113	! It includes:
114	!
115	! I. Initialization :
116	! I.1 Firstcall initializations.
117	! I.2 Initialization for every call to physiq.
118	!
119	! II. Compute radiative transfer tendencies (longwave and shortwave) :
120	! II.a Option 1 : Call correlated-k radiative transfer scheme.
121	! II.b Option 2 : Call Newtonian cooling scheme.
122	! II.! Option 3 : Atmosphere has no radiative effect.
123	!
124	! III. Vertical diffusion (turbulent mixing) :
125	!
126	! IV. Convection :
127	! IV.a Thermal plume model
128	! IV.b Dry convective adjusment
129	!
130	! V. Condensation and sublimation of gases (currently just N2).
131	!
132	! VI. Tracers
133	! VI.1. Water and water ice.
134	! VI.2 Photochemistry
135	! VI.3. Aerosols and particles.
136	! VI.4. Updates (pressure variations, surface budget).
137	! VI.5. Slab Ocean.
138	! VI.6. Surface Tracer Update.
139	!
140	! VII. Surface and sub-surface soil temperature.
141	!
142	! VIII. Perform diagnostics and write output files.
143	!
144	!
145	! arguments
146	! ---------
147	!
148	! INPUT
149	! -----
150	!
151	! ngrid Size of the horizontal grid.
152	! nlayer Number of vertical layers.
153	! nq Number of advected fields.
154	!
155	! firstcall True at the first call.
156	! lastcall True at the last call.
157	!
158	! pday Number of days counted from the North. Spring equinoxe.
159	! ptime Universal time (0<ptime<1): ptime=0.5 at 12:00 UT.
160	! ptimestep timestep (s).
161	!
162	! pplay(ngrid,nlayer) Pressure at the middle of the layers (Pa).
163	! pplev(ngrid,nlayer+1) Intermediate pressure levels (Pa).
164	! pphi(ngrid,nlayer) Geopotential at the middle of the layers (m2.s-2).
165	!
166	! pu(ngrid,nlayer) u, zonal component of the wind (ms-1).
167	! pv(ngrid,nlayer) v, meridional component of the wind (ms-1).
168	!
169	! pt(ngrid,nlayer) Temperature (K).
170	!
171	! pq(ngrid,nlayer,nq) Advected fields.
172	!
173	! pudyn(ngrid,nlayer) \
174	! pvdyn(ngrid,nlayer) \ Dynamical temporal derivative for the
175	! ptdyn(ngrid,nlayer) / corresponding variables.
176	! pqdyn(ngrid,nlayer,nq) /
177	! flxw(ngrid,nlayer) vertical mass flux (kg/s) at layer lower boundary
178	!
179	! OUTPUT
180	! ------
181	!
182	! pdu(ngrid,nlayer) \
183	! pdv(ngrid,nlayer) \ Temporal derivative of the corresponding
184	! pdt(ngrid,nlayer) / variables due to physical processes.
185	! pdq(ngrid,nlayer) /
186	! pdpsrf(ngrid) /
187	!
188	!
189	! Authors
190	! -------
191	! Frederic Hourdin 15/10/93
192	! Francois Forget 1994
193	! Christophe Hourdin 02/1997
194	! Subroutine completely rewritten by F. Forget (01/2000)
195	! Water ice clouds: Franck Montmessin (update 06/2003)
196	! Radiatively active tracers: J.-B. Madeleine (10/2008-06/2009)
197	! New correlated-k radiative scheme: R. Wordsworth (2009)
198	! Many specifically Martian subroutines removed: R. Wordsworth (2009)
199	! Improved water cycle: R. Wordsworth / B. Charnay (2010)
200	! To F90: R. Wordsworth (2010)
201	! New turbulent diffusion scheme: J. Leconte (2012)
202	! Loops converted to F90 matrix format: J. Leconte (2012)
203	! No more ngrid/nq, F90 commons and adaptation to parallel: A. Spiga (2012)
204	! Purge of the code : M. Turbet (2015)
205	! Photochemical core developped by F. Lefevre: B. Charnay (2017)
206	! Purge for Pluto model : A. Falco (2024)
207	!==================================================================
208
209
210	! 0. Declarations :
211	! ------------------
212
213	include "netcdf.inc"
214
215	! Arguments :
216	! -----------
217
218	! INPUTS:
219	! -------
220
221	integer,intent(in) :: ngrid ! Number of atmospheric columns.
222	integer,intent(in) :: nlayer ! Number of atmospheric layers.
223	integer,intent(in) :: nq ! Number of tracers.
224
225	logical,intent(in) :: firstcall ! Signals first call to physics.
226	logical,intent(in) :: lastcall ! Signals last call to physics.
227
228	real,intent(in) :: pday ! Number of elapsed sols since reference Ls=0.
229	real,intent(in) :: ptime ! "Universal time", given as fraction of sol (e.g.: 0.5 for noon).
230	real,intent(in) :: ptimestep ! Physics timestep (s).
231	real,intent(in) :: pplev(ngrid,nlayer+1) ! Inter-layer pressure (Pa).
232	real,intent(in) :: pplay(ngrid,nlayer) ! Mid-layer pressure (Pa).
233	real,intent(in) :: pphi(ngrid,nlayer) ! Geopotential at mid-layer (m2s-2).
234	real,intent(in) :: pu(ngrid,nlayer) ! Zonal wind component (m/s).
235	real,intent(in) :: pv(ngrid,nlayer) ! Meridional wind component (m/s).
236	real,intent(in) :: pt(ngrid,nlayer) ! Temperature (K).
237	real,intent(in) :: pq(ngrid,nlayer,nq) ! Tracers (kg/kg_of_air).
238	real,intent(in) :: flxw(ngrid,nlayer) ! Vertical mass flux (ks/s) at lower boundary of layer
239
240	! OUTPUTS:
241	! --------
242
243	! Physical tendencies :
244
245	real,intent(out) :: pdu(ngrid,nlayer) ! Zonal wind tendencies (m/s/s).
246	real,intent(out) :: pdv(ngrid,nlayer) ! Meridional wind tendencies (m/s/s).
247	real,intent(out) :: pdt(ngrid,nlayer) ! Temperature tendencies (K/s).
248	real,intent(out) :: pdq(ngrid,nlayer,nq) ! Tracer tendencies (kg/kg_of_air/s).
249	real,intent(out) :: pdpsrf(ngrid) ! Surface pressure tendency (Pa/s).
250
251	! Local saved variables:
252	! ----------------------
253	integer,save :: day_ini ! Initial date of the run (sol since Ls=0).
254	integer,save :: icount ! Counter of calls to physiq during the run.
255	!$OMP THREADPRIVATE(day_ini,icount)
256
257	!Pluto specific
258	REAL,save :: acond,bcond
259	REAL,save :: tcond1p4Pa
260	DATA tcond1p4Pa/38/
261
262
263
264	! Local variables :
265	! -----------------
266	! Tendencies for the paleoclimate mode
267	REAL qsurfyear(ngrid,nq) ! kg.m-2 averaged mass of ice lost/gained in the last Pluto year of the run
268	REAL phisfinew(ngrid) ! geopotential of the bedrock (= phisfi-qsurf/1000*g)
269	REAL qsurfpal(ngrid,nq) ! qsurf after a paleoclimate step : for physdem1 and restartfi
270	REAL phisfipal(ngrid) ! geopotential after a paleoclimate step : for physdem1 and restartfi
271	REAL oblipal ! change of obliquity
272	REAL peri_daypal ! new periday
273	REAL eccpal ! change of eccentricity
274	REAL tpalnew ! change of time
275	REAL adjustnew ! change in N2 ice albedo
276	REAL pdaypal ! new pday = day_ini + step
277	REAL zdt_tot ! time range corresponding to the flux of qsurfyear
278	REAL massacc(nq) ! accumulated mass
279	REAL masslost(nq) ! accumulated mass
280
281	REAL globave ! globalaverage 2D ps
282	REAL globaveice(nq) ! globalaverage 2D ice
283	REAL globavenewice(nq) ! globalaverage 2D ice
284	INTEGER lecttsoil ! lecture of tsoil from proftsoil
285	REAL qsurf1(ngrid,nq) ! saving qsurf to calculate flux over long timescales kg.m-2
286	REAL flusurf(ngrid,nq) ! flux cond/sub kg.m-2.s-1
287	REAL flusurfold(ngrid,nq) ! old flux cond/sub kg.m-2.s-1
288	REAL zplev(ngrid,nlayer+1),zplay(ngrid,nlayer)
289
290
291
292	! Aerosol (dust or ice) extinction optical depth at reference wavelength
293	! for the "naerkind" optically active aerosols:
294
295	real,save,allocatable :: aerosol(:,:,:) ! Aerosols
296	!$OMP THREADPRIVATE(aerosol)
297	real zh(ngrid,nlayer) ! Potential temperature (K).
298	real pw(ngrid,nlayer) ! Vertical velocity (m/s). (NOTE : >0 WHEN DOWNWARDS !!)
299	real omega(ngrid,nlayer) ! omega velocity (Pa/s, >0 when downward)
300
301	integer i,l,ig,ierr,iq,nw,isoil,iesp, igcm_generic_vap, igcm_generic_ice
302	logical call_ice_vap_generic ! to call only one time the ice/vap pair of a tracer
303
304	real zls ! Solar longitude (radians).
305	real zlss ! Sub solar point longitude (radians).
306	real zday ! Date (time since Ls=0, calculated in sols).
307	real zzlay(ngrid,nlayer) ! Altitude at the middle of the atmospheric layers.
308	real zzlev(ngrid,nlayer+1) ! Altitude at the atmospheric layer boundaries.
309
310
311	! VARIABLES for the thermal plume model (AF24: deleted)
312
313	! TENDENCIES due to various processes :
314
315	! For Surface Temperature : (K/s)
316	real zdtsurf(ngrid) ! Cumulated tendencies.
317	real zdtsurfmr(ngrid) ! Mass_redistribution routine.
318	real zdtsurfc(ngrid) ! Condense_n2 routine.
319	real zdtsdif(ngrid) ! Turbdiff/vdifc routines.
320	! real zdtsurf_hyd(ngrid) ! Hydrol routine.
321
322	! For Atmospheric Temperatures : (K/s)
323	real dtlscale(ngrid,nlayer) ! Largescale routine.
324	real dt_generic_condensation(ngrid,nlayer) ! condensation_generic routine.
325	real zdtc(ngrid,nlayer) ! Condense_n2 routine.
326	real zdtdif(ngrid,nlayer) ! Turbdiff/vdifc routines.
327	real zdtmr(ngrid,nlayer) ! Mass_redistribution routine.
328	real zdtsw1(ngrid,nlayer), zdtlw1(ngrid,nlayer) ! Callcorrk routine.
329	real zdtchim(ngrid,nlayer) ! Calchim routine.
330
331	! For Surface Tracers : (kg/m2/s)
332	real dqsurf(ngrid,nq) ! Cumulated tendencies.
333	!real zdqsurfc(ngrid) ! Condense_n2 routine.
334	REAL zdqsc(ngrid,nq) ! Condense_n2 routine.
335	real zdqsdif(ngrid,nq) ! Turbdiff/vdifc routines.
336	real zdqssed(ngrid,nq) ! Callsedim routine.
337	real zdqsurfmr(ngrid,nq) ! Mass_redistribution routine.
338
339	! For Tracers : (kg/kg_of_air/s)
340	real zdqc(ngrid,nlayer,nq) ! Condense_n2 routine.
341	real zdqadj(ngrid,nlayer,nq) ! Convadj routine.
342	real zdqdif(ngrid,nlayer,nq) ! Turbdiff/vdifc routines.
343	real zdqevap(ngrid,nlayer) ! Turbdiff routine.
344	real zdqsed(ngrid,nlayer,nq) ! Callsedim routine.
345	real zdqmr(ngrid,nlayer,nq) ! Mass_redistribution routine.
346	real dqvaplscale_generic(ngrid,nlayer,nq) ! condensation_generic routine.
347	real dqcldlscale_generic(ngrid,nlayer,nq) ! condensation_generic routine.
348	REAL,allocatable,save :: zdqchim(:,:,:) ! Calchim_asis routine
349	REAL,allocatable,save :: zdqschim(:,:) ! Calchim_asis routine
350	!$OMP THREADPRIVATE(zdqchim,zdqschim)
351
352
353	!! PLUTO variables
354	REAL zdqch4cloud(ngrid,nlayer,nq)
355	REAL zdqsch4cloud(ngrid,nq)
356	REAL zdtch4cloud(ngrid,nlayer)
357	REAL zdqcocloud(ngrid,nlayer,nq)
358	REAL zdqscocloud(ngrid,nq)
359	REAL zdtcocloud(ngrid,nlayer)
360	REAL rice_ch4(ngrid,nlayer) ! Methane ice geometric mean radius (m)
361	REAL rice_co(ngrid,nlayer) ! CO ice geometric mean radius (m)
362
363	REAL zdqsch4fast(ngrid) ! used only for fast model nogcm
364	REAL zdqch4fast(ngrid) ! used only for fast model nogcm
365	REAL zdqscofast(ngrid) ! used only for fast model nogcm
366	REAL zdqcofast(ngrid) ! used only for fast model nogcm
367	REAL zdqflow(ngrid,nq)
368
369	REAL zdteuv(ngrid,nlayer) ! (K/s)
370	REAL zdtconduc(ngrid,nlayer) ! (K/s)
371	REAL zdumolvis(ngrid,nlayer)
372	REAL zdvmolvis(ngrid,nlayer)
373	real zdqmoldiff(ngrid,nlayer,nq)
374
375	! Haze relatated tendancies
376	REAL zdqhaze(ngrid,nlayer,nq)
377	REAL zdqprodhaze(ngrid,nq)
378	REAL zdqsprodhaze(ngrid)
379	REAL zdqhaze_col(ngrid)
380	REAL zdqphot_prec(ngrid,nlayer)
381	REAL zdqphot_ch4(ngrid,nlayer)
382	REAL zdqconv_prec(ngrid,nlayer)
383	REAL zdq_source(ngrid,nlayer,nq)
384	! Fast Haze relatated tendancies
385	REAL fluxbot(ngrid)
386	REAL gradflux(ngrid)
387	REAL fluxlym_sol_bot(ngrid) ! Solar flux Lyman alpha ph.m-2.s-1 reaching the surface
388	REAL fluxlym_ipm_bot(ngrid) ! IPM (Interplanetary) flux Lyman alpha ph.m-2.s-1 reaching the surface
389	REAL flym_sol(ngrid) ! Incident Solar flux Lyman alpha ph.m-2.s-1
390	REAL flym_ipm(ngrid) ! Incident IPM (Interplanetary) flux Lyman alpha ph.m-2.s-1
391	REAL zfluxuv ! Lyman alpha flux at 1AU
392
393
394
395	REAL array_zero1(ngrid)
396	REAL array_zero2(ngrid,nlayer)
397
398	! For Winds : (m/s/s)
399	real zdvadj(ngrid,nlayer), zduadj(ngrid,nlayer) ! Convadj routine.
