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makelmdz_fcm @ 3522

Last change on this file since 3522 was 3499, checked in by afalco, 2 weeks ago
libphy compilation: fixed a few pathes for compilation with dynamico & others. Removing lock when fail. Allows for user to re-run compilation without the warning "ATTENTION... you might be already compiling" AF
File size: 23.6 KB

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1	#!/bin/bash
2	# $Id: makelmdz_fcm 1615 2012-02-10 15:42:26Z emillour $
3	# This is a script in Bash to compile the GCM and related tools
4	#
5	##set -x
6	set -e
7	########################################################################
8	# options par defaut pour la commande make
9	########################################################################
10
11	dim="96x72x19"
12	physique=lmd
13	filtre=filtrez
14	grille=reg
15	couple=false
16	veget=false
17	sisvat=false
18	rrtm=false
19	dust=false
20	strataer=false
21	chimie=false
22	chemistry=false
23	parallel=none
24	paramem="par"
25	compil_mod=prod
26	io=ioipsl
27	LIBPREFIX=""
28	cosp=false
29	bands=""
30	scatterers=""
31	job=1
32	full=''
33	libphy=false
34
35	arch_defined="FALSE"
36	arch_path="arch"
37	arch_default_path="arch"
38
39	LMDGCM=`/bin/pwd`
40	LIBOGCM=$LMDGCM/libo
41	LIBFGCM=$LMDGCM/libf
42	DYN_COMMON_PATH=$LIBFGCM/dyn3d_common
43	# path for optional packages, but default set to ".void_dir"
44	FILTRE_PATH=$LMDGCM/.void_dir
45	DYN_PHYS_PATH=$LMDGCM/.void_dir
46	DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir
47	PHY_COMMON_PATH=$LMDGCM/.void_dir
48	RRTM_PATH=$LMDGCM/.void_dir
49	DUST_PATH=$LMDGCM/.void_dir
50	STRATAER_PATH=$LMDGCM/.void_dir
51	SISVAT_PATH=$LMDGCM/.void_dir
52	COSP_PATH=$LMDGCM/.void_dir
53	CHEM_PATH=$LMDGCM/.void_dir
54	CLOUD_PATH=$LMDGCM/.void_dir
55	MUPHY_PATH=$LMDGCM/.void_dir
56	AERONO_PATH=$LMDGCM/.void_dir
57	EVOLUTION_PATH=$LMDGCM/.void_dir
58	# Path to fcm utility:
59	##fcm_path=$LMDGCM/tools/fcm/bin
60	##fcm_path=/planeto/mturbet/planeto2-mturbet/FCM_V1.2/bin
61	fcm_path=$(dirname $(which fcm))
62
63	########################################################################
64	# Quelques initialisations de variables du shell.
65	########################################################################
66
67	CPP_KEY=""
68	INCLUDE_DIR=""
69	LIB=""
70	adjnt=""
71	COMPIL_FFLAGS="%PROD_FFLAGS"
72	PARA_FFLAGS=""
73	PARA_LD=""
74	EXT_SRC=""
75
76	########################################################################
77	# lecture des options de mymake
78	########################################################################
79
80	while (($# > 0))
81	do
82	case $1 in
83	"-h") cat <<fin
84	Usage :
85	makelmdz_fcm [options] -arch arch_name exec
86	[-h] : brief help
87	[-d [[IMx]JMx]LM] : IM, JM, LM are the dimensions in x, y, z (default: $dim)
88	[-s nscat] : (Generic) Number of radiatively active scatterers
89	[-b IRxVIS] : (Generic) Number of infrared (IR) and visible (VIS) bands for radiative transfer
90	[-p PHYS] : set of physical parametrizations (in libf/phyPHYS), (default: lmd)
91	[-prod / -dev / -debug] : compilation mode production (default) / developement / debug .
