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physiq_mod.F90 @ 1677

Last change on this file since 1677 was 1669, checked in by emillour, 9 years ago

Generic GCM:
Added possibility to run without a startfi.nc file (mainly usefull for
tests with coupling with dynamico dynamical core):

added flag "startphy_file" flag (.false. if doing an "academic" start on the physics side).
turned phyetat0.F90 into module phyetat0_mod.F90
turned tabfi.F into module tabfi_mod.F90 and added handling of startphy_file==.false. case
extra initializations in physiq_mod for startphy_file==.false. case.

Property svn:executable set to *

File size: 93.7 KB

Line
1	module physiq_mod
2
3	implicit none
4
5	contains
6
7	subroutine physiq(ngrid,nlayer,nq, &
8	nametrac, &
9	firstcall,lastcall, &
10	pday,ptime,ptimestep, &
11	pplev,pplay,pphi, &
12	pu,pv,pt,pq, &
13	flxw, &
14	pdu,pdv,pdt,pdq,pdpsrf)
15
16	use radinc_h, only : L_NSPECTI,L_NSPECTV,naerkind
17	use watercommon_h, only : RLVTT, Psat_water,epsi
18	use gases_h, only: gnom, gfrac
19	use radcommon_h, only: sigma, glat, grav, BWNV
20	use radii_mod, only: h2o_reffrad, co2_reffrad
21	use aerosol_mod, only: iaero_co2, iaero_h2o
22	use surfdat_h, only: phisfi, zmea, zstd, zsig, zgam, zthe, &
23	dryness, watercaptag
24	use comdiurn_h, only: coslat, sinlat, coslon, sinlon
25	use comsaison_h, only: mu0, fract, dist_star, declin, right_ascen
26	use comsoil_h, only: nsoilmx, layer, mlayer, inertiedat
27	use geometry_mod, only: latitude, longitude, cell_area
28	USE comgeomfi_h, only: totarea, totarea_planet
29	USE tracer_h, only: noms, mmol, radius, rho_q, qext, &
30	alpha_lift, alpha_devil, qextrhor, &
31	igcm_h2o_ice, igcm_h2o_vap, igcm_dustbin, &
32	igcm_co2_ice
33	use time_phylmdz_mod, only: ecritphy, iphysiq, nday
34	use phyetat0_mod, only: phyetat0
35	use phyredem, only: physdem0, physdem1
36	use slab_ice_h, only: capcalocean, capcalseaice,capcalsno, &
37	noceanmx
38	use ocean_slab_mod, only :ocean_slab_init, ocean_slab_ice, &
39	ini_surf_heat_transp_mod, &
40	ocean_slab_get_vars,ocean_slab_final
41	use surf_heat_transp_mod,only :init_masquv
42	use planetwide_mod, only: planetwide_minval,planetwide_maxval,planetwide_sumval
43	use mod_phys_lmdz_para, only : is_master
44	use planete_mod, only: apoastr, periastr, year_day, peri_day, &
45	obliquit, nres, z0
46	use comcstfi_mod, only: pi, g, rcp, r, rad, mugaz, cpp
47	use time_phylmdz_mod, only: daysec
48	use callkeys_mod
49	use vertical_layers_mod, only: presnivs, pseudoalt
50	#ifdef CPP_XIOS
51	use xios_output_mod, only: initialize_xios_output, &
52	update_xios_timestep, &
53	send_xios_field
54	#endif
55	implicit none
56
57
58	!==================================================================
59	!
60	! Purpose
61	! -------
62	! Central subroutine for all the physics parameterisations in the
63	! universal model. Originally adapted from the Mars LMDZ model.
64	!
65	! The model can be run without or with tracer transport
66	! depending on the value of "tracer" in file "callphys.def".
67	!
68	!
69	! It includes:
70	!
71	! I. Initialization :
72	! I.1 Firstcall initializations.
73	! I.2 Initialization for every call to physiq.
74	!
75	! II. Compute radiative transfer tendencies (longwave and shortwave) :
76	! II.a Option 1 : Call correlated-k radiative transfer scheme.
77	! II.b Option 2 : Call Newtonian cooling scheme.
78	! II.c Option 3 : Atmosphere has no radiative effect.
79	!
80	! III. Vertical diffusion (turbulent mixing) :
81	!
82	! IV. Dry Convective adjustment :
83	!
84	! V. Condensation and sublimation of gases (currently just CO2).
85	!
86	! VI. Tracers
87	! VI.1. Water and water ice.
88	! VI.2. Aerosols and particles.
89	! VI.3. Updates (pressure variations, surface budget).
90	! VI.4. Slab Ocean.
91	! VI.5. Surface Tracer Update.
92	!
93	! VII. Surface and sub-surface soil temperature.
94	!
95	! VIII. Perform diagnostics and write output files.
96	!
97	!
98	! arguments
99	! ---------
100	!
101	! INPUT
102	! -----
103	!
104	! ngrid Size of the horizontal grid.
105	! nlayer Number of vertical layers.
106	! nq Number of advected fields.
107	! nametrac Name of corresponding advected fields.
108	!
109	! firstcall True at the first call.
110	! lastcall True at the last call.
111	!
112	! pday Number of days counted from the North. Spring equinoxe.
113	! ptime Universal time (0<ptime<1): ptime=0.5 at 12:00 UT.
114	! ptimestep timestep (s).
115	!
116	! pplay(ngrid,nlayer) Pressure at the middle of the layers (Pa).
117	! pplev(ngrid,nlayer+1) Intermediate pressure levels (Pa).
118	! pphi(ngrid,nlayer) Geopotential at the middle of the layers (m2.s-2).
119	!
120	! pu(ngrid,nlayer) u, zonal component of the wind (ms-1).
121	! pv(ngrid,nlayer) v, meridional component of the wind (ms-1).
122	!
123	! pt(ngrid,nlayer) Temperature (K).
124	!
125	! pq(ngrid,nlayer,nq) Advected fields.
126	!
127	! pudyn(ngrid,nlayer) \
128	! pvdyn(ngrid,nlayer) \ Dynamical temporal derivative for the
129	! ptdyn(ngrid,nlayer) / corresponding variables.
130	! pqdyn(ngrid,nlayer,nq) /
131	! flxw(ngrid,nlayer) vertical mass flux (kg/s) at layer lower boundary
132	!
133	! OUTPUT
134	! ------
135	!
136	! pdu(ngrid,nlayer) \
137	! pdv(ngrid,nlayer) \ Temporal derivative of the corresponding
138	! pdt(ngrid,nlayer) / variables due to physical processes.
139	! pdq(ngrid,nlayer) /
140	! pdpsrf(ngrid) /
141	!
142	!
143	! Authors
144	! -------
145	! Frederic Hourdin 15/10/93
146	! Francois Forget 1994
147	! Christophe Hourdin 02/1997
148	! Subroutine completely rewritten by F. Forget (01/2000)
149	! Water ice clouds: Franck Montmessin (update 06/2003)
150	! Radiatively active tracers: J.-B. Madeleine (10/2008-06/2009)
151	! New correlated-k radiative scheme: R. Wordsworth (2009)
152	! Many specifically Martian subroutines removed: R. Wordsworth (2009)
153	! Improved water cycle: R. Wordsworth / B. Charnay (2010)
154	! To F90: R. Wordsworth (2010)
155	! New turbulent diffusion scheme: J. Leconte (2012)
156	! Loops converted to F90 matrix format: J. Leconte (2012)
157	! No more ngridmx/nqmx, F90 commons and adaptation to parallel: A. Spiga (2012)
158	! Purge of the code : M. Turbet (2015)
159	!==================================================================
160
161
162	! 0. Declarations :
163	! ------------------
164
165	include "netcdf.inc"
166
167	! Arguments :
168	! -----------
169
170	! INPUTS:
171	! -------
172
173	integer,intent(in) :: ngrid ! Number of atmospheric columns.
174	integer,intent(in) :: nlayer ! Number of atmospheric layers.
175	integer,intent(in) :: nq ! Number of tracers.
176	character*20,intent(in) :: nametrac(nq) ! Names of the tracers taken from dynamics.
177
178	logical,intent(in) :: firstcall ! Signals first call to physics.
179	logical,intent(in) :: lastcall ! Signals last call to physics.
180
181	real,intent(in) :: pday ! Number of elapsed sols since reference Ls=0.
182	real,intent(in) :: ptime ! "Universal time", given as fraction of sol (e.g.: 0.5 for noon).
183	real,intent(in) :: ptimestep ! Physics timestep (s).
184	real,intent(in) :: pplev(ngrid,nlayer+1) ! Inter-layer pressure (Pa).
185	real,intent(in) :: pplay(ngrid,nlayer) ! Mid-layer pressure (Pa).
186	real,intent(in) :: pphi(ngrid,nlayer) ! Geopotential at mid-layer (m2s-2).
187	real,intent(in) :: pu(ngrid,nlayer) ! Zonal wind component (m/s).
188	real,intent(in) :: pv(ngrid,nlayer) ! Meridional wind component (m/s).
189	real,intent(in) :: pt(ngrid,nlayer) ! Temperature (K).
190	real,intent(in) :: pq(ngrid,nlayer,nq) ! Tracers (kg/kg_of_air).
191	real,intent(in) :: flxw(ngrid,nlayer) ! Vertical mass flux (ks/s) at lower boundary of layer
192
193	! OUTPUTS:
194	! --------
195
196	! Physical tendencies :
197
198	real,intent(out) :: pdu(ngrid,nlayer) ! Zonal wind tendencies (m/s/s).
199	real,intent(out) :: pdv(ngrid,nlayer) ! Meridional wind tendencies (m/s/s).
200	real,intent(out) :: pdt(ngrid,nlayer) ! Temperature tendencies (K/s).
201	real,intent(out) :: pdq(ngrid,nlayer,nq) ! Tracer tendencies (kg/kg_of_air/s).
202	real,intent(out) :: pdpsrf(ngrid) ! Surface pressure tendency (Pa/s).
203
204	! Local saved variables:
205	! ----------------------
206
207	integer,save :: day_ini ! Initial date of the run (sol since Ls=0).
208	integer,save :: icount ! Counter of calls to physiq during the run.
209	!$OMP THREADPRIVATE(day_ini,icount)
210
211	real, dimension(:),allocatable,save :: tsurf ! Surface temperature (K).
212	real, dimension(:,:),allocatable,save :: tsoil ! Sub-surface temperatures (K).
213	real, dimension(:,:),allocatable,save :: albedo ! Surface Spectral albedo. By MT2015.
214	real, dimension(:),allocatable,save :: albedo_equivalent ! Spectral Mean albedo.
215	real, dimension(:),allocatable,save :: albedo_snow_SPECTV ! Snow Spectral albedo.
216	real, dimension(:),allocatable,save :: albedo_co2_ice_SPECTV ! CO2 ice Spectral albedo.
217
218	!$OMP THREADPRIVATE(tsurf,tsoil,albedo,albedo_equivalent,albedo_snow_SPECTV,albedo_co2_ice_SPECTV)
219
220	real,dimension(:),allocatable,save :: albedo_bareground ! Bare Ground Albedo. By MT 2015.
221	real,dimension(:),allocatable,save :: rnat ! Defines the type of the grid (ocean,continent,...). By BC.
222
223	!$OMP THREADPRIVATE(albedo_bareground,rnat)
224
225	real,dimension(:),allocatable,save :: emis ! Thermal IR surface emissivity.
226	real,dimension(:,:),allocatable,save :: dtrad ! Net atmospheric radiative heating rate (K.s-1).
227	real,dimension(:),allocatable,save :: fluxrad_sky ! Radiative flux from sky absorbed by surface (W.m-2).
228	real,dimension(:),allocatable,save :: fluxrad ! Net radiative surface flux (W.m-2).
229	real,dimension(:),allocatable,save :: capcal ! Surface heat capacity (J m-2 K-1).
230	real,dimension(:),allocatable,save :: fluxgrd ! Surface conduction flux (W.m-2).
231	real,dimension(:,:),allocatable,save :: qsurf ! Tracer on surface (e.g. kg.m-2).
232	real,dimension(:,:),allocatable,save :: q2 ! Turbulent Kinetic Energy.
233
234	!$OMP THREADPRIVATE(emis,dtrad,fluxrad_sky,fluxrad,capcal,fluxgrd,qsurf,q2)
235
236
237	! Local variables :
238	! -----------------
239
240	! Aerosol (dust or ice) extinction optical depth at reference wavelength
241	! for the "naerkind" optically active aerosols:
242
243	real aerosol(ngrid,nlayer,naerkind) ! Aerosols.
244	real zh(ngrid,nlayer) ! Potential temperature (K).
245	real pw(ngrid,nlayer) ! Vertical velocity (m/s). (NOTE : >0 WHEN DOWNWARDS !!)
246
247	integer l,ig,ierr,iq,nw,isoil
248
249	! FOR DIAGNOSTIC :
250
251	real,dimension(:),allocatable,save :: fluxsurf_lw ! Incident Long Wave (IR) surface flux (W.m-2).
252	real,dimension(:),allocatable,save :: fluxsurf_sw ! Incident Short Wave (stellar) surface flux (W.m-2).
253	real,dimension(:),allocatable,save :: fluxsurfabs_sw ! Absorbed Short Wave (stellar) flux by the surface (W.m-2).
254	real,dimension(:),allocatable,save :: fluxtop_lw ! Outgoing LW (IR) flux to space (W.m-2).
255	real,dimension(:),allocatable,save :: fluxabs_sw ! Absorbed SW (stellar) flux (W.m-2).
256	real,dimension(:),allocatable,save :: fluxtop_dn ! Incoming SW (stellar) radiation at the top of the atmosphere (W.m-2).
257	real,dimension(:),allocatable,save :: fluxdyn ! Horizontal heat transport by dynamics (W.m-2).
258	real,dimension(:,:),allocatable,save :: OLR_nu ! Outgoing LW radiation in each band (Normalized to the band width (W/m2/cm-1)).
259	real,dimension(:,:),allocatable,save :: OSR_nu ! Outgoing SW radiation in each band (Normalized to the band width (W/m2/cm-1)).
260	real,dimension(:,:),allocatable,save :: zdtlw ! LW heating tendencies (K/s).
261	real,dimension(:,:),allocatable,save :: zdtsw ! SW heating tendencies (K/s).
