#!/bin/csh -f
# $Header: /users/lmdz/cvsroot/LMDZ.3.3/makegcm,v 1.21 2001/07/04 08:41:44 lmdz Exp $
#set verbose echo
########################################################################
# options par defaut pour la commande make
########################################################################
set dim="64x48x32"
set physique=std
set phys="PHYS=$physique"
set include='-I$(LIBF)/grid -I$(LIBF)/misc -I. -I$(LIBF)/dynlonlat_phylonlat'
set ntrac = 1
set filtre=filtrez
set grille=reg
set dyntype="dyn"
set bands="32x36"
set scatterers="1"
set full=""
#src_dirs: directories containing source files 
set src_dirs="grid misc" 

########################################################################
# path a changer contenant les sources et les objets du modele
########################################################################

#### If you want you can set environment variables here
# default LMDGCM is where the makegcm script is:
#setenv LMDGCM `pwd`"/"`dirname $0` # only works for relative paths
set scriptdir=`dirname $0`
setenv LMDGCM `readlink -f $scriptdir`
#setenv LMDGCM "/san/home/rdword/gcm/LMDZ.GENERIC"
setenv LIBOGCM $LMDGCM/libo
## NetCDF, what is below is OK on Gnome
if ( `hostname` == n201 ) then
    echo "GNOME cluster"
    setenv NCDFLIB /usr/local/lib
    setenv NCDFINC /usr/local/include
else if ( `hostname` == ciclad1.ipsl.jussieu.fr ) then
    echo "CICLAD cluster"
    setenv NCDFLIB /opt/netcdf/ifort/lib
    setenv NCDFINC /opt/netcdf/ifort/include
else
   # NetCDF, on LMD farm:
    echo "LMD machines"
    setenv NCDFLIB /donnees/emlmd/netcdf64-4.0.1_ifort/lib
    setenv NCDFINC /donnees/emlmd/netcdf64-4.0.1_ifort/include
endif

setenv localdir "`pwd`"
set MODIPSL=0
echo $localdir | grep modipsl >& /dev/null
if ( ! $status ) then
  set MODIPSL=1
  setenv LMDGCM $localdir
  cd ../..
  setenv LIBOGCM "`pwd`/lib"
  cd $localdir
  if ( `hostname` == rhodes ) then
    set NCDFINC=`grep sxnec ../../util/AA_make.gdef| grep NCDF_INC|sed -e "s/^.* =//"`
    set NCDFLIB=`grep sxnec ../../util/AA_make.gdef| grep NCDF_LIB|sed -e 's/^.* =//'`
  else
    if ( `hostname` == nymphea0 ) then
      set NCDFINC=`grep fjvpp ../../util/AA_make.gdef| grep NCDF_INC|sed -e "s/^.* =//"`
      set NCDFLIB=`grep fjvpp ../../util/AA_make.gdef| grep NCDF_LIB|sed -e 's/^.* =//'`
    else
      echo 'Probleme de definition des variables NCDFINC et NCDFLIB'
    endif 
  endif 
else
  if ( ! $?LMDGCM ) then
    echo You must initialize the variable LMDGCM in your environnement
    echo for instance: "setenv LMDGCM /usr/myself/supergcm" in .cshrc
    exit
  endif
  if ( ! $?LIBOGCM ) then
    set LIBOGCM=$LMDGCM/libo
  endif
  if ( ! $?NCDFLIB ) then
    echo You must initialize the variable NCDFLIB in your environnement
    echo for instance: "setenv NCDFLIB /usr/myself/netcdf" in .cshrc
    exit
  endif
  if ( ! $?NCDFINC ) then
    echo You must initialize the variable NCDFINC in your environnement
    echo for instance: "setenv NCDFINC /usr/myself/netcdf" in .cshrc
    exit
  endif
endif
set model=$LMDGCM
set libo=$LIBOGCM