400	real zdumr(ngrid,nlayer), zdvmr(ngrid,nlayer) ! Mass_redistribution routine.
401	real zdvdif(ngrid,nlayer), zdudif(ngrid,nlayer) ! Turbdiff/vdifc routines.
402	real zdhdif(ngrid,nlayer) ! Turbdiff/vdifc routines.
403	real zdhadj(ngrid,nlayer) ! Convadj routine.
404	REAL zdvc(ngrid,nlayer),zduc(ngrid,nlayer) ! condense_n2 routine.
405
406	! For Pressure and Mass :
407	real zdmassmr(ngrid,nlayer) ! Atmospheric Mass tendency for mass_redistribution (kg_of_air/m2/s).
408	real zdmassmr_col(ngrid) ! Atmospheric Column Mass tendency for mass_redistribution (kg_of_air/m2/s).
409	real zdpsrfmr(ngrid) ! Pressure tendency for mass_redistribution routine (Pa/s).
410
411
412
413	! Local variables for LOCAL CALCULATIONS:
414	! ---------------------------------------
415	real zflubid(ngrid)
416	real zplanck(ngrid),zpopsk(ngrid,nlayer)
417	REAL zdum1(ngrid,nlayer)
418	REAL zdum2(ngrid,nlayer)
419	real ztim1,ztim2,ztim3, z1,z2
420	real ztime_fin
421	real zdh(ngrid,nlayer)
422	real gmplanet
423	real taux(ngrid),tauy(ngrid)
424
425
426	! local variables for DIAGNOSTICS : (diagfi & stat)
427	! -------------------------------------------------
428	real ps(ngrid) ! Surface Pressure.
429	real zt(ngrid,nlayer) ! Atmospheric Temperature.
430	real zu(ngrid,nlayer),zv(ngrid,nlayer) ! Zonal and Meridional Winds.
431	real zq(ngrid,nlayer,nq) ! Atmospheric Tracers.
432	real zdtadj(ngrid,nlayer) ! Convadj Diagnostic.
433	real zdtdyn(ngrid,nlayer) ! Dynamical Heating (K/s).
434	real zdudyn(ngrid,nlayer) ! Dynamical Zonal Wind tendency (m.s-2).
435
436	real reff(ngrid,nlayer) ! Effective dust radius (used if doubleq=T).
437	real vmr(ngrid,nlayer) ! volume mixing ratio
438	real time_phys
439
440	real ISR,ASR,OLR,GND,DYN,GSR,Ts1,Ts2,Ts3,TsS ! for Diagnostic.
441
442	real qcol(ngrid,nq) ! Tracer Column Mass (kg/m2).
443
444	! Pluto adding variables
445	real vmr_ch4(ngrid) ! vmr ch4
446	real vmr_co(ngrid) ! vmr co
447	real rho(ngrid,nlayer) ! density
448	real zrho_ch4(ngrid,nlayer) ! density methane kg.m-3
449	real zrho_co(ngrid,nlayer) ! density CO kg.m-3
450	real zrho_haze(ngrid,nlayer) ! density haze kg.m-3
451	real zdqrho_photprec(ngrid,nlayer) !photolysis rate kg.m-3.s-1
452	real zq1temp_ch4(ngrid) !
453	real qsat_ch4(ngrid) !
454	real qsat_ch4_l1(ngrid) !
455	! CHARACTER(LEN=20) :: txt ! to temporarly store text for eddy tracers
456	real profmmr(ngrid,nlayer) ! fixed profile of haze if haze_proffix
457	real sensiblehf1(ngrid) ! sensible heat flux
458	real sensiblehf2(ngrid) ! sensible heat flux
459
460	! included by RW for H2O Manabe scheme
461	real rneb_man(ngrid,nlayer) ! H2O cloud fraction (moistadj).
462	real rneb_lsc(ngrid,nlayer) ! H2O cloud fraction (large scale).
463
464
465	! to test energy conservation (RW+JL)
466	real mass(ngrid,nlayer),massarea(ngrid,nlayer)
467	real dEtot, dEtots, AtmToSurf_TurbFlux
468	real,save :: dEtotSW, dEtotsSW, dEtotLW, dEtotsLW
469	!$OMP THREADPRIVATE(dEtotSW, dEtotsSW, dEtotLW, dEtotsLW)
470
471	!JL12 conservation test for mean flow kinetic energy has been disabled temporarily
472
473	real dtmoist_max,dtmoist_min
474	real dItot, dItot_tmp, dVtot, dVtot_tmp
475
476
477	real dWtot, dWtot_tmp, dWtots, dWtots_tmp
478
479	real psat_tmp ! AF24: to remove?
480
481	real qsat_generic(ngrid,nlayer,nq) ! generic condensable tracers (GCS) specific concentration at saturation (kg/kg_of_air).
482	real RH_generic(ngrid,nlayer,nq) ! generic condensable tracers (GCS) Relative humidity.
483	real rneb_generic(ngrid,nlayer,nq) ! GCS cloud fraction (generic condensation).
484	real psat_tmp_generic
485	real, save :: metallicity ! metallicity of planet --- is not used here, but necessary to call function Psat_generic
486	!$OMP THREADPRIVATE(metallicity)
487
488	real reffrad_generic_zeros_for_wrf(ngrid,nlayer) ! !!! this is temporary, it is only a list of zeros, it will be replaced when a generic aerosol will be implemented
489
490	! For Clear Sky Case. (AF24: deleted)
491
492	real nconsMAX, vdifcncons(ngrid), cadjncons(ngrid) ! Vdfic water conservation test. By RW
493
494	real muvar(ngrid,nlayer+1) ! For Runaway Greenhouse 1D study. By RW
495
496	real,save,allocatable :: reffcol(:,:)
497	!$OMP THREADPRIVATE(reffcol)
498
499	! Non-oro GW tendencies
500	REAL d_u_hin(ngrid,nlayer), d_v_hin(ngrid,nlayer)
501	REAL d_t_hin(ngrid,nlayer)
502	! Diagnostics 2D of gw_nonoro
503	REAL zustrhi(ngrid), zvstrhi(ngrid)
504
505
506	real :: tsurf2(ngrid)
507	!! real :: flux_o(ngrid),flux_g(ngrid)
508	real :: flux_g(ngrid)
509	real :: flux_sens_lat(ngrid)
510	real :: qsurfint(ngrid,nq)
511	#ifdef MESOSCALE
512	REAL :: lsf_dt(nlayer)
513	REAL :: lsf_dq(nlayer)
514	#endif
515
516	! flags to trigger extra sanity checks
517	logical, save :: check_physics_inputs=.false.
518	logical, save :: check_physics_outputs=.false.
519	!$OPM THREADPRIVATE(check_physics_inputs,check_physics_outputs)
520
521	! Misc
522	character*2 :: str2
523	character(len=10) :: tmp1
524	character(len=10) :: tmp2
525	!==================================================================================================
526
527	! -----------------
528	! I. INITIALISATION
529	! -----------------
530
531	! --------------------------------
532	! I.1 First Call Initialisation.
533	! --------------------------------
534	if (firstcall) then
535	call getin_p("check_physics_inputs", check_physics_inputs)
536	call getin_p("check_physics_outputs", check_physics_outputs)
537
538	! Allocate saved arrays (except for 1D model, where this has already
539	! been done)
540	#ifndef MESOSCALE
541	if (ngrid>1) call phys_state_var_init(nq)
542	#endif
543
544	! Variables set to 0
545	! ~~~~~~~~~~~~~~~~~~
546	dtrad(:,:) = 0.0
547	fluxrad(:) = 0.0
548	tau_col(:) = 0.0
549	zdtsw(:,:) = 0.0
550	zdtlw(:,:) = 0.0
551
552	! Initialize tracer names, indexes and properties.
553	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
554	IF (.NOT.ALLOCATED(noms)) ALLOCATE(noms(nq)) ! (because noms is an argument of physdem1 whether or not tracer is on)
555	if (tracer) then
556	call initracer(ngrid,nq)
557	! if(photochem) then !AF24: removed
558	endif
559	! Initialize aerosol indexes.
560	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~
561	! call iniaerosol
562	! allocate related local arrays
563	! (need be allocated instead of automatic because of "naerkind")
564	allocate(aerosol(ngrid,nlayer,naerkind))
565	allocate(reffcol(ngrid,naerkind))
566
567	#ifdef CPP_XIOS
568	! Initialize XIOS context
569	write(,) "physiq: call wxios_context_init"
570	CALL wxios_context_init
571	#endif
572
573	! Read 'startfi.nc' file.
574	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
575	#ifndef MESOSCALE
576	call phyetat0(startphy_file, &
577	ngrid,nlayer,"startfi.nc",0,0,nsoilmx,nq, &
578	day_ini,time_phys,tsurf,tsoil,emis,q2,qsurf)
579
580	#else
581
582	day_ini = pday
583	#endif
584
585	#ifndef MESOSCALE
586	if (.not.startphy_file) then
587	! additionnal "academic" initialization of physics
588	if (is_master) write(,) "Physiq: initializing tsurf(:) to pt(:,1) !!"
589	tsurf(:)=pt(:,1)
590	if (is_master) write(,) "Physiq: initializing tsoil(:) to pt(:,1) !!"
591	do isoil=1,nsoilmx
592	tsoil(1:ngrid,isoil)=tsurf(1:ngrid)
593	enddo
594	if (is_master) write(,) "Physiq: initializing day_ini to pday !"
595	day_ini=pday
596	endif
597	#endif
598	if (pday.ne.day_ini) then
599	write(,) "ERROR in physiq.F90:"
600	write(,) "bad synchronization between physics and dynamics"
601	write(,) "dynamics day: ",pday
602	write(,) "physics day: ",day_ini
603	stop
604	endif
605
606	write (,) 'In physiq day_ini =', day_ini
607
608	! Initialize albedo calculation.
609	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
610	albedo(:,:)=0.0
611	albedo_bareground(:)=0.0
612	albedo_snow_SPECTV(:)=0.0
613	albedo_n2_ice_SPECTV(:)=0.0
614	call surfini(ngrid,nq,qsurf,albedo,albedo_bareground,albedo_snow_SPECTV,albedo_n2_ice_SPECTV)
615
616	! Initialize orbital calculation.
617	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
618	call iniorbit(apoastr,periastr,year_day,peri_day,obliquit)
619
620
621	! Initialize soil.
622	! ~~~~~~~~~~~~~~~~
623	if (callsoil) then
624	call soil(ngrid,nsoilmx,firstcall,lastcall,inertiedat, &
625	ptimestep,tsurf,tsoil,capcal,fluxgrd)
626	else ! else of 'callsoil'.
627	print*,'WARNING! Thermal conduction in the soil turned off'
628	capcal(:)=1.e6
629	fluxgrd(:)=intheat
630	print*,'Flux from ground = ',intheat,' W m^-2'
631	endif ! end of 'callsoil'.
632
633	icount=1
634
635	! Initialize surface history variable.
636	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
637	qsurf_hist(:,:)=qsurf(:,:)
638
639	!! call WriteField_phy("post_qsurf_hist_qsurf",qsurf(1:ngrid,igcm_h2o_vap),1)
640
641	! Initialize variable for dynamical heating and zonal wind tendency diagnostic
642	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
643	ztprevious(:,:)=pt(:,:)
644	zuprevious(:,:)=pu(:,:)
645
646	! Set temperature just above condensation temperature (for Early Mars)
647	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
648	if(nearn2cond) then
649	write(,)' WARNING! Starting at Tcond+1K'
650	do l=1, nlayer
651	do ig=1,ngrid
652	pdt(ig,l)= ((-3167.8)/(log(.01*pplay(ig,l))-23.23)+4 &
653	-pt(ig,l)) / ptimestep
654	enddo
655	enddo
656	endif
657
658	if(meanOLR)then
659	call system('rm -f rad_bal.out') ! to record global radiative balance.
660	call system('rm -f tem_bal.out') ! to record global mean/max/min temperatures.
661	call system('rm -f h2o_bal.out') ! to record global hydrological balance.
662	endif
663
664
665	!! Initialize variables for water cycle ! AF24: removed
666
667	! Set metallicity for GCS
668	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
669	metallicity=0.0 ! default value --- is not used here but necessary to call function Psat_generic
670	call getin_p("metallicity",metallicity) ! --- is not used here but necessary to call function Psat_generic
671
672	! Set some parameters for the thermal plume model !AF24: removed
673	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
674
675	#ifndef MESOSCALE
676	if (ngrid.ne.1) then ! Note : no need to create a restart file in 1d.
677	call physdem0("restartfi.nc",longitude,latitude,nsoilmx,ngrid,nlayer,nq, &
678	ptimestep,pday+nday,time_phys,cell_area, &
679	albedo_bareground,inertiedat,zmea,zstd,zsig,zgam,zthe)
680	endif
681
682	!! call WriteField_phy("post_physdem_qsurf",qsurf(1:ngrid,igcm_h2o_vap),1)
683	#endif
684	if (corrk) then
685	! We initialise the spectral grid here instead of
686	! at firstcall of callcorrk so we can output XspecIR, XspecVI
687	! when using Dynamico
688	print*, "physiq_mod: Correlated-k data base folder:",trim(datadir)
689	call getin_p("corrkdir",corrkdir)
690	print*,"corrkdir = ", corrkdir
691	write (tmp1, '(i4)') L_NSPECTI
692	write (tmp2, '(i4)') L_NSPECTV
693	banddir=trim(trim(adjustl(tmp1))//'x'//trim(adjustl(tmp2)))
694	banddir=trim(trim(adjustl(corrkdir))//'/'//trim(adjustl(banddir)))
695	call setspi !Basic infrared properties.
696	call setspv ! Basic visible properties.
697	call sugas_corrk ! Set up gaseous absorption properties.
698	if (aerohaze) then
699	call suaer_corrk ! Set up aerosol optical properties.
