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physiq_mod.F90 @ 3232

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Pluto PCM: 1D functional AF
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1	module physiq_mod
2
3	implicit none
4
5	contains
6
7	subroutine physiq(ngrid,nlayer,nq, &
8	firstcall,lastcall, &
9	pday,ptime,ptimestep, &
10	pplev,pplay,pphi, &
11	pu,pv,pt,pq, &
12	flxw, &
13	pdu,pdv,pdt,pdq,pdpsrf)
14
15	!!
16	use write_field_phy, only: Writefield_phy
17	!!
18	use ioipsl_getin_p_mod, only: getin_p
19	use radinc_h, only : L_NSPECTI,L_NSPECTV,naerkind, corrkdir, banddir
20	use generic_cloud_common_h, only : epsi_generic, Psat_generic
21	use gases_h, only: gnom, gfrac
22	use radcommon_h, only: sigma, glat, grav, BWNV, WNOI, DWNI, DWNV, WNOV
23	use suaer_corrk_mod, only: suaer_corrk
24	use radii_mod, only: su_aer_radii,haze_reffrad_fix
25	use aerosol_mod, only: iaero_haze, i_haze, haze_prof
26	use surfdat_h, only: phisfi, zmea, zstd, zsig, zgam, zthe, &
27	dryness
28	use comdiurn_h, only: coslat, sinlat, coslon, sinlon
29	use comsaison_h, only: mu0, fract, dist_star, declin, right_ascen
30	use comsoil_h, only: nsoilmx, layer, mlayer, inertiedat
31	use geometry_mod, only: latitude, longitude, cell_area
32	USE comgeomfi_h, only: totarea, totarea_planet
33	USE tracer_h, only: noms, mmol, radius, rho_q, qext, &
34	igcm_n2,&
35	alpha_lift, alpha_devil, qextrhor, &
36	nesp, is_chim, is_condensable,constants_epsi_generic
37	use time_phylmdz_mod, only: ecritphy, iphysiq, nday
38	use phyetat0_mod, only: phyetat0
39	use wstats_mod, only: callstats, wstats, mkstats
40	use phyredem, only: physdem0, physdem1
41	use planetwide_mod, only: planetwide_minval,planetwide_maxval,planetwide_sumval
42	use mod_phys_lmdz_para, only : is_master
43	use planete_mod, only: apoastr, periastr, year_day, peri_day, &
44	obliquit, nres, z0
45	use comcstfi_mod, only: pi, g, rcp, r, rad, mugaz, cpp
46	use time_phylmdz_mod, only: daysec
47	use callkeys_mod, only: fast,albedo_spectral_mode, calladj, calldifv, &
48	callrad, callsoil, nosurf, &
49	aerohaze, corrk, diagdtau,&
50	diurnal, enertest, fat1au, &
51	icetstep, intheat, iradia, kastprof, &
52	lwrite, mass_redistrib, meanOLR, &
53	n2cond,nearn2cond, noseason_day, &
54	season, sedimentation,generic_condensation, &
55	aerohaze, haze_proffix, &
56	specOLR, &
57	startphy_file, testradtimes, &
58	tracer, UseTurbDiff, &
59	global1d, szangle
60	use generic_tracer_index_mod, only: generic_tracer_index
61	use check_fields_mod, only: check_physics_fields
62	use conc_mod, only: rnew, cpnew, ini_conc_mod
63	use phys_state_var_mod
64	use callcorrk_mod, only: callcorrk
65	use vdifc_mod, only: vdifc
66	use turbdiff_mod, only: turbdiff
67	use turb_mod, only : q2,sensibFlux,turb_resolved
68	use mass_redistribution_mod, only: mass_redistribution
69	use condensation_generic_mod, only: condensation_generic
70	use datafile_mod, only: datadir
71	#ifndef MESOSCALE
72	use vertical_layers_mod, only: presnivs, pseudoalt
73	use mod_phys_lmdz_omp_data, ONLY: is_omp_master
74	#else
75	use comm_wrf, only : comm_HR_SW, comm_HR_LW, &
76	comm_CLOUDFRAC,comm_TOTCLOUDFRAC, comm_RH, &
77	comm_HR_DYN, &
78	comm_DQICE,comm_DQVAP,comm_ALBEQ, &
79	comm_FLUXTOP_DN,comm_FLUXABS_SW, &
80	comm_FLUXTOP_LW,comm_FLUXSURF_SW, &
81	comm_FLUXSURF_LW,comm_FLXGRD, &
82	comm_DTRAIN,comm_DTLSC, &
83	comm_LATENT_HF
84
85	#endif
86
87	#ifdef CPP_XIOS
88	use xios_output_mod, only: initialize_xios_output, &
89	update_xios_timestep, &
90	send_xios_field
91	use wxios, only: wxios_context_init, xios_context_finalize
92	#endif
93
94	implicit none
95
96
97	!==================================================================
98	!
99	! Purpose
100	! -------
101	! Central subroutine for all the physics parameterisations in the
102	! universal model. Originally adapted from the Mars LMDZ model.
103	!
104	! The model can be run without or with tracer transport
105	! depending on the value of "tracer" in file "callphys.def".
106	!
107	!
108	! It includes:
109	!
110	! I. Initialization :
111	! I.1 Firstcall initializations.
112	! I.2 Initialization for every call to physiq.
113	!
114	! II. Compute radiative transfer tendencies (longwave and shortwave) :
115	! II.a Option 1 : Call correlated-k radiative transfer scheme.
116	! II.b Option 2 : Call Newtonian cooling scheme.
117	! II.c Option 3 : Atmosphere has no radiative effect.
118	!
119	! III. Vertical diffusion (turbulent mixing) :
120	!
121	! IV. Convection :
122	! IV.a Thermal plume model
123	! IV.b Dry convective adjusment
124	!
125	! V. Condensation and sublimation of gases (currently just N2).
126	!
127	! VI. Tracers
128	! VI.1. Water and water ice.
129	! VI.2 Photochemistry
130	! VI.3. Aerosols and particles.
131	! VI.4. Updates (pressure variations, surface budget).
132	! VI.5. Slab Ocean.
133	! VI.6. Surface Tracer Update.
134	!
135	! VII. Surface and sub-surface soil temperature.
136	!
137	! VIII. Perform diagnostics and write output files.
138	!
139	!
140	! arguments
141	! ---------
142	!
143	! INPUT
144	! -----
145	!
146	! ngrid Size of the horizontal grid.
147	! nlayer Number of vertical layers.
148	! nq Number of advected fields.
149	!
150	! firstcall True at the first call.
151	! lastcall True at the last call.
152	!
153	! pday Number of days counted from the North. Spring equinoxe.
154	! ptime Universal time (0<ptime<1): ptime=0.5 at 12:00 UT.
155	! ptimestep timestep (s).
156	!
157	! pplay(ngrid,nlayer) Pressure at the middle of the layers (Pa).
158	! pplev(ngrid,nlayer+1) Intermediate pressure levels (Pa).
159	! pphi(ngrid,nlayer) Geopotential at the middle of the layers (m2.s-2).
160	!
161	! pu(ngrid,nlayer) u, zonal component of the wind (ms-1).
162	! pv(ngrid,nlayer) v, meridional component of the wind (ms-1).
163	!
164	! pt(ngrid,nlayer) Temperature (K).
165	!
166	! pq(ngrid,nlayer,nq) Advected fields.
167	!
168	! pudyn(ngrid,nlayer) \
169	! pvdyn(ngrid,nlayer) \ Dynamical temporal derivative for the
170	! ptdyn(ngrid,nlayer) / corresponding variables.
171	! pqdyn(ngrid,nlayer,nq) /
172	! flxw(ngrid,nlayer) vertical mass flux (kg/s) at layer lower boundary
173	!
174	! OUTPUT
175	! ------
176	!
177	! pdu(ngrid,nlayer) \
178	! pdv(ngrid,nlayer) \ Temporal derivative of the corresponding
179	! pdt(ngrid,nlayer) / variables due to physical processes.
180	! pdq(ngrid,nlayer) /
181	! pdpsrf(ngrid) /
182	!
183	!
184	! Authors
185	! -------
186	! Frederic Hourdin 15/10/93
187	! Francois Forget 1994
188	! Christophe Hourdin 02/1997
189	! Subroutine completely rewritten by F. Forget (01/2000)
190	! Water ice clouds: Franck Montmessin (update 06/2003)
191	! Radiatively active tracers: J.-B. Madeleine (10/2008-06/2009)
192	! New correlated-k radiative scheme: R. Wordsworth (2009)
193	! Many specifically Martian subroutines removed: R. Wordsworth (2009)
194	! Improved water cycle: R. Wordsworth / B. Charnay (2010)
195	! To F90: R. Wordsworth (2010)
196	! New turbulent diffusion scheme: J. Leconte (2012)
197	! Loops converted to F90 matrix format: J. Leconte (2012)
198	! No more ngrid/nq, F90 commons and adaptation to parallel: A. Spiga (2012)
199	! Purge of the code : M. Turbet (2015)
200	! Photochemical core developped by F. Lefevre: B. Charnay (2017)
201	! Purge for Pluto model : A. Falco (2024)
202	!==================================================================
203
204
205	! 0. Declarations :
206	! ------------------
207
208	include "netcdf.inc"
209
210	! Arguments :
211	! -----------
212
213	! INPUTS:
214	! -------
215
216	integer,intent(in) :: ngrid ! Number of atmospheric columns.
217	integer,intent(in) :: nlayer ! Number of atmospheric layers.
218	integer,intent(in) :: nq ! Number of tracers.
219
220	logical,intent(in) :: firstcall ! Signals first call to physics.
221	logical,intent(in) :: lastcall ! Signals last call to physics.
222
223	real,intent(in) :: pday ! Number of elapsed sols since reference Ls=0.
224	real,intent(in) :: ptime ! "Universal time", given as fraction of sol (e.g.: 0.5 for noon).
225	real,intent(in) :: ptimestep ! Physics timestep (s).
226	real,intent(in) :: pplev(ngrid,nlayer+1) ! Inter-layer pressure (Pa).
227	real,intent(in) :: pplay(ngrid,nlayer) ! Mid-layer pressure (Pa).
228	real,intent(in) :: pphi(ngrid,nlayer) ! Geopotential at mid-layer (m2s-2).
229	real,intent(in) :: pu(ngrid,nlayer) ! Zonal wind component (m/s).
230	real,intent(in) :: pv(ngrid,nlayer) ! Meridional wind component (m/s).
231	real,intent(in) :: pt(ngrid,nlayer) ! Temperature (K).
232	real,intent(in) :: pq(ngrid,nlayer,nq) ! Tracers (kg/kg_of_air).
233	real,intent(in) :: flxw(ngrid,nlayer) ! Vertical mass flux (ks/s) at lower boundary of layer
234
235	! OUTPUTS:
236	! --------
237
238	! Physical tendencies :
239
240	real,intent(out) :: pdu(ngrid,nlayer) ! Zonal wind tendencies (m/s/s).
241	real,intent(out) :: pdv(ngrid,nlayer) ! Meridional wind tendencies (m/s/s).
242	real,intent(out) :: pdt(ngrid,nlayer) ! Temperature tendencies (K/s).
243	real,intent(out) :: pdq(ngrid,nlayer,nq) ! Tracer tendencies (kg/kg_of_air/s).
244	real,intent(out) :: pdpsrf(ngrid) ! Surface pressure tendency (Pa/s).
245
246	! Local saved variables:
247	! ----------------------
248	integer,save :: day_ini ! Initial date of the run (sol since Ls=0).
249	integer,save :: icount ! Counter of calls to physiq during the run.
250	!$OMP THREADPRIVATE(day_ini,icount)
251
252	! Local variables :
253	! -----------------
254
255	! Aerosol (dust or ice) extinction optical depth at reference wavelength
256	! for the "naerkind" optically active aerosols:
257
258	real,save,allocatable :: aerosol(:,:,:) ! Aerosols
259	!$OMP THREADPRIVATE(aerosol)
260	real zh(ngrid,nlayer) ! Potential temperature (K).
261	real pw(ngrid,nlayer) ! Vertical velocity (m/s). (NOTE : >0 WHEN DOWNWARDS !!)