262	real,dimension(:),allocatable,save :: sensibFlux ! Turbulent flux given by the atmosphere to the surface (W.m-2).
263
264	!$OMP THREADPRIVATE(fluxsurf_lw,fluxsurf_sw,fluxsurfabs_sw,fluxtop_lw,fluxabs_sw,fluxtop_dn,fluxdyn,OLR_nu,OSR_nu,&
265
266	!$OMP zdtlw,zdtsw,sensibFlux)
267
268	real zls ! Solar longitude (radians).
269	real zlss ! Sub solar point longitude (radians).
270	real zday ! Date (time since Ls=0, calculated in sols).
271	real zzlay(ngrid,nlayer) ! Altitude at the middle of the atmospheric layers.
272	real zzlev(ngrid,nlayer+1) ! Altitude at the atmospheric layer boundaries.
273
274	! TENDENCIES due to various processes :
275
276	! For Surface Temperature : (K/s)
277	real zdtsurf(ngrid) ! Cumulated tendencies.
278	real zdtsurfmr(ngrid) ! Mass_redistribution routine.
279	real zdtsurfc(ngrid) ! Condense_co2 routine.
280	real zdtsdif(ngrid) ! Turbdiff/vdifc routines.
281	real zdtsurf_hyd(ngrid) ! Hydrol routine.
282
283	! For Atmospheric Temperatures : (K/s)
284	real dtlscale(ngrid,nlayer) ! Largescale routine.
285	real zdtc(ngrid,nlayer) ! Condense_co2 routine.
286	real zdtdif(ngrid,nlayer) ! Turbdiff/vdifc routines.
287	real zdtmr(ngrid,nlayer) ! Mass_redistribution routine.
288	real zdtrain(ngrid,nlayer) ! Rain routine.
289	real dtmoist(ngrid,nlayer) ! Moistadj routine.
290	real dt_ekman(ngrid,noceanmx), dt_hdiff(ngrid,noceanmx) ! Slab_ocean routine.
291	real zdtsw1(ngrid,nlayer), zdtlw1(ngrid,nlayer) ! Callcorrk routine.
292
293	! For Surface Tracers : (kg/m2/s)
294	real dqsurf(ngrid,nq) ! Cumulated tendencies.
295	real zdqsurfc(ngrid) ! Condense_co2 routine.
296	real zdqsdif(ngrid,nq) ! Turbdiff/vdifc routines.
297	real zdqssed(ngrid,nq) ! Callsedim routine.
298	real zdqsurfmr(ngrid,nq) ! Mass_redistribution routine.
299	real zdqsrain(ngrid), zdqssnow(ngrid) ! Rain routine.
300	real dqs_hyd(ngrid,nq) ! Hydrol routine.
301
302	! For Tracers : (kg/kg_of_air/s)
303	real zdqc(ngrid,nlayer,nq) ! Condense_co2 routine.
304	real zdqadj(ngrid,nlayer,nq) ! Convadj routine.
305	real zdqdif(ngrid,nlayer,nq) ! Turbdiff/vdifc routines.
306	real zdqevap(ngrid,nlayer) ! Turbdiff routine.
307	real zdqsed(ngrid,nlayer,nq) ! Callsedim routine.
308	real zdqmr(ngrid,nlayer,nq) ! Mass_redistribution routine.
309	real zdqrain(ngrid,nlayer,nq) ! Rain routine.
310	real dqmoist(ngrid,nlayer,nq) ! Moistadj routine.
311	real dqvaplscale(ngrid,nlayer) ! Largescale routine.
312	real dqcldlscale(ngrid,nlayer) ! Largescale routine.
313
314	! For Winds : (m/s/s)
315	real zdvadj(ngrid,nlayer),zduadj(ngrid,nlayer) ! Convadj routine.
316	real zdumr(ngrid,nlayer),zdvmr(ngrid,nlayer) ! Mass_redistribution routine.
317	real zdvdif(ngrid,nlayer),zdudif(ngrid,nlayer) ! Turbdiff/vdifc routines.
318	real zdhdif(ngrid,nlayer) ! Turbdiff/vdifc routines.
319	real zdhadj(ngrid,nlayer) ! Convadj routine.
320
321	! For Pressure and Mass :
322	real zdmassmr(ngrid,nlayer) ! Atmospheric Mass tendency for mass_redistribution (kg_of_air/m2/s).
323	real zdmassmr_col(ngrid) ! Atmospheric Column Mass tendency for mass_redistribution (kg_of_air/m2/s).
324	real zdpsrfmr(ngrid) ! Pressure tendency for mass_redistribution routine (Pa/s).
325
326
327
328	! Local variables for LOCAL CALCULATIONS:
329	! ---------------------------------------
330	real zflubid(ngrid)
331	real zplanck(ngrid),zpopsk(ngrid,nlayer)
332	real ztim1,ztim2,ztim3, z1,z2
333	real ztime_fin
334	real zdh(ngrid,nlayer)
335	real gmplanet
336	real taux(ngrid),tauy(ngrid)
337
338
339	! local variables for DIAGNOSTICS : (diagfi & stat)
340	! -------------------------------------------------
341	real ps(ngrid) ! Surface Pressure.
342	real zt(ngrid,nlayer) ! Atmospheric Temperature.
343	real zu(ngrid,nlayer),zv(ngrid,nlayer) ! Zonal and Meridional Winds.
344	real zq(ngrid,nlayer,nq) ! Atmospheric Tracers.
345	real zdtadj(ngrid,nlayer) ! Convadj Diagnostic.
346	real zdtdyn(ngrid,nlayer) ! Dynamical Heating (K/s).
347	real zdudyn(ngrid,nlayer) ! Dynamical Zonal Wind tendency (m.s-2).
348	real,allocatable,dimension(:,:),save :: ztprevious ! Previous loop Atmospheric Temperature (K) ! Useful for Dynamical Heating calculation.
349	real,allocatable,dimension(:,:),save :: zuprevious ! Previous loop Zonal Wind (m.s-1) ! Useful for Zonal Wind tendency calculation.
350	!$OMP THREADPRIVATE(ztprevious,zuprevious)
351
352	real reff(ngrid,nlayer) ! Effective dust radius (used if doubleq=T).
353	real vmr(ngrid,nlayer) ! volume mixing ratio
354	real time_phys
355	real,allocatable,dimension(:),save :: tau_col ! Total Aerosol Optical Depth.
356	!$OMP THREADPRIVATE(tau_col)
357
358	real ISR,ASR,OLR,GND,DYN,GSR,Ts1,Ts2,Ts3,TsS ! for Diagnostic.
359
360	real qcol(ngrid,nq) ! Tracer Column Mass (kg/m2).
361
362	! included by RW for H2O Manabe scheme
363	real rneb_man(ngrid,nlayer) ! H2O cloud fraction (moistadj).
364	real rneb_lsc(ngrid,nlayer) ! H2O cloud fraction (large scale).
365
366
367	! to test energy conservation (RW+JL)
368	real mass(ngrid,nlayer),massarea(ngrid,nlayer)
369	real dEtot, dEtots, AtmToSurf_TurbFlux
370	real,save :: dEtotSW, dEtotsSW, dEtotLW, dEtotsLW
371	!$OMP THREADPRIVATE(dEtotSW, dEtotsSW, dEtotLW, dEtotsLW)
372	real dEzRadsw(ngrid,nlayer),dEzRadlw(ngrid,nlayer),dEzdiff(ngrid,nlayer)
373	real dEdiffs(ngrid),dEdiff(ngrid)
374	real madjdE(ngrid), lscaledE(ngrid),madjdEz(ngrid,nlayer), lscaledEz(ngrid,nlayer)
375
376	!JL12 conservation test for mean flow kinetic energy has been disabled temporarily
377
378	real dtmoist_max,dtmoist_min
379	real dItot, dItot_tmp, dVtot, dVtot_tmp
380
381	real,allocatable,save :: hice(:) ! Oceanic Ice height. by BC
382	!$OMP THREADPRIVATE(hice)
383
384	real h2otot ! Total Amount of water. For diagnostic.
385	real icesrf,liqsrf,icecol,vapcol ! Total Amounts of water (ice,liq,vap). For diagnostic.
386	real dWtot, dWtot_tmp, dWtots, dWtots_tmp
387	logical,save :: watertest
388	!$OMP THREADPRIVATE(watertest)
389
390	real qsat(ngrid,nlayer) ! Water Vapor Volume Mixing Ratio at saturation (kg/kg_of_air).
391	real RH(ngrid,nlayer) ! Relative humidity.
392	real H2Omaxcol(ngrid) ! Maximum possible H2O column amount (at 100% saturation) (kg/m2).
393	real psat_tmp
394
395	logical clearsky ! For double radiative transfer call. By BC
396
397	! For Clear Sky Case.
398	real fluxsurf_lw1(ngrid), fluxsurf_sw1(ngrid), fluxsurfabs_sw1(ngrid) ! For SW/LW flux.
399	real fluxtop_lw1(ngrid), fluxabs_sw1(ngrid) ! For SW/LW flux.
400	real albedo_equivalent1(ngrid) ! For Equivalent albedo calculation.
401	real tau_col1(ngrid) ! For aerosol optical depth diagnostic.
402	real OLR_nu1(ngrid,L_NSPECTI), OSR_nu1(ngrid,L_NSPECTV) ! For Outgoing Radiation diagnostics.
403	real tf, ntf
404
405	real,allocatable,dimension(:,:),save :: cloudfrac ! Fraction of clouds (%).
406	real,allocatable,dimension(:),save :: totcloudfrac ! Column fraction of clouds (%).
407	!$OMP THREADPRIVATE(cloudfrac,totcloudfrac)
408
409	real nconsMAX, vdifcncons(ngrid), cadjncons(ngrid) ! Vdfic water conservation test. By RW
410
411	real,allocatable,dimension(:,:),save :: qsurf_hist
412	!$OMP THREADPRIVATE(qsurf_hist)
413
414	real muvar(ngrid,nlayer+1) ! For Runaway Greenhouse 1D study. By RW
415
416	real,allocatable,dimension(:,:,:),save :: reffrad ! Aerosol effective radius (m). By RW
417	real,allocatable,dimension(:,:,:),save :: nueffrad ! Aerosol effective radius variance. By RW
418	!$OMP THREADPRIVATE(reffrad,nueffrad)
419
420	real reffcol(ngrid,naerkind)
421
422	! Sourceevol for 'accelerated ice evolution'. By RW
423	real,allocatable,dimension(:),save :: ice_initial
424	real delta_ice,ice_tot
425	real,allocatable,dimension(:),save :: ice_min
426	integer num_run
427	logical,save :: ice_update
428	!$OMP THREADPRIVATE(ice_initial,ice_min,ice_update)
429
430	! For slab ocean. By BC
431	real, dimension(:),allocatable,save :: pctsrf_sic
432	real, dimension(:,:),allocatable,save :: tslab
433	real, dimension(:),allocatable,save :: tsea_ice
434	real, dimension(:),allocatable,save :: sea_ice
435	real, dimension(:),allocatable,save :: zmasq
436	integer, dimension(:),allocatable,save ::knindex
437	!$OMP THREADPRIVATE(pctsrf_sic,tslab,tsea_ice,sea_ice,zmasq,knindex)
438
439	real :: tsurf2(ngrid)
440	real :: flux_o(ngrid),flux_g(ngrid),fluxgrdocean(ngrid)
441	real :: flux_sens_lat(ngrid)
442	real :: qsurfint(ngrid,nq)
443
444
445	!==================================================================================================
446
447	! -----------------
448	! I. INITIALISATION
449	! -----------------
450
451	! --------------------------------
452	! I.1 First Call Initialisation.
453	! --------------------------------
454	if (firstcall) then
455
456	! Allocate saved arrays.
457	ALLOCATE(tsurf(ngrid))
458	ALLOCATE(tsoil(ngrid,nsoilmx))
459	ALLOCATE(albedo(ngrid,L_NSPECTV))
460	ALLOCATE(albedo_equivalent(ngrid))
461	ALLOCATE(albedo_snow_SPECTV(L_NSPECTV))
462	ALLOCATE(albedo_co2_ice_SPECTV(L_NSPECTV))
463	ALLOCATE(albedo_bareground(ngrid))
464	ALLOCATE(rnat(ngrid))
465	ALLOCATE(emis(ngrid))
466	ALLOCATE(dtrad(ngrid,nlayer))
467	ALLOCATE(fluxrad_sky(ngrid))
468	ALLOCATE(fluxrad(ngrid))
469	ALLOCATE(capcal(ngrid))
470	ALLOCATE(fluxgrd(ngrid))
471	ALLOCATE(qsurf(ngrid,nq))
472	ALLOCATE(q2(ngrid,nlayer+1))
473	ALLOCATE(ztprevious(ngrid,nlayer))
474	ALLOCATE(zuprevious(ngrid,nlayer))
475	ALLOCATE(cloudfrac(ngrid,nlayer))
476	ALLOCATE(totcloudfrac(ngrid))
477	ALLOCATE(hice(ngrid))
478	ALLOCATE(qsurf_hist(ngrid,nq))
479	ALLOCATE(reffrad(ngrid,nlayer,naerkind))
480	ALLOCATE(nueffrad(ngrid,nlayer,naerkind))
481	ALLOCATE(ice_initial(ngrid))
482	ALLOCATE(ice_min(ngrid))
483	ALLOCATE(fluxsurf_lw(ngrid))
484	ALLOCATE(fluxsurf_sw(ngrid))
485	ALLOCATE(fluxsurfabs_sw(ngrid))
486	ALLOCATE(fluxtop_lw(ngrid))
487	ALLOCATE(fluxabs_sw(ngrid))
488	ALLOCATE(fluxtop_dn(ngrid))
489	ALLOCATE(fluxdyn(ngrid))
490	ALLOCATE(OLR_nu(ngrid,L_NSPECTI))
491	ALLOCATE(OSR_nu(ngrid,L_NSPECTV))
492	ALLOCATE(sensibFlux(ngrid))
493	ALLOCATE(zdtlw(ngrid,nlayer))
494	ALLOCATE(zdtsw(ngrid,nlayer))
495	ALLOCATE(tau_col(ngrid))
496	ALLOCATE(pctsrf_sic(ngrid))
497	ALLOCATE(tslab(ngrid,noceanmx))
498	ALLOCATE(tsea_ice(ngrid))
499	ALLOCATE(sea_ice(ngrid))
500	ALLOCATE(zmasq(ngrid))
501	ALLOCATE(knindex(ngrid))
502
503	! This is defined in comsaison_h
504	ALLOCATE(mu0(ngrid))
505	ALLOCATE(fract(ngrid))
506	! This is defined in radcommon_h
507	ALLOCATE(glat(ngrid))
508
509
510	! Variables set to 0
511	! ~~~~~~~~~~~~~~~~~~
512	dtrad(:,:) = 0.0
513	fluxrad(:) = 0.0
514	tau_col(:) = 0.0
515	zdtsw(:,:) = 0.0
516	zdtlw(:,:) = 0.0
517
518
519	! Initialize aerosol indexes.