92	[-c false/MPI1/OMCT] : (Earth) coupling with ocean model : MPI1/OMCT/false (default: false)
93	[-v false/orchidee2.0/orchidee1.9/true] : (Earth) version of the vegetation model to include (default: false)
94	false : no vegetation model
95	orchidee2.0 : compile using ORCHIDEE 2.0 (or more recent version)
96	orchidee1.9 : compile using ORCHIDEE up to the version including OpenMP in ORCHIDEE : tag 1.9-1.9.5(version AR5)-1.9.6
97	true : (obsolete; for backward compatibility) use ORCHIDEE tag 1.9-1.9.6
98	[-chimie INCA/false] : (Earth) with INCA chemistry model or without (default: false)
99	[-cosp true/false] : (Earth) add the cosp model (default: false)
100	[-sisvat true/false] : (Earth) compile with/without sisvat package (default: false)
101	[-rrtm true/false] : (Earth) compile with/without rrtm package (default: false)
102	[-dust true/false] : (Earth) compile with/without the dust package by Boucher and co (default: false)
103	[-strataer true/false] : (Earth) compile with/without the strat aer package by Boucher and co (default: false)
104	[-parallel none/mpi/omp/mpi_omp] : parallelism (default: none) : mpi, openmp or mixted mpi_openmp
105	[-g GRI] : grid configuration in dyn3d/GRI_xy.h (default: reg, inclues a zoom)
106	[-io ioipsl/mix/xios] : Input/Output library (default: ioipsl)
107	[-include INCLUDES] : extra include path to add
108	[-cpp CPP_KEY] : additional preprocessing definitions
109	[-adjnt] : adjoint model, not operational ...
110	[-mem] : reduced memory dynamics (if in parallel mode)
111	[-filtre NOMFILTRE] : use filtre from libf/NOMFILTRE (default: filtrez)
112	[-link LINKS] : additional links with other libraries
113	[-j n] : active parallel compiling on ntask
114	[-full] : full (re-)compilation (from scratch)
115	[-libphy] : only compile physics package (no dynamics or main program)
116	[-fcm_path path] : path to the fcm tool (default: tools/fcm/bin)
117	[-ext_src path] : path to an additional set of routines to compile with the model
118	[-arch_path path] : path to architecture files (default: $arch_default_path)
119	-arch arch : target architecture
120	exec : executable to build
121	fin
122	exit;;
123
124	"-d")
125	dim=$2 ; shift ; shift ;;
126
127	"-p")
128	physique="$2" ; shift ; shift ;;
129
130	"-s")
131	scatterers=$2 ; shift ; shift ;;
132
133	"-b")
134	bands=$2 ; shift ; shift ;;
135
136	"-g")
137	grille="$2" ; shift ; shift ;;
138
139	"-c")
140	couple="$2" ; shift ; shift ;;
141
142	"-prod")
143	compil_mod="prod" ; shift ;;
144
145	"-dev")
146	compil_mod="dev" ; shift ;;
147
148	"-debug")
149	compil_mod="debug" ; shift ;;
150
151	"-io")
152	io="$2" ; shift ; shift ;;
153
154	"-v")
155	veget="$2" ; shift ; shift ;;
156
157	"-sisvat")
158	sisvat="$2" ; shift ; shift ;;
159
160	"-rrtm")
161	rrtm="$2" ; shift ; shift ;;
162
163	"-dust")
164	dust="$2" ; shift ; shift ;;
165
166	"-strataer")
167	strataer="$2" ; shift ; shift ;;
168
169	"-chimie")
170	chimie="$2" ; shift ; shift ;;
171
172	"-parallel")
173	parallel="$2" ; shift ; shift ;;
174
175	"-include")
176	INCLUDE_DIR="$INCLUDE_DIR -I$2" ; shift ; shift ;;
177
178	"-cpp")
179	CPP_KEY="$CPP_KEY $2" ; shift ; shift ;;
180
181	"-adjnt")
182	echo "not operational ... work to be done here ";exit 1
183	opt_dep="$opt_dep adjnt" ; adjnt="-ladjnt -ldyn3d "
184	optim="$optim -Dadj" ; shift ;;
185
186	"-cosp")
187	cosp="$2" ; shift ; shift ;;
188
189	"-mem")
190	paramem="mem" ; shift ;;
191
192	"-filtre")
193	filtre=$2 ; shift ; shift ;;
194
195	"-link")
196	LIB="$LIB $2" ; shift ; shift ;;
197
198	"-fcm_path")
199	fcm_path=$2 ; shift ; shift ;;
200
201	"-ext_src")
202	EXT_SRC=$2 ; shift ; shift ;;
203
204	"-j")
205	job=$2 ; shift ; shift ;;
206
207	"-full")
208	full="-full" ; shift ;;
209
210	"-libphy")
211	libphy="true" ; shift ;;
212
213	"-arch")
214	arch=$2 ; arch_defined="TRUE" ; shift ; shift ;;
215
216	"-arch_path")
217	arch_path=$2 ; arch_path_defined="TRUE"; shift ; shift ;;
218
219	*)
220	code="$1" ; shift ;;
221	esac