262	real omega(ngrid,nlayer) ! omega velocity (Pa/s, >0 when downward)
263
264	integer l,ig,ierr,iq,nw,isoil,iesp, igcm_generic_vap, igcm_generic_ice
265	logical call_ice_vap_generic ! to call only one time the ice/vap pair of a tracer
266
267	real zls ! Solar longitude (radians).
268	real zlss ! Sub solar point longitude (radians).
269	real zday ! Date (time since Ls=0, calculated in sols).
270	real zzlay(ngrid,nlayer) ! Altitude at the middle of the atmospheric layers.
271	real zzlev(ngrid,nlayer+1) ! Altitude at the atmospheric layer boundaries.
272
273	! VARIABLES for the thermal plume model (AF24: deleted)
274
275	! TENDENCIES due to various processes :
276
277	! For Surface Temperature : (K/s)
278	real zdtsurf(ngrid) ! Cumulated tendencies.
279	real zdtsurfmr(ngrid) ! Mass_redistribution routine.
280	real zdtsurfc(ngrid) ! Condense_n2 routine.
281	real zdtsdif(ngrid) ! Turbdiff/vdifc routines.
282	! real zdtsurf_hyd(ngrid) ! Hydrol routine.
283
284	! For Atmospheric Temperatures : (K/s)
285	real dtlscale(ngrid,nlayer) ! Largescale routine.
286	real dt_generic_condensation(ngrid,nlayer) ! condensation_generic routine.
287	real zdtc(ngrid,nlayer) ! Condense_n2 routine.
288	real zdtdif(ngrid,nlayer) ! Turbdiff/vdifc routines.
289	real zdtmr(ngrid,nlayer) ! Mass_redistribution routine.
290	real zdtsw1(ngrid,nlayer), zdtlw1(ngrid,nlayer) ! Callcorrk routine.
291	real zdtchim(ngrid,nlayer) ! Calchim routine.
292
293	! For Surface Tracers : (kg/m2/s)
294	real dqsurf(ngrid,nq) ! Cumulated tendencies.
295	!real zdqsurfc(ngrid) ! Condense_n2 routine.
296	REAL zdqsc(ngrid,nq) ! Condense_n2 routine.
297	real zdqsdif(ngrid,nq) ! Turbdiff/vdifc routines.
298	real zdqssed(ngrid,nq) ! Callsedim routine.
299	real zdqsurfmr(ngrid,nq) ! Mass_redistribution routine.
300
301	! For Tracers : (kg/kg_of_air/s)
302	real zdqc(ngrid,nlayer,nq) ! Condense_n2 routine.
303	real zdqadj(ngrid,nlayer,nq) ! Convadj routine.
304	real zdqdif(ngrid,nlayer,nq) ! Turbdiff/vdifc routines.
305	real zdqevap(ngrid,nlayer) ! Turbdiff routine.
306	real zdqsed(ngrid,nlayer,nq) ! Callsedim routine.
307	real zdqmr(ngrid,nlayer,nq) ! Mass_redistribution routine.
308	real dqvaplscale_generic(ngrid,nlayer,nq) ! condensation_generic routine.
309	real dqcldlscale_generic(ngrid,nlayer,nq) ! condensation_generic routine.
310	REAL,allocatable,save :: zdqchim(:,:,:) ! Calchim_asis routine
311	REAL,allocatable,save :: zdqschim(:,:) ! Calchim_asis routine
312	!$OMP THREADPRIVATE(zdqchim,zdqschim)
313
314
315	!! PLUTO variables
316	REAL zdqch4cloud(ngrid,nlayer,nq)
317	REAL zdqsch4cloud(ngrid,nq)
318	REAL zdtch4cloud(ngrid,nlayer)
319	REAL zdqcocloud(ngrid,nlayer,nq)
320	REAL zdqscocloud(ngrid,nq)
321	REAL zdtcocloud(ngrid,nlayer)
322	REAL rice_ch4(ngrid,nlayer) ! Methane ice geometric mean radius (m)
323	REAL rice_co(ngrid,nlayer) ! CO ice geometric mean radius (m)
324
325	REAL zdqsch4fast(ngrid) ! used only for fast model nogcm
326	REAL zdqch4fast(ngrid) ! used only for fast model nogcm
327	REAL zdqscofast(ngrid) ! used only for fast model nogcm
328	REAL zdqcofast(ngrid) ! used only for fast model nogcm
329	REAL zdqflow(ngrid,nq)
330
331	REAL zdteuv(ngrid,nlayer) ! (K/s)
332	REAL zdtconduc(ngrid,nlayer) ! (K/s)
333	REAL zdumolvis(ngrid,nlayer)
334	REAL zdvmolvis(ngrid,nlayer)
335	real zdqmoldiff(ngrid,nlayer,nq)
336
337	! Haze relatated tendancies
338	REAL zdqhaze(ngrid,nlayer,nq)
339	REAL zdqprodhaze(ngrid,nq)
340	REAL zdqsprodhaze(ngrid)
341	REAL zdqhaze_col(ngrid)
342	REAL zdqphot_prec(ngrid,nlayer)
343	REAL zdqphot_ch4(ngrid,nlayer)
344	REAL zdqconv_prec(ngrid,nlayer)
345	REAL zdq_source(ngrid,nlayer,nq)
346	! Fast Haze relatated tendancies
347	REAL fluxbot(ngrid)
348	REAL gradflux(ngrid)
349	REAL fluxlym_sol_bot(ngrid) ! Solar flux Lyman alpha ph.m-2.s-1 reaching the surface
350	REAL fluxlym_ipm_bot(ngrid) ! IPM (Interplanetary) flux Lyman alpha ph.m-2.s-1 reaching the surface
351	REAL flym_sol(ngrid) ! Incident Solar flux Lyman alpha ph.m-2.s-1
352	REAL flym_ipm(ngrid) ! Incident IPM (Interplanetary) flux Lyman alpha ph.m-2.s-1
353
354
355
356	REAL array_zero1(ngrid)
357	REAL array_zero2(ngrid,nlayer)
358
359	! For Winds : (m/s/s)
360	real zdvadj(ngrid,nlayer), zduadj(ngrid,nlayer) ! Convadj routine.
361	real zdumr(ngrid,nlayer), zdvmr(ngrid,nlayer) ! Mass_redistribution routine.
362	real zdvdif(ngrid,nlayer), zdudif(ngrid,nlayer) ! Turbdiff/vdifc routines.
363	real zdhdif(ngrid,nlayer) ! Turbdiff/vdifc routines.
364	real zdhadj(ngrid,nlayer) ! Convadj routine.
365	REAL zdvc(ngrid,nlayer),zduc(ngrid,nlayer) ! condense_n2 routine.
366
367	! For Pressure and Mass :
368	real zdmassmr(ngrid,nlayer) ! Atmospheric Mass tendency for mass_redistribution (kg_of_air/m2/s).
369	real zdmassmr_col(ngrid) ! Atmospheric Column Mass tendency for mass_redistribution (kg_of_air/m2/s).
370	real zdpsrfmr(ngrid) ! Pressure tendency for mass_redistribution routine (Pa/s).
371
372
373
374	! Local variables for LOCAL CALCULATIONS:
375	! ---------------------------------------
376	real zflubid(ngrid)
377	real zplanck(ngrid),zpopsk(ngrid,nlayer)
378	real ztim1,ztim2,ztim3, z1,z2
379	real ztime_fin
380	real zdh(ngrid,nlayer)
381	real gmplanet
382	real taux(ngrid),tauy(ngrid)
383
384
385	! local variables for DIAGNOSTICS : (diagfi & stat)
386	! -------------------------------------------------
387	real ps(ngrid) ! Surface Pressure.
388	real zt(ngrid,nlayer) ! Atmospheric Temperature.
389	real zu(ngrid,nlayer),zv(ngrid,nlayer) ! Zonal and Meridional Winds.
390	real zq(ngrid,nlayer,nq) ! Atmospheric Tracers.
391	real zdtadj(ngrid,nlayer) ! Convadj Diagnostic.
392	real zdtdyn(ngrid,nlayer) ! Dynamical Heating (K/s).
393	real zdudyn(ngrid,nlayer) ! Dynamical Zonal Wind tendency (m.s-2).
394
395	real reff(ngrid,nlayer) ! Effective dust radius (used if doubleq=T).
396	real vmr(ngrid,nlayer) ! volume mixing ratio
397	real time_phys
398
399	real ISR,ASR,OLR,GND,DYN,GSR,Ts1,Ts2,Ts3,TsS ! for Diagnostic.
400
401	real qcol(ngrid,nq) ! Tracer Column Mass (kg/m2).
402
403	! Pluto adding variables
404	real vmr_ch4(ngrid) ! vmr ch4
405	real vmr_co(ngrid) ! vmr co
406	real rho(ngrid,nlayer) ! density
407	real zrho_ch4(ngrid,nlayer) ! density methane kg.m-3
408	real zrho_co(ngrid,nlayer) ! density CO kg.m-3
409	real zrho_haze(ngrid,nlayer) ! density haze kg.m-3
410	real zdqrho_photprec(ngrid,nlayer) !photolysis rate kg.m-3.s-1
411	real zq1temp_ch4(ngrid) !
412	real qsat_ch4(ngrid) !
413	real qsat_ch4_l1(ngrid) !
414	! CHARACTER(LEN=20) :: txt ! to temporarly store text for eddy tracers
415	real profmmr(ngrid,nlayer) ! fixed profile of haze if haze_proffix
416	real sensiblehf1(ngrid) ! sensible heat flux
417	real sensiblehf2(ngrid) ! sensible heat flux
418
419	! included by RW for H2O Manabe scheme
420	real rneb_man(ngrid,nlayer) ! H2O cloud fraction (moistadj).
421	real rneb_lsc(ngrid,nlayer) ! H2O cloud fraction (large scale).
422
423
424	! to test energy conservation (RW+JL)
425	real mass(ngrid,nlayer),massarea(ngrid,nlayer)
426	real dEtot, dEtots, AtmToSurf_TurbFlux
427	real,save :: dEtotSW, dEtotsSW, dEtotLW, dEtotsLW
428	!$OMP THREADPRIVATE(dEtotSW, dEtotsSW, dEtotLW, dEtotsLW)
429
430	!JL12 conservation test for mean flow kinetic energy has been disabled temporarily
431
432	real dtmoist_max,dtmoist_min
433	real dItot, dItot_tmp, dVtot, dVtot_tmp
434
435
436	real dWtot, dWtot_tmp, dWtots, dWtots_tmp
437
438	real psat_tmp ! AF24: to remove?
439
440	real qsat_generic(ngrid,nlayer,nq) ! generic condensable tracers (GCS) specific concentration at saturation (kg/kg_of_air).
441	real RH_generic(ngrid,nlayer,nq) ! generic condensable tracers (GCS) Relative humidity.
442	real rneb_generic(ngrid,nlayer,nq) ! GCS cloud fraction (generic condensation).
443	real psat_tmp_generic
444	real, save :: metallicity ! metallicity of planet --- is not used here, but necessary to call function Psat_generic
445	!$OMP THREADPRIVATE(metallicity)
446
447	real reffrad_generic_zeros_for_wrf(ngrid,nlayer) ! !!! this is temporary, it is only a list of zeros, it will be replaced when a generic aerosol will be implemented
448
449	! For Clear Sky Case. (AF24: deleted)
450
451	real nconsMAX, vdifcncons(ngrid), cadjncons(ngrid) ! Vdfic water conservation test. By RW
452
453	real muvar(ngrid,nlayer+1) ! For Runaway Greenhouse 1D study. By RW
454
455	real,save,allocatable :: reffcol(:,:)
456	!$OMP THREADPRIVATE(reffcol)
457
458	! Non-oro GW tendencies
459	REAL d_u_hin(ngrid,nlayer), d_v_hin(ngrid,nlayer)
460	REAL d_t_hin(ngrid,nlayer)
461	! Diagnostics 2D of gw_nonoro
462	REAL zustrhi(ngrid), zvstrhi(ngrid)
463
464
465	real :: tsurf2(ngrid)
466	!! real :: flux_o(ngrid),flux_g(ngrid)
467	real :: flux_g(ngrid)
468	real :: flux_sens_lat(ngrid)
469	real :: qsurfint(ngrid,nq)
470	#ifdef MESOSCALE
471	REAL :: lsf_dt(nlayer)
472	REAL :: lsf_dq(nlayer)
473	#endif
474
475	! flags to trigger extra sanity checks
476	logical, save :: check_physics_inputs=.false.