520	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~
521	call iniaerosol()
522
523
524	! Initialize tracer names, indexes and properties.
525	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
526	IF (.NOT.ALLOCATED(noms)) ALLOCATE(noms(nq)) ! (because noms is an argument of physdem1 whether or not tracer is on)
527	if (tracer) then
528	call initracer(ngrid,nq,nametrac)
529	endif
530
531
532	! Read 'startfi.nc' file.
533	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
534	call phyetat0(startphy_file, &
535	ngrid,nlayer,"startfi.nc",0,0,nsoilmx,nq, &
536	day_ini,time_phys,tsurf,tsoil,emis,q2,qsurf, &
537	cloudfrac,totcloudfrac,hice, &
538	rnat,pctsrf_sic,tslab, tsea_ice,sea_ice)
539	if (.not.startphy_file) then
540	! additionnal "academic" initialization of physics
541	if (is_master) write(,) "Physiq: initializing tsurf(:) to pt(:,1) !!"
542	tsurf(:)=pt(:,1)
543	if (is_master) write(,) "Physiq: initializing tsoil(:) to pt(:,1) !!"
544	do isoil=1,nsoilmx
545	tsoil(1:ngrid,isoil)=tsurf(1:ngrid)
546	enddo
547	if (is_master) write(,) "Physiq: initializing day_ini to pdat !"
548	day_ini=pday
549	endif
550
551	if (pday.ne.day_ini) then
552	write(,) "ERROR in physiq.F90:"
553	write(,) "bad synchronization between physics and dynamics"
554	write(,) "dynamics day: ",pday
555	write(,) "physics day: ",day_ini
556	stop
557	endif
558
559	write (,) 'In physiq day_ini =', day_ini
560
561	! Initialize albedo calculation.
562	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
563	albedo(:,:)=0.0
564	albedo_bareground(:)=0.0
565	albedo_snow_SPECTV(:)=0.0
566	albedo_co2_ice_SPECTV(:)=0.0
567	call surfini(ngrid,nq,qsurf,albedo,albedo_bareground,albedo_snow_SPECTV,albedo_co2_ice_SPECTV)
568
569	! Initialize orbital calculation.
570	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
571	call iniorbit(apoastr,periastr,year_day,peri_day,obliquit)
572
573
574	if(tlocked)then
575	print*,'Planet is tidally locked at resonance n=',nres
576	print*,'Make sure you have the right rotation rate!!!'
577	endif
578
579	! Initialize oceanic variables.
580	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
581
582	if (ok_slab_ocean)then
583
584	call ocean_slab_init(ngrid,ptimestep, tslab, &
585	sea_ice, pctsrf_sic)
586
587	call ini_surf_heat_transp_mod()
588
589	knindex(:) = 0
590
591	do ig=1,ngrid
592	zmasq(ig)=1
593	knindex(ig) = ig
594	if (nint(rnat(ig)).eq.0) then
595	zmasq(ig)=0
596	endif
597	enddo
598
599	CALL init_masquv(ngrid,zmasq)
600
601	endif ! end of 'ok_slab_ocean'.
602
603
604	! Initialize soil.
605	! ~~~~~~~~~~~~~~~~
606	if (callsoil) then
607
608	call soil(ngrid,nsoilmx,firstcall,lastcall,inertiedat, &
609	ptimestep,tsurf,tsoil,capcal,fluxgrd)
610
611	if (ok_slab_ocean) then
612	do ig=1,ngrid
613	if (nint(rnat(ig)).eq.2) then
614	capcal(ig)=capcalocean
615	if (pctsrf_sic(ig).gt.0.5) then
616	capcal(ig)=capcalseaice
617	if (qsurf(ig,igcm_h2o_ice).gt.0.) then
618	capcal(ig)=capcalsno
619	endif
620	endif
621	endif
622	enddo
623	endif ! end of 'ok_slab_ocean'.
624
625	else ! else of 'callsoil'.
626
627	print*,'WARNING! Thermal conduction in the soil turned off'
628	capcal(:)=1.e6
629	fluxgrd(:)=intheat
630	print*,'Flux from ground = ',intheat,' W m^-2'
631
632	endif ! end of 'callsoil'.
633
634	icount=1
635
636	! Decide whether to update ice at end of run.
637	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
638	ice_update=.false.
639	if(sourceevol)then
640	!$OMP MASTER
641	open(128,file='num_run',form='formatted', &
642	status="old",iostat=ierr)
643	if (ierr.ne.0) then
644	write(,) "physiq: Error! No num_run file!"
645	write(,) " (which is needed for sourceevol option)"
646	stop
647	endif
648	read(128,*) num_run
649	close(128)
650	!$OMP END MASTER
651	!$OMP BARRIER
652
653	if(num_run.ne.0.and.mod(num_run,2).eq.0)then
654	print*,'Updating ice at end of this year!'
655	ice_update=.true.
656	ice_min(:)=1.e4
657	endif
658
659	endif ! end of 'sourceevol'.
660
661
662	! Here is defined the type of the surface : Continent or Ocean.
663	! BC2014 : This is now already done in newstart.
664	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
665	if (.not.ok_slab_ocean) then
666
667	rnat(:)=1.
668	do ig=1,ngrid
669	if(inertiedat(ig,1).gt.1.E4)then
670	rnat(ig)=0
671	endif
672	enddo
673
674	print*,'WARNING! Surface type currently decided by surface inertia'
675	print*,'This should be improved e.g. in newstart.F'
676
677	endif ! end of 'ok_slab_ocean'.
678
679
680	! Initialize surface history variable.
681	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
682	qsurf_hist(:,:)=qsurf(:,:)
683
684	! Initialize variable for dynamical heating and zonal wind tendency diagnostic
685	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
686	ztprevious(:,:)=pt(:,:)
687	zuprevious(:,:)=pu(:,:)
688
689	! Set temperature just above condensation temperature (for Early Mars)
690	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
691	if(nearco2cond) then
692	write(,)' WARNING! Starting at Tcond+1K'
693	do l=1, nlayer
694	do ig=1,ngrid
695	pdt(ig,l)= ((-3167.8)/(log(.01*pplay(ig,l))-23.23)+4 &
696	-pt(ig,l)) / ptimestep
697	enddo
698	enddo
699	endif
700
701	if(meanOLR)then
702	call system('rm -f rad_bal.out') ! to record global radiative balance.
703	call system('rm -f tem_bal.out') ! to record global mean/max/min temperatures.
704	call system('rm -f h2o_bal.out') ! to record global hydrological balance.
705	endif
706
707
708	watertest=.false.
709	if(water)then ! Initialize variables for water cycle
710
711	if(enertest)then
712	watertest = .true.
713	endif
714
715	if(ice_update)then
716	ice_initial(:)=qsurf(:,igcm_h2o_ice)
717	endif
718
719	endif
720
721	call su_watercycle ! even if we don't have a water cycle, we might
722	! need epsi for the wvp definitions in callcorrk.F
723
724	if (ngrid.ne.1) then ! Note : no need to create a restart file in 1d.
725	call physdem0("restartfi.nc",longitude,latitude,nsoilmx,ngrid,nlayer,nq, &
726	ptimestep,pday+nday,time_phys,cell_area, &
727	albedo_bareground,inertiedat,zmea,zstd,zsig,zgam,zthe)
728	endif
729
730	! XIOS outputs
731	#ifdef CPP_XIOS
732
733	write(,) "physiq: call initialize_xios_output"
734	call initialize_xios_output(pday,ptime,ptimestep,daysec, &
735	presnivs,pseudoalt)
736	#endif
737	endif ! end of 'firstcall'
738
739	! ------------------------------------------------------
740	! I.2 Initializations done at every physical timestep:
741	! ------------------------------------------------------
742
743	#ifdef CPP_XIOS
744	! update XIOS time/calendar
745	call update_xios_timestep
746	#endif
747
748	! Initialize various variables
749	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
750
751	if ( .not.nearco2cond ) then
752	pdt(1:ngrid,1:nlayer) = 0.0
753	endif
754	zdtsurf(1:ngrid) = 0.0
755	pdq(1:ngrid,1:nlayer,1:nq) = 0.0
756	dqsurf(1:ngrid,1:nq)= 0.0
757	pdu(1:ngrid,1:nlayer) = 0.0
758	pdv(1:ngrid,1:nlayer) = 0.0
759	pdpsrf(1:ngrid) = 0.0
760	zflubid(1:ngrid) = 0.0
761	flux_sens_lat(1:ngrid) = 0.0
762	taux(1:ngrid) = 0.0
763	tauy(1:ngrid) = 0.0
764
765	zday=pday+ptime ! Compute time, in sols (and fraction thereof).
766
767	! Compute Stellar Longitude (Ls), and orbital parameters.
768	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
769	if (season) then
770	call stellarlong(zday,zls)
771	else
772	call stellarlong(float(day_ini),zls)
773	end if
774
775	call orbite(zls,dist_star,declin,right_ascen)
776
777	if (tlocked) then
778	zlss=Mod(-(2.pi(zday/year_day)nres - right_ascen),2.pi)
779	elseif (diurnal) then
780	zlss=-2.pi(zday-.5)
781	else if(diurnal .eqv. .false.) then
782	zlss=9999.
783	endif
784
785
786	! Compute variations of g with latitude (oblate case).
787	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
788	if (oblate .eqv. .false.) then
789	glat(:) = g
790	else if (flatten .eq. 0.0 .or. J2 .eq. 0.0 .or. Rmean .eq. 0.0 .or. MassPlanet .eq. 0.0) then
791	print*,'I need values for flatten, J2, Rmean and MassPlanet to compute glat (else set oblate=.false.)'
792	call abort
793	else
794	gmplanet = MassPlanetgrav1e24
795	do ig=1,ngrid
796	glat(ig)= gmplanet/(Rmean*2) (1.D0 + 0.75 J2 - 2.0flatten/3. + (2.flatten - 15./4. J2) * cos(2. * (pi/2. - latitude(ig))))
797	end do
798	endif
799
800	! Compute geopotential between layers.
801	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
802	zzlay(1:ngrid,1:nlayer)=pphi(1:ngrid,1:nlayer)
803	do l=1,nlayer
804	zzlay(1:ngrid,l)= zzlay(1:ngrid,l)/glat(1:ngrid)
805	enddo
806
807	zzlev(1:ngrid,1)=0.
808	zzlev(1:ngrid,nlayer+1)=1.e7 ! Dummy top of last layer above 10000 km...
809
810	do l=2,nlayer
811	do ig=1,ngrid
812	z1=(pplay(ig,l-1)+pplev(ig,l))/(pplay(ig,l-1)-pplev(ig,l))
813	z2=(pplev(ig,l)+pplay(ig,l))/(pplev(ig,l)-pplay(ig,l))
814	zzlev(ig,l)=(z1zzlay(ig,l-1)+z2zzlay(ig,l))/(z1+z2)
815	enddo
816	enddo
817
818	! Compute potential temperature
819	! Note : Potential temperature calculation may not be the same in physiq and dynamic...
820	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
821	do l=1,nlayer
822	do ig=1,ngrid
823	zpopsk(ig,l)=(pplay(ig,l)/pplev(ig,1))**rcp
824	zh(ig,l)=pt(ig,l)/zpopsk(ig,l)
825	mass(ig,l) = (pplev(ig,l) - pplev(ig,l+1))/glat(ig)
826	massarea(ig,l)=mass(ig,l)*cell_area(ig)
827	enddo
828	enddo
829
830	! Compute vertical velocity (m/s) from vertical mass flux
831	! w = F / (rhoarea) and rho = P/(rT)
832	! But first linearly interpolate mass flux to mid-layers
833	do l=1,nlayer-1
834	pw(1:ngrid,l)=0.5*(flxw(1:ngrid,l)+flxw(1:ngrid,l+1))
835	enddo
836	pw(1:ngrid,nlayer)=0.5*flxw(1:ngrid,nlayer) ! since flxw(nlayer+1)=0
837	do l=1,nlayer
838	pw(1:ngrid,l)=(pw(1:ngrid,l)rpt(1:ngrid,l)) / &
839	(pplay(1:ngrid,l)*cell_area(1:ngrid))
840	enddo
841
842	!---------------------------------
843	! II. Compute radiative tendencies
844	!---------------------------------
845
846	if (callrad) then
847	if( mod(icount-1,iradia).eq.0.or.lastcall) then
848
849	! Compute local stellar zenith angles
850	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
851	if (tlocked) then
852	! JL14 corrects tidally resonant (and inclined) cases. nres=omega_rot/omega_orb
853	ztim1=SIN(declin)
854	ztim2=COS(declin)*COS(zlss)
855	ztim3=COS(declin)*SIN(zlss)
856
857	call stelang(ngrid,sinlon,coslon,sinlat,coslat, &
858	ztim1,ztim2,ztim3,mu0,fract, flatten)
859
860	elseif (diurnal) then
861	ztim1=SIN(declin)
862	ztim2=COS(declin)COS(2.pi*(zday-.5))
863	ztim3=-COS(declin)SIN(2.pi*(zday-.5))
864
865	call stelang(ngrid,sinlon,coslon,sinlat,coslat, &
866	ztim1,ztim2,ztim3,mu0,fract, flatten)
867	else if(diurnal .eqv. .false.) then
868
869	call mucorr(ngrid,declin,latitude,mu0,fract,10000.,rad,flatten)
870	! WARNING: this function appears not to work in 1D
871
872	endif
873
874	! Eclipse incoming sunlight (e.g. Saturn ring shadowing).