700	endif
701	endif
702
703	!! call WriteField_phy("post_corrk_firstcall_qsurf",qsurf(1:ngrid,igcm_h2o_vap),1)
704	! XIOS outputs
705	#ifdef CPP_XIOS
706
707	write(,) "physiq: call initialize_xios_output"
708	call initialize_xios_output(pday,ptime,ptimestep,daysec, &
709	year_day,presnivs,pseudoalt,WNOI,WNOV)
710	#endif
711
712	!! call WriteField_phy("post_xios_qsurf",qsurf(1:ngrid,igcm_h2o_vap),1)
713
714	write(,) "physiq: end of firstcall"
715	endif ! end of 'firstcall'
716
717	!! call WriteField_phy("post_firstcall_qsurf",qsurf(1:ngrid,igcm_h2o_vap),1)
718	!! call writediagfi(ngrid,"firstcall_post_qsurf"," "," ",2,qsurf(1:ngrid,igcm_h2o_vap))
719
720	if (check_physics_inputs) then
721	!check the validity of input fields coming from the dynamics
722	call check_physics_fields("begin physiq:", pt, pu, pv, pplev, pq)
723	endif
724
725	! call writediagfi(ngrid,"pre_physical_rnat"," "," ",2,rnat)
726	! call writediagfi(ngrid,"pre_physical_capcal"," "," ",2,capcal)
727
728	! ------------------------------------------------------
729	! I.2 Initializations done at every physical timestep:
730	! ------------------------------------------------------
731
732	#ifdef CPP_XIOS
733	! update XIOS time/calendar
734	call update_xios_timestep
735	#endif
736
737	! Initialize various variables
738	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
739
740	if ( .not.nearn2cond ) then
741	pdt(1:ngrid,1:nlayer) = 0.0
742	endif
743	zdtsurf(1:ngrid) = 0.0
744	pdq(1:ngrid,1:nlayer,1:nq) = 0.0
745	dqsurf(1:ngrid,1:nq)= 0.0
746	pdu(1:ngrid,1:nlayer) = 0.0
747	pdv(1:ngrid,1:nlayer) = 0.0
748	pdpsrf(1:ngrid) = 0.0
749	zflubid(1:ngrid) = 0.0
750	flux_sens_lat(1:ngrid) = 0.0
751	taux(1:ngrid) = 0.0
752	tauy(1:ngrid) = 0.0
753
754	zday=pday+ptime ! Compute time, in sols (and fraction thereof).
755
756	! Compute Stellar Longitude (Ls), and orbital parameters.
757	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
758	if (season) then
759	call stellarlong(zday,zls)
760	else
761	call stellarlong(noseason_day,zls)
762	end if
763
764
765	! Get Lyman alpha flux at specific Ls
766	if (haze) then
767	call lymalpha(zls,zfluxuv)
768	print*, 'Haze lyman-alpha zls,zfluxuv=',zls,zfluxuv
769	end if
770
771
772	IF (triton) then
773	CALL orbitetriton(zls,zday,dist_star,declin)
774	ELSE
775	call orbite(zls,dist_star,declin,right_ascen)
776	ENDIF
777
778
779	if (diurnal) then
780	zlss=-2.pi(zday-.5)
781	else if(diurnal .eqv. .false.) then
782	zlss=9999.
783	endif
784
785
786	glat(:) = g !AF24: removed oblateness
787
788	! Compute geopotential between layers.
789	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
790	zzlay(1:ngrid,1:nlayer)=pphi(1:ngrid,1:nlayer)
791	do l=1,nlayer
792	zzlay(1:ngrid,l)= zzlay(1:ngrid,l)/glat(1:ngrid)
793	enddo
794
795	zzlev(1:ngrid,1)=0.
796
797	do l=2,nlayer
798	do ig=1,ngrid
799	z1=(pplay(ig,l-1)+pplev(ig,l))/(pplay(ig,l-1)-pplev(ig,l))
800	z2=(pplev(ig,l)+pplay(ig,l))/(pplev(ig,l)-pplay(ig,l))
801	zzlev(ig,l)=(z1zzlay(ig,l-1)+z2zzlay(ig,l))/(z1+z2)
802	enddo
803	enddo
804
805	!Altitude of top interface (nlayer+1), using the thicknesss of the level below the top one. LT22
806
807	zzlev(1:ngrid,nlayer+1) = 2*zzlev(1:ngrid,nlayer)-zzlev(1:ngrid,nlayer-1)
808
809	! Compute potential temperature
810	! Note : Potential temperature calculation may not be the same in physiq and dynamic...
811	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
812	do l=1,nlayer
813	do ig=1,ngrid
814	zpopsk(ig,l)=(pplay(ig,l)/pplev(ig,1))**rcp
815	zh(ig,l)=pt(ig,l)/zpopsk(ig,l)
816	mass(ig,l) = (pplev(ig,l) - pplev(ig,l+1))/glat(ig)
817	massarea(ig,l)=mass(ig,l)*cell_area(ig)
818	enddo
819	enddo
820
821	! Compute vertical velocity (m/s) from vertical mass flux
822	! w = F / (rhoarea) and rho = P/(rT)
823	! But first linearly interpolate mass flux to mid-layers
824	if (.not.fast) then
825	do l=1,nlayer-1
826	pw(1:ngrid,l)=0.5*(flxw(1:ngrid,l)+flxw(1:ngrid,l+1))
827	enddo
828	pw(1:ngrid,nlayer)=0.5*flxw(1:ngrid,nlayer) ! since flxw(nlayer+1)=0
829	do l=1,nlayer
830	pw(1:ngrid,l)=(pw(1:ngrid,l)rpt(1:ngrid,l)) / &
831	(pplay(1:ngrid,l)*cell_area(1:ngrid))
832	enddo
833	! omega in Pa/s
834	do l=1,nlayer-1
835	omega(1:ngrid,l)=0.5*(flxw(1:ngrid,l)+flxw(1:ngrid,l+1))
836	enddo
837	omega(1:ngrid,nlayer)=0.5*flxw(1:ngrid,nlayer) ! since flxw(nlayer+1)=0
838	do l=1,nlayer
839	omega(1:ngrid,l)=g*omega(1:ngrid,l)/cell_area(1:ngrid)
840	enddo
841	endif
842	!---------------------------------
843	! II. Compute radiative tendencies
844	!---------------------------------
845	! Saving qsurf to compute paleo flux condensation/sublimation
846	DO iq=1, nq
847	DO ig=1,ngrid
848	IF (qsurf(ig,iq).lt.0.) then
849	qsurf(ig,iq)=0.
850	ENDIF
851	qsurf1(ig,iq)=qsurf(ig,iq)
852	ENDDO
853	ENDDO
854
855
856	! Compute local stellar zenith angles
857	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
858	if (diurnal) then
859	ztim1=SIN(declin)
860	ztim2=COS(declin)COS(2.pi*(zday-.5))
861	ztim3=-COS(declin)SIN(2.pi*(zday-.5))
862
863	call stelang(ngrid,sinlon,coslon,sinlat,coslat, &
864	ztim1,ztim2,ztim3,mu0,fract)
865	else if(diurnal .eqv. .false.) then
866
867	call mucorr(ngrid,declin,latitude,mu0,fract,10000.,rad)
868	! WARNING: this function appears not to work in 1D
869
870	if ((ngrid.eq.1).and.(global1d)) then ! Fixed zenith angle 'szangle' in 1D simulations w/ globally-averaged sunlight.
871	mu0 = cos(pi*szangle/180.0)
872	endif
873
874	endif
875
876	! AF24: TODO insert surfprop for pluto & triton around here
877
878	if (callrad) then
879	if( mod(icount-1,iradia).eq.0.or.lastcall) then
880
881	! Eclipse incoming sunlight !AF24: removed
882
883	!! call writediagfi(ngrid,"corrk_pre_dqsurf"," "," ",2,dqsurf(1:ngrid,igcm_h2o_vap))
884	!! call writediagfi(ngrid,"corrk_pre_qsurf"," "," ",2,qsurf(1:ngrid,igcm_h2o_vap))
885
886
887	if (corrk) then
888
889	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
890	! II.a Call correlated-k radiative transfer scheme
891	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
892	if(kastprof)then
893	print*,'kastprof should not = true here'
894	call abort
895	endif
896	! if(water) then !AF24: removed
897
898	if(generic_condensation) then
899	do iq=1,nq
900
901	call generic_tracer_index(nq,iq,igcm_generic_vap,igcm_generic_ice,call_ice_vap_generic)
902
903	if (call_ice_vap_generic) then ! to call only one time the ice/vap pair of a tracer
904
905	epsi_generic=constants_epsi_generic(iq)
906
907	muvar(1:ngrid,1:nlayer)=mugaz/(1.e0+(1.e0/epsi_generic-1.e0)*pq(1:ngrid,1:nlayer,igcm_generic_vap))
908	muvar(1:ngrid,nlayer+1)=mugaz/(1.e0+(1.e0/epsi_generic-1.e0)*pq(1:ngrid,nlayer,igcm_generic_vap))
909
910	endif
911	end do ! do iq=1,nq loop on tracers
912	! take into account generic condensable specie (GCS) effect on mean molecular weight
913
914	else
915	muvar(1:ngrid,1:nlayer+1)=mugaz
916	endif
917
918	! if(ok_slab_ocean) then !AF24: removed
919
920	! standard callcorrk
921	! clearsky=.false.
922	call callcorrk(ngrid,nlayer,pq,nq,qsurf, &
923	albedo,albedo_equivalent,emis,mu0,pplev,pplay,pt, &
924	tsurf,fract,dist_star,aerosol,muvar, &
925	zdtlw,zdtsw,fluxsurf_lw,fluxsurf_sw, &
926	fluxsurfabs_sw,fluxtop_lw, &
927	fluxabs_sw,fluxtop_dn,OLR_nu,OSR_nu,GSR_nu, &
928	int_dtaui,int_dtauv, &
929	tau_col,cloudfrac,totcloudfrac, &
930	.false.,firstcall,lastcall)
931
932	!GG (feb2021): Option to "artificially" decrease the raditive time scale in
933	!the deep atmosphere press > 0.1 bar. Suggested by MT.
934	!! COEFF_RAD to be "tuned" to facilitate convergence of tendency
935
936	!coeff_rad=0. ! 0 values, it doesn't accelerate the convergence
937	!coeff_rad=0.5
938	!coeff_rad=1.
939	!do l=1, nlayer
940	! do ig=1,ngrid
941	! if(pplay(ig,l).ge.1.d4) then
942	! zdtsw(ig,l)=zdtsw(ig,l)(pplay(ig,l)/1.d4)*coeff_rad
943	! zdtlw(ig,l)=zdtlw(ig,l)(pplay(ig,l)/1.d4)*coeff_rad
944	! endif
945	! enddo
946	!enddo
947
948	! AF24: removed CLFvarying Option
949
950	! if(ok_slab_ocean) then
951	! tsurf(:)=tsurf2(:)
952	! endif
953
954
955	! Radiative flux from the sky absorbed by the surface (W.m-2).
956	GSR=0.0
957	fluxrad_sky(1:ngrid)=emis(1:ngrid)*fluxsurf_lw(1:ngrid)+fluxsurfabs_sw(1:ngrid)
958
959	!if(noradsurf)then ! no lower surface; SW flux just disappears
960	! GSR = SUM(fluxsurf_sw(1:ngrid)*cell_area(1:ngrid))/totarea
961	! fluxrad_sky(1:ngrid)=emis(1:ngrid)*fluxsurf_lw(1:ngrid)
962	! print*,'SW lost in deep atmosphere = ',GSR,' W m^-2'
963	!endif
964
965	! Net atmospheric radiative heating rate (K.s-1)
966	dtrad(1:ngrid,1:nlayer)=zdtsw(1:ngrid,1:nlayer)+zdtlw(1:ngrid,1:nlayer)
967
968	! Late initialization of the Ice Spectral Albedo. We needed the visible bands to do that !
969	if (firstcall .and. albedo_spectral_mode) then
970	call spectral_albedo_calc(albedo_snow_SPECTV)
971	endif
972
973	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
974	! II.b Call Newtonian cooling scheme !AF24: removed
975	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
976	else
977	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
978	! II.! Atmosphere has no radiative effect
979	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
980	fluxtop_dn(1:ngrid) = fract(1:ngrid)mu0(1:ngrid)Fat1AU/dist_star**2
981	if(ngrid.eq.1)then ! / by 4 globally in 1D case...
982	fluxtop_dn(1) = fract(1)Fat1AU/dist_star*2/2.0
983	endif
984	fluxsurf_sw(1:ngrid) = fluxtop_dn(1:ngrid)
985	print*,'------------WARNING---WARNING------------' ! by MT2015.
986	print*,'You are in corrk=false mode, '
987	print*,'and the surface albedo is taken equal to the first visible spectral value'
988
989	albedo_equivalent(1:ngrid)=albedo(1:ngrid,1)
990	fluxsurfabs_sw(1:ngrid) = fluxtop_dn(1:ngrid)*(1.-albedo(1:ngrid,1))
991	fluxabs_sw(1:ngrid)=fluxsurfabs_sw(1:ngrid)
992	fluxrad_sky(1:ngrid) = fluxsurfabs_sw(1:ngrid)
993	fluxtop_lw(1:ngrid) = emis(1:ngrid)sigmatsurf(1:ngrid)**4
994
995	dtrad(1:ngrid,1:nlayer)=0.0 ! no atmospheric radiative heating
996
997	endif ! end of corrk
998
999	endif ! of if(mod(icount-1,iradia).eq.0)
1000
1001
1002	! Transformation of the radiative tendencies
1003	! ------------------------------------------
1004	zplanck(1:ngrid)=tsurf(1:ngrid)*tsurf(1:ngrid)
1005	zplanck(1:ngrid)=emis(1:ngrid)sigmazplanck(1:ngrid)*zplanck(1:ngrid)
1006	fluxrad(1:ngrid)=fluxrad_sky(1:ngrid)-zplanck(1:ngrid)
1007	pdt(1:ngrid,1:nlayer)=pdt(1:ngrid,1:nlayer)+dtrad(1:ngrid,1:nlayer)
1008
1009	! Test of energy conservation
1010	!----------------------------
1011	if(enertest)then
1012	call planetwide_sumval(cppmassarea(:,:)zdtsw(:,:)/totarea_planet,dEtotSW)
1013	call planetwide_sumval(cppmassarea(:,:)zdtlw(:,:)/totarea_planet,dEtotLW)
1014	!call planetwide_sumval(fluxsurf_sw(:)(1.-albedo_equivalent(:))cell_area(:)/totarea_planet,dEtotsSW) !JL13 carefull, albedo can have changed since the last time we called corrk
1015	call planetwide_sumval(fluxsurfabs_sw(:)*cell_area(:)/totarea_planet,dEtotsSW) !JL13 carefull, albedo can have changed since the last time we called corrk
1016	call planetwide_sumval((fluxsurf_lw(:)emis(:)-zplanck(:))cell_area(:)/totarea_planet,dEtotsLW)
1017	dEzRadsw(:,:)=cppmass(:,:)zdtsw(:,:)
1018	dEzRadlw(:,:)=cppmass(:,:)zdtlw(:,:)
1019	if (is_master) then
1020	print*,'---------------------------------------------------------------'
1021	print*,'In corrk SW atmospheric heating =',dEtotSW,' W m-2'
1022	print*,'In corrk LW atmospheric heating =',dEtotLW,' W m-2'
1023	print*,'atmospheric net rad heating (SW+LW) =',dEtotLW+dEtotSW,' W m-2'
1024	print*,'In corrk SW surface heating =',dEtotsSW,' W m-2'
1025	print*,'In corrk LW surface heating =',dEtotsLW,' W m-2'
1026	print*,'surface net rad heating (SW+LW) =',dEtotsLW+dEtotsSW,' W m-2'
1027	endif
1028	endif ! end of 'enertest'
1029
1030	endif ! of if (callrad)
1031
1032	!! call writediagfi(ngrid,"vdifc_pre_dqsurf"," "," ",2,dqsurf(1:ngrid,igcm_h2o_vap))
1033	!! call writediagfi(ngrid,"vdifc_pre_qsurf"," "," ",2,qsurf(1:ngrid,igcm_h2o_vap))
1034
1035
1036	! --------------------------------------------
1037	! III. Vertical diffusion (turbulent mixing) :
1038	! --------------------------------------------
1039
1040	if (calldifv) then
1041
1042	zflubid(1:ngrid)=fluxrad(1:ngrid)+fluxgrd(1:ngrid)
1043
1044	if (UseVdifcPlutold) then
1045	zflubid(1:ngrid)=fluxrad(1:ngrid)+fluxgrd(1:ngrid)
1046	zdum1(:,:) = 0
1047	zdum2(:,:) = 0
1048	zdh(:,:)=pdt(:,:)/zpopsk(:,:)
1049
1050	! Calling vdif (Martian version WITH N2 condensation)
1051	CALL vdifc_pluto(ngrid,nlayer,nq,zpopsk, &
1052	ptimestep,capcal,lwrite, &
1053	pplay,pplev,zzlay,zzlev,z0, &
1054	pu,pv,zh,pq,pt,tsurf,emis,qsurf, &
1055	zdum1,zdum2,zdh,pdq,pdt,zflubid, &
1056	zdudif,zdvdif,zdhdif,zdtsdif,q2, &
1057	zdqdif,zdqsdif,qsat_ch4,qsat_ch4_l1) !,zq1temp_ch4,qsat_ch4)
1058
1059	pdv(1:ngrid,1:nlayer)=pdv(1:ngrid,1:nlayer)+zdvdif(1:ngrid,1:nlayer)
1060	pdu(1:ngrid,1:nlayer)=pdu(1:ngrid,1:nlayer)+zdudif(1:ngrid,1:nlayer)
1061	pdt(1:ngrid,1:nlayer)=pdt(1:ngrid,1:nlayer)+zdhdif(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer)
1062
1063	zdtdif(1:ngrid,1:nlayer)=zdhdif(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer) ! for diagnostic only
1064	zdtsurf(1:ngrid)=zdtsurf(1:ngrid)+zdtsdif(1:ngrid)
1065
1066	bcond=1./tcond1p4Pa
1067	acond=r/lw_n2
1068
1069	if (tracer) then
1070	pdq(1:ngrid,1:nlayer,1:nq)=pdq(1:ngrid,1:nlayer,1:nq)+ zdqdif(1:ngrid,1:nlayer,1:nq)
1071	dqsurf(1:ngrid,1:nq)=dqsurf(1:ngrid,1:nq) + zdqsdif(1:ngrid,1:nq)
1072	end if ! of if (tracer)
1073
1074	!------------------------------------------------------------------
1075	! test methane conservation
1076	! if(methane)then
1077	! call testconserv(ngrid,nlayer,nq,igcm_ch4_gas,igcm_ch4_ice,
1078	! & ptimestep,pplev,zdqdif,zdqsdif,'CH4',' vdifc ')
1079	! endif ! methane
1080	!------------------------------------------------------------------
1081	! test CO conservation
1082	! if(carbox)then
1083	! call testconserv(ngrid,nlayer,nq,igcm_co_gas,igcm_co_ice,
1084	! & ptimestep,pplev,zdqdif,zdqsdif,'CO ',' vdifc ')
1085	! endif ! carbox
1086	!------------------------------------------------------------------
1087
1088	! JL12 the following if test is temporarily there to allow us to compare the old vdifc with turbdiff.