477	logical, save :: check_physics_outputs=.false.
478	!$OPM THREADPRIVATE(check_physics_inputs,check_physics_outputs)
479
480	! Misc
481	character*2 :: str2
482	character(len=10) :: tmp1
483	character(len=10) :: tmp2
484	!==================================================================================================
485
486	! -----------------
487	! I. INITIALISATION
488	! -----------------
489
490	! --------------------------------
491	! I.1 First Call Initialisation.
492	! --------------------------------
493	if (firstcall) then
494	call getin_p("check_physics_inputs", check_physics_inputs)
495	call getin_p("check_physics_outputs", check_physics_outputs)
496
497	! Allocate saved arrays (except for 1D model, where this has already
498	! been done)
499	#ifndef MESOSCALE
500	if (ngrid>1) call phys_state_var_init(nq)
501	#endif
502
503	! Variables set to 0
504	! ~~~~~~~~~~~~~~~~~~
505	dtrad(:,:) = 0.0
506	fluxrad(:) = 0.0
507	tau_col(:) = 0.0
508	zdtsw(:,:) = 0.0
509	zdtlw(:,:) = 0.0
510
511	! Initialize tracer names, indexes and properties.
512	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
513	IF (.NOT.ALLOCATED(noms)) ALLOCATE(noms(nq)) ! (because noms is an argument of physdem1 whether or not tracer is on)
514	if (tracer) then
515	call initracer(ngrid,nq)
516	! if(photochem) then !AF24: removed
517	endif
518	! Initialize aerosol indexes.
519	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~
520	! call iniaerosol
521	! allocate related local arrays
522	! (need be allocated instead of automatic because of "naerkind")
523	allocate(aerosol(ngrid,nlayer,naerkind))
524	allocate(reffcol(ngrid,naerkind))
525
526	#ifdef CPP_XIOS
527	! Initialize XIOS context
528	write(,) "physiq: call wxios_context_init"
529	CALL wxios_context_init
530	#endif
531
532	! Read 'startfi.nc' file.
533	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
534	#ifndef MESOSCALE
535	call phyetat0(startphy_file, &
536	ngrid,nlayer,"startfi.nc",0,0,nsoilmx,nq, &
537	day_ini,time_phys,tsurf,tsoil,emis,q2,qsurf)
538
539	#else
540
541	day_ini = pday
542	#endif
543
544	#ifndef MESOSCALE
545	if (.not.startphy_file) then
546	! additionnal "academic" initialization of physics
547	if (is_master) write(,) "Physiq: initializing tsurf(:) to pt(:,1) !!"
548	tsurf(:)=pt(:,1)
549	if (is_master) write(,) "Physiq: initializing tsoil(:) to pt(:,1) !!"
550	do isoil=1,nsoilmx
551	tsoil(1:ngrid,isoil)=tsurf(1:ngrid)
552	enddo
553	if (is_master) write(,) "Physiq: initializing day_ini to pday !"
554	day_ini=pday
555	endif
556	#endif
557	if (pday.ne.day_ini) then
558	write(,) "ERROR in physiq.F90:"
559	write(,) "bad synchronization between physics and dynamics"
560	write(,) "dynamics day: ",pday
561	write(,) "physics day: ",day_ini
562	stop
563	endif
564
565	write (,) 'In physiq day_ini =', day_ini
566
567	! Initialize albedo calculation.
568	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
569	albedo(:,:)=0.0
570	albedo_bareground(:)=0.0
571	albedo_snow_SPECTV(:)=0.0
572	albedo_n2_ice_SPECTV(:)=0.0
573	call surfini(ngrid,nq,qsurf,albedo,albedo_bareground,albedo_snow_SPECTV,albedo_n2_ice_SPECTV)
574
575	! Initialize orbital calculation.
576	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
577	call iniorbit(apoastr,periastr,year_day,peri_day,obliquit)
578
579
580	! Initialize soil.
581	! ~~~~~~~~~~~~~~~~
582	if (callsoil) then
583	call soil(ngrid,nsoilmx,firstcall,lastcall,inertiedat, &
584	ptimestep,tsurf,tsoil,capcal,fluxgrd)
585	else ! else of 'callsoil'.
586	print*,'WARNING! Thermal conduction in the soil turned off'
587	capcal(:)=1.e6
588	fluxgrd(:)=intheat
589	print*,'Flux from ground = ',intheat,' W m^-2'
590	endif ! end of 'callsoil'.
591
592	icount=1
593
594	! Initialize surface history variable.
595	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
596	qsurf_hist(:,:)=qsurf(:,:)
597
598	!! call WriteField_phy("post_qsurf_hist_qsurf",qsurf(1:ngrid,igcm_h2o_vap),1)
599
600	! Initialize variable for dynamical heating and zonal wind tendency diagnostic
601	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
602	ztprevious(:,:)=pt(:,:)
603	zuprevious(:,:)=pu(:,:)
604
605	! Set temperature just above condensation temperature (for Early Mars)
606	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
607	if(nearn2cond) then
608	write(,)' WARNING! Starting at Tcond+1K'
609	do l=1, nlayer
610	do ig=1,ngrid
611	pdt(ig,l)= ((-3167.8)/(log(.01*pplay(ig,l))-23.23)+4 &
612	-pt(ig,l)) / ptimestep
613	enddo
614	enddo
615	endif
616
617	if(meanOLR)then
618	call system('rm -f rad_bal.out') ! to record global radiative balance.
619	call system('rm -f tem_bal.out') ! to record global mean/max/min temperatures.
620	call system('rm -f h2o_bal.out') ! to record global hydrological balance.
621	endif
622
623
624	!! Initialize variables for water cycle ! AF24: removed
625
626	! Set metallicity for GCS
627	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
628	metallicity=0.0 ! default value --- is not used here but necessary to call function Psat_generic
629	call getin_p("metallicity",metallicity) ! --- is not used here but necessary to call function Psat_generic
630
631	! Set some parameters for the thermal plume model !AF24: removed
632	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
633
634	#ifndef MESOSCALE
635	if (ngrid.ne.1) then ! Note : no need to create a restart file in 1d.
636	call physdem0("restartfi.nc",longitude,latitude,nsoilmx,ngrid,nlayer,nq, &
637	ptimestep,pday+nday,time_phys,cell_area, &
638	albedo_bareground,inertiedat,zmea,zstd,zsig,zgam,zthe)
639	endif
640
641	!! call WriteField_phy("post_physdem_qsurf",qsurf(1:ngrid,igcm_h2o_vap),1)
642	#endif
643	if (corrk) then
644	! We initialise the spectral grid here instead of
645	! at firstcall of callcorrk so we can output XspecIR, XspecVI
646	! when using Dynamico
647	print*, "physiq_mod: Correlated-k data base folder:",trim(datadir)
648	call getin_p("corrkdir",corrkdir)
649	print*,"corrkdir = ", corrkdir
650	write (tmp1, '(i4)') L_NSPECTI
651	write (tmp2, '(i4)') L_NSPECTV
652	banddir=trim(trim(adjustl(tmp1))//'x'//trim(adjustl(tmp2)))
653	banddir=trim(trim(adjustl(corrkdir))//'/'//trim(adjustl(banddir)))
654	call setspi !Basic infrared properties.
655	call setspv ! Basic visible properties.
656	call sugas_corrk ! Set up gaseous absorption properties.
657	if (aerohaze) then
658	call suaer_corrk ! Set up aerosol optical properties.
659	endif
660	endif
661
662	!! call WriteField_phy("post_corrk_firstcall_qsurf",qsurf(1:ngrid,igcm_h2o_vap),1)
663	! XIOS outputs
664	#ifdef CPP_XIOS
665
666	write(,) "physiq: call initialize_xios_output"
667	call initialize_xios_output(pday,ptime,ptimestep,daysec, &
668	year_day,presnivs,pseudoalt,WNOI,WNOV)
669	#endif
670
671	!! call WriteField_phy("post_xios_qsurf",qsurf(1:ngrid,igcm_h2o_vap),1)
672
673	write(,) "physiq: end of firstcall"
674	endif ! end of 'firstcall'
675
676	!! call WriteField_phy("post_firstcall_qsurf",qsurf(1:ngrid,igcm_h2o_vap),1)
677	!! call writediagfi(ngrid,"firstcall_post_qsurf"," "," ",2,qsurf(1:ngrid,igcm_h2o_vap))
678
679	if (check_physics_inputs) then
680	!check the validity of input fields coming from the dynamics
681	call check_physics_fields("begin physiq:", pt, pu, pv, pplev, pq)
682	endif
683
684	! call writediagfi(ngrid,"pre_physical_rnat"," "," ",2,rnat)
685	! call writediagfi(ngrid,"pre_physical_capcal"," "," ",2,capcal)
686
687	! ------------------------------------------------------
688	! I.2 Initializations done at every physical timestep:
689	! ------------------------------------------------------
690
691	#ifdef CPP_XIOS
692	! update XIOS time/calendar
693	call update_xios_timestep
694	#endif
695
696	! Initialize various variables
697	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
698
699	if ( .not.nearn2cond ) then
700	pdt(1:ngrid,1:nlayer) = 0.0
701	endif
702	zdtsurf(1:ngrid) = 0.0
703	pdq(1:ngrid,1:nlayer,1:nq) = 0.0
704	dqsurf(1:ngrid,1:nq)= 0.0
705	pdu(1:ngrid,1:nlayer) = 0.0
706	pdv(1:ngrid,1:nlayer) = 0.0
707	pdpsrf(1:ngrid) = 0.0
708	zflubid(1:ngrid) = 0.0
709	flux_sens_lat(1:ngrid) = 0.0
710	taux(1:ngrid) = 0.0
711	tauy(1:ngrid) = 0.0
712
713	zday=pday+ptime ! Compute time, in sols (and fraction thereof).
714
715	! Compute Stellar Longitude (Ls), and orbital parameters.
716	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
717	if (season) then
718	call stellarlong(zday,zls)
719	else
720	call stellarlong(noseason_day,zls)
721	end if
722
723	call orbite(zls,dist_star,declin,right_ascen)
724
725	if (diurnal) then
726	zlss=-2.pi(zday-.5)
727	else if(diurnal .eqv. .false.) then
728	zlss=9999.
729	endif
730
731
732	glat(:) = g !AF24: removed oblateness
733
734	! Compute geopotential between layers.
735	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
736	zzlay(1:ngrid,1:nlayer)=pphi(1:ngrid,1:nlayer)
737	do l=1,nlayer
738	zzlay(1:ngrid,l)= zzlay(1:ngrid,l)/glat(1:ngrid)
739	enddo
740
741	zzlev(1:ngrid,1)=0.
742
743	do l=2,nlayer
744	do ig=1,ngrid
745	z1=(pplay(ig,l-1)+pplev(ig,l))/(pplay(ig,l-1)-pplev(ig,l))
746	z2=(pplev(ig,l)+pplay(ig,l))/(pplev(ig,l)-pplay(ig,l))
747	zzlev(ig,l)=(z1zzlay(ig,l-1)+z2zzlay(ig,l))/(z1+z2)
748	enddo
749	enddo
750
751	!Altitude of top interface (nlayer+1), using the thicknesss of the level below the top one. LT22
752
753	zzlev(1:ngrid,nlayer+1) = 2*zzlev(1:ngrid,nlayer)-zzlev(1:ngrid,nlayer-1)
754
755	! Compute potential temperature
756	! Note : Potential temperature calculation may not be the same in physiq and dynamic...