875	if(rings_shadow) then
876	call call_rings(ngrid, ptime, pday, diurnal)
877	endif
878
879
880	if (corrk) then
881
882	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
883	! II.a Call correlated-k radiative transfer scheme
884	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
885	if(kastprof)then
886	print*,'kastprof should not = true here'
887	call abort
888	endif
889	if(water) then
890	muvar(1:ngrid,1:nlayer)=mugaz/(1.e0+(1.e0/epsi-1.e0)*pq(1:ngrid,1:nlayer,igcm_h2o_vap))
891	muvar(1:ngrid,nlayer+1)=mugaz/(1.e0+(1.e0/epsi-1.e0)*pq(1:ngrid,nlayer,igcm_h2o_vap))
892	! take into account water effect on mean molecular weight
893	else
894	muvar(1:ngrid,1:nlayer+1)=mugaz
895	endif
896
897
898	if(ok_slab_ocean) then
899	tsurf2(:)=tsurf(:)
900	do ig=1,ngrid
901	if (nint(rnat(ig))==0) then
902	tsurf(ig)=((1.-pctsrf_sic(ig))tslab(ig,1)4+pctsrf_sic(ig)tsea_ice(ig)4)0.25
903	endif
904	enddo
905	endif !(ok_slab_ocean)
906
907	! standard callcorrk
908	clearsky=.false.
909	call callcorrk(ngrid,nlayer,pq,nq,qsurf, &
910	albedo,albedo_equivalent,emis,mu0,pplev,pplay,pt, &
911	tsurf,fract,dist_star,aerosol,muvar, &
912	zdtlw,zdtsw,fluxsurf_lw,fluxsurf_sw, &
913	fluxsurfabs_sw,fluxtop_lw, &
914	fluxabs_sw,fluxtop_dn,OLR_nu,OSR_nu, &
915	tau_col,cloudfrac,totcloudfrac, &
916	clearsky,firstcall,lastcall)
917
918	! Option to call scheme once more for clear regions
919	if(CLFvarying)then
920
921	! ---> PROBLEMS WITH ALLOCATED ARRAYS : temporary solution in callcorrk: do not deallocate if CLFvarying ...
922	clearsky=.true.
923	call callcorrk(ngrid,nlayer,pq,nq,qsurf, &
924	albedo,albedo_equivalent1,emis,mu0,pplev,pplay,pt, &
925	tsurf,fract,dist_star,aerosol,muvar, &
926	zdtlw1,zdtsw1,fluxsurf_lw1,fluxsurf_sw1, &
927	fluxsurfabs_sw1,fluxtop_lw1, &
928	fluxabs_sw1,fluxtop_dn,OLR_nu1,OSR_nu1, &
929	tau_col1,cloudfrac,totcloudfrac, &
930	clearsky,firstcall,lastcall)
931	clearsky = .false. ! just in case.
932
933	! Sum the fluxes and heating rates from cloudy/clear cases
934	do ig=1,ngrid
935	tf=totcloudfrac(ig)
936	ntf=1.-tf
937	fluxsurf_lw(ig) = ntffluxsurf_lw1(ig) + tffluxsurf_lw(ig)
938	fluxsurf_sw(ig) = ntffluxsurf_sw1(ig) + tffluxsurf_sw(ig)
939	albedo_equivalent(ig) = ntfalbedo_equivalent1(ig) + tfalbedo_equivalent(ig)
940	fluxsurfabs_sw(ig) = ntffluxsurfabs_sw1(ig) + tffluxsurfabs_sw(ig)
941	fluxtop_lw(ig) = ntffluxtop_lw1(ig) + tffluxtop_lw(ig)
942	fluxabs_sw(ig) = ntffluxabs_sw1(ig) + tffluxabs_sw(ig)
943	tau_col(ig) = ntftau_col1(ig) + tftau_col(ig)
944
945	zdtlw(ig,1:nlayer) = ntfzdtlw1(ig,1:nlayer) + tfzdtlw(ig,1:nlayer)
946	zdtsw(ig,1:nlayer) = ntfzdtsw1(ig,1:nlayer) + tfzdtsw(ig,1:nlayer)
947
948	OSR_nu(ig,1:L_NSPECTV) = ntfOSR_nu1(ig,1:L_NSPECTV) + tfOSR_nu(ig,1:L_NSPECTV)
949	OLR_nu(ig,1:L_NSPECTI) = ntfOLR_nu1(ig,1:L_NSPECTI) + tfOLR_nu(ig,1:L_NSPECTI)
950	enddo
951
952	endif ! end of CLFvarying.
953
954	if(ok_slab_ocean) then
955	tsurf(:)=tsurf2(:)
956	endif
957
958
959	! Radiative flux from the sky absorbed by the surface (W.m-2).
960	GSR=0.0
961	fluxrad_sky(1:ngrid)=emis(1:ngrid)*fluxsurf_lw(1:ngrid)+fluxsurfabs_sw(1:ngrid)
962
963	!if(noradsurf)then ! no lower surface; SW flux just disappears
964	! GSR = SUM(fluxsurf_sw(1:ngrid)*cell_area(1:ngrid))/totarea
965	! fluxrad_sky(1:ngrid)=emis(1:ngrid)*fluxsurf_lw(1:ngrid)
966	! print*,'SW lost in deep atmosphere = ',GSR,' W m^-2'
967	!endif
968
969	! Net atmospheric radiative heating rate (K.s-1)
970	dtrad(1:ngrid,1:nlayer)=zdtsw(1:ngrid,1:nlayer)+zdtlw(1:ngrid,1:nlayer)
971
972	! Late initialization of the Ice Spectral Albedo. We needed the visible bands to do that !
973	if (firstcall .and. albedo_spectral_mode) then
974	call spectral_albedo_calc(albedo_snow_SPECTV)
975	endif
976
977	elseif(newtonian)then
978
979	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
980	! II.b Call Newtonian cooling scheme
981	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
982	call newtrelax(ngrid,nlayer,mu0,sinlat,zpopsk,pt,pplay,pplev,dtrad,firstcall)
983
984	zdtsurf(1:ngrid) = +(pt(1:ngrid,1)-tsurf(1:ngrid))/ptimestep
985	! e.g. surface becomes proxy for 1st atmospheric layer ?
986
987	else
988
989	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
990	! II.c Atmosphere has no radiative effect
991	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
992	fluxtop_dn(1:ngrid) = fract(1:ngrid)mu0(1:ngrid)Fat1AU/dist_star**2
993	if(ngrid.eq.1)then ! / by 4 globally in 1D case...
994	fluxtop_dn(1) = fract(1)Fat1AU/dist_star*2/2.0
995	endif
996	fluxsurf_sw(1:ngrid) = fluxtop_dn(1:ngrid)
997	print*,'------------WARNING---WARNING------------' ! by MT2015.
998	print*,'You are in corrk=false mode, '
999	print*,'and the surface albedo is taken equal to the first visible spectral value'
1000
1001	fluxsurfabs_sw(1:ngrid) = fluxtop_dn(1:ngrid)*(1.-albedo(1:ngrid,1))
1002	fluxrad_sky(1:ngrid) = fluxsurfabs_sw(1:ngrid)
1003	fluxtop_lw(1:ngrid) = emis(1:ngrid)sigmatsurf(1:ngrid)**4
1004
1005	dtrad(1:ngrid,1:nlayer)=0.0 ! no atmospheric radiative heating
1006
1007	endif ! end of corrk
1008
1009	endif ! of if(mod(icount-1,iradia).eq.0)
1010
1011
1012	! Transformation of the radiative tendencies
1013	! ------------------------------------------
1014	zplanck(1:ngrid)=tsurf(1:ngrid)*tsurf(1:ngrid)
1015	zplanck(1:ngrid)=emis(1:ngrid)sigmazplanck(1:ngrid)*zplanck(1:ngrid)
1016	fluxrad(1:ngrid)=fluxrad_sky(1:ngrid)-zplanck(1:ngrid)
1017	pdt(1:ngrid,1:nlayer)=pdt(1:ngrid,1:nlayer)+dtrad(1:ngrid,1:nlayer)
1018
1019	! Test of energy conservation
1020	!----------------------------
1021	if(enertest)then
1022	call planetwide_sumval(cppmassarea(:,:)zdtsw(:,:)/totarea_planet,dEtotSW)
1023	call planetwide_sumval(cppmassarea(:,:)zdtlw(:,:)/totarea_planet,dEtotLW)
1024	!call planetwide_sumval(fluxsurf_sw(:)(1.-albedo_equivalent(:))cell_area(:)/totarea_planet,dEtotsSW) !JL13 carefull, albedo can have changed since the last time we called corrk
1025	call planetwide_sumval(fluxsurfabs_sw(:)*cell_area(:)/totarea_planet,dEtotsSW) !JL13 carefull, albedo can have changed since the last time we called corrk
1026	call planetwide_sumval((fluxsurf_lw(:)emis(:)-zplanck(:))cell_area(:)/totarea_planet,dEtotsLW)
1027	dEzRadsw(:,:)=cppmass(:,:)zdtsw(:,:)
1028	dEzRadlw(:,:)=cppmass(:,:)zdtlw(:,:)
1029	if (is_master) then
1030	print*,'---------------------------------------------------------------'
1031	print*,'In corrk SW atmospheric heating =',dEtotSW,' W m-2'
1032	print*,'In corrk LW atmospheric heating =',dEtotLW,' W m-2'
1033	print*,'atmospheric net rad heating (SW+LW) =',dEtotLW+dEtotSW,' W m-2'
1034	print*,'In corrk SW surface heating =',dEtotsSW,' W m-2'
1035	print*,'In corrk LW surface heating =',dEtotsLW,' W m-2'
1036	print*,'surface net rad heating (SW+LW) =',dEtotsLW+dEtotsSW,' W m-2'
1037	endif
1038	endif ! end of 'enertest'
1039
1040	endif ! of if (callrad)
1041
1042
1043
1044	! --------------------------------------------
1045	! III. Vertical diffusion (turbulent mixing) :
1046	! --------------------------------------------
1047
1048	if (calldifv) then
1049
1050	zflubid(1:ngrid)=fluxrad(1:ngrid)+fluxgrd(1:ngrid)
1051
1052	! JL12 the following if test is temporarily there to allow us to compare the old vdifc with turbdiff.
1053	if (UseTurbDiff) then
1054
1055	call turbdiff(ngrid,nlayer,nq,rnat, &
1056	ptimestep,capcal,lwrite, &
1057	pplay,pplev,zzlay,zzlev,z0, &
1058	pu,pv,pt,zpopsk,pq,tsurf,emis,qsurf, &
1059	pdt,pdq,zflubid, &
1060	zdudif,zdvdif,zdtdif,zdtsdif, &
1061	sensibFlux,q2,zdqdif,zdqevap,zdqsdif, &
1062	taux,tauy,lastcall)
1063
1064	else
1065
1066	zdh(1:ngrid,1:nlayer)=pdt(1:ngrid,1:nlayer)/zpopsk(1:ngrid,1:nlayer)
1067
1068	call vdifc(ngrid,nlayer,nq,rnat,zpopsk, &
1069	ptimestep,capcal,lwrite, &
1070	pplay,pplev,zzlay,zzlev,z0, &
1071	pu,pv,zh,pq,tsurf,emis,qsurf, &
1072	zdh,pdq,zflubid, &
1073	zdudif,zdvdif,zdhdif,zdtsdif, &
1074	sensibFlux,q2,zdqdif,zdqsdif, &
1075	taux,tauy,lastcall)
1076
1077	zdtdif(1:ngrid,1:nlayer)=zdhdif(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer) ! for diagnostic only
1078	zdqevap(1:ngrid,1:nlayer)=0.
1079
1080	end if !end of 'UseTurbDiff'
1081
1082
1083	pdv(1:ngrid,1:nlayer)=pdv(1:ngrid,1:nlayer)+zdvdif(1:ngrid,1:nlayer)
1084	pdu(1:ngrid,1:nlayer)=pdu(1:ngrid,1:nlayer)+zdudif(1:ngrid,1:nlayer)
1085	pdt(1:ngrid,1:nlayer)=pdt(1:ngrid,1:nlayer)+zdtdif(1:ngrid,1:nlayer)
1086	zdtsurf(1:ngrid)=zdtsurf(1:ngrid)+zdtsdif(1:ngrid)
1087
1088
1089	if(ok_slab_ocean)then
1090	flux_sens_lat(1:ngrid)=(zdtsdif(1:ngrid)*capcal(1:ngrid)-fluxrad(1:ngrid))
1091	endif
1092
1093
1094	if (tracer) then
1095	pdq(1:ngrid,1:nlayer,1:nq)=pdq(1:ngrid,1:nlayer,1:nq)+ zdqdif(1:ngrid,1:nlayer,1:nq)
1096	dqsurf(1:ngrid,1:nq)=dqsurf(1:ngrid,1:nq) + zdqsdif(1:ngrid,1:nq)
1097	end if ! of if (tracer)
1098
1099
1100	! test energy conservation
1101	!-------------------------
1102	if(enertest)then
1103
1104	dEzdiff(:,:)=cppmass(:,:)zdtdif(:,:)
1105	do ig = 1, ngrid
1106	dEdiff(ig)=SUM(dEzdiff (ig,:))+ sensibFlux(ig)! subtract flux to the ground
1107	dEzdiff(ig,1)= dEzdiff(ig,1)+ sensibFlux(ig)! subtract flux to the ground
1108	enddo
1109
1110	call planetwide_sumval(dEdiff(:)*cell_area(:)/totarea_planet,dEtot)
1111	dEdiffs(:)=capcal(:)*zdtsdif(:)-zflubid(:)-sensibFlux(:)
1112	call planetwide_sumval(dEdiffs(:)*cell_area(:)/totarea_planet,dEtots)
1113	call planetwide_sumval(sensibFlux(:)*cell_area(:)/totarea_planet,AtmToSurf_TurbFlux)
1114
1115	if (is_master) then
1116
1117	if (UseTurbDiff) then
1118	print*,'In TurbDiff sensible flux (atm=>surf) =',AtmToSurf_TurbFlux,' W m-2'
1119	print*,'In TurbDiff non-cons atm nrj change =',dEtot,' W m-2'
1120	print*,'In TurbDiff (correc rad+latent heat) surf nrj change =',dEtots,' W m-2'
1121	else
1122	print*,'In vdifc sensible flux (atm=>surf) =',AtmToSurf_TurbFlux,' W m-2'
1123	print*,'In vdifc non-cons atm nrj change =',dEtot,' W m-2'
1124	print*,'In vdifc (correc rad+latent heat) surf nrj change =',dEtots,' W m-2'
1125	end if
1126	endif ! end of 'is_master'
1127
1128	! JL12 : note that the black body radiative flux emitted by the surface has been updated by the implicit scheme but not given back elsewhere.
