source: trunk/LMDZ.MARS/libf/phymars/xios_output_mod.F90 @ 2350

Last change on this file since 2350 was 2333, checked in by adelavois, 5 years ago

More outputs with xios from physics
physics is now able to transmit soil fields to xios
File size: 9.8 KB
Line 
1MODULE xios_output_mod
2
3 IMPLICIT NONE
4 
5 INTEGER,PRIVATE,SAVE :: time_it=0 ! store number of iterations with calls to XIOS since start
6! does not need to be threadprivate; managed by omp master
7
8 CHARACTER(LEN=*), PARAMETER :: context_id= "LMDZ" ! same as in context_lmdz_physics.xml
9 
10#ifdef CPP_XIOS
11
12 INTERFACE send_xios_field
13    MODULE PROCEDURE histwrite0d_xios,histwrite2d_xios,histwrite3d_xios
14 END INTERFACE
15 
16
17CONTAINS
18
19  SUBROUTINE initialize_xios_output(day,timeofday,dtphys,daysec,&
20                                    presnivs,pseudoalt,mlayer)
21  USE mod_phys_lmdz_para, ONLY: jj_nb, jj_begin, jj_end, ii_begin, ii_end, &
22                                mpi_size, mpi_rank, klon_mpi, &
23                                is_sequential, is_south_pole_dyn
24  USE mod_grid_phy_lmdz, ONLY: nbp_lon, nbp_lat, klon_glo, grid_type, unstructured
25  USE print_control_mod, ONLY: lunout, prt_level
26  USE mod_grid_phy_lmdz, ONLY: nbp_lon, nbp_lat
27  USE regular_lonlat_mod, ONLY: lon_reg, lat_reg
28  USE nrtype, ONLY: pi
29#ifdef CPP_XIOS
30  USE xios
31#endif
32  USE wxios, ONLY: wxios_domain_param, wxios_domain_param_unstructured, wxios_closedef
33  IMPLICIT NONE
34 
35  REAL,INTENT(IN) :: day ! Number of elapsed sols since reference Ls=0.
36  REAL,INTENT(IN) :: timeofday ! "Universal time", given as fraction of sol (e.g.: 0.5 for noon).
37  REAL,INTENT(IN) :: dtphys ! physics time step (s)
38  REAL,INTENT(IN) :: daysec ! lengthof a standard day (s)
39  REAL,INTENT(IN) :: presnivs(:) ! vertical grid approximate pressure (Pa)
40  REAL,INTENT(IN) :: pseudoalt(:) ! vertical grid approximate altitude (km)
41  REAL,INTENT(IN) :: mlayer(:) ! soil layer depth at intermediate level (m)
42 
43 
44  INTEGER :: data_ibegin, data_iend
45  TYPE(xios_duration) :: timestep
46  TYPE(xios_date) :: time_origin
47  TYPE(xios_date) :: start_date
48 
49!$OMP BARRIER
50!$OMP MASTER
51
52    ! 1. Declare available vertical axes to be used in output files:
53    IF (prt_level>=10) WRITE(lunout,*) "initialize_xios_output: call xios_set_axis_attr for presnivs"
54    CALL xios_set_axis_attr("presnivs", n_glo=size(presnivs), value=presnivs,&
55                            unit="Pa",positive="down")
56    IF (prt_level>=10) WRITE(lunout,*) "initialize_xios_output: call xios_set_axis_attr for altitude"
57    CALL xios_set_axis_attr("altitude", n_glo=size(pseudoalt), value=pseudoalt,&
58                            unit="km",positive="up")
59    IF (prt_level>=10) WRITE(lunout,*) "initialize_xios_output: call xios_set_axis_attr for soil"
60    CALL xios_set_axis_attr("soil_layers", n_glo=size(mlayer), value=mlayer,&
61                            unit="m",positive="down")
62   
63    ! 2. Declare horizontal domain
64    ! Set values for the mask:
65!    IF (mpi_rank == 0) THEN
66!        data_ibegin = 0
67!    ELSE
68!        data_ibegin = ii_begin - 1
69!    END IF
70
71!    IF (mpi_rank == mpi_size-1) THEN
72!        data_iend = nbp_lon
73!    ELSE
74!        data_iend = ii_end + 1
75!    END IF
76
77!    if (prt_level>=10) then
78!      write(lunout,*) "initialize_xios_output: mpirank=",mpi_rank," iibegin=",ii_begin , " ii_end=",ii_end," jjbegin=",jj_begin," jj_nb=",jj_nb," jj_end=",jj_end
79!      write(lunout,*) "initialize_xios_output: mpirank=",mpi_rank," nbp_lon=",nbp_lon," nbp_lat=",nbp_lat