757	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
758	do l=1,nlayer
759	do ig=1,ngrid
760	zpopsk(ig,l)=(pplay(ig,l)/pplev(ig,1))**rcp
761	zh(ig,l)=pt(ig,l)/zpopsk(ig,l)
762	mass(ig,l) = (pplev(ig,l) - pplev(ig,l+1))/glat(ig)
763	massarea(ig,l)=mass(ig,l)*cell_area(ig)
764	enddo
765	enddo
766
767	! Compute vertical velocity (m/s) from vertical mass flux
768	! w = F / (rhoarea) and rho = P/(rT)
769	! But first linearly interpolate mass flux to mid-layers
770	if (.not.fast) then
771	do l=1,nlayer-1
772	pw(1:ngrid,l)=0.5*(flxw(1:ngrid,l)+flxw(1:ngrid,l+1))
773	enddo
774	pw(1:ngrid,nlayer)=0.5*flxw(1:ngrid,nlayer) ! since flxw(nlayer+1)=0
775	do l=1,nlayer
776	pw(1:ngrid,l)=(pw(1:ngrid,l)rpt(1:ngrid,l)) / &
777	(pplay(1:ngrid,l)*cell_area(1:ngrid))
778	enddo
779	! omega in Pa/s
780	do l=1,nlayer-1
781	omega(1:ngrid,l)=0.5*(flxw(1:ngrid,l)+flxw(1:ngrid,l+1))
782	enddo
783	omega(1:ngrid,nlayer)=0.5*flxw(1:ngrid,nlayer) ! since flxw(nlayer+1)=0
784	do l=1,nlayer
785	omega(1:ngrid,l)=g*omega(1:ngrid,l)/cell_area(1:ngrid)
786	enddo
787	endif
788	!---------------------------------
789	! II. Compute radiative tendencies
790	!---------------------------------
791
792	! Compute local stellar zenith angles
793	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
794	if (diurnal) then
795	ztim1=SIN(declin)
796	ztim2=COS(declin)COS(2.pi*(zday-.5))
797	ztim3=-COS(declin)SIN(2.pi*(zday-.5))
798
799	call stelang(ngrid,sinlon,coslon,sinlat,coslat, &
800	ztim1,ztim2,ztim3,mu0,fract)
801	else if(diurnal .eqv. .false.) then
802
803	call mucorr(ngrid,declin,latitude,mu0,fract,10000.,rad)
804	! WARNING: this function appears not to work in 1D
805
806	if ((ngrid.eq.1).and.(global1d)) then ! Fixed zenith angle 'szangle' in 1D simulations w/ globally-averaged sunlight.
807	mu0 = cos(pi*szangle/180.0)
808	endif
809
810	endif
811
812	if (callrad) then
813	if( mod(icount-1,iradia).eq.0.or.lastcall) then
814
815	! Eclipse incoming sunlight !AF24: removed
816
817	!! call writediagfi(ngrid,"corrk_pre_dqsurf"," "," ",2,dqsurf(1:ngrid,igcm_h2o_vap))
818	!! call writediagfi(ngrid,"corrk_pre_qsurf"," "," ",2,qsurf(1:ngrid,igcm_h2o_vap))
819
820
821	if (corrk) then
822
823	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
824	! II.a Call correlated-k radiative transfer scheme
825	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
826	if(kastprof)then
827	print*,'kastprof should not = true here'
828	call abort
829	endif
830	! if(water) then !AF24: removed
831
832	if(generic_condensation) then
833	do iq=1,nq
834
835	call generic_tracer_index(nq,iq,igcm_generic_vap,igcm_generic_ice,call_ice_vap_generic)
836
837	if (call_ice_vap_generic) then ! to call only one time the ice/vap pair of a tracer
838
839	epsi_generic=constants_epsi_generic(iq)
840
841	muvar(1:ngrid,1:nlayer)=mugaz/(1.e0+(1.e0/epsi_generic-1.e0)*pq(1:ngrid,1:nlayer,igcm_generic_vap))
842	muvar(1:ngrid,nlayer+1)=mugaz/(1.e0+(1.e0/epsi_generic-1.e0)*pq(1:ngrid,nlayer,igcm_generic_vap))
843
844	endif
845	end do ! do iq=1,nq loop on tracers
846	! take into account generic condensable specie (GCS) effect on mean molecular weight
847
848	else
849	muvar(1:ngrid,1:nlayer+1)=mugaz
850	endif
851
852	! if(ok_slab_ocean) then !AF24: removed
853
854	! standard callcorrk
855	! clearsky=.false.
856	call callcorrk(ngrid,nlayer,pq,nq,qsurf, &
857	albedo,albedo_equivalent,emis,mu0,pplev,pplay,pt, &
858	tsurf,fract,dist_star,aerosol,muvar, &
859	zdtlw,zdtsw,fluxsurf_lw,fluxsurf_sw, &
860	fluxsurfabs_sw,fluxtop_lw, &
861	fluxabs_sw,fluxtop_dn,OLR_nu,OSR_nu,GSR_nu, &
862	int_dtaui,int_dtauv, &
863	tau_col,cloudfrac,totcloudfrac, &
864	.false.,firstcall,lastcall)
865
866	!GG (feb2021): Option to "artificially" decrease the raditive time scale in
867	!the deep atmosphere press > 0.1 bar. Suggested by MT.
868	!! COEFF_RAD to be "tuned" to facilitate convergence of tendency
869
870	!coeff_rad=0. ! 0 values, it doesn't accelerate the convergence
871	!coeff_rad=0.5
872	!coeff_rad=1.
873	!do l=1, nlayer
874	! do ig=1,ngrid
875	! if(pplay(ig,l).ge.1.d4) then
876	! zdtsw(ig,l)=zdtsw(ig,l)(pplay(ig,l)/1.d4)*coeff_rad
877	! zdtlw(ig,l)=zdtlw(ig,l)(pplay(ig,l)/1.d4)*coeff_rad
878	! endif
879	! enddo
880	!enddo
881
882	! AF24: removed CLFvarying Option
883
884	! if(ok_slab_ocean) then
885	! tsurf(:)=tsurf2(:)
886	! endif
887
888
889	! Radiative flux from the sky absorbed by the surface (W.m-2).
890	GSR=0.0
891	fluxrad_sky(1:ngrid)=emis(1:ngrid)*fluxsurf_lw(1:ngrid)+fluxsurfabs_sw(1:ngrid)
892
893	!if(noradsurf)then ! no lower surface; SW flux just disappears
894	! GSR = SUM(fluxsurf_sw(1:ngrid)*cell_area(1:ngrid))/totarea
895	! fluxrad_sky(1:ngrid)=emis(1:ngrid)*fluxsurf_lw(1:ngrid)
896	! print*,'SW lost in deep atmosphere = ',GSR,' W m^-2'
897	!endif
898
899	! Net atmospheric radiative heating rate (K.s-1)
900	dtrad(1:ngrid,1:nlayer)=zdtsw(1:ngrid,1:nlayer)+zdtlw(1:ngrid,1:nlayer)
901
902	! Late initialization of the Ice Spectral Albedo. We needed the visible bands to do that !
903	if (firstcall .and. albedo_spectral_mode) then
904	call spectral_albedo_calc(albedo_snow_SPECTV)
905	endif
906
907	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
908	! II.b Call Newtonian cooling scheme !AF24: removed
909	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
910	else
911	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
912	! II.c Atmosphere has no radiative effect
913	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
914	fluxtop_dn(1:ngrid) = fract(1:ngrid)mu0(1:ngrid)Fat1AU/dist_star**2
915	if(ngrid.eq.1)then ! / by 4 globally in 1D case...
916	fluxtop_dn(1) = fract(1)Fat1AU/dist_star*2/2.0
917	endif
918	fluxsurf_sw(1:ngrid) = fluxtop_dn(1:ngrid)
919	print*,'------------WARNING---WARNING------------' ! by MT2015.
920	print*,'You are in corrk=false mode, '
921	print*,'and the surface albedo is taken equal to the first visible spectral value'
922
923	albedo_equivalent(1:ngrid)=albedo(1:ngrid,1)
924	fluxsurfabs_sw(1:ngrid) = fluxtop_dn(1:ngrid)*(1.-albedo(1:ngrid,1))
925	fluxabs_sw(1:ngrid)=fluxsurfabs_sw(1:ngrid)
926	fluxrad_sky(1:ngrid) = fluxsurfabs_sw(1:ngrid)
927	fluxtop_lw(1:ngrid) = emis(1:ngrid)sigmatsurf(1:ngrid)**4
928
929	dtrad(1:ngrid,1:nlayer)=0.0 ! no atmospheric radiative heating
930
931	endif ! end of corrk
932
933	endif ! of if(mod(icount-1,iradia).eq.0)
934
935
936	! Transformation of the radiative tendencies
937	! ------------------------------------------
938	zplanck(1:ngrid)=tsurf(1:ngrid)*tsurf(1:ngrid)
939	zplanck(1:ngrid)=emis(1:ngrid)sigmazplanck(1:ngrid)*zplanck(1:ngrid)
940	fluxrad(1:ngrid)=fluxrad_sky(1:ngrid)-zplanck(1:ngrid)
941	pdt(1:ngrid,1:nlayer)=pdt(1:ngrid,1:nlayer)+dtrad(1:ngrid,1:nlayer)
942
943	! Test of energy conservation
944	!----------------------------
945	if(enertest)then
946	call planetwide_sumval(cppmassarea(:,:)zdtsw(:,:)/totarea_planet,dEtotSW)
947	call planetwide_sumval(cppmassarea(:,:)zdtlw(:,:)/totarea_planet,dEtotLW)
948	!call planetwide_sumval(fluxsurf_sw(:)(1.-albedo_equivalent(:))cell_area(:)/totarea_planet,dEtotsSW) !JL13 carefull, albedo can have changed since the last time we called corrk
949	call planetwide_sumval(fluxsurfabs_sw(:)*cell_area(:)/totarea_planet,dEtotsSW) !JL13 carefull, albedo can have changed since the last time we called corrk
950	call planetwide_sumval((fluxsurf_lw(:)emis(:)-zplanck(:))cell_area(:)/totarea_planet,dEtotsLW)
951	dEzRadsw(:,:)=cppmass(:,:)zdtsw(:,:)
952	dEzRadlw(:,:)=cppmass(:,:)zdtlw(:,:)
953	if (is_master) then
954	print*,'---------------------------------------------------------------'
955	print*,'In corrk SW atmospheric heating =',dEtotSW,' W m-2'
956	print*,'In corrk LW atmospheric heating =',dEtotLW,' W m-2'
957	print*,'atmospheric net rad heating (SW+LW) =',dEtotLW+dEtotSW,' W m-2'
958	print*,'In corrk SW surface heating =',dEtotsSW,' W m-2'
959	print*,'In corrk LW surface heating =',dEtotsLW,' W m-2'
960	print*,'surface net rad heating (SW+LW) =',dEtotsLW+dEtotsSW,' W m-2'
961	endif
962	endif ! end of 'enertest'
963
964	endif ! of if (callrad)
965
966	!! call writediagfi(ngrid,"vdifc_pre_dqsurf"," "," ",2,dqsurf(1:ngrid,igcm_h2o_vap))
967	!! call writediagfi(ngrid,"vdifc_pre_qsurf"," "," ",2,qsurf(1:ngrid,igcm_h2o_vap))
968
969
970	! --------------------------------------------
971	! III. Vertical diffusion (turbulent mixing) :
972	! --------------------------------------------
973
974	if (calldifv) then
975
976	zflubid(1:ngrid)=fluxrad(1:ngrid)+fluxgrd(1:ngrid)
977
978	! JL12 the following if test is temporarily there to allow us to compare the old vdifc with turbdiff.
979	if (UseTurbDiff) then
980
981	call turbdiff(ngrid,nlayer,nq, &
982	ptimestep,capcal, &
983	pplay,pplev,zzlay,zzlev,z0, &
984	pu,pv,pt,zpopsk,pq,tsurf,emis,qsurf, &
985	pdt,pdq,zflubid, &
986	zdudif,zdvdif,zdtdif,zdtsdif, &
987	sensibFlux,q2,zdqdif,zdqevap,zdqsdif, &
988	taux,tauy)
989
990	else
991
992	zdh(1:ngrid,1:nlayer)=pdt(1:ngrid,1:nlayer)/zpopsk(1:ngrid,1:nlayer)
993
994	call vdifc(ngrid,nlayer,nq,zpopsk, &
995	ptimestep,capcal,lwrite, &
996	pplay,pplev,zzlay,zzlev,z0, &
997	pu,pv,zh,pq,tsurf,emis,qsurf, &
998	zdh,pdq,zflubid, &
999	zdudif,zdvdif,zdhdif,zdtsdif, &
1000	sensibFlux,q2,zdqdif,zdqsdif)
1001
1002	zdtdif(1:ngrid,1:nlayer)=zdhdif(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer) ! for diagnostic only
1003	zdqevap(1:ngrid,1:nlayer)=0.