########################################################################
#  Les differentes platformes reconnues
########################################################################

set HP=0
set IBM=0
set SUN=0
set VPP=0
set CRAY=0
set DEC=0
set LINUX=0
set NEC=0
set XNEC=0
if ( `uname` == HP-UX ) then
   set machine=HP
   set HP=1
else if (`uname` == UNIX_System_V ) then
   set machine=VPP
   set VPP=1
else if (`uname` == SunOS ) then
   set machine=SUN
   set SUN=1
else if ( `uname` == AIX ) then
   set machine=IBM
   set IBM=1
else if ( `uname` == OSF1 ) then
   set machine=ALPHA
   set DEC=1
else if ( `uname` == Linux ) then
   set machine=LINUX
   set LINUX=1
else if ( `hostname` == atlas || `hostname` == axis  || `hostname` == etoile ) then
   set machine=CRAY
   set CRAY=1
else if ( `uname` == SUPER-UX ) then
   set machine=NEC
   set NEC=1
else if ( `hostname` == rhodes) then
   set machine=XNEC
   set XNEC=1
else if ( `uname` == CYGWIN_NT-6.1-WOW64) then
   set machine=LINUX
   set LINUX=1
else
   echo Vous travaillez sur une machine non prevue par le reglement
   exit
endif

# create $libo directory if it doesn't exist
if ( ! -d $libo )  then
   mkdir $libo
endif

if $VPP then
set netcdf=netcdf_v
else 
set netcdf=netcdf
endif
########################################################################
#  Quelques initialisations de variables du shell.
########################################################################

set dyn=
set opt_link=""
set adjnt=""
set opt_dep=""

set optim90=""
set oplink=""

########################################################################
#  Optimisations par defaut suivant les machines
########################################################################

echo "Optimisations par defaut suivant les machines"
set libf=$model/libf
#setenv localdir "LOCAL_DIR=`pwd`"
#setenv localdir "`pwd`"
cd $model
if $CRAY then
   set optim90="-Wp'-P' -DCRAY "'-p$(LIBO) -eiv '
   set oplink="-Wl'-DSTACK=128 -f indef' -L$NCDFLIB -lnetcdf "
   set mod_loc_dir=" "
   set mod_suffix=" "
else if $SUN then
   set optim90=" -fast"
   set optimtru90=" -fast -free"
   set opt_link="-L$NCDFLIB -lnetcdf"
   set mod_loc_dir=$localdir
   set mod_suffix=mod
else if $HP then
else if $IBM then
else if $VPP then
   set optim90="$optim -X9 -w"
   if $COUPLE then
     set opt_link="-Wg,-c $IOIPSLDIR/liboasis2.4_mpi2.a /usr/lang/mpi2/lib64/libmpi.a /usr/lang/mpi2/lib64/libmp.a /usr/local/lib/lib64/libnetcdf_cc.a -L$IOIPSLDIR -lioipsl"
     set oplink="-Wl,-t,-P,-dy "
   else
     set opt_link="-Wg,-c /usr/local/lib/lib64/libnetcdf_cc.a -L$IOIPSLDIR -lioipsl"
     set oplink="-Wl,-t,-dy "
   endif
   set mod_loc_dir=$IOIPSLDIR
   set mod_suffix=mod
else if $DEC then
else if $LINUX then
   #NB: on gnome -O3 ==> NaNs ...
   set optim=" -O2 -fp-model precise -ip -mkl=sequential -align all "
   set optim90=" -O2 -fp-model precise -ip -mkl=sequential -align all "
   set optimtru90=" -O2 -fp-model precise -ip -mkl=sequential -align all "
   if ( `hostname` == ciclad1.ipsl.jussieu.fr ) then
       echo "YOU ARE ON CICLAD CLUSTER"
       set opt_link=" -L$NCDFLIB -lnetcdf"  # this is necessary on ciclad
   endif
   set mod_loc_dir=$LIBOGCM
   set mod_suffix=mod
else if $NEC then
   set optim90=' -clear -C hopt -float0 -ew -P static -Wf,"-pvctl fullmsg noassume "'
   set optimtru90=' -clear -f4 -C hopt -float0 -ew -P static -Wf,"-pvctl fullmsg noassume "'
###   set opt_link=" -C hopt -float0 -ew -P static -L$IOIPSLDIR -lioipsl  -L/u/rech/psl/rpsl003/IOIPSL -lnetcdf_i8r8_v "
   set opt_link=" -C hopt -float0 -ew -P static -L/SX/usr/local/lib  -lnetcdf_i8r8 "
   set mod_loc_dir="."
   set mod_suffix="mod"
else if $XNEC then
   set optim90=' -clear -R5 -C vopt -float0 -ew -P static -Wf,"-pvctl loopcnt=40000 fullmsg noassume "'
   set optimtru90=' -clear -R5 -f4 -C vopt -float0 -ew -P static -Wf,"-pvctl loopcnt=40000 fullmsg noassume "'
   if $MODIPSL then
     if $COUPLE then
       set opt_link="-L$IOIPSLDIR -lsxioipsl -loasis2.4_mpi2 -float0 -ew -P static -I$NCDFINC $NCDFLIB "
     else
       set opt_link="-L$IOIPSLDIR -lsxioipsl -float0 -ew -P static -I$NCDFINC $NCDFLIB "
     endif
     set mod_loc_dir="./"
   else
     set opt_link=" -C hopt -float0 -ew -P static -I$NCDFINC -L/SX/usr/local/lib -lnetcdf_i8r8"
     set mod_loc_dir="."
   endif
   set mod_suffix="mod"