80!      write(lunout,*) "initialize_xios_output: mpirank=",mpi_rank," data_ibegin=",data_ibegin," data_iend=",data_iend
81!      write(lunout,*) "initialize_xios_output: mpirank=",mpi_rank," data_ibegin=",data_ibegin," data_iend=",data_iend
82!      write(lunout,*) "initialize_xios_output: mpirank=",mpi_rank," is_south_pole=",is_south_pole_dyn
83!    endif
84
85!$OMP END MASTER
86!$OMP BARRIER
87    ! Initialize the XIOS domain coreesponding to this process:
88    if (prt_level>=10) write(lunout,*) "initialize_xios_output: call wxios_domain_param"
89!    CALL wxios_domain_param("dom_glo", is_sequential, nbp_lon, jj_nb, nbp_lon, nbp_lat, &
90!                            1, nbp_lon, ii_begin, ii_end, jj_begin, jj_end,             &
91!                            klon_mpi+2*(nbp_lon-1), data_ibegin, data_iend,             &
92!                            lat_reg*(180./pi), lon_reg*(180./pi),                       &
93!                            is_south_pole_dyn,mpi_rank)
94
95    IF (grid_type==unstructured) THEN
96      CALL wxios_domain_param_unstructured("dom_glo")
97    ELSE
98      CALL wxios_domain_param("dom_glo")
99    ENDIF
100
101!$OMP MASTER
102    ! 3. Declare calendar and time step
103    if (prt_level>=10) then
104     write(lunout,*) "initialize_xios_output: build calendar"
105    endif
106    timestep%second=dtphys
107    if (nint(dtphys).ne.dtphys) then
108      write(*,*) "initialize_xios_output: warning physics timestep is not an integer!"
109      timestep%second=nint(dtphys)
110    endif
111    if (nint(daysec).ne.daysec) then
112      write(*,*) "initialize_xios_output: warning day length is not an integer!"
113    endif
114    ! Important: do no operations involving dates and calendars
115    ! before defining the calendar!
116    CALL xios_define_calendar(type="user_defined", &
117                              timestep=timestep, &
118                              day_length=nint(daysec), &
119                              month_lengths=[61,66,66,65,60,54,50,46,47,47,51,56])
120    !NB: it would make more sense to define months and their length in the
121    ! xml files and not to have them hard coded here.... to be improved...
122   
123    ! time origin of the simulation (default: 1st year/1st month/1st day, Ls=0)
124    time_origin=xios_date(1,1,1,0,0,0)
125    CALL xios_set_time_origin(time_origin=time_origin)
126!    if (prt_level>=10) then
127     write(lunout,*) "initialize_xios_output: time_origin=",time_origin
128!    endif
129
130    ! Now define the start time of this simulation
131    ! NB: we substract dtphys because we want to set the origin of the time axis
132    start_date=time_origin+xios_duration(0,0,day,0,0,timeofday*daysec-dtphys)
133    call xios_set_start_date(start_date=start_date)
134    if (prt_level>=10) then
135     write(lunout,*) "initialize_xios_output: start_date=",start_date
136    endif
137
138    ! 4. Finalize the context:
139    if (prt_level>=10) write(*,*) "initialize_xios_output: call wxios_closedef"
140    CALL wxios_closedef()
141    if (prt_level>=10) write(*,*) "initialize_xios_output: after call wxios_closedef"
142
143!$OMP END MASTER
144!$OMP BARRIER
145 
146  END SUBROUTINE initialize_xios_output
147
148!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
149
150  SUBROUTINE finalize_xios_output
151  USE xios
152  IMPLICIT NONE
153!$OMP BARRIER   
154!$OMP MASTER
155    CALL xios_context_finalize
156!$OMP END MASTER   
157!$OMP BARRIER   
158 
159  END SUBROUTINE finalize_xios_output
160
161!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
162
163  SUBROUTINE update_xios_timestep
164  USE xios
165  IMPLICIT NONE
166    CALL set_xios_context