1004
1005	end if !end of 'UseTurbDiff'
1006
1007	zdtsurf(1:ngrid)=zdtsurf(1:ngrid)+zdtsdif(1:ngrid)
1008
1009	!!! this is always done, except for turbulence-resolving simulations
1010	if (.not. turb_resolved) then
1011	pdv(1:ngrid,1:nlayer)=pdv(1:ngrid,1:nlayer)+zdvdif(1:ngrid,1:nlayer)
1012	pdu(1:ngrid,1:nlayer)=pdu(1:ngrid,1:nlayer)+zdudif(1:ngrid,1:nlayer)
1013	pdt(1:ngrid,1:nlayer)=pdt(1:ngrid,1:nlayer)+zdtdif(1:ngrid,1:nlayer)
1014	endif
1015
1016	! if(ok_slab_ocean)then !AF24: removed
1017	! flux_sens_lat(1:ngrid)=(zdtsdif(1:ngrid)*capcal(1:ngrid)-fluxrad(1:ngrid))
1018	! endif
1019
1020	!! call writediagfi(ngrid,"vdifc_post_zdqsdif"," "," ",2,zdqsdif(1:ngrid,igcm_h2o_vap))
1021
1022	if (tracer) then
1023	pdq(1:ngrid,1:nlayer,1:nq)=pdq(1:ngrid,1:nlayer,1:nq)+ zdqdif(1:ngrid,1:nlayer,1:nq)
1024	dqsurf(1:ngrid,1:nq)=dqsurf(1:ngrid,1:nq) + zdqsdif(1:ngrid,1:nq)
1025	end if ! of if (tracer)
1026
1027	!! call writediagfi(ngrid,"vdifc_post_dqsurf"," "," ",2,dqsurf(1:ngrid,igcm_h2o_vap))
1028	!! call writediagfi(ngrid,"vdifc_post_qsurf"," "," ",2,qsurf(1:ngrid,igcm_h2o_vap))
1029
1030	! test energy conservation
1031	!-------------------------
1032	if(enertest)then
1033
1034	dEzdiff(:,:)=cppmass(:,:)zdtdif(:,:)
1035	do ig = 1, ngrid
1036	dEdiff(ig)=SUM(dEzdiff (ig,:))+ sensibFlux(ig)! subtract flux to the ground
1037	dEzdiff(ig,1)= dEzdiff(ig,1)+ sensibFlux(ig)! subtract flux to the ground
1038	enddo
1039
1040	call planetwide_sumval(dEdiff(:)*cell_area(:)/totarea_planet,dEtot)
1041	dEdiffs(:)=capcal(:)*zdtsdif(:)-zflubid(:)-sensibFlux(:)
1042	call planetwide_sumval(dEdiffs(:)*cell_area(:)/totarea_planet,dEtots)
1043	call planetwide_sumval(sensibFlux(:)*cell_area(:)/totarea_planet,AtmToSurf_TurbFlux)
1044
1045	if (is_master) then
1046
1047	if (UseTurbDiff) then
1048	print*,'In TurbDiff sensible flux (atm=>surf) =',AtmToSurf_TurbFlux,' W m-2'
1049	print*,'In TurbDiff non-cons atm nrj change =',dEtot,' W m-2'
1050	print*,'In TurbDiff (correc rad+latent heat) surf nrj change =',dEtots,' W m-2'
1051	else
1052	print*,'In vdifc sensible flux (atm=>surf) =',AtmToSurf_TurbFlux,' W m-2'
1053	print*,'In vdifc non-cons atm nrj change =',dEtot,' W m-2'
1054	print*,'In vdifc (correc rad+latent heat) surf nrj change =',dEtots,' W m-2'
1055	end if
1056	endif ! end of 'is_master'
1057
1058	! JL12 : note that the black body radiative flux emitted by the surface has been updated by the implicit scheme but not given back elsewhere.
1059	endif ! end of 'enertest'
1060
1061
1062	! ! Test water conservation. !AF24: removed
1063
1064	else ! calldifv
1065
1066	! if(.not.newtonian)then
1067	zdtsurf(1:ngrid) = zdtsurf(1:ngrid) + (fluxrad(1:ngrid) + fluxgrd(1:ngrid))/capcal(1:ngrid)
1068
1069	endif ! end of 'calldifv'
1070
1071
1072	!-------------------
1073	! IV. Convection :
1074	!-------------------
1075
1076	! ~~~~~~~~~~~~~~~~~~~~~~~~~~
1077	! IV.a Thermal plume model : AF24: removed
1078	! ~~~~~~~~~~~~~~~~~~~~~~~~~~
1079
1080	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1081	! IV.b Dry convective adjustment :
1082	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1083
1084	if(calladj) then
1085
1086	zdh(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer)/zpopsk(1:ngrid,1:nlayer)
1087	zduadj(1:ngrid,1:nlayer)=0.0
1088	zdvadj(1:ngrid,1:nlayer)=0.0
1089	zdhadj(1:ngrid,1:nlayer)=0.0
1090
1091
1092	call convadj(ngrid,nlayer,nq,ptimestep, &
1093	pplay,pplev,zpopsk, &
1094	pu,pv,zh,pq, &
1095	pdu,pdv,zdh,pdq, &
1096	zduadj,zdvadj,zdhadj, &
1097	zdqadj)
1098
1099	pdu(1:ngrid,1:nlayer) = pdu(1:ngrid,1:nlayer) + zduadj(1:ngrid,1:nlayer)
1100	pdv(1:ngrid,1:nlayer) = pdv(1:ngrid,1:nlayer) + zdvadj(1:ngrid,1:nlayer)
1101	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer) + zdhadj(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer)
1102	zdtadj(1:ngrid,1:nlayer) = zdhadj(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer) ! for diagnostic only
1103
1104	if(tracer) then
1105	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + zdqadj(1:ngrid,1:nlayer,1:nq)
1106	end if
1107
1108	! Test energy conservation
1109	if(enertest)then
1110	call planetwide_sumval(cppmassarea(:,:)zdtadj(:,:)/totarea_planet,dEtot)
1111	if (is_master) print*,'In convadj atmospheric energy change =',dEtot,' W m-2'
1112	endif
1113
1114	! ! Test water conservation !AF24: removed
1115
1116	endif ! end of 'calladj'
1117	!----------------------------------------------
1118	! Non orographic Gravity Waves: AF24: removed
1119	!---------------------------------------------
1120
1121	!-----------------------------------------------
1122	! V. Nitrogen condensation-sublimation :
1123	!-----------------------------------------------
1124
1125	if (n2cond) then
1126
1127	if (.not.tracer) then
1128	print*,'We need a N2 ice tracer to condense N2'
1129	call abort
1130	endif
1131
1132	call condense_n2(ngrid,nlayer,nq,ptimestep, &
1133	capcal,pplay,pplev,tsurf,pt, &
1134	pphi,pdt,pdu,pdv,zdtsurf,pu,pv,pq,pdq, &
1135	qsurf(1,igcm_n2),albedo,emis, &
1136	zdtc,zdtsurfc,pdpsrf,zduc,zdvc, &
1137	zdqc,zdqsc(1,igcm_n2))
1138
1139	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer)+zdtc(1:ngrid,1:nlayer)
1140	pdv(1:ngrid,1:nlayer) = pdv(1:ngrid,1:nlayer)+zdvc(1:ngrid,1:nlayer)
1141	pdu(1:ngrid,1:nlayer) = pdu(1:ngrid,1:nlayer)+zduc(1:ngrid,1:nlayer)
1142	zdtsurf(1:ngrid) = zdtsurf(1:ngrid) + zdtsurfc(1:ngrid)
1143
1144	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq)+ zdqc(1:ngrid,1:nlayer,1:nq)
1145	dqsurf(1:ngrid,igcm_n2) = dqsurf(1:ngrid,igcm_n2) + zdqsc(1:ngrid,igcm_n2)
1146
1147	!! call writediagfi(ngrid,"condense_n2_post_dqsurf"," "," ",2,dqsurf(1:ngrid,igcm_h2o_vap))
1148	!! call writediagfi(ngrid,"condense_n2_post_qsurf"," "," ",2,qsurf(1:ngrid,igcm_h2o_vap))
1149
1150	! test energy conservation
1151	if(enertest)then
1152	call planetwide_sumval(cppmassarea(:,:)zdtc(:,:)/totarea_planet,dEtot)
1153	call planetwide_sumval(capcal(:)zdtsurfc(:)cell_area(:)/totarea_planet,dEtots)
1154	if (is_master) then
1155	print*,'In n2cloud atmospheric energy change =',dEtot,' W m-2'
1156	print*,'In n2cloud surface energy change =',dEtots,' W m-2'
1157	endif
1158	endif
1159
1160	endif ! end of 'n2cond'
1161
1162
1163	!---------------------------------------------
1164	! VI. Specific parameterizations for tracers
1165	!---------------------------------------------
1166
1167	if (tracer) then
1168
1169	! ---------------------
1170	! VI.1. Water and ice !AF24: removed
1171	! ---------------------
1172	! -------------------------
1173	! VI.2. Photochemistry !AF24: removed
1174	! -------------------------
1175	! -------------------------
1176	! VI.3. Aerosol particles
1177	! -------------------------
1178
1179	!Generic Condensation
1180	if (generic_condensation) then
1181	call condensation_generic(ngrid,nlayer,nq,ptimestep,pplev,pplay, &
1182	pt,pq,pdt,pdq,dt_generic_condensation, &
1183	dqvaplscale_generic,dqcldlscale_generic,rneb_generic)
1184	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer)+dt_generic_condensation(1:ngrid,1:nlayer)
1185	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq)+dqvaplscale_generic(1:ngrid,1:nlayer,1:nq)
1186	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq)+dqcldlscale_generic(1:ngrid,1:nlayer,1:nq)
1187
1188	if(enertest)then
1189	do ig=1,ngrid
1190	genericconddE(ig) = cppSUM(mass(:,:)dt_generic_condensation(:,:))
1191	enddo
1192
1193	call planetwide_sumval(cppmassarea(:,:)dt_generic_condensation(:,:)/totarea_planet,dEtot)
1194
1195	if (is_master) print*,'In generic condensation atmospheric energy change =',dEtot,' W m-2'
1196	end if
1197
1198	! if (.not. water) then
1199	! Compute GCS (Generic Condensable Specie) cloud fraction. For now we can not have both water cloud fraction and GCS cloud fraction
1200	! Water is the priority
1201	! If you have set water and generic_condensation, then cloudfrac will be water cloudfrac
1202	!
1203	! If you have set generic_condensation (and not water) and you have set several GCS
1204	! then cloudfrac will be only the cloudfrac of the last generic tracer
1205	! (Because it is rewritten every tracer in the loop)
1206	!
1207	! Maybe one should create a cloudfrac_generic(ngrid,nlayer,nq) with 3 dimensions, the last one for tracers
1208
1209	! Let's loop on tracers
1210	cloudfrac(:,:)=0.0
1211	do iq=1,nq
1212	call generic_tracer_index(nq,iq,igcm_generic_vap,igcm_generic_ice,call_ice_vap_generic)
1213	if (call_ice_vap_generic) then ! to call only one time the ice/vap pair of a tracer
1214	do l = 1, nlayer
1215	do ig=1,ngrid
1216	cloudfrac(ig,l)=rneb_generic(ig,l,iq)
1217	enddo
1218	enddo
1219	endif
1220	end do ! do iq=1,nq loop on tracers
1221	! endif ! .not. water
1222
1223	endif !generic_condensation
1224
1225	!Generic Rain !AF24: removed
1226
1227	! Sedimentation.