endif

set nomlib=${machine}

# Impose distinct name for 64 bit Linux machines (to avoid mixing 32 and 64)
if (`uname` == Linux && `uname -m` == "x86_64") then
  set nomlib=${machine}64
endif

########################################################################
# lecture des options de mymake
########################################################################

top:
if ($#argv > 0) then
    switch ($1:q)

    case -h:

########################################################################
# Manuel en ligne
########################################################################
more <<eod


makegcm [Options] prog


The makegcm script:
-------------------

1. compiles a series of subroutines located in the $LMDGCM/libf
 sub-directories.
 The objects are then stored in the libraries in $LIBOGCM.

2. then, makegcm compiles program prog.f located by default in
$LMDGCM/libf/dyn3d and makes the link with the libraries.

Environment Variables '$LMDGCM' and '$LIBOGCM'
 must be set as environment variables or directly
 in the makegcm file.

The makegcm command is used to control the different versions of the model
 in parallel, compiled using the compilation options 
 and the various dimensions, without having to recompile the whole model.

The FORTRAN libraries are stored in directory $LIBOGCM.


OPTIONS:
--------

The following options can either be defined by default by editing the
makegcm "script", or in interactive mode:

-d imxjmxlm  where im, jm, and lm are the number of longitudes,
             latitudes and vertical layers respectively.

-s nscat   Number of radiatively active scatterers

-p PHYS    Selects the set of physical parameterizations
           you want to compile the model with.
           The model is then compiled using the physical
           parameterization sources in directory:
            $LMDGCM/libf/phyPHYS

-g grille  Selects the grid type.
           This option overwrites file
           $LMDGCM/libf/grid/fxyprim.h
           with file
           $LMDGCM/libf/grid/fxy_grille.h
           the grid can take the following values:
           1. reg - the regular grid
           2. sin - to obtain equidistant points in terms of sin(latitude)
           3. new - to zoom into a part of the globe

-O "compilation options" set of fortran compilation options to use

-include path
           Used if the subroutines contain #include files (ccp) that 
           are located in directories that are not referenced by default.

-adjnt     Compiles the adjoint model to the dynamical code.

-olddyn    To compile GCM with "old dynamics"

-filtre  filter
           To select the longitudinal filter in the polar regions.
           "filter" corresponds to the name of a directory located in
           $LMDGCM/libf. The standard filter for the model is "filtrez"
           which can be used for a regular grid and for a  
           grid with longitudinal zoom.

-link "-Ldir1 -lfile1 -Ldir2 -lfile2 ..."
           Adds a link to FORTRAN libraries
           libfile1.a, libfile2.a ... 
           located in directories dir1, dir2 ...respectively
           If dirn is a directory with an automatic path 
           (/usr/lib ... for example) 
           there is no need to specify  -Ldirn.