1089	else if (UseTurbDiff) then
1090
1091	call turbdiff(ngrid,nlayer,nq, &
1092	ptimestep,capcal, &
1093	pplay,pplev,zzlay,zzlev,z0, &
1094	pu,pv,pt,zpopsk,pq,tsurf,emis,qsurf, &
1095	pdt,pdq,zflubid, &
1096	zdudif,zdvdif,zdtdif,zdtsdif, &
1097	sensibFlux,q2,zdqdif,zdqevap,zdqsdif, &
1098	taux,tauy)
1099
1100	else ! if (UseVdifcPlutold) .and. (UseTurbDiff)
1101
1102	zdh(1:ngrid,1:nlayer)=pdt(1:ngrid,1:nlayer)/zpopsk(1:ngrid,1:nlayer)
1103
1104	call vdifc(ngrid,nlayer,nq,zpopsk, &
1105	ptimestep,capcal,lwrite, &
1106	pplay,pplev,zzlay,zzlev,z0, &
1107	pu,pv,zh,pq,tsurf,emis,qsurf, &
1108	zdh,pdq,zflubid, &
1109	zdudif,zdvdif,zdhdif,zdtsdif, &
1110	sensibFlux,q2,zdqdif,zdqsdif)
1111
1112	zdtdif(1:ngrid,1:nlayer)=zdhdif(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer) ! for diagnostic only
1113	zdqevap(1:ngrid,1:nlayer)=0.
1114
1115	end if !end of 'UseTurbDiff'
1116
1117	zdtsurf(1:ngrid)=zdtsurf(1:ngrid)+zdtsdif(1:ngrid)
1118
1119	!!! this is always done, except for turbulence-resolving simulations
1120	if (.not. turb_resolved) then
1121	pdv(1:ngrid,1:nlayer)=pdv(1:ngrid,1:nlayer)+zdvdif(1:ngrid,1:nlayer)
1122	pdu(1:ngrid,1:nlayer)=pdu(1:ngrid,1:nlayer)+zdudif(1:ngrid,1:nlayer)
1123	pdt(1:ngrid,1:nlayer)=pdt(1:ngrid,1:nlayer)+zdtdif(1:ngrid,1:nlayer)
1124	endif
1125
1126	! if(ok_slab_ocean)then !AF24: removed
1127	! flux_sens_lat(1:ngrid)=(zdtsdif(1:ngrid)*capcal(1:ngrid)-fluxrad(1:ngrid))
1128	! endif
1129
1130	!! call writediagfi(ngrid,"vdifc_post_zdqsdif"," "," ",2,zdqsdif(1:ngrid,igcm_h2o_vap))
1131
1132	if (tracer) then
1133	pdq(1:ngrid,1:nlayer,1:nq)=pdq(1:ngrid,1:nlayer,1:nq)+ zdqdif(1:ngrid,1:nlayer,1:nq)
1134	dqsurf(1:ngrid,1:nq)=dqsurf(1:ngrid,1:nq) + zdqsdif(1:ngrid,1:nq)
1135	end if ! of if (tracer)
1136
1137	!! call writediagfi(ngrid,"vdifc_post_dqsurf"," "," ",2,dqsurf(1:ngrid,igcm_h2o_vap))
1138	!! call writediagfi(ngrid,"vdifc_post_qsurf"," "," ",2,qsurf(1:ngrid,igcm_h2o_vap))
1139
1140	! test energy conservation
1141	!-------------------------
1142	if(enertest)then
1143
1144	dEzdiff(:,:)=cppmass(:,:)zdtdif(:,:)
1145	do ig = 1, ngrid
1146	dEdiff(ig)=SUM(dEzdiff (ig,:))+ sensibFlux(ig)! subtract flux to the ground
1147	dEzdiff(ig,1)= dEzdiff(ig,1)+ sensibFlux(ig)! subtract flux to the ground
1148	enddo
1149
1150	call planetwide_sumval(dEdiff(:)*cell_area(:)/totarea_planet,dEtot)
1151	dEdiffs(:)=capcal(:)*zdtsdif(:)-zflubid(:)-sensibFlux(:)
1152	call planetwide_sumval(dEdiffs(:)*cell_area(:)/totarea_planet,dEtots)
1153	call planetwide_sumval(sensibFlux(:)*cell_area(:)/totarea_planet,AtmToSurf_TurbFlux)
1154
1155	if (is_master) then
1156
1157	if (UseTurbDiff) then
1158	print*,'In TurbDiff sensible flux (atm=>surf) =',AtmToSurf_TurbFlux,' W m-2'
1159	print*,'In TurbDiff non-cons atm nrj change =',dEtot,' W m-2'
1160	print*,'In TurbDiff (correc rad+latent heat) surf nrj change =',dEtots,' W m-2'
1161	else
1162	print*,'In vdifc sensible flux (atm=>surf) =',AtmToSurf_TurbFlux,' W m-2'
1163	print*,'In vdifc non-cons atm nrj change =',dEtot,' W m-2'
1164	print*,'In vdifc (correc rad+latent heat) surf nrj change =',dEtots,' W m-2'
1165	end if
1166	endif ! end of 'is_master'
1167
1168	! JL12 : note that the black body radiative flux emitted by the surface has been updated by the implicit scheme but not given back elsewhere.
1169	endif ! end of 'enertest'
1170
1171
1172	! ! Test water conservation. !AF24: removed
1173
1174	else ! calldifv
1175
1176	! if(.not.newtonian)then
1177	zdtsurf(1:ngrid) = zdtsurf(1:ngrid) + (fluxrad(1:ngrid) + fluxgrd(1:ngrid))/capcal(1:ngrid)
1178
1179	endif ! end of 'calldifv'
1180
1181
1182	!-------------------
1183	! IV. Convection :
1184	!-------------------
1185
1186	! ~~~~~~~~~~~~~~~~~~~~~~~~~~
1187	! IV.a Thermal plume model : AF24: removed
1188	! ~~~~~~~~~~~~~~~~~~~~~~~~~~
1189
1190	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1191	! IV.b Dry convective adjustment :
1192	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1193
1194	if(calladj) then
1195
1196	zdh(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer)/zpopsk(1:ngrid,1:nlayer)
1197	zduadj(1:ngrid,1:nlayer)=0.0
1198	zdvadj(1:ngrid,1:nlayer)=0.0
1199	zdhadj(1:ngrid,1:nlayer)=0.0
1200
1201
1202	call convadj(ngrid,nlayer,nq,ptimestep, &
1203	pplay,pplev,zpopsk, &
1204	pu,pv,zh,pq, &
1205	pdu,pdv,zdh,pdq, &
1206	zduadj,zdvadj,zdhadj, &
1207	zdqadj)
1208
1209	pdu(1:ngrid,1:nlayer) = pdu(1:ngrid,1:nlayer) + zduadj(1:ngrid,1:nlayer)
1210	pdv(1:ngrid,1:nlayer) = pdv(1:ngrid,1:nlayer) + zdvadj(1:ngrid,1:nlayer)
1211	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer) + zdhadj(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer)
1212	zdtadj(1:ngrid,1:nlayer) = zdhadj(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer) ! for diagnostic only
1213
1214	if(tracer) then
1215	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + zdqadj(1:ngrid,1:nlayer,1:nq)
1216	end if
1217
1218	! Test energy conservation
1219	if(enertest)then
1220	call planetwide_sumval(cppmassarea(:,:)zdtadj(:,:)/totarea_planet,dEtot)
1221	if (is_master) print*,'In convadj atmospheric energy change =',dEtot,' W m-2'
1222	endif
1223
1224	! ! Test water conservation !AF24: removed
1225
1226	endif ! end of 'calladj'
1227	!----------------------------------------------
1228	! Non orographic Gravity Waves: AF24: removed
1229	!---------------------------------------------
1230
1231	!-----------------------------------------------
1232	! V. Nitrogen condensation-sublimation :
1233	!-----------------------------------------------
1234
1235	if (n2cond) then
1236
1237	if (.not.tracer) then
1238	print*,'We need a N2 ice tracer to condense N2'
1239	call abort
1240	endif
1241
1242	call condense_n2(ngrid,nlayer,nq,ptimestep, &
1243	capcal,pplay,pplev,tsurf,pt, &
1244	pphi,pdt,pdu,pdv,zdtsurf,pu,pv,pq,pdq, &
1245	qsurf(1,igcm_n2),albedo,emis, &
1246	zdtc,zdtsurfc,pdpsrf,zduc,zdvc, &
1247	zdqc,zdqsc(1,igcm_n2))
1248
1249	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer)+zdtc(1:ngrid,1:nlayer)
1250	pdv(1:ngrid,1:nlayer) = pdv(1:ngrid,1:nlayer)+zdvc(1:ngrid,1:nlayer)
1251	pdu(1:ngrid,1:nlayer) = pdu(1:ngrid,1:nlayer)+zduc(1:ngrid,1:nlayer)
1252	zdtsurf(1:ngrid) = zdtsurf(1:ngrid) + zdtsurfc(1:ngrid)
1253
1254	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq)+ zdqc(1:ngrid,1:nlayer,1:nq)
1255	dqsurf(1:ngrid,igcm_n2) = dqsurf(1:ngrid,igcm_n2) + zdqsc(1:ngrid,igcm_n2)
1256
1257	!! call writediagfi(ngrid,"condense_n2_post_dqsurf"," "," ",2,dqsurf(1:ngrid,igcm_h2o_vap))
1258	!! call writediagfi(ngrid,"condense_n2_post_qsurf"," "," ",2,qsurf(1:ngrid,igcm_h2o_vap))
1259
1260	! test energy conservation
1261	if(enertest)then
1262	call planetwide_sumval(cppmassarea(:,:)zdtc(:,:)/totarea_planet,dEtot)
1263	call planetwide_sumval(capcal(:)zdtsurfc(:)cell_area(:)/totarea_planet,dEtots)
1264	if (is_master) then
1265	print*,'In n2cloud atmospheric energy change =',dEtot,' W m-2'
1266	print*,'In n2cloud surface energy change =',dEtots,' W m-2'
1267	endif
1268	endif
1269
1270	endif ! end of 'n2cond'
1271
1272
1273	!---------------------------------------------
1274	! VI. Specific parameterizations for tracers
1275	!---------------------------------------------
1276
1277	if (tracer) then
1278
1279
1280
1281	! 7a. Methane, CO, and ice
1282	! ---------------------------------------
1283	! Methane ice condensation in the atmosphere
1284	! ----------------------------------------
1285	zdqch4cloud(:,:,:)=0.
1286	if ((methane).and.(metcloud).and.(.not.fast)) THEN
1287	call ch4cloud(ngrid,nlayer,naerkind,ptimestep, &
1288	pplev,pplay,pdpsrf,zzlev,zzlay, pt,pdt, &
1289	pq,pdq,zdqch4cloud,zdqsch4cloud,zdtch4cloud, &
1290	nq,rice_ch4)
1291
1292	DO l=1,nlayer
1293	DO ig=1,ngrid
1294	pdq(ig,l,igcm_ch4_gas)=pdq(ig,l,igcm_ch4_gas)+ &
1295	zdqch4cloud(ig,l,igcm_ch4_gas)
1296	pdq(ig,l,igcm_ch4_ice)=pdq(ig,l,igcm_ch4_ice)+ &
1297	zdqch4cloud(ig,l,igcm_ch4_ice)
1298	ENDDO
1299	ENDDO
1300
1301	! Increment methane ice surface tracer tendency
1302	DO ig=1,ngrid
1303	dqsurf(ig,igcm_ch4_ice)=dqsurf(ig,igcm_ch4_ice)+ &
1304	zdqsch4cloud(ig,igcm_ch4_ice)
1305	ENDDO
1306
1307	! update temperature tendancy
1308	DO ig=1,ngrid
1309	DO l=1,nlayer
1310	pdt(ig,l)=pdt(ig,l)+zdtch4cloud(ig,l)
1311	ENDDO
1312	ENDDO
1313	else
1314	rice_ch4(:,:)=0 ! initialization needed for callsedim
1315	end if
1316
1317	! ---------------------------------------
1318	! CO ice condensation in the atmosphere
1319	! ----------------------------------------
1320	zdqcocloud(:,:,:)=0.