1228	if (sedimentation) then
1229
1230	zdqsed(1:ngrid,1:nlayer,1:nq) = 0.0
1231	zdqssed(1:ngrid,1:nq) = 0.0
1232
1233	! if(watertest)then !AF24: removed
1234
1235	call callsedim(ngrid,nlayer,ptimestep, &
1236	pplev,zzlev,pt,pdt,pq,pdq, &
1237	zdqsed,zdqssed,nq)
1238
1239	! if(watertest)then !AF24: removed
1240
1241	! Whether it falls as rain or snow depends only on the surface temperature
1242	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + zdqsed(1:ngrid,1:nlayer,1:nq)
1243	dqsurf(1:ngrid,1:nq) = dqsurf(1:ngrid,1:nq) + zdqssed(1:ngrid,1:nq)
1244
1245	!! call writediagfi(ngrid,"callsedim_post_dqsurf"," "," ",2,dqsurf(1:ngrid,igcm_h2o_vap))
1246
1247	! ! Test water conservation !AF24: removed
1248
1249	end if ! end of 'sedimentation'
1250
1251	!! call writediagfi(ngrid,"mass_redist_pre_dqsurf"," "," ",2,dqsurf(1:ngrid,igcm_h2o_vap))
1252	!! call writediagfi(ngrid,"mass_redist_pre_qsurf"," "," ",2,qsurf(1:ngrid,igcm_h2o_vap))
1253
1254	! ---------------
1255	! VI.4. Updates
1256	! ---------------
1257
1258	! Updating Atmospheric Mass and Tracers budgets.
1259	if(mass_redistrib) then
1260
1261	zdmassmr(1:ngrid,1:nlayer) = mass(1:ngrid,1:nlayer) * 0
1262	! ( zdqevap(1:ngrid,1:nlayer) &
1263	! ! + zdqrain(1:ngrid,1:nlayer,igcm_h2o_vap) &
1264	! ! + dqmoist(1:ngrid,1:nlayer,igcm_h2o_vap) &
1265	! + dqvaplscale(1:ngrid,1:nlayer) )
1266
1267	do ig = 1, ngrid
1268	zdmassmr_col(ig)=SUM(zdmassmr(ig,1:nlayer))
1269	enddo
1270
1271	! call writediagfi(ngrid,"mass_evap","mass gain"," ",3,zdmassmr)
1272	! call writediagfi(ngrid,"mass_evap_col","mass gain col"," ",2,zdmassmr_col)
1273	call writediagfi(ngrid,"mass","mass","kg/m2",3,mass)
1274
1275	call mass_redistribution(ngrid,nlayer,nq,ptimestep, &
1276	capcal,pplay,pplev,pt,tsurf,pq,qsurf, &
1277	pu,pv,pdt,zdtsurf,pdq,pdu,pdv,zdmassmr, &
1278	zdtmr,zdtsurfmr,zdpsrfmr,zdumr,zdvmr,zdqmr,zdqsurfmr)
1279
1280	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + zdqmr(1:ngrid,1:nlayer,1:nq)
1281	dqsurf(1:ngrid,1:nq) = dqsurf(1:ngrid,1:nq) + zdqsurfmr(1:ngrid,1:nq)
1282	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer) + zdtmr(1:ngrid,1:nlayer)
1283	pdu(1:ngrid,1:nlayer) = pdu(1:ngrid,1:nlayer) + zdumr(1:ngrid,1:nlayer)
1284	pdv(1:ngrid,1:nlayer) = pdv(1:ngrid,1:nlayer) + zdvmr(1:ngrid,1:nlayer)
1285	pdpsrf(1:ngrid) = pdpsrf(1:ngrid) + zdpsrfmr(1:ngrid)
1286	zdtsurf(1:ngrid) = zdtsurf(1:ngrid) + zdtsurfmr(1:ngrid)
1287
1288	endif
1289
1290	! call writediagfi(ngrid,"mass_redistribution_post_dqsurf"," "," ",2,dqsurf(1:ngrid,igcm_h2o_vap))
1291
1292	!! call writediagfi(ngrid,"slab_pre_dqsurf"," "," ",2,dqsurf(1:ngrid,igcm_h2o_vap))
1293	!! call writediagfi(ngrid,"slab_pre_qsurf"," "," ",2,qsurf(1:ngrid,igcm_h2o_vap))
1294
1295
1296	! ------------------
1297	! VI.5. Slab Ocean !AF24: removed
1298	! ------------------
1299
1300	! -----------------------------
1301	! VI.6. Surface Tracer Update
1302	! -----------------------------
1303
1304	! AF24: deleted hydrology
1305
1306	qsurf(1:ngrid,1:nq) = qsurf(1:ngrid,1:nq) + ptimestep*dqsurf(1:ngrid,1:nq)
1307
1308	! Add qsurf to qsurf_hist, which is what we save in diagfi.nc. At the same time, we set the water
1309	! content of ocean gridpoints back to zero, in order to avoid rounding errors in vdifc, rain.
1310	qsurf_hist(:,:) = qsurf(:,:)
1311
1312	! if(ice_update)then
1313	! ice_min(1:ngrid)=min(ice_min(1:ngrid),qsurf(1:ngrid,igcm_h2o_ice))
1314	! endif
1315
1316	endif! end of if 'tracer'
1317
1318
1319	!------------------------------------------------
1320	! VII. Surface and sub-surface soil temperature
1321	!------------------------------------------------
1322
1323
1324	! ! Increment surface temperature
1325	! if(ok_slab_ocean)then !AF24: removed
1326
1327	tsurf(1:ngrid)=tsurf(1:ngrid)+ptimestep*zdtsurf(1:ngrid)
1328	! Compute soil temperatures and subsurface heat flux.
1329	if (callsoil) then
1330	call soil(ngrid,nsoilmx,.false.,lastcall,inertiedat, &
1331	ptimestep,tsurf,tsoil,capcal,fluxgrd)
1332	endif
1333
1334
1335	! if (ok_slab_ocean) then !AF24: removed
1336
1337	! Test energy conservation
1338	if(enertest)then
1339	call planetwide_sumval(cell_area(:)capcal(:)zdtsurf(:)/totarea_planet,dEtots)
1340	if (is_master) print*,'Surface energy change =',dEtots,' W m-2'
1341	endif
1342
1343
1344	!---------------------------------------------------
1345	! VIII. Perform diagnostics and write output files
1346	!---------------------------------------------------
1347
1348	! Note : For output only: the actual model integration is performed in the dynamics.
1349
1350
1351	! Temperature, zonal and meridional winds.
1352	zt(1:ngrid,1:nlayer) = pt(1:ngrid,1:nlayer) + pdt(1:ngrid,1:nlayer)*ptimestep
1353	zu(1:ngrid,1:nlayer) = pu(1:ngrid,1:nlayer) + pdu(1:ngrid,1:nlayer)*ptimestep
1354	zv(1:ngrid,1:nlayer) = pv(1:ngrid,1:nlayer) + pdv(1:ngrid,1:nlayer)*ptimestep
1355
1356	!! Recast thermal plume vertical velocity array for outputs
1357	!! AF24: removed
1358
1359	! Diagnostic.
1360	zdtdyn(1:ngrid,1:nlayer) = (pt(1:ngrid,1:nlayer)-ztprevious(1:ngrid,1:nlayer)) / ptimestep
1361	ztprevious(1:ngrid,1:nlayer) = zt(1:ngrid,1:nlayer)
1362
1363	zdudyn(1:ngrid,1:nlayer) = (pu(1:ngrid,1:nlayer)-zuprevious(1:ngrid,1:nlayer)) / ptimestep
1364	zuprevious(1:ngrid,1:nlayer) = zu(1:ngrid,1:nlayer)
1365
1366	if(firstcall)then
1367	zdtdyn(1:ngrid,1:nlayer)=0.0
1368	zdudyn(1:ngrid,1:nlayer)=0.0
1369	endif
1370
1371	! Dynamical heating diagnostic.
1372	do ig=1,ngrid
1373	fluxdyn(ig)= SUM(zdtdyn(ig,:) mass(ig,:))cpp
1374	enddo
1375
1376	! Tracers.
1377	zq(1:ngrid,1:nlayer,1:nq) = pq(1:ngrid,1:nlayer,1:nq) + pdq(1:ngrid,1:nlayer,1:nq)*ptimestep
1378
1379	! Surface pressure.
1380	ps(1:ngrid) = pplev(1:ngrid,1) + pdpsrf(1:ngrid)*ptimestep
1381
1382
1383	! Surface and soil temperature information
1384	call planetwide_sumval(cell_area(:)*tsurf(:)/totarea_planet,Ts1)
1385	call planetwide_minval(tsurf(:),Ts2)
1386	call planetwide_maxval(tsurf(:),Ts3)
1387	if(callsoil)then
1388	TsS = SUM(cell_area(:)*tsoil(:,nsoilmx))/totarea ! mean temperature at bottom soil layer
1389	if (is_master) then
1390	print*,' ave[Tsurf] min[Tsurf] max[Tsurf] ave[Tdeep]'
1391	print*,Ts1,Ts2,Ts3,TsS
1392	end if
1393	else
1394	if (is_master) then
1395	print*,' ave[Tsurf] min[Tsurf] max[Tsurf]'
1396	print*,Ts1,Ts2,Ts3
1397	endif
1398	end if
1399
1400
1401	! Check the energy balance of the simulation during the run
1402	if(corrk)then
1403
1404	call planetwide_sumval(cell_area(:)*fluxtop_dn(:)/totarea_planet,ISR)
1405	call planetwide_sumval(cell_area(:)*fluxabs_sw(:)/totarea_planet,ASR)
1406	call planetwide_sumval(cell_area(:)*fluxtop_lw(:)/totarea_planet,OLR)
1407	call planetwide_sumval(cell_area(:)*fluxgrd(:)/totarea_planet,GND)
1408	call planetwide_sumval(cell_area(:)*fluxdyn(:)/totarea_planet,DYN)
1409	do ig=1,ngrid
1410	if(fluxtop_dn(ig).lt.0.0)then
1411	print*,'fluxtop_dn has gone crazy'
1412	print*,'fluxtop_dn=',fluxtop_dn(ig)
1413	print*,'tau_col=',tau_col(ig)
1414	print*,'aerosol=',aerosol(ig,:,:)
1415	print*,'temp= ',pt(ig,:)
1416	print*,'pplay= ',pplay(ig,:)
1417	call abort
1418	endif
1419	end do
1420
1421	if(ngrid.eq.1)then
1422	DYN=0.0
1423	endif
1424
1425	if (is_master) then
1426	print*,' ISR ASR OLR GND DYN [W m^-2]'
1427	print*, ISR,ASR,OLR,GND,DYN
1428	endif
1429
1430	if(enertest .and. is_master)then
1431	print*,'SW flux/heating difference SW++ - ASR = ',dEtotSW+dEtotsSW-ASR,' W m-2'
1432	print*,'LW flux/heating difference LW++ - OLR = ',dEtotLW+dEtotsLW+OLR,' W m-2'
1433	print*,'LW energy balance LW++ + ASR = ',dEtotLW+dEtotsLW+ASR,' W m-2'
1434	endif
1435
1436	if(meanOLR .and. is_master)then
1437	if((ngrid.gt.1) .or. (mod(icount-1,ecritphy).eq.0))then
1438	! to record global radiative balance
1439	open(92,file="rad_bal.out",form='formatted',position='append')
1440	write(92,*) zday,ISR,ASR,OLR
1441	close(92)
1442	open(93,file="tem_bal.out",form='formatted',position='append')
1443	if(callsoil)then
1444	write(93,*) zday,Ts1,Ts2,Ts3,TsS
1445	else
1446	write(93,*) zday,Ts1,Ts2,Ts3
1447	endif
1448	close(93)
1449	endif
1450	endif
1451
1452	endif ! end of 'corrk'
1453
1454
1455	! Diagnostic to test radiative-convective timescales in code.
1456	if(testradtimes)then
1457	open(38,file="tau_phys.out",form='formatted',position='append')
1458	ig=1
1459	do l=1,nlayer
1460	write(38,*) -1./pdt(ig,l),pt(ig,l),pplay(ig,l)
1461	enddo
1462	close(38)
1463	print*,'As testradtimes enabled,'
1464	print*,'exiting physics on first call'
1465	call abort
1466	endif
1467
1468
1469	! Compute column amounts (kg m-2) if tracers are enabled.