167!$OMP MASTER
168    time_it=time_it+1
169    CALL xios_update_calendar(time_it)
170!$OMP END MASTER   
171  END SUBROUTINE update_xios_timestep
172
173!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
174
175  SUBROUTINE set_xios_context
176  USE XIOS
177  IMPLICIT NONE
178    TYPE(xios_context) :: ctx_hdl
179
180!$OMP MASTER
181    CALL xios_get_handle(context_id,ctx_hdl)
182    CALL xios_set_current_context(ctx_hdl)
183!$OMP END MASTER   
184  END SUBROUTINE set_xios_context
185
186!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
187
188  SUBROUTINE histwrite0d_xios(field_name,field)
189  USE xios, ONLY: xios_send_field
190  USE print_control_mod, ONLY: prt_level, lunout
191  IMPLICIT NONE
192 
193    CHARACTER(LEN=*), INTENT(IN) :: field_name
194    REAL, INTENT(IN) :: field
195   
196    IF (prt_level >= 10) WRITE(lunout,*)'Begin histrwrite0d_xios ',trim(field_name)
197   
198!$OMP MASTER
199    CALL xios_send_field(field_name,field)
200!$OMP END MASTER
201   
202    IF (prt_level >= 10) WRITE(lunout,*)'End histrwrite0d_xios ',trim(field_name)
203   
204  END SUBROUTINE histwrite0d_xios
205
206!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
207
208  SUBROUTINE histwrite2d_xios(field_name,field)
209  USE dimphy, only: klon
210  USE mod_phys_lmdz_para, only: gather_omp, grid1Dto2D_mpi, &
211                                jj_nb, klon_mpi
212  USE xios, only: xios_send_field
213  USE print_control_mod, ONLY: prt_level, lunout
214  USE mod_grid_phy_lmdz, ONLY: nbp_lon
215  IMPLICIT NONE
216
217    CHARACTER(LEN=*), INTENT(IN) :: field_name
218    REAL, DIMENSION(:), INTENT(IN) :: field
219     
220    REAL,DIMENSION(klon_mpi) :: buffer_omp
221    REAL :: Field2d(nbp_lon,jj_nb)
222
223    IF (prt_level >= 10) WRITE(lunout,*)'Begin histrwrite2d_xios ',trim(field_name)
224
225    IF (SIZE(field)/=klon) CALL abort_physic('iophy::histwrite2d_xios','Field first DIMENSION not equal to klon',1)
226   
227    CALL Gather_omp(field,buffer_omp)   
228!$OMP MASTER
229    CALL grid1Dto2D_mpi(buffer_omp,Field2d)
230   
231    CALL xios_send_field(field_name, Field2d)
232!$OMP END MASTER   
233
234    IF (prt_level >= 10) WRITE(lunout,*)'End histrwrite2d_xios ',trim(field_name)
235  END SUBROUTINE histwrite2d_xios
236
237!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
238
239  SUBROUTINE histwrite3d_xios(field_name, field)
240  USE dimphy, only: klon, klev
241  USE mod_phys_lmdz_para, only: gather_omp, grid1Dto2D_mpi, &
242                                jj_nb, klon_mpi
243  USE xios, only: xios_send_field
244  USE print_control_mod, ONLY: prt_level,lunout
245  USE mod_grid_phy_lmdz, ONLY: nbp_lon
246
247  IMPLICIT NONE
248
249    CHARACTER(LEN=*), INTENT(IN) :: field_name
250    REAL, DIMENSION(:,:), INTENT(IN) :: field ! --> field(klon,:)
251
252    REAL,DIMENSION(klon_mpi,SIZE(field,2)) :: buffer_omp
253    REAL :: Field3d(nbp_lon,jj_nb,SIZE(field,2))
254    INTEGER :: ip, n, nlev
255
256  IF (prt_level >= 10) write(lunout,*)'Begin histrwrite3d_xios ',trim(field_name)
257
258    !Et on.... écrit
259    IF (SIZE(field,1)/=klon) CALL abort_physic('iophy::histwrite3d','Field first DIMENSION not equal to klon',1)
260    nlev=SIZE(field,2)
261
262
263    CALL Gather_omp(field,buffer_omp)
264!$OMP MASTER
265    CALL grid1Dto2D_mpi(buffer_omp,field3d)
266
267    CALL xios_send_field(field_name, Field3d(:,:,1:nlev))
268!$OMP END MASTER   
269
270    IF (prt_level >= 10) write(lunout,*)'End histrwrite3d_xios ',trim(field_name)
271  END SUBROUTINE histwrite3d_xios
272
273#endif
274
275END MODULE xios_output_mod
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