1321	IF ((carbox).and.(monoxcloud).and.(.not.fast)) THEN
1322	call cocloud(ngrid,nlayer,naerkind,ptimestep, &
1323	pplev,pplay,pdpsrf,zzlev,zzlay, pt,pdt, &
1324	pq,pdq,zdqcocloud,zdqscocloud,zdtcocloud, &
1325	nq,rice_co,qsurf(1,igcm_n2),dqsurf(1,igcm_n2))
1326
1327	DO l=1,nlayer
1328	DO ig=1,ngrid
1329	pdq(ig,l,igcm_co_gas)=pdq(ig,l,igcm_co_gas)+ &
1330	zdqcocloud(ig,l,igcm_co_gas)
1331	pdq(ig,l,igcm_co_ice)=pdq(ig,l,igcm_co_ice)+ &
1332	zdqcocloud(ig,l,igcm_co_ice)
1333	ENDDO
1334	ENDDO
1335
1336	! Increment CO ice surface tracer tendency
1337	DO ig=1,ngrid
1338	dqsurf(ig,igcm_co_ice)=dqsurf(ig,igcm_co_ice)+ &
1339	zdqscocloud(ig,igcm_co_ice)
1340	ENDDO
1341
1342	! update temperature tendancy
1343	DO ig=1,ngrid
1344	DO l=1,nlayer
1345	pdt(ig,l)=pdt(ig,l)+zdtcocloud(ig,l)
1346	ENDDO
1347	ENDDO
1348	ELSE
1349	rice_co(:,:)=0 ! initialization needed for callsedim
1350	END IF ! of IF (carbox)
1351
1352	!------------------------------------------------------------------
1353	! test methane conservation
1354	! if(methane)then
1355	! call testconserv(ngrid,nlayer,nq,igcm_ch4_gas,igcm_ch4_ice,
1356	! & ptimestep,pplev,zdqch4cloud,zdqsch4cloud,'CH4','ch4clou')
1357	! endif ! methane
1358	!------------------------------------------------------------------
1359	! test CO conservation
1360	! if(carbox)then
1361	! call testconserv(ngrid,nlayer,nq,igcm_co_gas,igcm_co_ice,
1362	! & ptimestep,pplev,zdqcocloud,zdqscocloud,'CO ','cocloud')
1363	! endif ! carbox
1364	!------------------------------------------------------------------
1365
1366	! 7b. Haze particle production
1367	! -------------------
1368	IF (haze) THEN
1369
1370	zdqphot_prec(:,:)=0.
1371	zdqphot_ch4(:,:)=0.
1372	! Forcing to a fixed haze profile if haze_proffix
1373	if (haze_proffix.and.i_haze.gt.0.) then
1374	call haze_prof(ngrid,nlayer,zzlay,pplay,pt, &
1375	reffrad,profmmr)
1376	zdqhaze(:,:,i_haze)=(profmmr(:,:)-pq(:,:,igcm_haze)) &
1377	/ptimestep
1378	else
1379	call hazecloud(ngrid,nlayer,nq,ptimestep, &
1380	pplay,pplev,pq,pdq,dist_star,mu0,zfluxuv,zdqhaze, &
1381	zdqphot_prec,zdqphot_ch4,zdqconv_prec,declin)
1382	endif
1383
1384	DO iq=1, nq ! should be updated
1385	DO l=1,nlayer
1386	DO ig=1,ngrid
1387	pdq(ig,l,iq)=pdq(ig,l,iq)+ zdqhaze(ig,l,iq)
1388	ENDDO
1389	ENDDO
1390	ENDDO
1391
1392	ENDIF
1393
1394	IF (fast.and.fasthaze) THEN
1395	call prodhaze(ngrid,nlayer,nq,ptimestep,pplev,pq,pdq,dist_star, &
1396	mu0,declin,zdqprodhaze,zdqsprodhaze,gradflux,fluxbot, &
1397	fluxlym_sol_bot,fluxlym_ipm_bot,flym_sol,flym_ipm)
1398
1399	DO ig=1,ngrid
1400	pdq(ig,1,igcm_ch4_gas)=pdq(ig,1,igcm_ch4_gas)+ &
1401	zdqprodhaze(ig,igcm_ch4_gas)
1402	pdq(ig,1,igcm_prec_haze)=pdq(ig,1,igcm_prec_haze)+ &
1403	zdqprodhaze(ig,igcm_prec_haze)
1404	pdq(ig,1,igcm_haze)=abs(pdq(ig,1,igcm_haze)+ &
1405	zdqprodhaze(ig,igcm_haze))
1406	qsurf(ig,igcm_haze)= qsurf(ig,igcm_haze)+ &
1407	zdqsprodhaze(ig)*ptimestep
1408	ENDDO
1409
1410	ENDIF
1411
1412
1413
1414	! -------------------------
1415	! VI.3. Aerosol particles
1416	! -------------------------
1417
1418	!Generic Condensation
1419	if (generic_condensation) then
1420	call condensation_generic(ngrid,nlayer,nq,ptimestep,pplev,pplay, &
1421	pt,pq,pdt,pdq,dt_generic_condensation, &
1422	dqvaplscale_generic,dqcldlscale_generic,rneb_generic)
1423	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer)+dt_generic_condensation(1:ngrid,1:nlayer)
1424	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq)+dqvaplscale_generic(1:ngrid,1:nlayer,1:nq)
1425	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq)+dqcldlscale_generic(1:ngrid,1:nlayer,1:nq)
1426
1427	if(enertest)then
1428	do ig=1,ngrid
1429	genericconddE(ig) = cppSUM(mass(:,:)dt_generic_condensation(:,:))
1430	enddo
1431
1432	call planetwide_sumval(cppmassarea(:,:)dt_generic_condensation(:,:)/totarea_planet,dEtot)
1433
1434	if (is_master) print*,'In generic condensation atmospheric energy change =',dEtot,' W m-2'
1435	end if
1436
1437	! if (.not. water) then
1438	! Compute GCS (Generic Condensable Specie) cloud fraction. For now we can not have both water cloud fraction and GCS cloud fraction
1439	! Water is the priority
1440	! If you have set water and generic_condensation, then cloudfrac will be water cloudfrac
1441	!
1442	! If you have set generic_condensation (and not water) and you have set several GCS
1443	! then cloudfrac will be only the cloudfrac of the last generic tracer
1444	! (Because it is rewritten every tracer in the loop)
1445	!
1446	! Maybe one should create a cloudfrac_generic(ngrid,nlayer,nq) with 3 dimensions, the last one for tracers
1447
1448	! Let's loop on tracers
1449	cloudfrac(:,:)=0.0
1450	do iq=1,nq
1451	call generic_tracer_index(nq,iq,igcm_generic_vap,igcm_generic_ice,call_ice_vap_generic)
1452	if (call_ice_vap_generic) then ! to call only one time the ice/vap pair of a tracer
1453	do l = 1, nlayer
1454	do ig=1,ngrid
1455	cloudfrac(ig,l)=rneb_generic(ig,l,iq)
1456	enddo
1457	enddo
1458	endif
1459	end do ! do iq=1,nq loop on tracers
1460	! endif ! .not. water
1461
1462	endif !generic_condensation
1463
1464	!Generic Rain !AF24: removed
1465
1466	! Sedimentation.
1467	if (sedimentation) then
1468
1469	zdqsed(1:ngrid,1:nlayer,1:nq) = 0.0
1470	zdqssed(1:ngrid,1:nq) = 0.0
1471
1472	! if(watertest)then !AF24: removed
1473
1474	call callsedim(ngrid,nlayer,ptimestep, &
1475	pplev,zzlev,pt,pdt,pq,pdq, &
1476	zdqsed,zdqssed,nq)
1477
1478	! if(watertest)then !AF24: removed
1479
1480	! Whether it falls as rain or snow depends only on the surface temperature
1481	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + zdqsed(1:ngrid,1:nlayer,1:nq)
1482	dqsurf(1:ngrid,1:nq) = dqsurf(1:ngrid,1:nq) + zdqssed(1:ngrid,1:nq)
1483
1484	!! call writediagfi(ngrid,"callsedim_post_dqsurf"," "," ",2,dqsurf(1:ngrid,igcm_h2o_vap))
1485
1486	! ! Test water conservation !AF24: removed
1487
1488	end if ! end of 'sedimentation'
1489
1490	!! call writediagfi(ngrid,"mass_redist_pre_dqsurf"," "," ",2,dqsurf(1:ngrid,igcm_h2o_vap))
1491	!! call writediagfi(ngrid,"mass_redist_pre_qsurf"," "," ",2,qsurf(1:ngrid,igcm_h2o_vap))
1492
1493	! ---------------
1494	! VI.4. Updates
1495	! ---------------
1496
1497	! Updating Atmospheric Mass and Tracers budgets.
1498	if(mass_redistrib) then
1499
1500	zdmassmr(1:ngrid,1:nlayer) = mass(1:ngrid,1:nlayer) * 0
1501	! ( zdqevap(1:ngrid,1:nlayer) &
1502	! ! + zdqrain(1:ngrid,1:nlayer,igcm_h2o_vap) &
1503	! ! + dqmoist(1:ngrid,1:nlayer,igcm_h2o_vap) &
1504	! + dqvaplscale(1:ngrid,1:nlayer) )
1505
1506	do ig = 1, ngrid
1507	zdmassmr_col(ig)=SUM(zdmassmr(ig,1:nlayer))
1508	enddo
1509
1510	! call writediagfi(ngrid,"mass_evap","mass gain"," ",3,zdmassmr)
1511	! call writediagfi(ngrid,"mass_evap_col","mass gain col"," ",2,zdmassmr_col)
1512	call writediagfi(ngrid,"mass","mass","kg/m2",3,mass)
1513
1514	call mass_redistribution(ngrid,nlayer,nq,ptimestep, &
1515	capcal,pplay,pplev,pt,tsurf,pq,qsurf, &
1516	pu,pv,pdt,zdtsurf,pdq,pdu,pdv,zdmassmr, &
1517	zdtmr,zdtsurfmr,zdpsrfmr,zdumr,zdvmr,zdqmr,zdqsurfmr)
1518
1519	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + zdqmr(1:ngrid,1:nlayer,1:nq)
1520	dqsurf(1:ngrid,1:nq) = dqsurf(1:ngrid,1:nq) + zdqsurfmr(1:ngrid,1:nq)
1521	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer) + zdtmr(1:ngrid,1:nlayer)
1522	pdu(1:ngrid,1:nlayer) = pdu(1:ngrid,1:nlayer) + zdumr(1:ngrid,1:nlayer)
1523	pdv(1:ngrid,1:nlayer) = pdv(1:ngrid,1:nlayer) + zdvmr(1:ngrid,1:nlayer)
1524	pdpsrf(1:ngrid) = pdpsrf(1:ngrid) + zdpsrfmr(1:ngrid)
1525	zdtsurf(1:ngrid) = zdtsurf(1:ngrid) + zdtsurfmr(1:ngrid)
1526
1527	endif
1528
1529	! call writediagfi(ngrid,"mass_redistribution_post_dqsurf"," "," ",2,dqsurf(1:ngrid,igcm_h2o_vap))
1530
1531	!! call writediagfi(ngrid,"slab_pre_dqsurf"," "," ",2,dqsurf(1:ngrid,igcm_h2o_vap))
1532	!! call writediagfi(ngrid,"slab_pre_qsurf"," "," ",2,qsurf(1:ngrid,igcm_h2o_vap))
1533
1534
1535	! ------------------
1536	! VI.5. Slab Ocean !AF24: removed
1537	! ------------------
1538
1539	! -----------------------------
1540	! VI.6. Surface Tracer Update
1541	! -----------------------------
1542
1543	! AF24: deleted hydrology
1544
1545	qsurf(1:ngrid,1:nq) = qsurf(1:ngrid,1:nq) + ptimestep*dqsurf(1:ngrid,1:nq)
1546
1547	! Add qsurf to qsurf_hist, which is what we save in diagfi.nc. At the same time, we set the water
1548	! content of ocean gridpoints back to zero, in order to avoid rounding errors in vdifc, rain.
1549	qsurf_hist(:,:) = qsurf(:,:)
1550
1551	! if(ice_update)then
1552	! ice_min(1:ngrid)=min(ice_min(1:ngrid),qsurf(1:ngrid,igcm_h2o_ice))
1553	! endif
1554
1555	endif! end of if 'tracer'
1556
1557	if (conservn2) then
1558	write(,) 'conservn2 tracer'
1559	! call testconservmass(ngrid,nlayer,pplev(:,1)+ &
1560	! pdpsrf(:)*ptimestep,qsurf(:,1))
1561	endif
1562
1563	DO ig=1,ngrid
1564	flusurf(ig,igcm_n2)=(qsurf(ig,igcm_n2)- &
1565	qsurf1(ig,igcm_n2))/ptimestep
1566	flusurfold(ig,igcm_n2)=flusurf(ig,igcm_n2)
1567	if (methane) then
1568	flusurf(ig,igcm_ch4_ice)=(qsurf(ig,igcm_ch4_ice)- &
1569	qsurf1(ig,igcm_ch4_ice))/ptimestep
1570	flusurfold(ig,igcm_ch4_ice)=flusurf(ig,igcm_ch4_ice)
1571	endif
1572	if (carbox) then
1573	flusurf(ig,igcm_co_ice)=(qsurf(ig,igcm_co_ice)- &
1574	qsurf1(ig,igcm_co_ice))/ptimestep
1575	!flusurfold(ig,igcm_co_ice)=flusurf(ig,igcm_co_ice)
1576	endif
1577	ENDDO
1578
1579	!! Special source of haze particle !
1580	! todo: should be placed in haze and use tendency of n2 instead of flusurf
1581	IF (source_haze) THEN
1582	! call hazesource(ngrid,nlayer,nq,ptimestep, &
1583	! pplev,flusurf,mu0,zdq_source)
1584
1585	DO iq=1, nq
1586	DO l=1,nlayer
1587	DO ig=1,ngrid
1588	pdq(ig,l,iq)=pdq(ig,l,iq)+zdq_source(ig,l,iq)
1589	ENDDO
1590	ENDDO
1591	ENDDO
1592	ENDIF
1593
1594
1595	!------------------------------------------------
1596	! VII. Surface and sub-surface soil temperature
1597	!------------------------------------------------
1598
1599	! For diagnostic
1600	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1601	DO ig=1,ngrid
1602	rho(ig,1) = pplay(ig,1)/(r*pt(ig,1))
1603	sensiblehf1(ig)=rho(ig,1)cpp(0.4/log(zzlay(ig,1)/z0))*2 &
1604	(pu(ig,1)pu(ig,1)+pv(ig,1)pv(ig,1))*0.5 &
1605	(tsurf(ig)-pt(ig,1))
1606	sensiblehf2(ig)=zflubid(ig)-capcal(ig)*zdtsdif(ig)
1607
1608	ENDDO
1609
1610
1611	! ! Increment surface temperature
1612	! if(ok_slab_ocean)then !AF24: removed
1613
1614	tsurf(1:ngrid)=tsurf(1:ngrid)+ptimestep*zdtsurf(1:ngrid)
1615	! Compute soil temperatures and subsurface heat flux.