1129	endif ! end of 'enertest'
1130
1131
1132	! Test water conservation.
1133	if(watertest.and.water)then
1134
1135	call planetwide_sumval(massarea(:,:)zdqdif(:,:,igcm_h2o_vap)ptimestep/totarea_planet,dWtot_tmp)
1136	call planetwide_sumval(zdqsdif(:,igcm_h2o_vap)cell_area(:)ptimestep/totarea_planet,dWtots_tmp)
1137	do ig = 1, ngrid
1138	vdifcncons(ig)=SUM(mass(ig,:)*zdqdif(ig,:,igcm_h2o_vap))
1139	enddo
1140	call planetwide_sumval(massarea(:,:)zdqdif(:,:,igcm_h2o_ice)ptimestep/totarea_planet,dWtot)
1141	call planetwide_sumval(zdqsdif(:,igcm_h2o_ice)cell_area(:)ptimestep/totarea_planet,dWtots)
1142	dWtot = dWtot + dWtot_tmp
1143	dWtots = dWtots + dWtots_tmp
1144	do ig = 1, ngrid
1145	vdifcncons(ig)=vdifcncons(ig) + SUM(mass(ig,:)*zdqdif(ig,:,igcm_h2o_ice))
1146	enddo
1147	call planetwide_maxval(vdifcncons(:),nconsMAX)
1148
1149	if (is_master) then
1150	print*,'---------------------------------------------------------------'
1151	print*,'In difv atmospheric water change =',dWtot,' kg m-2'
1152	print*,'In difv surface water change =',dWtots,' kg m-2'
1153	print*,'In difv non-cons factor =',dWtot+dWtots,' kg m-2'
1154	print*,'In difv MAX non-cons factor =',nconsMAX,' kg m-2 s-1'
1155	endif
1156
1157	endif ! end of 'watertest'
1158	!-------------------------
1159
1160	else ! calldifv
1161
1162	if(.not.newtonian)then
1163
1164	zdtsurf(1:ngrid) = zdtsurf(1:ngrid) + (fluxrad(1:ngrid) + fluxgrd(1:ngrid))/capcal(1:ngrid)
1165
1166	endif
1167
1168	endif ! end of 'calldifv'
1169
1170
1171	!----------------------------------
1172	! IV. Dry convective adjustment :
1173	!----------------------------------
1174
1175	if(calladj) then
1176
1177	zdh(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer)/zpopsk(1:ngrid,1:nlayer)
1178	zduadj(1:ngrid,1:nlayer)=0.0
1179	zdvadj(1:ngrid,1:nlayer)=0.0
1180	zdhadj(1:ngrid,1:nlayer)=0.0
1181
1182
1183	call convadj(ngrid,nlayer,nq,ptimestep, &
1184	pplay,pplev,zpopsk, &
1185	pu,pv,zh,pq, &
1186	pdu,pdv,zdh,pdq, &
1187	zduadj,zdvadj,zdhadj, &
1188	zdqadj)
1189
1190	pdu(1:ngrid,1:nlayer) = pdu(1:ngrid,1:nlayer) + zduadj(1:ngrid,1:nlayer)
1191	pdv(1:ngrid,1:nlayer) = pdv(1:ngrid,1:nlayer) + zdvadj(1:ngrid,1:nlayer)
1192	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer) + zdhadj(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer)
1193	zdtadj(1:ngrid,1:nlayer) = zdhadj(1:ngrid,1:nlayer)*zpopsk(1:ngrid,1:nlayer) ! for diagnostic only
1194
1195	if(tracer) then
1196	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + zdqadj(1:ngrid,1:nlayer,1:nq)
1197	end if
1198
1199	! Test energy conservation
1200	if(enertest)then
1201	call planetwide_sumval(cppmassarea(:,:)zdtadj(:,:)/totarea_planet,dEtot)
1202	if (is_master) print*,'In convadj atmospheric energy change =',dEtot,' W m-2'
1203	endif
1204
1205	! Test water conservation
1206	if(watertest)then
1207	call planetwide_sumval(massarea(:,:)zdqadj(:,:,igcm_h2o_vap)ptimestep/totarea_planet,dWtot_tmp)
1208	do ig = 1, ngrid
1209	cadjncons(ig)=SUM(mass(ig,:)*zdqadj(ig,:,igcm_h2o_vap))
1210	enddo
1211	call planetwide_sumval(massarea(:,:)zdqadj(:,:,igcm_h2o_ice)ptimestep/totarea_planet,dWtot)
1212	dWtot = dWtot + dWtot_tmp
1213	do ig = 1, ngrid
1214	cadjncons(ig)=cadjncons(ig) + SUM(mass(ig,:)*zdqadj(ig,:,igcm_h2o_ice))
1215	enddo
1216	call planetwide_maxval(cadjncons(:),nconsMAX)
1217
1218	if (is_master) then
1219	print*,'In convadj atmospheric water change =',dWtot,' kg m-2'
1220	print*,'In convadj MAX non-cons factor =',nconsMAX,' kg m-2 s-1'
1221	endif
1222
1223	endif ! end of 'watertest'
1224
1225	endif ! end of 'calladj'
1226
1227	!-----------------------------------------------
1228	! V. Carbon dioxide condensation-sublimation :
1229	!-----------------------------------------------
1230
1231	if (co2cond) then
1232
1233	if (.not.tracer) then
1234	print*,'We need a CO2 ice tracer to condense CO2'
1235	call abort
1236	endif
1237	call condense_co2(ngrid,nlayer,nq,ptimestep, &
1238	capcal,pplay,pplev,tsurf,pt, &
1239	pdt,zdtsurf,pq,pdq, &
1240	qsurf,zdqsurfc,albedo,emis, &
1241	albedo_bareground,albedo_co2_ice_SPECTV, &
1242	zdtc,zdtsurfc,pdpsrf,zdqc)
1243
1244	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer)+zdtc(1:ngrid,1:nlayer)
1245	zdtsurf(1:ngrid) = zdtsurf(1:ngrid) + zdtsurfc(1:ngrid)
1246
1247	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq)+ zdqc(1:ngrid,1:nlayer,1:nq)
1248	dqsurf(1:ngrid,igcm_co2_ice) = dqsurf(1:ngrid,igcm_co2_ice) + zdqsurfc(1:ngrid)
1249
1250	! test energy conservation
1251	if(enertest)then
1252	call planetwide_sumval(cppmassarea(:,:)zdtc(:,:)/totarea_planet,dEtot)
1253	call planetwide_sumval(capcal(:)zdtsurfc(:)cell_area(:)/totarea_planet,dEtots)
1254	if (is_master) then
1255	print*,'In co2cloud atmospheric energy change =',dEtot,' W m-2'
1256	print*,'In co2cloud surface energy change =',dEtots,' W m-2'
1257	endif
1258	endif
1259
1260	endif ! end of 'co2cond'
1261
1262
1263	!---------------------------------------------
1264	! VI. Specific parameterizations for tracers
1265	!---------------------------------------------
1266
1267	if (tracer) then
1268
1269	! ---------------------
1270	! VI.1. Water and ice
1271	! ---------------------
1272	if (water) then
1273
1274	! Water ice condensation in the atmosphere
1275	if(watercond.and.(RLVTT.gt.1.e-8))then
1276
1277	dqmoist(1:ngrid,1:nlayer,1:nq)=0.
1278	dtmoist(1:ngrid,1:nlayer)=0.
1279
1280	! Moist Convective Adjustment.
1281	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1282	call moistadj(ngrid,nlayer,nq,pt,pq,pdq,pplev,pplay,dtmoist,dqmoist,ptimestep,rneb_man)
1283
1284	pdq(1:ngrid,1:nlayer,igcm_h2o_vap) = pdq(1:ngrid,1:nlayer,igcm_h2o_vap) &
1285	+ dqmoist(1:ngrid,1:nlayer,igcm_h2o_vap)
1286	pdq(1:ngrid,1:nlayer,igcm_h2o_ice) = pdq(1:ngrid,1:nlayer,igcm_h2o_ice) &
1287	+ dqmoist(1:ngrid,1:nlayer,igcm_h2o_ice)
1288	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer)+dtmoist(1:ngrid,1:nlayer)
1289
1290	! Test energy conservation.
1291	if(enertest)then
1292
1293	call planetwide_sumval(cppmassarea(:,:)dtmoist(:,:)/totarea_planet,dEtot)
1294	call planetwide_maxval(dtmoist(:,:),dtmoist_max)
1295	call planetwide_minval(dtmoist(:,:),dtmoist_min)
1296	madjdEz(:,:)=cppmass(:,:)dtmoist(:,:)
1297	do ig=1,ngrid
1298	madjdE(ig) = cppSUM(mass(:,:)dtmoist(:,:))
1299	enddo
1300
1301	if (is_master) then
1302	print*,'In moistadj atmospheric energy change =',dEtot,' W m-2'
1303	print,'In moistadj MAX atmospheric energy change =',dtmoist_maxptimestep,'K/step'
1304	print,'In moistadj MIN atmospheric energy change =',dtmoist_minptimestep,'K/step'
1305	endif
1306
1307	call planetwide_sumval(massarea(:,:)dqmoist(:,:,igcm_h2o_vap)ptimestep/totarea_planet+ &
1308	massarea(:,:)dqmoist(:,:,igcm_h2o_ice)ptimestep/totarea_planet,dWtot)
1309	if (is_master) print*,'In moistadj atmospheric water change =',dWtot,' kg m-2'
1310
1311	endif ! end of 'enertest'
1312
1313
1314	! Large scale condensation/evaporation.
1315	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1316	call largescale(ngrid,nlayer,nq,ptimestep,pplev,pplay,pt,pq,pdt,pdq,dtlscale,dqvaplscale,dqcldlscale,rneb_lsc)
1317
1318	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer)+dtlscale(1:ngrid,1:nlayer)
1319	pdq(1:ngrid,1:nlayer,igcm_h2o_vap) = pdq(1:ngrid,1:nlayer,igcm_h2o_vap)+dqvaplscale(1:ngrid,1:nlayer)
1320	pdq(1:ngrid,1:nlayer,igcm_h2o_ice) = pdq(1:ngrid,1:nlayer,igcm_h2o_ice)+dqcldlscale(1:ngrid,1:nlayer)
1321
1322	! Test energy conservation.
1323	if(enertest)then
1324	lscaledEz(:,:) = cppmass(:,:)dtlscale(:,:)
1325	do ig=1,ngrid
1326	lscaledE(ig) = cppSUM(mass(:,:)dtlscale(:,:))
1327	enddo
1328	call planetwide_sumval(cppmassarea(:,:)dtlscale(:,:)/totarea_planet,dEtot)
1329
1330	if (is_master) print*,'In largescale atmospheric energy change =',dEtot,' W m-2'
1331
1332	! Test water conservation.
1333	call planetwide_sumval(massarea(:,:)dqvaplscale(:,:)ptimestep/totarea_planet+ &
1334	SUM(massarea(:,:)dqcldlscale(:,:))ptimestep/totarea_planet,dWtot)
1335
1336	if (is_master) print*,'In largescale atmospheric water change =',dWtot,' kg m-2'
1337	endif ! end of 'enertest'
1338
1339	! Compute cloud fraction.
1340	do l = 1, nlayer
1341	do ig=1,ngrid
1342	cloudfrac(ig,l)=MAX(rneb_lsc(ig,l),rneb_man(ig,l))
1343	enddo
1344	enddo
1345
1346	endif ! end of 'watercond'
1347
1348	! Water ice / liquid precipitation.
1349	! ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1350	if(waterrain)then
1351
1352	zdqrain(1:ngrid,1:nlayer,1:nq) = 0.0
1353	zdqsrain(1:ngrid) = 0.0
1354	zdqssnow(1:ngrid) = 0.0
1355
1356	call rain(ngrid,nlayer,nq,ptimestep,pplev,pplay,pt,pdt,pq,pdq, &
1357	zdtrain,zdqrain,zdqsrain,zdqssnow,cloudfrac)
1358
1359	pdq(1:ngrid,1:nlayer,igcm_h2o_vap) = pdq(1:ngrid,1:nlayer,igcm_h2o_vap) &
1360	+ zdqrain(1:ngrid,1:nlayer,igcm_h2o_vap)
1361	pdq(1:ngrid,1:nlayer,igcm_h2o_ice) = pdq(1:ngrid,1:nlayer,igcm_h2o_ice) &
1362	+ zdqrain(1:ngrid,1:nlayer,igcm_h2o_ice)
1363	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer)+zdtrain(1:ngrid,1:nlayer)
1364
1365	dqsurf(1:ngrid,igcm_h2o_vap) = dqsurf(1:ngrid,igcm_h2o_vap)+zdqsrain(1:ngrid)
1366	dqsurf(1:ngrid,igcm_h2o_ice) = dqsurf(1:ngrid,igcm_h2o_ice)+zdqssnow(1:ngrid)
1367
1368	! Test energy conservation.