1470	if(tracer)then
1471	qcol(1:ngrid,1:nq)=0.0
1472	do iq=1,nq
1473	do ig=1,ngrid
1474	qcol(ig,iq) = SUM( zq(ig,1:nlayer,iq) * mass(ig,1:nlayer))
1475	enddo
1476	enddo
1477
1478	if (aerohaze) then
1479	! Generalised for arbitrary aerosols now. By LK
1480	reffcol(1:ngrid,1:naerkind)=0.0
1481	! call n2_reffrad(ngrid,nlayer,nq,zq,reffrad(1,1,iaero_haze))
1482	if (haze_proffix.and.i_haze.gt.0.) then
1483	call haze_prof(ngrid,nlayer,zzlay,pplay,pt, &
1484	reffrad,profmmr)
1485	zdqhaze(:,:,i_haze)=(profmmr(:,:)-pq(:,:,igcm_n2)) & ! AF: TODO: replace by igcm_haze?
1486	/ptimestep
1487	else
1488	!! AF: TODO import from pluto.old?
1489	! call hazecloud(ngrid,nlayer,nq,ptimestep,&
1490	! pplay,pplev,pq,pdq,dist_sol,mu0,zfluxuv,zdqhaze,&
1491	! zdqphot_prec,zdqphot_ch4,zdqconv_prec,declin)
1492	endif
1493
1494	DO iq=1, nq ! should be updated
1495	DO l=1,nlayer
1496	DO ig=1,ngrid
1497	pdq(ig,l,iq)=pdq(ig,l,iq)+ zdqhaze(ig,l,iq)
1498	ENDDO
1499	ENDDO
1500	ENDDO
1501	endif ! end of aerohaze
1502	endif ! end of 'tracer'
1503
1504
1505	! ! Test for water conservation. !AF24: removed
1506
1507	! Calculate RH_generic (Generic Relative Humidity) for diagnostic.
1508	if(generic_condensation)then
1509	RH_generic(:,:,:)=0.0
1510	do iq=1,nq
1511
1512	call generic_tracer_index(nq,iq,igcm_generic_vap,igcm_generic_ice,call_ice_vap_generic)
1513
1514	if (call_ice_vap_generic) then ! to call only one time the ice/vap pair of a tracer
1515
1516	do l = 1, nlayer
1517	do ig=1,ngrid
1518	call Psat_generic(zt(ig,l),pplay(ig,l),metallicity,psat_tmp_generic,qsat_generic(ig,l,iq))
1519	RH_generic(ig,l,iq) = zq(ig,l,igcm_generic_vap) / qsat_generic(ig,l,iq)
1520	enddo
1521	enddo
1522
1523	end if
1524
1525	end do ! iq=1,nq
1526
1527	endif ! end of 'generic_condensation'
1528
1529
1530	if (is_master) print,'--> Ls =',zls180./pi
1531
1532
1533	!----------------------------------------------------------------------
1534	! Writing NetCDF file "RESTARTFI" at the end of the run
1535	!----------------------------------------------------------------------
1536
1537	! Note: 'restartfi' is stored just before dynamics are stored
1538	! in 'restart'. Between now and the writting of 'restart',
1539	! there will have been the itau=itau+1 instruction and
1540	! a reset of 'time' (lastacll = .true. when itau+1= itaufin)
1541	! thus we store for time=time+dtvr
1542
1543
1544
1545	if(lastcall) then
1546	ztime_fin = ptime + ptimestep/(float(iphysiq)*daysec)
1547
1548	!! Update surface ice distribution to iterate to steady state if requested
1549	!! AF24: removed
1550
1551	! endif
1552	#ifndef MESOSCALE
1553
1554	if (ngrid.ne.1) then
1555	write(,)'PHYSIQ: for physdem ztime_fin =',ztime_fin
1556
1557	call physdem1("restartfi.nc",nsoilmx,ngrid,nlayer,nq, &
1558	ptimestep,ztime_fin, &
1559	tsurf,tsoil,emis,q2,qsurf_hist)
1560	endif
1561	#endif
1562	! if(ok_slab_ocean) then
1563	! call ocean_slab_final!(tslab, seaice)
1564	! end if
1565
1566	endif ! end of 'lastcall'
1567
1568
1569	! -----------------------------------------------------------------
1570	! WSTATS: Saving statistics
1571	! -----------------------------------------------------------------
1572	! ("stats" stores and accumulates key variables in file "stats.nc"
1573	! which can later be used to make the statistic files of the run:
1574	! if flag "callstats" from callphys.def is .true.)
1575
1576
1577	call wstats(ngrid,"ps","Surface pressure","Pa",2,ps)
1578	call wstats(ngrid,"tsurf","Surface temperature","K",2,tsurf)
1579	call wstats(ngrid,"fluxsurf_lw", &
1580	"Thermal IR radiative flux to surface","W.m-2",2, &
1581	fluxsurf_lw)
1582	call wstats(ngrid,"fluxtop_lw", &
1583	"Thermal IR radiative flux to space","W.m-2",2, &
1584	fluxtop_lw)
1585
1586	! call wstats(ngrid,"fluxsurf_sw", &
1587	! "Solar radiative flux to surface","W.m-2",2, &
1588	! fluxsurf_sw_tot)
1589	! call wstats(ngrid,"fluxtop_sw", &
1590	! "Solar radiative flux to space","W.m-2",2, &
1591	! fluxtop_sw_tot)
1592
1593
1594	call wstats(ngrid,"ISR","incoming stellar rad.","W m-2",2,fluxtop_dn)
1595	call wstats(ngrid,"ASR","absorbed stellar rad.","W m-2",2,fluxabs_sw)
1596	call wstats(ngrid,"OLR","outgoing longwave rad.","W m-2",2,fluxtop_lw)
1597	!call wstats(ngrid,"ALB","Surface albedo"," ",2,albedo_equivalent)
1598	!call wstats(ngrid,"ALB_1st","First Band Surface albedo"," ",2,albedo(:,1))
1599	call wstats(ngrid,"p","Pressure","Pa",3,pplay)
1600	call wstats(ngrid,"temp","Atmospheric temperature","K",3,zt)
1601	call wstats(ngrid,"u","Zonal (East-West) wind","m.s-1",3,zu)
1602	call wstats(ngrid,"v","Meridional (North-South) wind","m.s-1",3,zv)
1603	call wstats(ngrid,"w","Vertical (down-up) wind","m.s-1",3,pw)
1604	call wstats(ngrid,"q2","Boundary layer eddy kinetic energy","m2.s-2",3,q2)
1605
1606	if (tracer) then
1607	do iq=1,nq
1608	call wstats(ngrid,noms(iq),noms(iq),'kg/kg',3,zq(1,1,iq))
1609	call wstats(ngrid,trim(noms(iq))//'_surf',trim(noms(iq))//'_surf', &
1610	'kg m^-2',2,qsurf(1,iq) )
1611	call wstats(ngrid,trim(noms(iq))//'_col',trim(noms(iq))//'_col', &
1612	'kg m^-2',2,qcol(1,iq) )
1613
1614	! call wstats(ngrid,trim(noms(iq))//'_reff', &
1615	! trim(noms(iq))//'_reff', &
1616	! 'm',3,reffrad(1,1,iq))
1617
1618	end do
1619
1620	endif ! end of 'tracer'
1621
1622	!AF24: deleted slab ocean and water
1623
1624	if(lastcall.and.callstats) then
1625	write (,) "Writing stats..."
1626	call mkstats(ierr)
1627	endif
1628
1629
1630	#ifndef MESOSCALE
1631
1632	!-----------------------------------------------------------------------------------------------------
1633	! OUTPUT in netcdf file "DIAGFI.NC", containing any variable for diagnostic
1634	!
1635	! Note 1 : output with period "ecritphy", set in "run.def"
1636	!
1637	! Note 2 : writediagfi can also be called from any other subroutine for any variable,
1638	! but its preferable to keep all the calls in one place ...
1639	!-----------------------------------------------------------------------------------------------------
1640
1641	call writediagfi(ngrid,"Ls","solar longitude","deg",0,zls*180./pi)
1642	call writediagfi(ngrid,"Lss","sub solar longitude","deg",0,zlss*180./pi)
1643	call writediagfi(ngrid,"RA","right ascension","deg",0,right_ascen*180./pi)
1644	call writediagfi(ngrid,"Declin","solar declination","deg",0,declin*180./pi)
1645	call writediagfi(ngrid,"tsurf","Surface temperature","K",2,tsurf)
1646	call writediagfi(ngrid,"ps","Surface pressure","Pa",2,ps)
1647
1648	if (.not.fast) then
1649	call writediagfi(ngrid,"temp","temperature","K",3,zt)
1650	call writediagfi(ngrid,"teta","potential temperature","K",3,zh)
1651	call writediagfi(ngrid,"u","Zonal wind","m.s-1",3,zu)
1652	call writediagfi(ngrid,"v","Meridional wind","m.s-1",3,zv)
1653	call writediagfi(ngrid,"w","Vertical wind","m.s-1",3,pw)
1654	call writediagfi(ngrid,"p","Pressure","Pa",3,pplay)
1655	endif
1656
1657	! Subsurface temperatures
1658	! call writediagsoil(ngrid,"tsurf","Surface temperature","K",2,tsurf)
1659	! call writediagsoil(ngrid,"temp","temperature","K",3,tsoil)
1660
1661	! ! Oceanic layers !AF24: removed
1662
1663	! ! Thermal plume model !AF24: removed
1664
1665	! GW non-oro outputs !AF24: removed
1666
1667	! Total energy balance diagnostics
1668	if(callrad)then
1669
1670	call writediagfi(ngrid,"ALB","Surface albedo"," ",2,albedo_equivalent)
1671	!call writediagfi(ngrid,"ALB_1st","First Band Surface albedo"," ",2,albedo(:,1))
1672	call writediagfi(ngrid,"ISR","incoming stellar rad.","W m-2",2,fluxtop_dn)
1673	call writediagfi(ngrid,"ASR","absorbed stellar rad.","W m-2",2,fluxabs_sw)
1674	call writediagfi(ngrid,"OLR","outgoing longwave rad.","W m-2",2,fluxtop_lw)
1675	call writediagfi(ngrid,"shad","rings"," ", 2, fract)
1676
1677	! call writediagfi(ngrid,"ASRcs","absorbed stellar rad (cs).","W m-2",2,fluxabs_sw1)
1678	! call writediagfi(ngrid,"OLRcs","outgoing longwave rad (cs).","W m-2",2,fluxtop_lw1)
1679	! call writediagfi(ngrid,"fluxsurfsw","sw surface flux.","W m-2",2,fluxsurf_sw)
1680	! call writediagfi(ngrid,"fluxsurflw","lw back radiation.","W m-2",2,fluxsurf_lw)
1681	! call writediagfi(ngrid,"fluxsurfswcs","sw surface flux (cs).","W m-2",2,fluxsurf_sw1)
1682	! call writediagfi(ngrid,"fluxsurflwcs","lw back radiation (cs).","W m-2",2,fluxsurf_lw1)
1683
1684	! if(ok_slab_ocean) then
1685	! call writediagfi(ngrid,"GND","heat flux from ground","W m-2",2,fluxgrdocean)
1686	! else
1687	call writediagfi(ngrid,"GND","heat flux from ground","W m-2",2,fluxgrd)
1688	! endif
1689
1690	call writediagfi(ngrid,"DYN","dynamical heat input","W m-2",2,fluxdyn)
1691
1692	endif ! end of 'callrad'
1693
1694	if(enertest) then
1695
1696	if (calldifv) then
1697
1698	call writediagfi(ngrid,"q2","turbulent kinetic energy","J.kg^-1",3,q2)
1699	call writediagfi(ngrid,"sensibFlux","sensible heat flux","w.m^-2",2,sensibFlux)
1700
1701	! call writediagfi(ngrid,"dEzdiff","turbulent diffusion heating (-sensible flux)","w.m^-2",3,dEzdiff)
1702	! call writediagfi(ngrid,"dEdiff","integrated turbulent diffusion heating (-sensible flux)","w.m^-2",2,dEdiff)
1703	! call writediagfi(ngrid,"dEdiffs","In TurbDiff (correc rad+latent heat) surf nrj change","w.m^-2",2,dEdiffs)
1704
1705	endif
1706
1707	if (corrk) then
1708	call writediagfi(ngrid,"dEzradsw","radiative heating","w.m^-2",3,dEzradsw)
1709	call writediagfi(ngrid,"dEzradlw","radiative heating","w.m^-2",3,dEzradlw)
1710	endif
1711
1712	! if(watercond) then !AF24: removed
1713
1714	if (generic_condensation) then
1715
1716	call writediagfi(ngrid,"genericconddE","heat from generic condensation","W m-2",2,genericconddE)
1717	call writediagfi(ngrid,"dt_generic_condensation","heating from generic condensation","K s-1",3,dt_generic_condensation)
1718
1719	endif
1720
1721	endif ! end of 'enertest'
1722
1723	! Diagnostics of optical thickness
1724	! Warning this is exp(-tau), I let you postproc with -log to have tau itself - JVO 19
1725	if (diagdtau) then
1726	do nw=1,L_NSPECTV
1727	write(str2,'(i2.2)') nw
1728	call writediagfi(ngrid,'dtauv'//str2,'Layer optical thickness attenuation in VI band '//str2,'',1,int_dtauv(:,nlayer:1:-1,nw))
1729	enddo
1730	do nw=1,L_NSPECTI
1731	write(str2,'(i2.2)') nw
1732	call writediagfi(ngrid,'dtaui'//str2,'Layer optical thickness attenuation in IR band '//str2,'',1,int_dtaui(:,nlayer:1:-1,nw))
1733	enddo
1734	endif
1735
1736
1737	! Temporary inclusions for heating diagnostics.