222	done
223
224	###############################################################
225	# path to fcm
226	###############################################################
227	# handle case when provided path to fcm was given as a relative
228	# path (from makelmdz_fcm script directory) and not an absolute path
229	if [[ ${fcm_path:0:1} != "/" ]] ; then
230	# prepend with makelmdz_fcm location
231	fcm_path=$(cd $(dirname $0) ; pwd)"/"${fcm_path}
232	fi
233
234	# add fcm_path to PATH
235	export PATH=${fcm_path}:${PATH}
236
237	echo "Path to fcm:"
238	echo ${fcm_path}
239
240	#################################
241	# setup arch.env and arch.path #
242	#################################
243	rm -f .void_file
244	echo > .void_file
245	rm -rf .void_dir
246	mkdir .void_dir
247
248	if [[ "$arch_defined" == "TRUE" ]]
249	then
250	rm -f arch.path
251	rm -f arch.env
252
253	if test -f $arch_path/arch-${arch}.path
254	then
255	ln -s $arch_path/arch-${arch}.path arch.path
256	elif test -f $arch_default_path/arch-${arch}.path
257	then
258	ln -s $arch_default_path/arch-${arch}.path arch.path
259	fi
260
261	if test -f $arch_path/arch-${arch}.env
262	then
263	ln -s $arch_path/arch-${arch}.env arch.env
264	elif test -f $arch_default_path/arch-${arch}.env
265	then
266	ln -s $arch_default_path/arch-${arch}.env arch.env
267	else
268	ln -s .void_file arch.env
269	fi
270	# source architecture PATH and ENV files
271	source arch.env
272	source arch.path
273	else
274	echo "You must define a target architecture"
275	exit 1
276	fi
277
278	########################################################################
279	# Definition des clefs CPP, des chemins des includes et modules
280	# et des libraries
281	########################################################################
282
283	if [[ "$compil_mod" == "prod" ]]
284	then
285	COMPIL_FFLAGS="%PROD_FFLAGS"
286	elif [[ "$compil_mod" == "dev" ]]
287	then
288	COMPIL_FFLAGS="%DEV_FFLAGS"
289	elif [[ "$compil_mod" == "debug" ]]
290	then
291	COMPIL_FFLAGS="%DEBUG_FFLAGS"
292	fi
293
294	phys_root=$physique
295	if [[ "${physique:0:3}" == "lmd" ]] ; then phys_root=lmd ; fi
296	if [[ "${physique:0:3}" == "mar" ]] ; then phys_root=mar ; fi
297	if [[ "${physique:0:4}" == "mars" ]] ; then phys_root=mars ; fi
298	if [[ "${physique:0:3}" == "std" ]] ; then phys_root=std ; fi
299	if [[ "${physique:0:5}" == "venus" ]] ; then phys_root=venus ; fi
300	if [[ "${physique:0:5}" == "titan" ]] ; then phys_root=titan ; fi
301	if [[ "${physique:0:3}" == "dev" ]] ; then phys_root=dev ; fi
302
303	if [[ "$physique" != "nophys" ]]
304	then
305	#We'll use some physics
306	CPP_KEY="$CPP_KEY CPP_PHYS"
307	if [[ "${phys_root}" == "lmd" ]]
308	then
309	#For lmd physics, default planet type is Earth
310	CPP_KEY="$CPP_KEY CPP_EARTH"
311	fi
312	# set physics common utilities path
313	PHY_COMMON_PATH="${LIBFGCM}/phy_common"
314	# set the dyn/phys interface path
315	DYN_PHYS_PATH="${LIBFGCM}/dynphy_lonlat"
316	DYN_PHYS_SUB_PATH="${LIBFGCM}/dynphy_lonlat/phy${phys_root}"
317	fi
318
319	if [[ "$filtre" == "filtrez" ]]
320	then
321	FILTRE_PATH=${LIBFGCM}/$filtre
322	fi
323
324	if [[ "$chimie" == "INCA" ]]
325	then
326	CPP_KEY="$CPP_KEY INCA"
327	INCLUDE_DIR="$INCLUDE_DIR -I${INCA_INCDIR}"
328	LIB="$LIB -L${INCA_LIBDIR} ${INCA_LIB}"
329	fi
330
331	if [[ "$couple" != "false" ]]
332	then
333	if [[ "$couple" == "MPI1" ]]
334	then
335	CPP_KEY="$CPP_KEY CPP_COUPLE"
336	export OASIS_INCDIR=$LMDGCM/../../prism/X64/build/lib/psmile.MPI1
337	export OASIS_LIBDIR=$LMDGCM/../../prism/X64/lib
338	INCLUDE_DIR="$INCLUDE_DIR -I${OASIS_INCDIR}"
339	LIB="$LIB -L${OASIS_LIBDIR} ${OASIS_LIB}"
340	else
341	CPP_KEY="$CPP_KEY CPP_COUPLE CPP_OMCT"
342	INCLUDE_DIR="$INCLUDE_DIR -I${OASIS_INCDIR}"
343	LIB="$LIB -L${OASIS_LIBDIR} ${OASIS_LIB}"
344	fi
345	fi
346
347	if [[ "$parallel" != "none" && \
348	( "$code" == "newstart" \|\| "$code" == "start2archive" ) ]]
349	then
350	echo "newstart or start2archive utilities should be run in serial!"