1369	if(enertest)then
1370
1371	call planetwide_sumval(cppmassarea(:,:)zdtrain(:,:)/totarea_planet,dEtot)
1372	if (is_master) print*,'In rain atmospheric T energy change =',dEtot,' W m-2'
1373	call planetwide_sumval(massarea(:,:)zdqrain(:,:,igcm_h2o_ice)/totarea_planetRLVTT/cpp,dItot_tmp)
1374	call planetwide_sumval(cell_area(:)zdqssnow(:)/totarea_planetRLVTT/cpp,dItot)
1375	dItot = dItot + dItot_tmp
1376	call planetwide_sumval(massarea(:,:)zdqrain(:,:,igcm_h2o_vap)ptimestep/totarea_planet,dVtot_tmp)
1377	call planetwide_sumval(cell_area(:)zdqsrain(:)/totarea_planetRLVTT/cpp,dVtot)
1378	dVtot = dVtot + dVtot_tmp
1379	dEtot = dItot + dVtot
1380
1381	if (is_master) then
1382	print*,'In rain dItot =',dItot,' W m-2'
1383	print*,'In rain dVtot =',dVtot,' W m-2'
1384	print*,'In rain atmospheric L energy change =',dEtot,' W m-2'
1385	endif
1386
1387	! Test water conservation
1388	call planetwide_sumval(massarea(:,:)zdqrain(:,:,igcm_h2o_vap)ptimestep/totarea_planet+ &
1389	massarea(:,:)zdqrain(:,:,igcm_h2o_ice)ptimestep/totarea_planet,dWtot)
1390	call planetwide_sumval((zdqsrain(:)+zdqssnow(:))cell_area(:)ptimestep/totarea_planet,dWtots)
1391
1392	if (is_master) then
1393	print*,'In rain atmospheric water change =',dWtot,' kg m-2'
1394	print*,'In rain surface water change =',dWtots,' kg m-2'
1395	print*,'In rain non-cons factor =',dWtot+dWtots,' kg m-2'
1396	endif
1397
1398	endif ! end of 'enertest'
1399
1400	end if ! enf of 'waterrain'
1401
1402	end if ! end of 'water'
1403
1404	! -------------------------
1405	! VI.2. Aerosol particles
1406	! -------------------------
1407
1408	! Sedimentation.
1409	if (sedimentation) then
1410
1411	zdqsed(1:ngrid,1:nlayer,1:nq) = 0.0
1412	zdqssed(1:ngrid,1:nq) = 0.0
1413
1414	if(watertest)then
1415
1416	iq=igcm_h2o_ice
1417	call planetwide_sumval(massarea(:,:)pq(:,:,iq)ptimestep/totarea_planet,dWtot)
1418	call planetwide_sumval(massarea(:,:)pdq(:,:,iq)ptimestep/totarea_planet,dWtots)
1419	if (is_master) then
1420	print*,'Before sedim pq =',dWtot,' kg m-2'
1421	print*,'Before sedim pdq =',dWtots,' kg m-2'
1422	endif
1423	endif
1424
1425	call callsedim(ngrid,nlayer,ptimestep, &
1426	pplev,zzlev,pt,pdt,pq,pdq, &
1427	zdqsed,zdqssed,nq)
1428
1429	if(watertest)then
1430	iq=igcm_h2o_ice
1431	call planetwide_sumval(massarea(:,:)pq(:,:,iq)ptimestep/totarea_planet,dWtot)
1432	call planetwide_sumval(massarea(:,:)pdq(:,:,iq)ptimestep/totarea_planet,dWtots)
1433	if (is_master) then
1434	print*,'After sedim pq =',dWtot,' kg m-2'
1435	print*,'After sedim pdq =',dWtots,' kg m-2'
1436	endif
1437	endif
1438
1439	! Whether it falls as rain or snow depends only on the surface temperature
1440	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + zdqsed(1:ngrid,1:nlayer,1:nq)
1441	dqsurf(1:ngrid,1:nq) = dqsurf(1:ngrid,1:nq) + zdqssed(1:ngrid,1:nq)
1442
1443	! Test water conservation
1444	if(watertest)then
1445	call planetwide_sumval(massarea(:,:)(zdqsed(:,:,igcm_h2o_vap)+zdqsed(:,:,igcm_h2o_ice))ptimestep/totarea_planet,dWtot)
1446	call planetwide_sumval((zdqssed(:,igcm_h2o_vap)+zdqssed(:,igcm_h2o_ice))cell_area(:)ptimestep/totarea_planet,dWtots)
1447	if (is_master) then
1448	print*,'In sedim atmospheric ice change =',dWtot,' kg m-2'
1449	print*,'In sedim surface ice change =',dWtots,' kg m-2'
1450	print*,'In sedim non-cons factor =',dWtot+dWtots,' kg m-2'
1451	endif
1452	endif
1453
1454	end if ! end of 'sedimentation'
1455
1456
1457	! ---------------
1458	! VI.3. Updates
1459	! ---------------
1460
1461	! Updating Atmospheric Mass and Tracers budgets.
1462	if(mass_redistrib) then
1463
1464	zdmassmr(1:ngrid,1:nlayer) = mass(1:ngrid,1:nlayer) * &
1465	( zdqevap(1:ngrid,1:nlayer) &
1466	+ zdqrain(1:ngrid,1:nlayer,igcm_h2o_vap) &
1467	+ dqmoist(1:ngrid,1:nlayer,igcm_h2o_vap) &
1468	+ dqvaplscale(1:ngrid,1:nlayer) )
1469
1470	do ig = 1, ngrid
1471	zdmassmr_col(ig)=SUM(zdmassmr(ig,1:nlayer))
1472	enddo
1473
1474	call writediagfi(ngrid,"mass_evap","mass gain"," ",3,zdmassmr)
1475	call writediagfi(ngrid,"mass_evap_col","mass gain col"," ",2,zdmassmr_col)
1476	call writediagfi(ngrid,"mass","mass","kg/m2",3,mass)
1477
1478	call mass_redistribution(ngrid,nlayer,nq,ptimestep, &
1479	rnat,capcal,pplay,pplev,pt,tsurf,pq,qsurf, &
1480	pu,pv,pdt,zdtsurf,pdq,pdu,pdv,zdmassmr, &
1481	zdtmr,zdtsurfmr,zdpsrfmr,zdumr,zdvmr,zdqmr,zdqsurfmr)
1482
1483	pdq(1:ngrid,1:nlayer,1:nq) = pdq(1:ngrid,1:nlayer,1:nq) + zdqmr(1:ngrid,1:nlayer,1:nq)
1484	dqsurf(1:ngrid,1:nq) = dqsurf(1:ngrid,1:nq) + zdqsurfmr(1:ngrid,1:nq)
1485	pdt(1:ngrid,1:nlayer) = pdt(1:ngrid,1:nlayer) + zdtmr(1:ngrid,1:nlayer)
1486	pdu(1:ngrid,1:nlayer) = pdu(1:ngrid,1:nlayer) + zdumr(1:ngrid,1:nlayer)
1487	pdv(1:ngrid,1:nlayer) = pdv(1:ngrid,1:nlayer) + zdvmr(1:ngrid,1:nlayer)
1488	pdpsrf(1:ngrid) = pdpsrf(1:ngrid) + zdpsrfmr(1:ngrid)
1489	zdtsurf(1:ngrid) = zdtsurf(1:ngrid) + zdtsurfmr(1:ngrid)
1490
1491	endif
1492
1493	! ------------------
1494	! VI.4. Slab Ocean
1495	! ------------------
1496
1497	if (ok_slab_ocean)then
1498
1499	do ig=1,ngrid
1500	qsurfint(:,igcm_h2o_ice)=qsurf(:,igcm_h2o_ice)
1501	enddo
1502
1503	call ocean_slab_ice(ptimestep, &
1504	ngrid, knindex, tsea_ice, fluxrad, &
1505	zdqssnow, qsurf(:,igcm_h2o_ice), &
1506	- zdqsdif(:,igcm_h2o_vap), &
1507	flux_sens_lat,tsea_ice, pctsrf_sic, &
1508	taux,tauy,icount)
1509
1510
1511	call ocean_slab_get_vars(ngrid,tslab, &
1512	sea_ice, flux_o, &
1513	flux_g, dt_hdiff, &
1514	dt_ekman)
1515
1516	do ig=1,ngrid
1517	if (nint(rnat(ig)).eq.1)then
1518	tslab(ig,1) = 0.
1519	tslab(ig,2) = 0.
1520	tsea_ice(ig) = 0.
1521	sea_ice(ig) = 0.
1522	pctsrf_sic(ig) = 0.
1523	qsurf(ig,igcm_h2o_ice) = qsurfint(ig,igcm_h2o_ice)
1524	endif
1525	enddo
1526
1527	endif ! end of 'ok_slab_ocean'
1528
1529	! -----------------------------
1530	! VI.5. Surface Tracer Update
1531	! -----------------------------
1532
1533	if(hydrology)then
1534
1535	call hydrol(ngrid,nq,ptimestep,rnat,tsurf,qsurf,dqsurf,dqs_hyd, &
1536	capcal,albedo,albedo_bareground, &
1537	albedo_snow_SPECTV,albedo_co2_ice_SPECTV, &
1538	mu0,zdtsurf,zdtsurf_hyd,hice,pctsrf_sic, &
1539	sea_ice)
1540
1541	zdtsurf(1:ngrid) = zdtsurf(1:ngrid) + zdtsurf_hyd(1:ngrid)
1542	dqsurf(1:ngrid,1:nq) = dqsurf(1:ngrid,1:nq) + dqs_hyd(1:ngrid,1:nq)
1543
1544	qsurf(1:ngrid,1:nq) = qsurf(1:ngrid,1:nq) + ptimestep*dqsurf(1:ngrid,1:nq)
1545
1546	! Test energy conservation
1547	if(enertest)then
1548	call planetwide_sumval(cell_area(:)capcal(:)zdtsurf_hyd(:)/totarea_planet,dEtots)
1549	if (is_master) print*,'In hydrol surface energy change =',dEtots,' W m-2'
1550	endif
1551
1552	! test water conservation
1553	if(watertest)then
1554	call planetwide_sumval(dqs_hyd(:,igcm_h2o_ice)cell_area(:)ptimestep/totarea_planet,dWtots)
1555	if (is_master) print*,'In hydrol surface ice change =',dWtots,' kg m-2'
1556	call planetwide_sumval(dqs_hyd(:,igcm_h2o_vap)cell_area(:)ptimestep/totarea_planet,dWtots)
1557	if (is_master) then
1558	print*,'In hydrol surface water change =',dWtots,' kg m-2'
1559	print*,'---------------------------------------------------------------'
1560	endif
1561	endif
1562
1563	else ! of if (hydrology)
1564
1565	qsurf(1:ngrid,1:nq) = qsurf(1:ngrid,1:nq) + ptimestep*dqsurf(1:ngrid,1:nq)
1566
1567	end if ! of if (hydrology)
1568
1569	! Add qsurf to qsurf_hist, which is what we save in diagfi.nc. At the same time, we set the water
1570	! content of ocean gridpoints back to zero, in order to avoid rounding errors in vdifc, rain.
1571	qsurf_hist(:,:) = qsurf(:,:)
1572
1573	if(ice_update)then
1574	ice_min(1:ngrid)=min(ice_min(1:ngrid),qsurf(1:ngrid,igcm_h2o_ice))
1575	endif
1576
1577	endif! end of if 'tracer'
1578
1579
1580	!------------------------------------------------
1581	! VII. Surface and sub-surface soil temperature
1582	!------------------------------------------------
1583
1584
1585	! Increment surface temperature
1586	if(ok_slab_ocean)then
1587	do ig=1,ngrid
1588	if (nint(rnat(ig)).eq.0)then
1589	zdtsurf(ig)= (tslab(ig,1) &
1590	+ pctsrf_sic(ig)*(tsea_ice(ig)-tslab(ig,1))-tsurf(ig))/ptimestep
1591	endif
1592	tsurf(ig)=tsurf(ig)+ptimestep*zdtsurf(ig)
1593	enddo
1594
1595	else
1596	tsurf(1:ngrid)=tsurf(1:ngrid)+ptimestep*zdtsurf(1:ngrid)
1597	endif ! end of 'ok_slab_ocean'
1598
1599
1600	! Compute soil temperatures and subsurface heat flux.
1601	if (callsoil) then
1602	call soil(ngrid,nsoilmx,.false.,lastcall,inertiedat, &
1603	ptimestep,tsurf,tsoil,capcal,fluxgrd)
1604	endif
1605
1606
1607	if (ok_slab_ocean) then
1608
1609	do ig=1,ngrid
1610
1611	fluxgrdocean(ig)=fluxgrd(ig)
1612	if (nint(rnat(ig)).eq.0) then
1613	capcal(ig)=capcalocean
1614	fluxgrd(ig)=0.
1615	fluxgrdocean(ig)=pctsrf_sic(ig)flux_g(ig)+(1-pctsrf_sic(ig))(dt_hdiff(ig,1)+dt_ekman(ig,1))
1616	do iq=1,nsoilmx
1617	tsoil(ig,iq)=tsurf(ig)
1618	enddo
1619	if (pctsrf_sic(ig).gt.0.5) then
1620	capcal(ig)=capcalseaice
1621	if (qsurf(ig,igcm_h2o_ice).gt.0.) then
1622	capcal(ig)=capcalsno
1623	endif
1624	endif
1625	endif
1626
1627	enddo
1628
1629	endif !end of 'ok_slab_ocean'
1630
1631
1632	! Test energy conservation
1633	if(enertest)then
1634	call planetwide_sumval(cell_area(:)capcal(:)zdtsurf(:)/totarea_planet,dEtots)
1635	if (is_master) print*,'Surface energy change =',dEtots,' W m-2'
1636	endif
1637
1638
1639	!---------------------------------------------------
1640	! VIII. Perform diagnostics and write output files
1641	!---------------------------------------------------
1642
1643	! Note : For output only: the actual model integration is performed in the dynamics.
1644
1645
1646
1647	! Temperature, zonal and meridional winds.
1648	zt(1:ngrid,1:nlayer) = pt(1:ngrid,1:nlayer) + pdt(1:ngrid,1:nlayer)*ptimestep
1649	zu(1:ngrid,1:nlayer) = pu(1:ngrid,1:nlayer) + pdu(1:ngrid,1:nlayer)*ptimestep
1650	zv(1:ngrid,1:nlayer) = pv(1:ngrid,1:nlayer) + pdv(1:ngrid,1:nlayer)*ptimestep
1651
1652	! Diagnostic.
1653	zdtdyn(1:ngrid,1:nlayer) = (pt(1:ngrid,1:nlayer)-ztprevious(1:ngrid,1:nlayer)) / ptimestep
1654	ztprevious(1:ngrid,1:nlayer) = zt(1:ngrid,1:nlayer)
1655
1656	zdudyn(1:ngrid,1:nlayer) = (pu(1:ngrid,1:nlayer)-zuprevious(1:ngrid,1:nlayer)) / ptimestep
1657	zuprevious(1:ngrid,1:nlayer) = zu(1:ngrid,1:nlayer)
1658
1659	if(firstcall)then
1660	zdtdyn(1:ngrid,1:nlayer)=0.0
1661	zdudyn(1:ngrid,1:nlayer)=0.0
1662	endif
1663
1664	! Dynamical heating diagnostic.