-full      Full (re)compilation (from scratch)

eod
exit

########################################################################
# Lecture des differentes options
########################################################################

    case -d
        set dim=$2 ; shift ; shift ; goto top
                        
    case -O:
        set optim90="$2" ; set optim="$2" ; set optimtru90="$2" ; shift ; shift ; goto top

     case -p
        set physique="$2" ; set phys="PHYS=$physique" ; shift ; shift ; goto top

     case -s
        set scatterers="$2" ; shift ; goto top

     case -g
        set grille="$2" ; shift ; shift ; goto top

    case -b
        set bands=$2 ; shift ; shift ; goto top
           
     case -t
        set ntrac=$2 ; shift ; shift ; goto top

     case -include
        set include="$include -I$2" ; shift ; shift ; goto top

     case -adjnt
        set opt_dep="$opt_dep adjnt" ; set adjnt="-ladjnt -ldyn3d "

     case -olddyn
        set dyntype="olddyn" ; shift; goto top

     case -full
        set full="full" ; shift ; goto top

     case -filtre
        set filtre=$2 ; shift ; shift ; goto top

     case -link
        set opt_link="$opt_link $2" ; shift ; shift ; goto top

     case -debug
        if $HP then
           set optim90=" -g "
        else if $SUN then
           setenv PARALLEL 4
           set optim90=" -g -C "
           set optimtru90=" -g -C "
        else if $CRAY then
           set optim90="$optim90"" -G1 "
        else if $LINUX then
	   set optim=" -g -fpe-all=0 -traceback -ftrapuv -fp-stack-check -check all -debug"
           set optim90=" -g -fpe-all=0 -traceback -ftrapuv -fp-stack-check -check all -debug"
           set optimtru90=" -g -fpe-all=0 -traceback -ftrapuv -fp-stack-check -check all -debug"
        else 
           echo "pas d option debug predefinie pour cette machine"
           exit
        endif
        shift ; goto top

     default
        set code="$1" ; shift ; goto top

   endsw
endif


echo "apres les opts dim $dim"

########################################################################
# cas special sans physique
########################################################################
if ( "$physique" == 'nophys' ) then
   set phys="L_PHY= LIBPHY="
else
   set src_dirs="$src_dirs phy$physique"
   set include="$include "' -I$(LIBF)/phy'"$physique"
endif
set libdyn_phy=""
set LIBDYN_PHYS=""
########################################################################
#subtilites sur le nom de la librairie
########################################################################


\rm tmp ; touch tmp
\rm tmp90 ; touch tmp90
foreach i ( $optim90 )
   echo $i | sed -e 's/\"//g' -e "s/\'//g" -e 's/-//g' -e 's/://g' -e 's/=//g' -e 's/%//g' >> tmp
end
set suf=
foreach i ( `sort tmp | uniq ` )
   set suf=$suf$i
end
if ( ! $IBM ) then
   set nomlib="$nomlib$suf"
endif
if ( $DEC ) then
   set nomlib=DEC
endif

# dimension
echo "dimension avant sed $dim"
if ( $IBM ) then
   set dim=`echo $dim | sed -en 's/[^0-9]/ /g'`
   set dim_=`echo $dim | sed -en 's/[^0-9]/_/g'`
else if ( $SUN || $XNEC ) then
   set dim=`echo $dim | sed -e 's/[^0-9]/ /g'` 
   set dim_=`echo $dim | sed -e 's/[^0-9]/_/g'`
else
     set dim=`echo $dim | sed -e 's/[^0-9]/ /g'`
     set dim_=`echo $dim | sed -e 's/[^0-9]/_/g'`
endif

# bands
echo "bands avant sed $bands"
if ( $IBM ) then
   set bands=`echo $bands | sed -en 's/[^0-9]/ /g'`
   set bands_=`echo $bands | sed -en 's/[^0-9]/_/g'`
else if ( $SUN || $XNEC ) then
   set bands=`echo $bands | sed -e 's/[^0-9]/ /g'` 
   set bands_=`echo $bands | sed -e 's/[^0-9]/_/g'`
else
     set bands=`echo $bands | sed -e 's/[^0-9]/ /g'`
     set bands_=`echo $bands | sed -e 's/[^0-9]/_/g'`
endif


# build final name of libraries directory:
if ( "$dyntype" == "olddyn" ) then
  set nomlib=${nomlib}_${dim_}_t${ntrac}_s${scatterers}_${grille}_olddyn
else
  set nomlib=${nomlib}_${dim_}_t${ntrac}_s${scatterers}_${grille}
endif