351	echo " Compile without -parallel [mpi\|omp\|mpi_omp] option!"
352	exit 1
353	fi
354
355	if [[ "$parallel" == "mpi" ]]
356	then
357	CPP_KEY="$CPP_KEY CPP_PARA CPP_MPI"
358	PARA_FFLAGS="%MPI_FFLAGS"
359	PARA_LD="%MPI_LD"
360	elif [[ "$parallel" == "omp" ]]
361	then
362	CPP_KEY="$CPP_KEY CPP_PARA CPP_OMP"
363	PARA_FFLAGS="%OMP_FFLAGS"
364	PARA_LD="%OMP_LD"
365	elif [[ "$parallel" == "mpi_omp" ]]
366	then
367	CPP_KEY="$CPP_KEY CPP_PARA CPP_MPI CPP_OMP"
368	PARA_FFLAGS="%MPI_FFLAGS %OMP_FFLAGS"
369	PARA_LD="%MPI_LD %OMP_LD"
370	fi
371
372	if [[ ( "$parallel" == "omp" \|\| "$parallel" == "mpi_omp" ) \
373	&& "$compil_mod" == "debug" ]]
374	then
375	echo "Usually, parallelization with OpenMP requires some optimization."
376	echo "We suggest switching to \"-dev\"."
377	fi
378
379	if [ "$veget" = "true" -o "$veget" = "orchidee1.9" -o "$veget" = "orchidee2.0" ]
380	then
381	#NB: option 'true': for backward compatibility. To be used with ORCHIDEE tag 1.9-1.9.6
382	# For this case, cpp flag ORCHIDEE_NOOPENMP must be added to the makelmdz_fcm arguments
383	# option orchidee1.9 : Compile with ORCHIDEE version up to the inclusion of OpenMP in ORCHIDEE : tag 1.9-1.9.5(version AR5)-1.9.6
384	INCLUDE_DIR="${INCLUDE_DIR} ${ORCHIDEE_INCDIR}"
385	CPP_KEY="$CPP_KEY CPP_VEGET"
386	# temporary, for Orchidee versions 1.9.* (before openmp activation)
387	if [[ "$veget" == "orchidee1.9" ]] ; then
388	CPP_KEY="$CPP_KEY ORCHIDEE_NOOPENMP"
389	fi
390	if [[ "$veget" == "orchidee2.0" ]] ; then
391	orch_libs="sechiba parameters stomate parallel orglob orchidee"
392	else
393	orch_libs="sechiba parameters stomate parallel orglob"
394	fi
395	LIB="${LIB} -L${ORCHIDEE_LIBDIR} ${ORCHIDEE_LIB}"
396	elif [[ "$veget" != "false" ]] ; then
397	echo "Option -v $veget does not exist"
398	echo "Use ./makelmdz_fcm -h for more information"
399	exit 1
400	fi
401
402	if [[ "$sisvat" == "true" ]]
403	then
404	CPP_KEY="$CPP_KEY CPP_SISVAT"
405	SISVAT_PATH="$LIBFGCM/%PHYS/sisvat"
406	fi
407
408	if [[ "$rrtm" == "true" ]]
409	then
410	CPP_KEY="$CPP_KEY CPP_RRTM"