1616	if (callsoil) then
1617	call soil(ngrid,nsoilmx,.false.,lastcall,inertiedat, &
1618	ptimestep,tsurf,tsoil,capcal,fluxgrd)
1619	endif
1620
1621
1622	! if (ok_slab_ocean) then !AF24: removed
1623
1624	! Test energy conservation
1625	if(enertest)then
1626	call planetwide_sumval(cell_area(:)capcal(:)zdtsurf(:)/totarea_planet,dEtots)
1627	if (is_master) print*,'Surface energy change =',dEtots,' W m-2'
1628	endif
1629
1630
1631	!---------------------------------------------------
1632	! VIII. Perform diagnostics and write output files
1633	!---------------------------------------------------
1634
1635	! Note : For output only: the actual model integration is performed in the dynamics.
1636
1637
1638	! Temperature, zonal and meridional winds.
1639	zt(1:ngrid,1:nlayer) = pt(1:ngrid,1:nlayer) + pdt(1:ngrid,1:nlayer)*ptimestep
1640	zu(1:ngrid,1:nlayer) = pu(1:ngrid,1:nlayer) + pdu(1:ngrid,1:nlayer)*ptimestep
1641	zv(1:ngrid,1:nlayer) = pv(1:ngrid,1:nlayer) + pdv(1:ngrid,1:nlayer)*ptimestep
1642
1643	!! Recast thermal plume vertical velocity array for outputs
1644	!! AF24: removed
1645
1646	! Diagnostic.
1647	zdtdyn(1:ngrid,1:nlayer) = (pt(1:ngrid,1:nlayer)-ztprevious(1:ngrid,1:nlayer)) / ptimestep
1648	ztprevious(1:ngrid,1:nlayer) = zt(1:ngrid,1:nlayer)
1649
1650	zdudyn(1:ngrid,1:nlayer) = (pu(1:ngrid,1:nlayer)-zuprevious(1:ngrid,1:nlayer)) / ptimestep
1651	zuprevious(1:ngrid,1:nlayer) = zu(1:ngrid,1:nlayer)
1652
1653	if(firstcall)then
1654	zdtdyn(1:ngrid,1:nlayer)=0.0
1655	zdudyn(1:ngrid,1:nlayer)=0.0
1656	endif
1657
1658	! Dynamical heating diagnostic.
1659	do ig=1,ngrid
1660	fluxdyn(ig)= SUM(zdtdyn(ig,:) mass(ig,:))cpp
1661	enddo
1662
1663	! Tracers.
1664	zq(1:ngrid,1:nlayer,1:nq) = pq(1:ngrid,1:nlayer,1:nq) + pdq(1:ngrid,1:nlayer,1:nq)*ptimestep
1665
1666	! Surface pressure.
1667	ps(1:ngrid) = pplev(1:ngrid,1) + pdpsrf(1:ngrid)*ptimestep
1668
1669	! pressure density !pluto specific
1670	IF (.not.fast) then !
1671	do ig=1,ngrid
1672	do l=1,nlayer
1673	zplev(ig,l)=pplev(ig,l)/pplev(ig,1)*ps(ig)
1674	zplay(ig,l)=pplay(ig,l)/pplev(ig,1)*ps(ig)
1675	rho(ig,l) = zplay(ig,l)/(r*zt(ig,l))
1676	enddo
1677	zplev(ig,nlayer+1)=pplev(ig,nlayer+1)/pplev(ig,1)*ps(ig)
1678	enddo
1679	ENDIF
1680
1681
1682	! Surface and soil temperature information
1683	call planetwide_sumval(cell_area(:)*tsurf(:)/totarea_planet,Ts1)
1684	call planetwide_minval(tsurf(:),Ts2)
1685	call planetwide_maxval(tsurf(:),Ts3)
1686	if(callsoil)then
1687	TsS = SUM(cell_area(:)*tsoil(:,nsoilmx))/totarea ! mean temperature at bottom soil layer
1688	if (is_master) then
1689	print*,' ave[Tsurf] min[Tsurf] max[Tsurf] ave[Tdeep]'
1690	print*,Ts1,Ts2,Ts3,TsS
1691	end if
1692	else
1693	if (is_master) then
1694	print*,' ave[Tsurf] min[Tsurf] max[Tsurf]'
1695	print*,Ts1,Ts2,Ts3
1696	endif
1697	end if
1698
1699
1700	! Check the energy balance of the simulation during the run
1701	if(corrk)then
1702
1703	call planetwide_sumval(cell_area(:)*fluxtop_dn(:)/totarea_planet,ISR)
1704	call planetwide_sumval(cell_area(:)*fluxabs_sw(:)/totarea_planet,ASR)
1705	call planetwide_sumval(cell_area(:)*fluxtop_lw(:)/totarea_planet,OLR)
1706	call planetwide_sumval(cell_area(:)*fluxgrd(:)/totarea_planet,GND)
1707	call planetwide_sumval(cell_area(:)*fluxdyn(:)/totarea_planet,DYN)
1708	do ig=1,ngrid
1709	if(fluxtop_dn(ig).lt.0.0)then
1710	print*,'fluxtop_dn has gone crazy'
1711	print*,'fluxtop_dn=',fluxtop_dn(ig)
1712	print*,'tau_col=',tau_col(ig)
1713	print*,'aerosol=',aerosol(ig,:,:)
1714	print*,'temp= ',pt(ig,:)
1715	print*,'pplay= ',pplay(ig,:)
1716	call abort
1717	endif
1718	end do
1719
1720	if(ngrid.eq.1)then
1721	DYN=0.0
1722	endif
1723
1724	if (is_master) then
1725	print*,' ISR ASR OLR GND DYN [W m^-2]'
1726	print*, ISR,ASR,OLR,GND,DYN
1727	endif
1728
1729	if(enertest .and. is_master)then
1730	print*,'SW flux/heating difference SW++ - ASR = ',dEtotSW+dEtotsSW-ASR,' W m-2'
1731	print*,'LW flux/heating difference LW++ - OLR = ',dEtotLW+dEtotsLW+OLR,' W m-2'
1732	print*,'LW energy balance LW++ + ASR = ',dEtotLW+dEtotsLW+ASR,' W m-2'
1733	endif
1734
1735	if(meanOLR .and. is_master)then
1736	if((ngrid.gt.1) .or. (mod(icount-1,ecritphy).eq.0))then
1737	! to record global radiative balance
1738	open(92,file="rad_bal.out",form='formatted',position='append')
1739	write(92,*) zday,ISR,ASR,OLR
1740	close(92)
1741	open(93,file="tem_bal.out",form='formatted',position='append')
1742	if(callsoil)then
1743	write(93,*) zday,Ts1,Ts2,Ts3,TsS
1744	else
1745	write(93,*) zday,Ts1,Ts2,Ts3
1746	endif
1747	close(93)
1748	endif
1749	endif
1750
1751	endif ! end of 'corrk'
1752
1753
1754	! Diagnostic to test radiative-convective timescales in code.
1755	if(testradtimes)then
1756	open(38,file="tau_phys.out",form='formatted',position='append')
1757	ig=1
1758	do l=1,nlayer
1759	write(38,*) -1./pdt(ig,l),pt(ig,l),pplay(ig,l)
1760	enddo
1761	close(38)
1762	print*,'As testradtimes enabled,'
1763	print*,'exiting physics on first call'
1764	call abort
1765	endif
1766
1767
1768	! Compute column amounts (kg m-2) if tracers are enabled.
1769	if(tracer)then
1770	qcol(1:ngrid,1:nq)=0.0
1771	do iq=1,nq
1772	do ig=1,ngrid
1773	qcol(ig,iq) = SUM( zq(ig,1:nlayer,iq) * mass(ig,1:nlayer))
1774	enddo
1775	enddo
1776
1777	endif ! end of 'tracer'
1778
1779
1780	! ! Test for water conservation. !AF24: removed
1781
1782	! Calculate RH_generic (Generic Relative Humidity) for diagnostic.
1783	if(generic_condensation)then
1784	RH_generic(:,:,:)=0.0
1785	do iq=1,nq
1786
1787	call generic_tracer_index(nq,iq,igcm_generic_vap,igcm_generic_ice,call_ice_vap_generic)
1788
1789	if (call_ice_vap_generic) then ! to call only one time the ice/vap pair of a tracer
1790
1791	do l = 1, nlayer
1792	do ig=1,ngrid
1793	call Psat_generic(zt(ig,l),pplay(ig,l),metallicity,psat_tmp_generic,qsat_generic(ig,l,iq))
1794	RH_generic(ig,l,iq) = zq(ig,l,igcm_generic_vap) / qsat_generic(ig,l,iq)
1795	enddo
1796	enddo
1797
1798	end if
1799
1800	end do ! iq=1,nq
1801
1802	endif ! end of 'generic_condensation'
1803
1804
1805	if (methane) then
1806	IF (fast) then ! zq is the mixing ratio supposingly mixed in all atmosphere
1807	DO ig=1,ngrid
1808	vmr_ch4(ig)=zq(ig,1,igcm_ch4_gas)* &
1809	mmol(igcm_n2)/mmol(igcm_ch4_gas)*100.
1810	ENDDO
1811	ELSE
1812	DO ig=1,ngrid
1813	! compute vmr methane
1814	vmr_ch4(ig)=qcol(ig,igcm_ch4_gas)* &
1815	g/ps(ig)mmol(igcm_n2)/mmol(igcm_ch4_gas)100.
1816	! compute density methane
1817	DO l=1,nlayer
1818	zrho_ch4(ig,l)=zq(ig,l,igcm_ch4_gas)*rho(ig,l)
1819	ENDDO
1820	ENDDO
1821	ENDIF
1822	endif
1823
1824	if (carbox) then
1825	IF (fast) then
1826	DO ig=1,ngrid
1827	vmr_co(ig)=zq(ig,1,igcm_co_gas)* &
1828	mmol(igcm_n2)/mmol(igcm_co_gas)*100.
1829	ENDDO
1830	ELSE
1831	DO ig=1,ngrid
1832	! compute vmr CO
1833	vmr_co(ig)=qcol(ig,igcm_co_gas)* &
1834	g/ps(ig)mmol(igcm_n2)/mmol(igcm_co_gas)100.
1835	! compute density CO
1836	DO l=1,nlayer
1837	zrho_co(ig,l)=zq(ig,l,igcm_co_gas)*rho(ig,l)
1838	ENDDO
1839	ENDDO
1840	ENDIF
1841	endif
1842
1843	zrho_haze(:,:)=0.
1844	zdqrho_photprec(:,:)=0.
1845	IF (haze.and.aerohaze) then
1846	DO ig=1,ngrid
1847	DO l=1,nlayer
1848	zrho_haze(ig,l)=zq(ig,l,igcm_haze)*rho(ig,l)
1849	zdqrho_photprec(ig,l)=zdqphot_prec(ig,l)*rho(ig,l)
1850	ENDDO
1851	ENDDO
1852	ENDIF
1853
1854	IF (fasthaze) then
1855	DO ig=1,ngrid
1856	qcol(ig,igcm_haze)=zq(ig,1,igcm_haze)*pplev(ig,1)/g
1857	qcol(ig,igcm_prec_haze)=zq(ig,1,igcm_prec_haze)*pplev(ig,1)/g
1858	ENDDO
1859	ENDIF
1860
1861	! Info about Ls, declin...
1862	IF (fast) THEN
1863	if (is_master) write(,),'Ls=',zls180./pi,' dec=',declin180./pi
1864	if (is_master) write(,),'zday=',zday,' ps=',globave
1865	IF (lastcall) then
1866	if (is_master) write(,),'lastcall'
1867	ENDIF
1868	ELSE
1869	if (is_master) write(,),'Ls=',zls180./pi,'decli=',declin180./pi,'zday=',zday
1870	ENDIF
1871
1872	lecttsoil=0 ! default value for lecttsoil
1873	call getin_p("lecttsoil",lecttsoil)
1874	IF (lastcall.and.(ngrid.EQ.1).and.(lecttsoil.eq.1)) THEN
1875	! save tsoil temperature profile for 1D profile
1876	OPEN(13,file='proftsoil.out',form='formatted')
1877	DO i=1,nsoilmx
1878	write(13,*) tsoil(1,i)
1879	ENDDO
1880	CLOSE(13)
1881	ENDIF
1882
1883
1884	if (is_master) print,'--> Ls =',zls180./pi
1885
1886
1887	!----------------------------------------------------------------------
1888	! Writing NetCDF file "RESTARTFI" at the end of the run
1889	!----------------------------------------------------------------------
1890
1891	! Note: 'restartfi' is stored just before dynamics are stored
1892	! in 'restart'. Between now and the writting of 'restart',
1893	! there will have been the itau=itau+1 instruction and
1894	! a reset of 'time' (lastacll = .true. when itau+1= itaufin)
1895	! thus we store for time=time+dtvr
1896
1897
1898
1899	if(lastcall) then
1900	ztime_fin = ptime + ptimestep/(float(iphysiq)*daysec)
1901
1902	!! Update surface ice distribution to iterate to steady state if requested
1903	!! AF24: removed
1904
1905	! endif
1906	if (paleo) then
1907	! time range for tendencies of ice flux qsurfyear
1908	zdt_tot=year_day ! Last year of simulation
1909
1910	masslost(:)=0.
1911	massacc(:)=0.
1912
1913	DO ig=1,ngrid
1914	! update new reservoir of ice on the surface
1915	DO iq=1,nq
1916	! kg/m2 to be sublimed or condensed during paleoyears
1917	qsurfyear(ig,iq)=qsurfyear(ig,iq)* &
1918	paleoyears365.25/(zdt_totdaysec/86400.)