# Append number of bands to nomlib (new for universal model)
set nomlib=${nomlib}_${bands_}

# Append 'physique' type, if it is not mars, to nomlib
if ( "$physique" != "mars" ) then
  set nomlib=${nomlib}_${physique}
endif

## M-A-F nomlib trop long sur CRAY pour ar
if ( $CRAY ) then
    set nomlib=F90_${dim_}_t${ntrac}
endif
if ( $NEC || $XNEC ) then
    set nomlib=F90_${dim_}_t${ntrac}
endif

echo "calcul de la dimension"
set dimc=`echo $dim | wc -w`

if ( "$dimc" == "2" ) then
  set include="$include "'-I$(LIBF)/dyn2d '
  set dimh=$dim
endif
if ( "$dimc" == "3" ) then
  if ( "$dyntype" == "olddyn" ) then
    set include="$include "'-I$(LIBF)/olddyn3d '
    set src_dirs="$src_dirs olddyn3d dynlonlat_phylonlat dynlonlat_phylonlat/phy$physique"
  else
    set include="$include "'-I$(LIBF)/dyn3d '
    set src_dirs="$src_dirs dyn3d dynlonlat_phylonlat dynlonlat_phylonlat/phy$physique"
  endif
  set libdyn_phy="-ldynlonlat_phylonlat"
  set LIBDYN_PHYS='$(LIBO)/libdynlonlat_phylonlat.a'
  set dimh=`echo $dim | awk ' { print $1 "." $2 } '`
endif
echo "dimc is $dimc"

########################################################################
# path pour les #include
########################################################################

set include="$include -I$NCDFINC "
echo $include

########################################################################
# Gestion des dimensions du modele.
# on cree ou remplace le fichier des dimensions/nombre de traceur
########################################################################

cd $libf/grid
if ( -f dimensions.h ) then
  echo "WARNING: you are already compiling the model somewhere else"
  echo "Wait until the first compilation is finished before starting."
  echo "If you are sure that you are not compiling elsewhere, you can"
  echo "type [yes] to continue."
  echo "Do you want to continue?"
  if ( $< == "yes" ) then
    #remove old dimensions.h , bands.h and scatterers.h files
    \rm -f $libf/grid/dimensions.h
    \rm -f $libf/grid/bands.h
    \rm -f $libf/phy${physique}/bands.h
    \rm -f $libf/phy${physique}/scatterers.h
  else
    exit
  endif
endif

# Build the appropriate 'dimensions.h' file
cd dimension
./makdim $dim
# echo contents of dimensions.h to standard output
cat $libf/grid/dimensions.h

# Build the appropriate 'bands.h' file
cd $libf/phy$physique/bands
./makbands $bands
# echo contents of bands.h to standard output
cat $libf/phy$physique/bands.h

# Build the appropriate 'scatterers.h' file
cd $libf/phy$physique/scatterers
./make_scatterers $scatterers
# echo contents of scatterers.h to standard output
cat $libf/phy$physique/scatterers.h

cd $LMDGCM
# set path to objects directory
set libo=$libo/$nomlib
# create objects directory, if it doesn't exist
if ( ! -d $libo )  then
   mkdir $libo
   cd $model
endif

########################################################################
# Differentes dynamiques (3d, 2d, 1d)
########################################################################

set dimension=`echo $dim | wc -w`
echo dimension $dimension dim $dim
if ( $dimension == 1 ) then
  echo "No dynamics"
##  set dyn="L_DYN= DYN= L_FILTRE= "
## NB: we still need to have L_DYN=libdyn3d to reach routines and module
## objects which are located in dyn3d
  set dyntype=""
  set filtre="L_DYN= DYN= FILTRE= L_FILTRE= "
  set dyn="L_DYN= DYN= L_FILTRE= "
  set dirmain="phy$physique/dyn1d"
  set src_dirs="$src_dirs phy$physique/dyn1d "
  set include="$include "' -I$(LIBF)/phy'"$physique"'/dyn1d'
endif
endif

cd $model
if ( $dimension == 3 ) then
  cd libf/grid
  \rm fxyprim.h
  cp -p fxy_${grille}.h fxyprim.h
endif