411	RRTM_PATH="$LIBFGCM/%PHYS/rrtm"
412	fi
413
414	if [[ "$dust" == "true" ]]
415	then
416	CPP_KEY="$CPP_KEY CPP_Dust"
417	DUST_PATH="$LIBFGCM/%PHYS/Dust"
418	fi
419
420	if [[ "$strataer" == "true" ]]
421	then
422	CPP_KEY="$CPP_KEY CPP_StratAer"
423	STRATAER_PATH="$LIBFGCM/%PHYS/StratAer"
424	fi
425
426	if [[ $io == ioipsl ]]
427	then
428	CPP_KEY="$CPP_KEY CPP_IOIPSL"
429	INCLUDE_DIR="$INCLUDE_DIR ${IOIPSL_INCDIR}"
430	LIB="$LIB ${IOIPSL_LIBDIR} ${IOIPSL_LIB}"
431	elif [[ $io == mix ]]
432	then
433	# For now, xios implies also using ioipsl
434	CPP_KEY="$CPP_KEY CPP_IOIPSL CPP_XIOS"
435	INCLUDE_DIR="$INCLUDE_DIR ${IOIPSL_INCDIR} ${XIOS_INCDIR}"
436	LIB="$LIB ${IOIPSL_LIBDIR} ${IOIPSL_LIB} ${XIOS_LIBDIR} ${XIOS_LIB}"
437	elif [[ $io == xios ]]
438	then
439	# For now, xios implies also using ioipsl
440	CPP_KEY="$CPP_KEY CPP_IOIPSL CPP_XIOS CPP_IOIPSL_NO_OUTPUT"
441	INCLUDE_DIR="$INCLUDE_DIR ${IOIPSL_INCDIR} ${XIOS_INCDIR}"
442	LIB="$LIB ${IOIPSL_LIBDIR} ${IOIPSL_LIB} ${XIOS_LIBDIR} ${XIOS_LIB}"
443	fi
444
445	if [[ "$cosp" == "true" ]]
446	then
447	CPP_KEY="$CPP_KEY CPP_COSP"
448	COSP_PATH="$LIBFGCM/cosp"
449	# LIB="${LIB} -l${LIBPREFIX}cosp"
450	fi
451
452	# for Titan (but could be used by others as well), there is also "chimtitan"
453	if [[ -d ${LIBFGCM}/chim${physique} ]]
454	then
455	CHEM_PATH="${LIBFGCM}/chim${physique}"
456	INCLUDE_DIR="$INCLUDE_DIR -I${LIBFGCM}/chim${physique}"
457	fi
458
459	# for Titan add microphysics dependencies
460	if [[ -d ${LIBFGCM}/muphy${physique} ]] ; then
461	if ! [ `echo $CPP_KEY \| grep -c "OLD_COMPILO"` -gt 0 ] ; then
462	# add muphy{physique} to the list of files to compile.
463	MUPHY_PATH="${LIBFGCM}/muphy${physique}"
464	# For Titan as we embbed some libraries with CPP keys, we define them:
465	# -DPREC={32\|64\|80} real kind precision (32: simple, 64: double, 80: extended double)
466	# -DHAVE_NC_FTN=1 (mandatory: for support of NetCDF in lintnd).
467	CPP_KEY="$CPP_KEY PREC=64 HAVE_NC_FTN=1"
468	if [[ "${physique}" == "titan" ]] ; then
469	echo "Yaahh you're about to use YAMMS in a GCM..."