1919
1920	! special case if we sublime the entire reservoir
1921	!! AF: TODO : fix following lines (real_area), using line below:
1922	! call planetwide_sumval((-qsurfyear(:,iq)-qsurf(:,iq))*cell_area(:),masslost)
1923
1924	! IF (-qsurfyear(ig,iq).gt.qsurf(ig,iq)) THEN
1925	! masslost(iq)=masslost(iq)+real_area(ig)* &
1926	! (-qsurfyear(ig,iq)-qsurf(ig,iq))
1927	! qsurfyear(ig,iq)=-qsurf(ig,iq)
1928	! ENDIF
1929
1930	! IF (qsurfyear(ig,iq).gt.0.) THEN
1931	! massacc(iq)=massacc(iq)+real_area(ig)*qsurfyear(ig,iq)
1932	! ENDIF
1933
1934
1935	ENDDO
1936	ENDDO
1937
1938	DO ig=1,ngrid
1939	DO iq=1,nq
1940	qsurfpal(ig,iq)=qsurf(ig,iq)+qsurfyear(ig,iq)
1941	IF (qsurfyear(ig,iq).gt.0.) THEN
1942	qsurfpal(ig,iq)=qsurfpal(ig,iq)- &
1943	qsurfyear(ig,iq)*masslost(iq)/massacc(iq)
1944	ENDIF
1945	ENDDO
1946	ENDDO
1947	! Finally ensure conservation of qsurf
1948	DO iq=1,nq
1949	call globalaverage2d(ngrid,qsurf(:,iq),globaveice(iq))
1950	call globalaverage2d(ngrid,qsurfpal(:,iq), &
1951	globavenewice(iq))
1952	IF (globavenewice(iq).gt.0.) THEN
1953	qsurfpal(:,iq)=qsurfpal(:,iq)* &
1954	globaveice(iq)/globavenewice(iq)
1955	ENDIF
1956	ENDDO
1957
1958	! update new geopotential depending on the ice reservoir
1959	phisfipal(:)=phisfinew(:)+qsurfpal(:,igcm_n2)*g/1000.
1960	!phisfipal(ig)=phisfi(ig)
1961
1962
1963	if (kbo.or.triton) then ! case of Triton : we do not change the orbital parameters
1964
1965	pdaypal=pday ! no increment of pdaypal to keep same evolution of the subsolar point
1966	eccpal=1.-periastr/((periastr+apoastr)/2.) !no change of ecc
1967	peri_daypal=peri_day ! no change
1968	oblipal=obliquit ! no change
1969	tpalnew=tpal
1970	adjustnew=adjust
1971
1972	else ! Pluto
1973	! update new pday and tpal (Myr) to be set in startfi controle
1974	pdaypal=int(day_ini+paleoyears*365.25/6.3872)
1975	tpalnew=tpal+paleoyears*1.e-6 ! Myrs
1976
1977	! update new N2 ice adjustment (not tested yet on Pluto)
1978	adjustnew=adjust
1979
1980	! update milankovitch parameters : obliquity,Lsp,ecc
1981	call calcmilank(tpalnew,oblipal,peri_daypal,eccpal)
1982	!peri_daypal=peri_day
1983	!eccpal=0.009
1984
1985	endif
1986
1987	if (is_master) write(,) "Paleo peri=",peri_daypal," tpal=",tpalnew
1988	if (is_master) write(,) "Paleo eccpal=",eccpal," tpal=",tpalnew
1989
1990
1991	#ifndef MESOSCALE
1992	! create restartfi
1993	if (ngrid.ne.1) then
1994	!TODO: import this routine from pluto.old
1995	! call physdem1pal("restartfi.nc",long,lati,nsoilmx,nq, &
1996	! ptimestep,pdaypal, &
1997	! ztime_fin,tsurf,tsoil,emis,q2,qsurfpal, &
1998	! cell_area,albedodat,tidat,zmea,zstd,zsig, &
1999	! zgam,zthe,oblipal,eccpal,tpalnew,adjustnew,phisfipal, &
2000	! peri_daypal)
2001	endif
2002	else ! 'paleo'
2003
2004	if (ngrid.ne.1) then
2005	write(,)'PHYSIQ: for physdem ztime_fin =',ztime_fin
2006
2007	call physdem1("restartfi.nc",nsoilmx,ngrid,nlayer,nq, &
2008	ptimestep,ztime_fin, &
2009	tsurf,tsoil,emis,q2,qsurf_hist)
2010	endif
2011	#endif
2012	endif ! end of 'paleo'
2013	! if(ok_slab_ocean) then
2014	! call ocean_slab_final!(tslab, seaice)
2015	! end if
2016
2017	endif ! end of 'lastcall'
2018
2019
2020	! -----------------------------------------------------------------
2021	! WSTATS: Saving statistics
2022	! -----------------------------------------------------------------
2023	! ("stats" stores and accumulates key variables in file "stats.nc"
2024	! which can later be used to make the statistic files of the run:
2025	! if flag "callstats" from callphys.def is .true.)
2026
2027
2028	call wstats(ngrid,"ps","Surface pressure","Pa",2,ps)
2029	call wstats(ngrid,"tsurf","Surface temperature","K",2,tsurf)
2030	call wstats(ngrid,"fluxsurf_lw", &
2031	"Thermal IR radiative flux to surface","W.m-2",2, &
2032	fluxsurf_lw)
2033	call wstats(ngrid,"fluxtop_lw", &
2034	"Thermal IR radiative flux to space","W.m-2",2, &
2035	fluxtop_lw)
2036
2037	! call wstats(ngrid,"fluxsurf_sw", &
2038	! "Solar radiative flux to surface","W.m-2",2, &
2039	! fluxsurf_sw_tot)
2040	! call wstats(ngrid,"fluxtop_sw", &
2041	! "Solar radiative flux to space","W.m-2",2, &
2042	! fluxtop_sw_tot)
2043
2044
2045	call wstats(ngrid,"ISR","incoming stellar rad.","W m-2",2,fluxtop_dn)
2046	call wstats(ngrid,"ASR","absorbed stellar rad.","W m-2",2,fluxabs_sw)
2047	call wstats(ngrid,"OLR","outgoing longwave rad.","W m-2",2,fluxtop_lw)
2048	!call wstats(ngrid,"ALB","Surface albedo"," ",2,albedo_equivalent)
2049	!call wstats(ngrid,"ALB_1st","First Band Surface albedo"," ",2,albedo(:,1))
2050	call wstats(ngrid,"p","Pressure","Pa",3,pplay)
2051	call wstats(ngrid,"temp","Atmospheric temperature","K",3,zt)
2052	call wstats(ngrid,"u","Zonal (East-West) wind","m.s-1",3,zu)
2053	call wstats(ngrid,"v","Meridional (North-South) wind","m.s-1",3,zv)
2054	call wstats(ngrid,"w","Vertical (down-up) wind","m.s-1",3,pw)
2055	call wstats(ngrid,"q2","Boundary layer eddy kinetic energy","m2.s-2",3,q2)
2056
2057	if (tracer) then
2058	do iq=1,nq
2059	call wstats(ngrid,noms(iq),noms(iq),'kg/kg',3,zq(1,1,iq))
2060	call wstats(ngrid,trim(noms(iq))//'_surf',trim(noms(iq))//'_surf', &
2061	'kg m^-2',2,qsurf(1,iq) )
2062	call wstats(ngrid,trim(noms(iq))//'_col',trim(noms(iq))//'_col', &
2063	'kg m^-2',2,qcol(1,iq) )
2064
2065	! call wstats(ngrid,trim(noms(iq))//'_reff', &
2066	! trim(noms(iq))//'_reff', &
2067	! 'm',3,reffrad(1,1,iq))
2068
2069	end do
2070
2071	endif ! end of 'tracer'
2072
2073	!AF24: deleted slab ocean and water
2074
2075	if(lastcall.and.callstats) then
2076	write (,) "Writing stats..."
2077	call mkstats(ierr)
2078	endif
2079
2080
2081	#ifndef MESOSCALE
2082
2083	!-----------------------------------------------------------------------------------------------------
2084	! OUTPUT in netcdf file "DIAGFI.NC", containing any variable for diagnostic
2085	!
2086	! Note 1 : output with period "ecritphy", set in "run.def"
2087	!
2088	! Note 2 : writediagfi can also be called from any other subroutine for any variable,
2089	! but its preferable to keep all the calls in one place ...
2090	!-----------------------------------------------------------------------------------------------------
2091
2092	call writediagfi(ngrid,"Ls","solar longitude","deg",0,zls*180./pi)
2093	call writediagfi(ngrid,"Lss","sub solar longitude","deg",0,zlss*180./pi)
2094	call writediagfi(ngrid,"RA","right ascension","deg",0,right_ascen*180./pi)
2095	call writediagfi(ngrid,"Declin","solar declination","deg",0,declin*180./pi)
2096	call writediagfi(ngrid,"tsurf","Surface temperature","K",2,tsurf)
2097	call writediagfi(ngrid,"ps","Surface pressure","Pa",2,ps)
2098
2099	!! Pluto outputs
2100	! call writediagfi(ngrid,"rice_ch4","ch4 ice mass mean radius","m",3,rice_ch4)
2101	call writediagfi(ngrid,"dist_star","dist_star","AU",0,dist_star)
2102
2103	if (fast) then
2104	call writediagfi(ngrid,"globave","surf press","Pa",0,globave)
2105	!AF: TODO which outputs?
2106	else
2107	if (check_physics_outputs) then
2108	! Check the validity of updated fields at the end of the physics step
2109	call check_physics_fields("HERE physiq:", zt, zu, zv, pplev, zq)
2110	endif
2111
2112	call writediagfi(ngrid,"temp","temperature","K",3,zt)
2113	call writediagfi(ngrid,"teta","potential temperature","K",3,zh)
2114	call writediagfi(ngrid,"u","Zonal wind","m.s-1",3,zu)
2115	call writediagfi(ngrid,"v","Meridional wind","m.s-1",3,zv)
2116	call writediagfi(ngrid,"w","Vertical wind","m.s-1",3,pw)
2117	call writediagfi(ngrid,"p","Pressure","Pa",3,pplay)
2118	endif
2119
2120	! Subsurface temperatures
2121	! call writediagsoil(ngrid,"tsurf","Surface temperature","K",2,tsurf)
2122	! call writediagsoil(ngrid,"temp","temperature","K",3,tsoil)
2123
2124	! ! Oceanic layers !AF24: removed
2125
2126	! ! Thermal plume model !AF24: removed
2127
2128	! GW non-oro outputs !AF24: removed
2129
2130	! Total energy balance diagnostics
2131	if(callrad)then
2132
2133	call writediagfi(ngrid,"ALB","Surface albedo"," ",2,albedo_equivalent)
2134	!call writediagfi(ngrid,"ALB_1st","First Band Surface albedo"," ",2,albedo(:,1))
2135	call writediagfi(ngrid,"ISR","incoming stellar rad.","W m-2",2,fluxtop_dn)
2136	call writediagfi(ngrid,"ASR","absorbed stellar rad.","W m-2",2,fluxabs_sw)
2137	call writediagfi(ngrid,"OLR","outgoing longwave rad.","W m-2",2,fluxtop_lw)
2138	call writediagfi(ngrid,"shad","rings"," ", 2, fract)
2139
2140	! call writediagfi(ngrid,"ASRcs","absorbed stellar rad (cs).","W m-2",2,fluxabs_sw1)
2141	! call writediagfi(ngrid,"OLRcs","outgoing longwave rad (cs).","W m-2",2,fluxtop_lw1)
2142	! call writediagfi(ngrid,"fluxsurfsw","sw surface flux.","W m-2",2,fluxsurf_sw)
2143	! call writediagfi(ngrid,"fluxsurflw","lw back radiation.","W m-2",2,fluxsurf_lw)
2144	! call writediagfi(ngrid,"fluxsurfswcs","sw surface flux (cs).","W m-2",2,fluxsurf_sw1)
2145	! call writediagfi(ngrid,"fluxsurflwcs","lw back radiation (cs).","W m-2",2,fluxsurf_lw1)
2146
2147	! if(ok_slab_ocean) then
2148	! call writediagfi(ngrid,"GND","heat flux from ground","W m-2",2,fluxgrdocean)
2149	! else
2150	call writediagfi(ngrid,"GND","heat flux from ground","W m-2",2,fluxgrd)
2151	! endif
2152
2153	call writediagfi(ngrid,"DYN","dynamical heat input","W m-2",2,fluxdyn)
2154
2155	endif ! end of 'callrad'
2156
2157	if(enertest) then
2158
2159	if (calldifv) then
2160
2161	call writediagfi(ngrid,"q2","turbulent kinetic energy","J.kg^-1",3,q2)
2162	call writediagfi(ngrid,"sensibFlux","sensible heat flux","w.m^-2",2,sensibFlux)
2163
2164	! call writediagfi(ngrid,"dEzdiff","turbulent diffusion heating (-sensible flux)","w.m^-2",3,dEzdiff)
2165	! call writediagfi(ngrid,"dEdiff","integrated turbulent diffusion heating (-sensible flux)","w.m^-2",2,dEdiff)
2166	! call writediagfi(ngrid,"dEdiffs","In TurbDiff (correc rad+latent heat) surf nrj change","w.m^-2",2,dEdiffs)
2167
2168	endif
2169
2170	if (corrk) then
2171	call writediagfi(ngrid,"dEzradsw","radiative heating","w.m^-2",3,dEzradsw)
2172	call writediagfi(ngrid,"dEzradlw","radiative heating","w.m^-2",3,dEzradlw)
2173	endif
2174
2175	! if(watercond) then !AF24: removed
2176
2177	if (generic_condensation) then
2178
2179	call writediagfi(ngrid,"genericconddE","heat from generic condensation","W m-2",2,genericconddE)
2180	call writediagfi(ngrid,"dt_generic_condensation","heating from generic condensation","K s-1",3,dt_generic_condensation)
2181
2182	endif
2183
2184	endif ! end of 'enertest'
2185
2186	! Diagnostics of optical thickness
2187	! Warning this is exp(-tau), I let you postproc with -log to have tau itself - JVO 19
2188	if (diagdtau) then
2189	do nw=1,L_NSPECTV
2190	write(str2,'(i2.2)') nw
2191	call writediagfi(ngrid,'dtauv'//str2,'Layer optical thickness attenuation in VI band '//str2,'',1,int_dtauv(:,nlayer:1:-1,nw))
2192	enddo
2193	do nw=1,L_NSPECTI
2194	write(str2,'(i2.2)') nw
2195	call writediagfi(ngrid,'dtaui'//str2,'Layer optical thickness attenuation in IR band '//str2,'',1,int_dtaui(:,nlayer:1:-1,nw))
2196	enddo
2197	endif
2198
2199
2200	! Temporary inclusions for heating diagnostics.
2201	call writediagfi(ngrid,"zdtsw","SW heating","T s-1",3,zdtsw)
2202	call writediagfi(ngrid,"zdtlw","LW heating","T s-1",3,zdtlw)
2203	call writediagfi(ngrid,"dtrad","radiative heating","K s-1",3,dtrad)
2204	call writediagfi(ngrid,"zdtdyn","Dyn. heating","T s-1",3,zdtdyn)
2205
2206	!Pluto specific
2207	call writediagfi(ngrid,"zdtc","tendancy T cond N2","K",3,zdtc)
2208	! call writediagfi(ngrid,"zdtch4cloud","tendancy T ch4cloud","K",3,zdtch4cloud)
2209	! call writediagfi(ngrid,"zdtcocloud","tendancy T cocloud","K",3,zdtcocloud)
2210	! call writediagfi(ngrid,"zq1temp_ch4"," "," ",2,zq1temp_ch4)
2211	! call writediagfi(ngrid,"qsat_ch4"," "," ",2,qsat_ch4)
2212	! call writediagfi(ngrid,"qsat_ch4_l1"," "," ",2,qsat_ch4_l1)
2213	! call writediagfi(ngrid,"senshf1","senshf1"," ",2,sensiblehf1)
2214	! call writediagfi(ngrid,"senshf2","senshf2"," ",2,sensiblehf2)
2215
2216
2217	! For Debugging.