1738	call writediagfi(ngrid,"zdtsw","SW heating","T s-1",3,zdtsw)
1739	call writediagfi(ngrid,"zdtlw","LW heating","T s-1",3,zdtlw)
1740	call writediagfi(ngrid,"dtrad","radiative heating","K s-1",3,dtrad)
1741	call writediagfi(ngrid,"zdtdyn","Dyn. heating","T s-1",3,zdtdyn)
1742
1743	! For Debugging.
1744	!call writediagfi(ngrid,'rnat','Terrain type',' ',2,real(rnat))
1745	!call writediagfi(ngrid,'pphi','Geopotential',' ',3,pphi)
1746
1747
1748	! Output aerosols.!AF: TODO: write haze aerosols
1749	! if (igcm_n2_ice.ne.0.and.iaero_haze.ne.0) &
1750	! call writediagfi(ngrid,'N2ice_reff','N2ice_reff','m',3,reffrad(1,1,iaero_haze))
1751	! if (igcm_n2_ice.ne.0.and.iaero_haze.ne.0) &
1752	! call writediagfi(ngrid,'N2ice_reffcol','N2ice_reffcol','um kg m^-2',2,reffcol(1,iaero_haze))
1753	! if (igcm_h2o_ice.ne.0.and.iaero_h2o.ne.0) & !AF24: removed
1754
1755	! Output tracers.
1756	if (tracer) then
1757
1758	do iq=1,nq
1759	call writediagfi(ngrid,noms(iq),noms(iq),'kg/kg',3,zq(1,1,iq))
1760	call writediagfi(ngrid,trim(noms(iq))//'_surf',trim(noms(iq))//'_surf', &
1761	'kg m^-2',2,qsurf_hist(1,iq) )
1762	call writediagfi(ngrid,trim(noms(iq))//'_col',trim(noms(iq))//'_col', &
1763	'kg m^-2',2,qcol(1,iq) )
1764	! call writediagfi(ngrid,trim(noms(iq))//'_surf',trim(noms(iq))//'_surf', &
1765	! 'kg m^-2',2,qsurf(1,iq) )
1766
1767	! if(watercond.or.CLFvarying)then !AF24: removed
1768
1769	if(generic_condensation)then
1770	call writediagfi(ngrid,"rneb_generic","GCS cloud fraction (generic condensation)"," ",3,rneb_generic)
1771	call writediagfi(ngrid,"CLF","GCS cloud fraction"," ",3,cloudfrac)
1772	call writediagfi(ngrid,"RH_generic","GCS relative humidity"," ",3,RH_generic)
1773	endif
1774
1775	! if(generic_rain)then !AF24: removed
1776	! if((hydrology).and.(.not.ok_slab_ocean))then !AF24: removed
1777
1778	call writediagfi(ngrid,"tau_col","Total aerosol optical depth","[]",2,tau_col)
1779
1780	enddo ! end of 'nq' loop
1781
1782	endif ! end of 'tracer'
1783
1784
1785	! Output spectrum.
1786	if(specOLR.and.corrk)then
1787	call writediagspecIR(ngrid,"OLR3D","OLR(lon,lat,band)","W/m^2/cm^-1",3,OLR_nu)
1788	call writediagspecVI(ngrid,"OSR3D","OSR(lon,lat,band)","W/m^2/cm^-1",3,OSR_nu)
1789	call writediagspecVI(ngrid,"GSR3D","GSR(lon,lat,band)","W/m^2/cm^-1",3,GSR_nu)
1790	endif
1791
1792	#else
1793	comm_HR_SW(1:ngrid,1:nlayer) = zdtsw(1:ngrid,1:nlayer)
1794	comm_HR_LW(1:ngrid,1:nlayer) = zdtlw(1:ngrid,1:nlayer)
1795	comm_ALBEQ(1:ngrid)=albedo_equivalent(1:ngrid)
1796	if (.not.calldifv) comm_LATENT_HF(:)=0.0
1797	! if ((tracer).and.(water)) then !AF24: removed
1798
1799	if ((tracer).and.(generic_condensation)) then
1800	! .and.(.not. water)
1801
1802	! If you have set generic_condensation (and not water) and you have set several GCS
1803	! then the outputs given to WRF will be only the ones for the last generic tracer
1804	! (Because it is rewritten every tracer in the loop)
1805	! WRF can take only one moist tracer
1806
1807	do iq=1,nq
1808	call generic_tracer_index(nq,iq,igcm_generic_vap,igcm_generic_ice,call_ice_vap_generic)
1809
1810	if (call_ice_vap_generic) then ! to call only one time the ice/vap pair of a tracer
1811
1812	reffrad_generic_zeros_for_wrf(:,:) = 1.
1813
1814	comm_CLOUDFRAC(1:ngrid,1:nlayer) = cloudfrac(1:ngrid,1:nlayer)
1815	comm_TOTCLOUDFRAC(1:ngrid) = totcloudfrac(1:ngrid) !??????
1816	comm_SURFRAIN(1:ngrid) = zdqsrain_generic(1:ngrid,iq)
1817	comm_DQVAP(1:ngrid,1:nlayer) = pdq(1:ngrid,1:nlayer,igcm_generic_vap)
1818	comm_DQICE(1:ngrid,1:nlayer)=pdq(1:ngrid,1:nlayer,igcm_generic_ice)
1819	! comm_H2OICE_REFF(1:ngrid,1:nlayer) = reffrad_generic_zeros_for_wrf(1:ngrid,1:nlayer) ! for now zeros !
1820	!comm_H2OICE_REFF(1:ngrid,1:nlayer) = 0*zdtrain_generic(1:ngrid,1:nlayer) ! for now zeros !
1821	comm_REEVAP(1:ngrid) = reevap_precip_generic(1:ngrid,iq)
1822	comm_DTRAIN(1:ngrid,1:nlayer) = zdtrain_generic(1:ngrid,1:nlayer)
1823	comm_DTLSC(1:ngrid,1:nlayer) = dt_generic_condensation(1:ngrid,1:nlayer)
1824	comm_RH(1:ngrid,1:nlayer) = RH_generic(1:ngrid,1:nlayer,iq)
1825
1826	endif
1827	end do ! do iq=1,nq loop on tracers
1828
1829	else
1830	comm_CLOUDFRAC(1:ngrid,1:nlayer)=0.
1831	comm_TOTCLOUDFRAC(1:ngrid)=0.
1832	comm_SURFRAIN(1:ngrid)=0.
1833	comm_DQVAP(1:ngrid,1:nlayer)=0.
1834	comm_DQICE(1:ngrid,1:nlayer)=0.
1835	! comm_H2OICE_REFF(1:ngrid,1:nlayer)=0.
1836	comm_REEVAP(1:ngrid)=0.
1837	comm_DTRAIN(1:ngrid,1:nlayer)=0.
1838	comm_DTLSC(1:ngrid,1:nlayer)=0.
1839	comm_RH(1:ngrid,1:nlayer)=0.
1840
1841	endif ! if water, if generic_condensation, else
1842
1843	comm_FLUXTOP_DN(1:ngrid)=fluxtop_dn(1:ngrid)
1844	comm_FLUXABS_SW(1:ngrid)=fluxabs_sw(1:ngrid)
1845	comm_FLUXTOP_LW(1:ngrid)=fluxtop_lw(1:ngrid)
1846	comm_FLUXSURF_SW(1:ngrid)=fluxsurf_sw(1:ngrid)
1847	comm_FLUXSURF_LW(1:ngrid)=fluxsurf_lw(1:ngrid)
1848	comm_FLXGRD(1:ngrid)=fluxgrd(1:ngrid)
1849	sensibFlux(1:ngrid) = zflubid(1:ngrid) - capcal(1:ngrid)*zdtsdif(1:ngrid) !!! ????
1850	comm_HR_DYN(1:ngrid,1:nlayer) = zdtdyn(1:ngrid,1:nlayer)
1851
1852	! if (turb_resolved) then
1853	! open(17,file='lsf.txt',form='formatted',status='old')
1854	! rewind(17)
1855	! DO l=1,nlayer
1856	! read(17,*) lsf_dt(l),lsf_dq(l)
1857	! ENDDO
1858	! close(17)
1859	! do ig=1,ngrid
1860	! if ((tracer).and.(water)) then
1861	! pdq(ig,:,igcm_h2o_vap) = pdq(ig,:,igcm_h2o_vap) + lsf_dq(:)
1862	! endif
1863	! pdt(ig,:) = pdt(ig,:) + lsf_dt(:)
1864	! comm_HR_DYN(ig,:) = lsf_dt(:)
1865	! enddo
1866	! endif
1867	#endif
1868
1869	! XIOS outputs
1870	#ifdef CPP_XIOS
1871	! Send fields to XIOS: (NB these fields must also be defined as
1872	! <field id="..." /> in context_lmdz_physics.xml to be correctly used)
1873	CALL send_xios_field("ls",zls)
1874
1875	CALL send_xios_field("ps",ps)
1876	CALL send_xios_field("area",cell_area)
1877	CALL send_xios_field("p",pplay)
1878	CALL send_xios_field("temperature",zt)
1879	CALL send_xios_field("u",zu)
1880	CALL send_xios_field("v",zv)
1881	CALL send_xios_field("omega",omega)
1882
1883	! IF (calltherm) THEN !AF24: removed
1884	! IF (water) THEN !AF24: removed
1885
1886	CALL send_xios_field("ISR",fluxtop_dn)
1887	CALL send_xios_field("OLR",fluxtop_lw)
1888	CALL send_xios_field("ASR",fluxabs_sw)
1889
1890	if (specOLR .and. corrk) then
1891	call send_xios_field("OLR3D",OLR_nu)
1892	call send_xios_field("IR_Bandwidth",DWNI)
1893	call send_xios_field("VI_Bandwidth",DWNV)
1894	call send_xios_field("OSR3D",OSR_nu)
1895	call send_xios_field("GSR3D",GSR_nu)
1896	endif
1897
1898	if (lastcall.and.is_omp_master) then
1899	write(,) "physiq: call xios_context_finalize"
1900	call xios_context_finalize
1901	endif
1902	#endif
1903
1904	if (check_physics_outputs) then
1905	! Check the validity of updated fields at the end of the physics step
1906	call check_physics_fields("end of physiq:", zt, zu, zv, pplev, zq)
1907	endif
1908
1909	icount=icount+1
1910
1911	end subroutine physiq
1912
1913	end module physiq_mod

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