######################################################################
# Gestion du filtre qui n'existe qu'en 3d.
######################################################################

# set filtre to 'oldfiltrez' if using -olddyn option
if ( "$dyntype" == "olddyn" ) then
  set filtre="oldfiltrez"
endif

if ( `expr $dimc \> 2` == 1 ) then
   set filtre="FILTRE=$filtre"
   if ( "$dyntype" == "olddyn" ) then
     set src_dirs="$src_dirs oldfiltrez"
   else
     set src_dirs="$src_dirs filtrez"
   endif
else
   set filtre="FILTRE= L_FILTRE= L_DYN= "
endif
echo "MACRO FILTRE $filtre"

echo "dimc $dimc"

#cleanup for a full recompilation, if requested
if ("$full" == "full") then
# remove makefile and $libo
  cd $model
  \rm -f makefile
  \rm -rf $libo/*
endif

########################################################################
#  Avant de lancer le make, on recree le makefile si necessaire
########################################################################
# c'est a dire dans 3 cas:
# 1. si la liste des fichiers .F et .h a ete modifiee depuis la
#    derniere creation du makefile
# 2. si le fichier contenant cette liste "liste_des_sources"
#    n'existe pas.
# 3. Si le makefile n'existe pas.
########################################################################

cd $model
find libf -name '*.[Fh]' -print | sort >! tmp77
#find libf -name '*.[Fh]' -exec egrep -i " *use *ioipsl" {} \; -print >! tmp90
find libf -name '*.[Fh]90' -print | sort >> tmp90

if (    `diff tmp77 liste_des_sources_f77 | wc -w` \
     || `diff tmp90 liste_des_sources_f90 | wc -w` \
     || ! -f makefile \
     || ! -f liste_des_sources_f90 \
     || ! -f liste_des_sources_f77 ) then
        echo "les fichiers suivants ont ete crees ou detruits"
        echo "ou les fichiers suivants sont passes ou ne sont plus en Fortran 90"
        diff liste_des_sources_f77 tmp77
        diff liste_des_sources_f90 tmp90
        \cp tmp77 liste_des_sources_f77
        \cp tmp90 liste_des_sources_f90
        echo "Remaking the makefile!"
        echo "src_dirs: $src_dirs"
        create_make_gcm $src_dirs >! tmp
        \mv tmp makefile
        echo "New makefile created."
endif

########################################################################
#  Execution de la comande make
########################################################################


echo PHYSIQUE $phys
echo dynamique $dyn $dimension
echo OPTIM90="$optim90" $filtre LIBO=$libo $dyn PHYS=$phys DIM=$dimc PROG=$code
echo PATH pour les fichiers INCLUDE $include
echo OPLINK="$oplink"

if $HP then
   set f77='fort77 +OP'
   set f90='jensaisrien'
   set opt_link="$opt_link -lm"
else  if $VPP then
   set f77=frt
   set f90=$f77
else if $CRAY then
   set f77=f90
   set f90=f90
else if $LINUX then
   set f77=ifort
   set f90=ifort
#### uncomment for double precision
#   set f77="ifort -real-size 64 -DNC_DOUBLE"
#   set f90="ifort -real-size 64 -DNC_DOUBLE"
   set opt_link=" -L$LIBOGCM -L$NCDFLIB -lnetcdf "
else if $SUN then
   set f77=f90
   set f90=f90
else if $NEC then
   set f77=f90
   set f90=f90
else if $XNEC then
   set f77=sxmpif90
   set f90=sxmpif90
else
   set f77=f77
   set f90=f90
endif

cd $model

if $VPP then
  set make="gmake RANLIB=ls"
else if $CRAY then
  set make="make RANLIB=ls"
else if $NEC then
  set make="make RANLIB=ls"
else if $LINUX then
  set make="make -k RANLIB=ranlib"
else if $XNEC then
  set make="/usr/local/bin/gmake RANLIB=ls"
  set make="/usr/freeware/bin/gmake RANLIB=ls"
else
  set make="make RANLIB=ranlib"
endif