1665	do ig=1,ngrid
1666	fluxdyn(ig)= SUM(zdtdyn(ig,:) mass(ig,:))cpp
1667	enddo
1668
1669	! Tracers.
1670	zq(1:ngrid,1:nlayer,1:nq) = pq(1:ngrid,1:nlayer,1:nq) + pdq(1:ngrid,1:nlayer,1:nq)*ptimestep
1671
1672	! Surface pressure.
1673	ps(1:ngrid) = pplev(1:ngrid,1) + pdpsrf(1:ngrid)*ptimestep
1674
1675
1676
1677	! Surface and soil temperature information
1678	call planetwide_sumval(cell_area(:)*tsurf(:)/totarea_planet,Ts1)
1679	call planetwide_minval(tsurf(:),Ts2)
1680	call planetwide_maxval(tsurf(:),Ts3)
1681	if(callsoil)then
1682	TsS = SUM(cell_area(:)*tsoil(:,nsoilmx))/totarea ! mean temperature at bottom soil layer
1683	print*,' ave[Tsurf] min[Tsurf] max[Tsurf] ave[Tdeep]'
1684	print*,Ts1,Ts2,Ts3,TsS
1685	else
1686	if (is_master) then
1687	print*,' ave[Tsurf] min[Tsurf] max[Tsurf]'
1688	print*,Ts1,Ts2,Ts3
1689	endif
1690	end if
1691
1692
1693	! Check the energy balance of the simulation during the run
1694	if(corrk)then
1695
1696	call planetwide_sumval(cell_area(:)*fluxtop_dn(:)/totarea_planet,ISR)
1697	call planetwide_sumval(cell_area(:)*fluxabs_sw(:)/totarea_planet,ASR)
1698	call planetwide_sumval(cell_area(:)*fluxtop_lw(:)/totarea_planet,OLR)
1699	call planetwide_sumval(cell_area(:)*fluxgrd(:)/totarea_planet,GND)
1700	call planetwide_sumval(cell_area(:)*fluxdyn(:)/totarea_planet,DYN)
1701	do ig=1,ngrid
1702	if(fluxtop_dn(ig).lt.0.0)then
1703	print*,'fluxtop_dn has gone crazy'
1704	print*,'fluxtop_dn=',fluxtop_dn(ig)
1705	print*,'tau_col=',tau_col(ig)
1706	print*,'aerosol=',aerosol(ig,:,:)
1707	print*,'temp= ',pt(ig,:)
1708	print*,'pplay= ',pplay(ig,:)
1709	call abort
1710	endif
1711	end do
1712
1713	if(ngrid.eq.1)then
1714	DYN=0.0
1715	endif
1716
1717	if (is_master) then
1718	print*,' ISR ASR OLR GND DYN [W m^-2]'
1719	print*, ISR,ASR,OLR,GND,DYN
1720	endif
1721
1722	if(enertest .and. is_master)then
1723	print*,'SW flux/heating difference SW++ - ASR = ',dEtotSW+dEtotsSW-ASR,' W m-2'
1724	print*,'LW flux/heating difference LW++ - OLR = ',dEtotLW+dEtotsLW+OLR,' W m-2'
1725	print*,'LW energy balance LW++ + ASR = ',dEtotLW+dEtotsLW+ASR,' W m-2'
1726	endif
1727
1728	if(meanOLR .and. is_master)then
1729	if((ngrid.gt.1) .or. (mod(icount-1,ecritphy).eq.0))then
1730	! to record global radiative balance
1731	open(92,file="rad_bal.out",form='formatted',position='append')
1732	write(92,*) zday,ISR,ASR,OLR
1733	close(92)
1734	open(93,file="tem_bal.out",form='formatted',position='append')
1735	if(callsoil)then
1736	write(93,*) zday,Ts1,Ts2,Ts3,TsS
1737	else
1738	write(93,*) zday,Ts1,Ts2,Ts3
1739	endif
1740	close(93)
1741	endif
1742	endif
1743
1744	endif ! end of 'corrk'
1745
1746
1747	! Diagnostic to test radiative-convective timescales in code.
1748	if(testradtimes)then
1749	open(38,file="tau_phys.out",form='formatted',position='append')
1750	ig=1
1751	do l=1,nlayer
1752	write(38,*) -1./pdt(ig,l),pt(ig,l),pplay(ig,l)
1753	enddo
1754	close(38)
1755	print*,'As testradtimes enabled,'
1756	print*,'exiting physics on first call'
1757	call abort
1758	endif
1759
1760
1761	! Compute column amounts (kg m-2) if tracers are enabled.
1762	if(tracer)then
1763	qcol(1:ngrid,1:nq)=0.0
1764	do iq=1,nq
1765	do ig=1,ngrid
1766	qcol(ig,iq) = SUM( zq(ig,1:nlayer,iq) * mass(ig,1:nlayer))
1767	enddo
1768	enddo
1769
1770	! Generalised for arbitrary aerosols now. By LK
1771	reffcol(1:ngrid,1:naerkind)=0.0
1772	if(co2cond.and.(iaero_co2.ne.0))then
1773	call co2_reffrad(ngrid,nlayer,nq,zq,reffrad(1,1,iaero_co2))
1774	do ig=1,ngrid
1775	reffcol(ig,iaero_co2) = SUM(zq(ig,1:nlayer,igcm_co2_ice)reffrad(ig,1:nlayer,iaero_co2)mass(ig,1:nlayer))
1776	enddo
1777	endif
1778	if(water.and.(iaero_h2o.ne.0))then
1779	call h2o_reffrad(ngrid,nlayer,zq(1,1,igcm_h2o_ice),zt, &
1780	reffrad(1,1,iaero_h2o),nueffrad(1,1,iaero_h2o))
1781	do ig=1,ngrid
1782	reffcol(ig,iaero_h2o) = SUM(zq(ig,1:nlayer,igcm_h2o_ice)reffrad(ig,1:nlayer,iaero_h2o)mass(ig,1:nlayer))
1783	enddo
1784	endif
1785
1786	endif ! end of 'tracer'
1787
1788
1789	! Test for water conservation.
1790	if(water)then
1791
1792	call planetwide_sumval(cell_area(:)*qsurf_hist(:,igcm_h2o_ice)/totarea_planet,icesrf)
1793	call planetwide_sumval(cell_area(:)*qsurf_hist(:,igcm_h2o_vap)/totarea_planet,liqsrf)
1794	call planetwide_sumval(cell_area(:)*qcol(:,igcm_h2o_ice)/totarea_planet,icecol)
1795	call planetwide_sumval(cell_area(:)*qcol(:,igcm_h2o_vap)/totarea_planet,vapcol)
1796
1797	h2otot = icesrf + liqsrf + icecol + vapcol
1798
1799	if (is_master) then
1800	print*,' Total water amount [kg m^-2]: ',h2otot
1801	print*,' Surface ice Surface liq. Atmos. con. Atmos. vap. [kg m^-2] '
1802	print*, icesrf,liqsrf,icecol,vapcol
1803	endif
1804
1805	if(meanOLR .and. is_master)then
1806	if((ngrid.gt.1) .or. (mod(icount-1,ecritphy).eq.0))then
1807	! to record global water balance
1808	open(98,file="h2o_bal.out",form='formatted',position='append')
1809	write(98,*) zday,icesrf,liqsrf,icecol,vapcol
1810	close(98)
1811	endif
1812	endif
1813
1814	endif
1815
1816
1817	! Calculate RH (Relative Humidity) for diagnostic.
1818	if(water)then
1819
1820	do l = 1, nlayer
1821	do ig=1,ngrid
1822	call Psat_water(zt(ig,l),pplay(ig,l),psat_tmp,qsat(ig,l))
1823	RH(ig,l) = zq(ig,l,igcm_h2o_vap) / qsat(ig,l)
1824	enddo
1825	enddo
1826
1827	! Compute maximum possible H2O column amount (100% saturation).
1828	do ig=1,ngrid
1829	H2Omaxcol(ig) = SUM( qsat(ig,:) * mass(ig,:))
1830	enddo
1831
1832	endif ! end of 'water'
1833
1834
1835	print,'--> Ls =',zls180./pi
1836
1837
1838	!----------------------------------------------------------------------
1839	! Writing NetCDF file "RESTARTFI" at the end of the run
1840	!----------------------------------------------------------------------
1841
1842	! Note: 'restartfi' is stored just before dynamics are stored
1843	! in 'restart'. Between now and the writting of 'restart',
1844	! there will have been the itau=itau+1 instruction and
1845	! a reset of 'time' (lastacll = .true. when itau+1= itaufin)
1846	! thus we store for time=time+dtvr
1847
1848
1849
1850	if(lastcall) then
1851	ztime_fin = ptime + ptimestep/(float(iphysiq)*daysec)
1852
1853	! Update surface ice distribution to iterate to steady state if requested
1854	if(ice_update)then
1855
1856	do ig=1,ngrid
1857
1858	delta_ice = (qsurf(ig,igcm_h2o_ice)-ice_initial(ig))
1859
1860	! add multiple years of evolution
1861	qsurf_hist(ig,igcm_h2o_ice) = qsurf_hist(ig,igcm_h2o_ice) + delta_ice*icetstep
1862
1863	! if ice has gone -ve, set to zero
1864	if(qsurf_hist(ig,igcm_h2o_ice).lt.0.0)then
1865	qsurf_hist(ig,igcm_h2o_ice) = 0.0
1866	endif
1867
1868	! if ice is seasonal, set to zero (NEW)
1869	if(ice_min(ig).lt.0.01)then
1870	qsurf_hist(ig,igcm_h2o_ice) = 0.0
1871	endif
1872
1873	enddo
1874
1875	! enforce ice conservation
1876	ice_tot= SUM(qsurf_hist(:,igcm_h2o_ice)*cell_area(:) )/SUM(cell_area(:))
1877	qsurf_hist(:,igcm_h2o_ice) = qsurf_hist(:,igcm_h2o_ice)*(icesrf/ice_tot)
1878
1879	endif
1880
1881	if (ngrid.ne.1) then
1882	write(,)'PHYSIQ: for physdem ztime_fin =',ztime_fin
1883
1884	call physdem1("restartfi.nc",nsoilmx,ngrid,nlayer,nq, &
1885	ptimestep,ztime_fin, &
1886	tsurf,tsoil,emis,q2,qsurf_hist, &
1887	cloudfrac,totcloudfrac,hice, &
1888	rnat,pctsrf_sic,tslab,tsea_ice,sea_ice)
1889	endif
1890
1891	if(ok_slab_ocean) then
1892	call ocean_slab_final!(tslab, seaice)
1893	end if
1894
1895
1896	endif ! end of 'lastcall'
1897
1898
1899	!-----------------------------------
1900	! Saving statistics :
1901	!-----------------------------------
1902
1903	! Note :("stats" stores and accumulates 8 key variables in file "stats.nc"
1904	! which can later be used to make the statistic files of the run:
1905	! "stats") only possible in 3D runs !!!
1906
1907
1908	if (callstats) then
1909
1910	call wstats(ngrid,"ps","Surface pressure","Pa",2,ps)
1911	call wstats(ngrid,"tsurf","Surface temperature","K",2,tsurf)
1912	call wstats(ngrid,"fluxsurf_lw", &
1913	"Thermal IR radiative flux to surface","W.m-2",2, &
1914	fluxsurf_lw)
1915	call wstats(ngrid,"fluxtop_lw", &
1916	"Thermal IR radiative flux to space","W.m-2",2, &
1917	fluxtop_lw)
1918
1919	! call wstats(ngrid,"fluxsurf_sw", &
1920	! "Solar radiative flux to surface","W.m-2",2, &
1921	! fluxsurf_sw_tot)
1922	! call wstats(ngrid,"fluxtop_sw", &
1923	! "Solar radiative flux to space","W.m-2",2, &
1924	! fluxtop_sw_tot)
1925
1926
1927	call wstats(ngrid,"ISR","incoming stellar rad.","W m-2",2,fluxtop_dn)
1928	call wstats(ngrid,"ASR","absorbed stellar rad.","W m-2",2,fluxabs_sw)
1929	call wstats(ngrid,"OLR","outgoing longwave rad.","W m-2",2,fluxtop_lw)
1930	!call wstats(ngrid,"ALB","Surface albedo"," ",2,albedo_equivalent)
1931	!call wstats(ngrid,"ALB_1st","First Band Surface albedo"," ",2,albedo(:,1))
1932	call wstats(ngrid,"p","Pressure","Pa",3,pplay)
1933	call wstats(ngrid,"temp","Atmospheric temperature","K",3,zt)
1934	call wstats(ngrid,"u","Zonal (East-West) wind","m.s-1",3,zu)
1935	call wstats(ngrid,"v","Meridional (North-South) wind","m.s-1",3,zv)
1936	call wstats(ngrid,"w","Vertical (down-up) wind","m.s-1",3,pw)
1937	call wstats(ngrid,"q2","Boundary layer eddy kinetic energy","m2.s-2",3,q2)
1938
1939	if (tracer) then
1940	do iq=1,nq
1941	call wstats(ngrid,noms(iq),noms(iq),'kg/kg',3,zq(1,1,iq))
1942	call wstats(ngrid,trim(noms(iq))//'_surf',trim(noms(iq))//'_surf', &
1943	'kg m^-2',2,qsurf(1,iq) )
1944	call wstats(ngrid,trim(noms(iq))//'_col',trim(noms(iq))//'_col', &
1945	'kg m^-2',2,qcol(1,iq) )
1946
1947	! call wstats(ngrid,trim(noms(iq))//'_reff', &
1948	! trim(noms(iq))//'_reff', &
1949	! 'm',3,reffrad(1,1,iq))
1950
1951	end do
1952
1953	if (water) then
1954	vmr=zq(1:ngrid,1:nlayer,igcm_h2o_vap)*mugaz/mmol(igcm_h2o_vap)
1955	call wstats(ngrid,"vmr_h2ovapor", &
1956	"H2O vapour volume mixing ratio","mol/mol", &
1957	3,vmr)
1958	endif
1959
1960	endif ! end of 'tracer'
1961
1962	if(watercond.and.CLFvarying)then
1963	call wstats(ngrid,"rneb_man","H2O cloud fraction (conv)"," ",3,rneb_man)
1964	call wstats(ngrid,"rneb_lsc","H2O cloud fraction (large scale)"," ",3,rneb_lsc)
1965	call wstats(ngrid,"CLF","H2O cloud fraction"," ",3,cloudfrac)
1966	call wstats(ngrid,"CLFt","H2O column cloud fraction"," ",2,totcloudfrac)
1967	call wstats(ngrid,"RH","relative humidity"," ",3,RH)
1968	endif
1969
1970	if (ok_slab_ocean) then
1971	call wstats(ngrid,"dt_hdiff1","dt_hdiff1","K/s",2,dt_hdiff(:,1))
1972	call wstats(ngrid,"dt_hdiff2","dt_hdiff2","K/s",2,dt_hdiff(:,2))
1973	call wstats(ngrid,"dt_ekman1","dt_ekman1","K/s",2,dt_ekman(:,1))
1974	call wstats(ngrid,"dt_ekman2","dt_ekman2","K/s",2,dt_ekman(:,2))
1975	call wstats(ngrid,"tslab1","tslab1","K",2,tslab(:,1))
1976	call wstats(ngrid,"tslab2","tslab2","K",2,tslab(:,2))
1977	call wstats(ngrid,"pctsrf_sic","pct ice/sea","",2,pctsrf_sic)
1978	call wstats(ngrid,"tsea_ice","tsea_ice","K",2,tsea_ice)
1979	call wstats(ngrid,"sea_ice","sea ice","kg/m2",2,sea_ice)
1980	call wstats(ngrid,"rnat","nature of the surface","",2,rnat)
1981	endif
1982
1983	if(lastcall) then
1984	write (,) "Writing stats..."