2218	!call writediagfi(ngrid,'rnat','Terrain type',' ',2,real(rnat))
2219	!call writediagfi(ngrid,'pphi','Geopotential',' ',3,pphi)
2220
2221
2222	! Output aerosols.!AF: TODO: write haze aerosols
2223	! if (igcm_n2_ice.ne.0.and.iaero_haze.ne.0) &
2224	! call writediagfi(ngrid,'N2ice_reff','N2ice_reff','m',3,reffrad(1,1,iaero_haze))
2225	! if (igcm_n2_ice.ne.0.and.iaero_haze.ne.0) &
2226	! call writediagfi(ngrid,'N2ice_reffcol','N2ice_reffcol','um kg m^-2',2,reffcol(1,iaero_haze))
2227	! if (igcm_h2o_ice.ne.0.and.iaero_h2o.ne.0) & !AF24: removed
2228
2229	! Output tracers.
2230	if (tracer) then
2231
2232	do iq=1,nq
2233	call writediagfi(ngrid,noms(iq),noms(iq),'kg/kg',3,zq(1,1,iq))
2234	call writediagfi(ngrid,trim(noms(iq))//'_surf',trim(noms(iq))//'_surf', &
2235	'kg m^-2',2,qsurf_hist(1,iq) )
2236	call writediagfi(ngrid,trim(noms(iq))//'_col',trim(noms(iq))//'_col', &
2237	'kg m^-2',2,qcol(1,iq) )
2238	! call writediagfi(ngrid,trim(noms(iq))//'_surf',trim(noms(iq))//'_surf', &
2239	! 'kg m^-2',2,qsurf(1,iq) )
2240
2241	! if(watercond.or.CLFvarying)then !AF24: removed
2242
2243	if(generic_condensation)then
2244	call writediagfi(ngrid,"rneb_generic","GCS cloud fraction (generic condensation)"," ",3,rneb_generic)
2245	call writediagfi(ngrid,"CLF","GCS cloud fraction"," ",3,cloudfrac)
2246	call writediagfi(ngrid,"RH_generic","GCS relative humidity"," ",3,RH_generic)
2247	endif
2248
2249	! if(generic_rain)then !AF24: removed
2250	! if((hydrology).and.(.not.ok_slab_ocean))then !AF24: removed
2251
2252	call writediagfi(ngrid,"tau_col","Total aerosol optical depth","[]",2,tau_col)
2253
2254	enddo ! end of 'nq' loop
2255
2256	!Pluto specific
2257	call writediagfi(ngrid,'n2_iceflux','n2_iceflux',"kg m^-2 s^-1",2,flusurf(1,igcm_n2) )
2258	! call writediagfi(ngrid,'haze_reff','haze_reff','m',3,reffrad(1,1,1))
2259	if (methane) then
2260	call writediagfi(ngrid,'ch4_iceflux','ch4_iceflux',&
2261	"kg m^-2 s^-1",2,flusurf(1,igcm_ch4_ice) )
2262	call writediagfi(ngrid,"vmr_ch4","vmr_ch4","%",2,vmr_ch4)
2263	if (.not.fast) then
2264	call writediagfi(ngrid,"zrho_ch4","zrho_ch4","kg.m-3",3,zrho_ch4(:,:))
2265	endif
2266
2267	! Tendancies
2268	call writediagfi(ngrid,"zdqch4cloud","ch4 cloud","T s-1",&
2269	3,zdqch4cloud(1,1,igcm_ch4_gas))
2270	call writediagfi(ngrid,"zdqcn2_ch4","zdq condn2 ch4","",&
2271	3,zdqc(:,:,igcm_ch4_gas))
2272	call writediagfi(ngrid,"zdqdif_ch4","zdqdif ch4","",&
2273	3,zdqdif(:,:,igcm_ch4_gas))
2274	call writediagfi(ngrid,"zdqsdif_ch4_ice","zdqsdif ch4","",&
2275	2,zdqsdif(:,igcm_ch4_ice))
2276	call writediagfi(ngrid,"zdqadj_ch4","zdqadj ch4","",&
2277	3,zdqadj(:,:,igcm_ch4_gas))
2278	if (sedimentation) then
2279	call writediagfi(ngrid,"zdqsed_ch4","zdqsed ch4","",&
2280	3,zdqsed(:,:,igcm_ch4_gas))
2281	call writediagfi(ngrid,"zdqssed_ch4","zdqssed ch4","",&
2282	2,zdqssed(:,igcm_ch4_gas))
2283	endif
2284	if (metcloud) then
2285	call writediagfi(ngrid,"zdtch4cloud","ch4 cloud","T s-1",&
2286	3,zdtch4cloud)
2287	endif
2288
2289	endif
2290
2291	if (carbox) then
2292	call writediagfi(ngrid,'co_iceflux','co_iceflux',&
2293	"kg m^-2 s^-1",2,flusurf(1,igcm_co_ice) )
2294	call writediagfi(ngrid,"vmr_co","vmr_co","%",2,vmr_co)
2295	if (.not.fast) THEN
2296	call writediagfi(ngrid,"zrho_co","zrho_co","kg.m-3",3,zrho_co(:,:))
2297	endif
2298	endif
2299
2300	if (haze) then
2301	! call writediagfi(ngrid,"zrho_haze","zrho_haze","kg.m-3",3,zrho_haze(:,:))
2302	call writediagfi(ngrid,"zdqrho_photprec","zdqrho_photprec",&
2303	"kg.m-3.s-1",3,zdqrho_photprec(:,:))
2304	call writediagfi(ngrid,"zdqphot_prec","zdqphot_prec","",&
2305	3,zdqphot_prec(:,:))
2306	call writediagfi(ngrid,"zdqhaze_ch4","zdqhaze_ch4","",&
2307	3,zdqhaze(:,:,igcm_ch4_gas))
2308	call writediagfi(ngrid,"zdqhaze_prec","zdqhaze_prec","",&
2309	3,zdqhaze(:,:,igcm_prec_haze))
2310	if (igcm_haze.ne.0) then
2311	call writediagfi(ngrid,"zdqhaze_haze","zdqhaze_haze","",&
2312	3,zdqhaze(:,:,igcm_haze))
2313	if (sedimentation) then
2314	call writediagfi(ngrid,"zdqssed_haze","zdqssed haze",&
2315	"kg/m2/s",2,zdqssed(:,igcm_haze))
2316	endif
2317	endif
2318	call writediagfi(ngrid,"zdqphot_ch4","zdqphot_ch4","",&
2319	3,zdqphot_ch4(:,:))
2320	call writediagfi(ngrid,"zdqconv_prec","zdqconv_prec","",&
2321	3,zdqconv_prec(:,:))
2322	! call writediagfi(ngrid,"zdqhaze_col","zdqhaze col","kg/m2/s",
2323	! & 2,zdqhaze_col(:))
2324	endif
2325
2326	if (aerohaze) then
2327	call writediagfi(ngrid,"tau_col",&
2328	"Total aerosol optical depth","opacity",2,tau_col)
2329	endif
2330
2331	endif ! end of 'tracer'
2332
2333
2334	! Output spectrum.
2335	if(specOLR.and.corrk)then
2336	call writediagspecIR(ngrid,"OLR3D","OLR(lon,lat,band)","W/m^2/cm^-1",3,OLR_nu)
2337	call writediagspecVI(ngrid,"OSR3D","OSR(lon,lat,band)","W/m^2/cm^-1",3,OSR_nu)
2338	call writediagspecVI(ngrid,"GSR3D","GSR(lon,lat,band)","W/m^2/cm^-1",3,GSR_nu)
2339	endif
2340
2341	#else
2342	comm_HR_SW(1:ngrid,1:nlayer) = zdtsw(1:ngrid,1:nlayer)
2343	comm_HR_LW(1:ngrid,1:nlayer) = zdtlw(1:ngrid,1:nlayer)
2344	comm_ALBEQ(1:ngrid)=albedo_equivalent(1:ngrid)
2345	if (.not.calldifv) comm_LATENT_HF(:)=0.0
2346	! if ((tracer).and.(water)) then !AF24: removed
2347
2348	if ((tracer).and.(generic_condensation)) then
2349	! .and.(.not. water)
2350
2351	! If you have set generic_condensation (and not water) and you have set several GCS
2352	! then the outputs given to WRF will be only the ones for the last generic tracer
2353	! (Because it is rewritten every tracer in the loop)
2354	! WRF can take only one moist tracer
2355
2356	do iq=1,nq
2357	call generic_tracer_index(nq,iq,igcm_generic_vap,igcm_generic_ice,call_ice_vap_generic)
2358
2359	if (call_ice_vap_generic) then ! to call only one time the ice/vap pair of a tracer
2360
2361	reffrad_generic_zeros_for_wrf(:,:) = 1.
2362
2363	comm_CLOUDFRAC(1:ngrid,1:nlayer) = cloudfrac(1:ngrid,1:nlayer)
2364	comm_TOTCLOUDFRAC(1:ngrid) = totcloudfrac(1:ngrid) !??????
2365	comm_SURFRAIN(1:ngrid) = zdqsrain_generic(1:ngrid,iq)
2366	comm_DQVAP(1:ngrid,1:nlayer) = pdq(1:ngrid,1:nlayer,igcm_generic_vap)
2367	comm_DQICE(1:ngrid,1:nlayer)=pdq(1:ngrid,1:nlayer,igcm_generic_ice)
2368	! comm_H2OICE_REFF(1:ngrid,1:nlayer) = reffrad_generic_zeros_for_wrf(1:ngrid,1:nlayer) ! for now zeros !
2369	!comm_H2OICE_REFF(1:ngrid,1:nlayer) = 0*zdtrain_generic(1:ngrid,1:nlayer) ! for now zeros !
2370	comm_REEVAP(1:ngrid) = reevap_precip_generic(1:ngrid,iq)
2371	comm_DTRAIN(1:ngrid,1:nlayer) = zdtrain_generic(1:ngrid,1:nlayer)
2372	comm_DTLSC(1:ngrid,1:nlayer) = dt_generic_condensation(1:ngrid,1:nlayer)
2373	comm_RH(1:ngrid,1:nlayer) = RH_generic(1:ngrid,1:nlayer,iq)
2374
2375	endif
2376	end do ! do iq=1,nq loop on tracers
2377
2378	else
2379	comm_CLOUDFRAC(1:ngrid,1:nlayer)=0.
2380	comm_TOTCLOUDFRAC(1:ngrid)=0.
2381	comm_SURFRAIN(1:ngrid)=0.
2382	comm_DQVAP(1:ngrid,1:nlayer)=0.
2383	comm_DQICE(1:ngrid,1:nlayer)=0.
2384	! comm_H2OICE_REFF(1:ngrid,1:nlayer)=0.
2385	comm_REEVAP(1:ngrid)=0.
2386	comm_DTRAIN(1:ngrid,1:nlayer)=0.
2387	comm_DTLSC(1:ngrid,1:nlayer)=0.
2388	comm_RH(1:ngrid,1:nlayer)=0.
2389
2390	endif ! if water, if generic_condensation, else
2391
2392	comm_FLUXTOP_DN(1:ngrid)=fluxtop_dn(1:ngrid)
2393	comm_FLUXABS_SW(1:ngrid)=fluxabs_sw(1:ngrid)
2394	comm_FLUXTOP_LW(1:ngrid)=fluxtop_lw(1:ngrid)
2395	comm_FLUXSURF_SW(1:ngrid)=fluxsurf_sw(1:ngrid)
2396	comm_FLUXSURF_LW(1:ngrid)=fluxsurf_lw(1:ngrid)
2397	comm_FLXGRD(1:ngrid)=fluxgrd(1:ngrid)
2398	sensibFlux(1:ngrid) = zflubid(1:ngrid) - capcal(1:ngrid)*zdtsdif(1:ngrid) !!! ????
2399	comm_HR_DYN(1:ngrid,1:nlayer) = zdtdyn(1:ngrid,1:nlayer)
2400
2401	! if (turb_resolved) then
2402	! open(17,file='lsf.txt',form='formatted',status='old')
2403	! rewind(17)
2404	! DO l=1,nlayer
2405	! read(17,*) lsf_dt(l),lsf_dq(l)
2406	! ENDDO
2407	! close(17)
2408	! do ig=1,ngrid
2409	! if ((tracer).and.(water)) then
2410	! pdq(ig,:,igcm_h2o_vap) = pdq(ig,:,igcm_h2o_vap) + lsf_dq(:)
2411	! endif
2412	! pdt(ig,:) = pdt(ig,:) + lsf_dt(:)
2413	! comm_HR_DYN(ig,:) = lsf_dt(:)
2414	! enddo
2415	! endif
2416	#endif
2417
2418	! XIOS outputs
2419	#ifdef CPP_XIOS
2420	! Send fields to XIOS: (NB these fields must also be defined as
2421	! <field id="..." /> in context_lmdz_physics.xml to be correctly used)
2422	CALL send_xios_field("ls",zls)
2423
2424	CALL send_xios_field("ps",ps)
2425	CALL send_xios_field("area",cell_area)
2426	CALL send_xios_field("p",pplay)
2427	CALL send_xios_field("temperature",zt)
2428	CALL send_xios_field("u",zu)
2429	CALL send_xios_field("v",zv)
2430	CALL send_xios_field("omega",omega)
2431
2432	! IF (calltherm) THEN !AF24: removed
2433	! IF (water) THEN !AF24: removed
2434
2435	CALL send_xios_field("ISR",fluxtop_dn)
2436	CALL send_xios_field("OLR",fluxtop_lw)
2437	CALL send_xios_field("ASR",fluxabs_sw)
2438
2439	if (specOLR .and. corrk) then
2440	call send_xios_field("OLR3D",OLR_nu)
2441	call send_xios_field("IR_Bandwidth",DWNI)
2442	call send_xios_field("VI_Bandwidth",DWNV)
2443	call send_xios_field("OSR3D",OSR_nu)
2444	call send_xios_field("GSR3D",GSR_nu)
2445	endif
2446
2447	if (lastcall.and.is_omp_master) then
2448	write(,) "physiq: call xios_context_finalize"
2449	call xios_context_finalize
2450	endif
2451	#endif
2452
2453	if (check_physics_outputs) then
2454	! Check the validity of updated fields at the end of the physics step
2455	call check_physics_fields("end of physiq:", zt, zu, zv, pplev, zq)
2456	endif
2457
2458	icount=icount+1
2459
2460	end subroutine physiq
2461
2462	end module physiq_mod

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