#
# etat0_netcdf a besoin d'info de la physique
# A revoir
set include="$include"" -I$libf/phy$physique"


#################################################################
# Execution de la comande make... ENFIN!
#################################################################

if $VPP then
  set optim90=" $optim90 -Am -M$libo"
  set optimtru90="$optim90"
else if $SUN then
 set optim90=" $optim90 -M$libo"
 set optimtru90=" $optimtru90 "
else if $NEC then
 set optim90=" $optim90 -I$libo "
else if $XNEC then
 set optim90=" $optim90 -I$libo "
 set optimtru90=" $optimtru90 -I$libo "
else if $LINUX then
 set optim="$optim -module $libo"
 set optim90="$optim90 -module $libo"
 set optimtru90="$optimtru90 -module $libo"
# Ehouarn: remove set mod_loc_dir def below; mod_loc_dir=$localdir (set above)
# set mod_loc_dir=$libo
endif

set link="$f90 $optim90"

set ar=ar

if $XNEC then
  set link="sxld $opt_link"
  set link="$f90 "
#  set ar=sxar
endif

cd $localdir

set source_code=${code}.F
# handle cases when the main program is in the physics directory
set dirmain=dyn${dimc}d
if ( -f $LMDGCM/libf/dyn3d/${code}.F90 ) then
  set source_code=${code}.F90
endif
if ( -f $LMDGCM/libf/phy${physique}/dyn1d/${code}.F ) then
  set dirmain=phy${physique}/dyn1d
  set source_code=${code}.F
endif
if ( -f $LMDGCM/libf/phy${physique}/dyn1d/${code}.F90 ) then
  set dirmain=phy${physique}/dyn1d
  set source_code=${code}.F90
endif
if ( -f $LMDGCM/libf/dynlonlat_phylonlat/phy${physique}/${code}.F ) then
  set dirmain=dynlonlat_phylonlat/phy${physique}
  set source_code=${code}.F
endif
if ( -f $LMDGCM/libf/dynlonlat_phylonlat/phy${physique}/${code}.F90 ) then
  set dirmain=dynlonlat_phylonlat/phy${physique}
  set source_code=${code}.F90
endif

echo $make -f $LMDGCM/makefile \
OPTION_DEP="$opt_dep" OPTION_LINK="$opt_link" \
OPTIM="$optim" \
OPTIM90="$optim90" \
OPTIMTRU90="$optimtru90" \
INCLUDE="$include" \
$filtre \
LIBO=$libo \
$phys \
LIBDYN_PHYS=${LIBDYN_PHYS} \
DIM=$dimc \
DYNTYPE="$dyntype" \
L_DYN_PHY="$libdyn_phy" \
L_ADJNT="$adjnt" \
LOCAL_DIR="$localdir"  \
F77="$f77" \
F90="$f90" \
OPLINK="$oplink" \
LINK="$link" \
GCM="$LMDGCM" \
MOD_LOC_DIR=$mod_loc_dir \
MOD_SUFFIX=$mod_suffix \
AR=$ar \
DIRMAIN=$dirmain \
SOURCE=$source_code \
PROG=$code


$make -f $LMDGCM/makefile \
OPTION_DEP="$opt_dep" OPTION_LINK="$opt_link" \
OPTIM="$optim" \
OPTIM90="$optim90" \
OPTIMTRU90="$optimtru90" \
INCLUDE="$include" \
$filtre \
LIBO=$libo \
$phys \
LIBDYN_PHYS=${LIBDYN_PHYS} \
DIM=$dimc \
DYNTYPE="$dyntype" \
L_DYN_PHY="$libdyn_phy" \
L_ADJNT="$adjnt" \
LOCAL_DIR="$localdir"  \
F77="$f77" \
F90="$f90" \
OPLINK="$oplink" \
LINK="$link" \
GCM="$LMDGCM" \
MOD_LOC_DIR=$mod_loc_dir \
MOD_SUFFIX=$mod_suffix \
AR=$ar \
DIRMAIN=$dirmain \
SOURCE=$source_code \
PROG=$code

\rm -f $libf/grid/dimensions.h
\rm -f $libf/grid/bands.h
\rm -f $libf/phy$physique/bands.h
\rm -f $libf/phy$physique/scatterers.h