1985	call mkstats(ierr)
1986	endif
1987
1988	endif ! end of 'callstats'
1989
1990
1991	!-----------------------------------------------------------------------------------------------------
1992	! OUTPUT in netcdf file "DIAGFI.NC", containing any variable for diagnostic
1993	!
1994	! Note 1 : output with period "ecritphy", set in "run.def"
1995	!
1996	! Note 2 : writediagfi can also be called from any other subroutine for any variable,
1997	! but its preferable to keep all the calls in one place ...
1998	!-----------------------------------------------------------------------------------------------------
1999
2000
2001	call writediagfi(ngrid,"Ls","solar longitude","deg",0,zls*180./pi)
2002	call writediagfi(ngrid,"Lss","sub solar longitude","deg",0,zlss*180./pi)
2003	call writediagfi(ngrid,"RA","right ascension","deg",0,right_ascen*180./pi)
2004	call writediagfi(ngrid,"Declin","solar declination","deg",0,declin*180./pi)
2005	call writediagfi(ngrid,"tsurf","Surface temperature","K",2,tsurf)
2006	call writediagfi(ngrid,"ps","Surface pressure","Pa",2,ps)
2007	call writediagfi(ngrid,"temp","temperature","K",3,zt)
2008	call writediagfi(ngrid,"teta","potential temperature","K",3,zh)
2009	call writediagfi(ngrid,"u","Zonal wind","m.s-1",3,zu)
2010	call writediagfi(ngrid,"v","Meridional wind","m.s-1",3,zv)
2011	call writediagfi(ngrid,"w","Vertical wind","m.s-1",3,pw)
2012	call writediagfi(ngrid,"p","Pressure","Pa",3,pplay)
2013
2014	! Subsurface temperatures
2015	! call writediagsoil(ngrid,"tsurf","Surface temperature","K",2,tsurf)
2016	! call writediagsoil(ngrid,"temp","temperature","K",3,tsoil)
2017
2018	! Oceanic layers
2019	if(ok_slab_ocean) then
2020	call writediagfi(ngrid,"pctsrf_sic","pct ice/sea","",2,pctsrf_sic)
2021	call writediagfi(ngrid,"tsea_ice","tsea_ice","K",2,tsea_ice)
2022	call writediagfi(ngrid,"sea_ice","sea ice","kg/m2",2,sea_ice)
2023	call writediagfi(ngrid,"tslab1","tslab1","K",2,tslab(:,1))
2024	call writediagfi(ngrid,"tslab2","tslab2","K",2,tslab(:,2))
2025	call writediagfi(ngrid,"dt_hdiff1","dt_hdiff1","K/s",2,dt_hdiff(:,1))
2026	call writediagfi(ngrid,"dt_hdiff2","dt_hdiff2","K/s",2,dt_hdiff(:,2))
2027	call writediagfi(ngrid,"dt_ekman1","dt_ekman1","K/s",2,dt_ekman(:,1))
2028	call writediagfi(ngrid,"dt_ekman2","dt_ekman2","K/s",2,dt_ekman(:,2))
2029	call writediagfi(ngrid,"rnat","nature of the surface","",2,rnat)
2030	call writediagfi(ngrid,"sensibFlux","sensible heat flux","w.m^-2",2,sensibFlux)
2031	call writediagfi(ngrid,"latentFlux","latent heat flux","w.m^-2",2,zdqsdif(:,igcm_h2o_vap)*RLVTT)
2032	endif
2033
2034
2035	! Total energy balance diagnostics
2036	if(callrad.and.(.not.newtonian))then
2037
2038	!call writediagfi(ngrid,"ALB","Surface albedo"," ",2,albedo_equivalent)
2039	!call writediagfi(ngrid,"ALB_1st","First Band Surface albedo"," ",2,albedo(:,1))
2040	call writediagfi(ngrid,"ISR","incoming stellar rad.","W m-2",2,fluxtop_dn)
2041	call writediagfi(ngrid,"ASR","absorbed stellar rad.","W m-2",2,fluxabs_sw)
2042	call writediagfi(ngrid,"OLR","outgoing longwave rad.","W m-2",2,fluxtop_lw)
2043	call writediagfi(ngrid,"shad","rings"," ", 2, fract)
2044
2045	! call writediagfi(ngrid,"ASRcs","absorbed stellar rad (cs).","W m-2",2,fluxabs_sw1)
2046	! call writediagfi(ngrid,"OLRcs","outgoing longwave rad (cs).","W m-2",2,fluxtop_lw1)
2047	! call writediagfi(ngrid,"fluxsurfsw","sw surface flux.","W m-2",2,fluxsurf_sw)
2048	! call writediagfi(ngrid,"fluxsurflw","lw back radiation.","W m-2",2,fluxsurf_lw)
2049	! call writediagfi(ngrid,"fluxsurfswcs","sw surface flux (cs).","W m-2",2,fluxsurf_sw1)
2050	! call writediagfi(ngrid,"fluxsurflwcs","lw back radiation (cs).","W m-2",2,fluxsurf_lw1)
2051
2052	if(ok_slab_ocean) then
2053	call writediagfi(ngrid,"GND","heat flux from ground","W m-2",2,fluxgrdocean)
2054	else
2055	call writediagfi(ngrid,"GND","heat flux from ground","W m-2",2,fluxgrd)
2056	endif
2057
2058	call writediagfi(ngrid,"DYN","dynamical heat input","W m-2",2,fluxdyn)
2059
2060	endif ! end of 'callrad'
2061
2062	if(enertest) then
2063
2064	if (calldifv) then
2065
2066	call writediagfi(ngrid,"q2","turbulent kinetic energy","J.kg^-1",3,q2)
2067	call writediagfi(ngrid,"sensibFlux","sensible heat flux","w.m^-2",2,sensibFlux)
2068
2069	! call writediagfi(ngrid,"dEzdiff","turbulent diffusion heating (-sensible flux)","w.m^-2",3,dEzdiff)
2070	! call writediagfi(ngrid,"dEdiff","integrated turbulent diffusion heating (-sensible flux)","w.m^-2",2,dEdiff)
2071	! call writediagfi(ngrid,"dEdiffs","In TurbDiff (correc rad+latent heat) surf nrj change","w.m^-2",2,dEdiffs)
2072
2073	endif
2074
2075	if (corrk) then
2076	call writediagfi(ngrid,"dEzradsw","radiative heating","w.m^-2",3,dEzradsw)
2077	call writediagfi(ngrid,"dEzradlw","radiative heating","w.m^-2",3,dEzradlw)
2078	endif
2079
2080	if(watercond) then
2081
2082	call writediagfi(ngrid,"lscaledE","heat from largescale","W m-2",2,lscaledE)
2083	call writediagfi(ngrid,"madjdE","heat from moistadj","W m-2",2,madjdE)
2084	call writediagfi(ngrid,"qsatatm","atm qsat"," ",3,qsat)
2085
2086	! call writediagfi(ngrid,"lscaledEz","heat from largescale","W m-2",3,lscaledEz)
2087	! call writediagfi(ngrid,"madjdEz","heat from moistadj","W m-2",3,madjdEz)
2088	! call writediagfi(ngrid,"h2o_max_col","maximum H2O column amount","kg.m^-2",2,H2Omaxcol)
2089
2090	endif
2091
2092	endif ! end of 'enertest'
2093
2094
2095	! Temporary inclusions for heating diagnostics.
2096	!call writediagfi(ngrid,"zdtsw","SW heating","T s-1",3,zdtsw)
2097	!call writediagfi(ngrid,"zdtlw","LW heating","T s-1",3,zdtlw)
2098	!call writediagfi(ngrid,"dtrad","radiative heating","K s-1",3,dtrad)
2099	! call writediagfi(ngrid,"zdtdyn","Dyn. heating","T s-1",3,zdtdyn)
2100
2101	! For Debugging.
2102	!call writediagfi(ngrid,'rnat','Terrain type',' ',2,real(rnat))
2103	!call writediagfi(ngrid,'pphi','Geopotential',' ',3,pphi)
2104
2105
2106	! Output aerosols.
2107	if (igcm_co2_ice.ne.0.and.iaero_co2.ne.0) &
2108	call writediagfi(ngrid,'CO2ice_reff','CO2ice_reff','m',3,reffrad(1,1,iaero_co2))
2109	if (igcm_h2o_ice.ne.0.and.iaero_h2o.ne.0) &
2110	call writediagfi(ngrid,'H2Oice_reff','H2Oice_reff','m',3,reffrad(:,:,iaero_h2o))
2111	if (igcm_co2_ice.ne.0.and.iaero_co2.ne.0) &
2112	call writediagfi(ngrid,'CO2ice_reffcol','CO2ice_reffcol','um kg m^-2',2,reffcol(1,iaero_co2))
2113	if (igcm_h2o_ice.ne.0.and.iaero_h2o.ne.0) &
2114	call writediagfi(ngrid,'H2Oice_reffcol','H2Oice_reffcol','um kg m^-2',2,reffcol(1,iaero_h2o))
2115
2116	! Output tracers.
2117	if (tracer) then
2118
2119	do iq=1,nq
2120	call writediagfi(ngrid,noms(iq),noms(iq),'kg/kg',3,zq(1,1,iq))
2121	call writediagfi(ngrid,trim(noms(iq))//'_surf',trim(noms(iq))//'_surf', &
2122	'kg m^-2',2,qsurf_hist(1,iq) )
2123	call writediagfi(ngrid,trim(noms(iq))//'_col',trim(noms(iq))//'_col', &
2124	'kg m^-2',2,qcol(1,iq) )
2125
2126	! call writediagfi(ngrid,trim(noms(iq))//'_surf',trim(noms(iq))//'_surf', &
2127	! 'kg m^-2',2,qsurf(1,iq) )
2128
2129	if(watercond.or.CLFvarying)then
2130	call writediagfi(ngrid,"rneb_man","H2O cloud fraction (conv)"," ",3,rneb_man)
2131	call writediagfi(ngrid,"rneb_lsc","H2O cloud fraction (large scale)"," ",3,rneb_lsc)
2132	call writediagfi(ngrid,"CLF","H2O cloud fraction"," ",3,cloudfrac)
2133	call writediagfi(ngrid,"CLFt","H2O column cloud fraction"," ",2,totcloudfrac)
2134	call writediagfi(ngrid,"RH","relative humidity"," ",3,RH)
2135	endif
2136
2137	if(waterrain)then
2138	call writediagfi(ngrid,"rain","rainfall","kg m-2 s-1",2,zdqsrain)
2139	call writediagfi(ngrid,"snow","snowfall","kg m-2 s-1",2,zdqssnow)
2140	endif
2141
2142	if((hydrology).and.(.not.ok_slab_ocean))then
2143	call writediagfi(ngrid,"hice","oceanic ice height","m",2,hice)
2144	endif
2145
2146	if(ice_update)then
2147	call writediagfi(ngrid,"ice_min","min annual ice","m",2,ice_min)
2148	call writediagfi(ngrid,"ice_ini","initial annual ice","m",2,ice_initial)
2149	endif
2150
2151	do ig=1,ngrid
2152	if(tau_col(ig).gt.1.e3)then
2153	print*,'WARNING: tau_col=',tau_col(ig)
2154	print*,'at ig=',ig,'in PHYSIQ'
2155	endif
2156	end do
2157
2158	call writediagfi(ngrid,"tau_col","Total aerosol optical depth","[]",2,tau_col)
2159
2160	enddo ! end of 'nq' loop
2161
2162	endif ! end of 'tracer'
2163
2164
2165	! Output spectrum.
2166	if(specOLR.and.corrk)then
2167	call writediagspecIR(ngrid,"OLR3D","OLR(lon,lat,band)","W/m^2/cm^-1",3,OLR_nu)
2168	call writediagspecVI(ngrid,"OSR3D","OSR(lon,lat,band)","W/m^2/cm^-1",3,OSR_nu)
2169	endif
2170
2171	! XIOS outputs
2172	#ifdef CPP_XIOS
2173	! Send fields to XIOS: (NB these fields must also be defined as
2174	! <field id="..." /> in context_lmdz_physics.xml to be correctly used)
2175	CALL send_xios_field("ls",zls)
2176
2177	CALL send_xios_field("ps",ps)
2178	CALL send_xios_field("area",cell_area)
2179
2180	CALL send_xios_field("temperature",zt)
2181	CALL send_xios_field("u",zu)
2182	CALL send_xios_field("v",zv)
2183
2184	#endif
2185
2186	icount=icount+1
2187
2188	end subroutine physiq
2189
2190	end module physiq_mod

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