470	fi
471	fi
472	fi
473
474	# for Venus (but could be used by others as well), there is also "phyvenus/cloudvenus"
475	if [[ -d ${LIBFGCM}/phy${physique}/cloud${physique} ]]
476	then
477	CLOUD_PATH="${LIBFGCM}/phy${physique}/cloud${physique}"
478	INCLUDE_DIR="$INCLUDE_DIR -I${LIBFGCM}/phy${physique}/cloud${physique}"
479	fi
480
481	# for Mars (but could be used by others as well), there is also "aeronomars"
482	if [[ -d ${LIBFGCM}/aerono${physique} ]]
483	then
484	AERONO_PATH="${LIBFGCM}/aerono${physique}"
485	INCLUDE_DIR="$INCLUDE_DIR -I${LIBFGCM}/aerono${physique}"
486	fi
487
488	if [[ -d ${LIBFGCM}/evolution && "$code" == "pem" ]]
489	then
490	if [[ "$physique" == "std" ]]
491	then
492	CPP_KEY="$CPP_KEY CPP_STD"
493	fi
494	EVOLUTION_PATH="${LIBFGCM}/evolution"
495	INCLUDE="$INCLUDE -I${LIBFGCM}/evolution"
496	fi
497
498	if [[ -d ${LIBFGCM}/evolution && "$code" == "reshape_XIOS_output" ]]
499	then
500	if [[ "$physique" == "std" ]]
501	then
502	CPP_KEY="$CPP_KEY CPP_STD"
503	fi
504	EVOLUTION_PATH="${LIBFGCM}/evolution"
505	INCLUDE="$INCLUDE -I${LIBFGCM}/evolution"
506	fi
507
508
509	# NETCDF library include/library paths
510	INCLUDE_DIR="$INCLUDE_DIR ${NETCDF_INCDIR}"
511	LIB="$LIB ${NETCDF_LIBDIR} ${NETCDF_LIB}"
512
513	########################################################################
514	# calcul du nombre de dimensions
515	########################################################################
516
517
518	dim_full=$dim
519	dim=`echo $dim \| sed -e 's/[^0-9]/ /g'`
520	set $dim
521	dimc=$#
522	echo calcul de la dimension
523	echo dim $dim
524	echo dimc $dimc
525
526
527	########################################################################
528	# Gestion des dimensions du modele.
529	# on cree ou remplace le fichier des dimensions
530	########################################################################
531
532	cd $LIBFGCM/grid
533	if [[ -f dimensions.h ]]
534	then
535	echo 'ATTENTION: vous etes sans doute en train de compiler le modele par ailleurs'
536	echo "Attendez que la premiere compilation soit terminee pour relancer la suivante."
537	echo "Si vous etes sur que vous ne compilez pas le modele par ailleurs,"
538	echo vous pouvez continuer en repondant oui.
539	echo "Voulez-vous vraiment continuer?"
540	echo ""
541	echo "WARNING: you are probably already compiling the model somewhere else."
542	echo "Wait until the first compilation is finished before launching this one."
543	echo "If you are sure that you are not compiling elsewhere, just answer "
544	echo "yes (or 'oui') to the question below to proceed."
545	echo "Do you wish to continue?"
546	read reponse
547	if [[ $reponse == "oui" \|\| $reponse == "yes" ]]
548	then
549	\rm -f $LIBFGCM/grid/dimensions.h
550	else
551	exit 1
552	fi
553	fi
554
555
556	cd $LIBFGCM/grid/dimension
557	./makdim $dim
558	if (($? != 0))
559	then
560	exit 1
561	fi
562
563	cat $LIBFGCM/grid/dimensions.h
564	cd $LMDGCM
565
566	if [[ "$bands" != "" ]]
567	then
568	# Generic model, recreate bands.h (IR & VIS bands for radiative transfer)
569	makbandsarg=$(echo $bands \| sed -e 's/[^0-9]/ /g')
570	cd $LIBFGCM/phy$physique/bands
571	./makbands $makbandsarg
572	cat $LIBFGCM/phy$physique/bands.h
573	cd $LMDGCM
574	fi
575
576	if [[ "$scatterers" != "" ]]
577	then
578	if [[ -f $LIBFGCM/phy$physique/scatterers/make_scatterers ]]
579	then
580	# Generic model, recreate scatterers.h
581	cd $LIBFGCM/phy$physique/scatterers
582	./make_scatterers $scatterers
583	cat $LIBFGCM/phy$physique/scatterers.h
584	cd $LMDGCM
585	else
586	echo "Error: you should not use the -s # option with -p $physique"
587	exit 1
588	fi
589	fi
590
591
592	########################################################################
593	# Differentes dynamiques (3d, 2d, 1d)
594	########################################################################
595
596	dimension=`echo $dim \| wc -w`
597	echo dimension $dimension
598
599	if (( $dimension == 3 ))
600	then
601	cd $LIBFGCM/grid
602	\rm fxyprim.h
603	cp -p fxy_${grille}.h fxyprim.h
604	#else
605	# echo "Probleme dans les dimensions de la dynamique !!"
606	# echo "Non reactive pour l'instant !!!"
607	fi
608
609	if (( $dimension == 1 ))
610	then
611	## Sanity check: 1D models should be used in serial
612	## unless compiled with xios and then it should be in mpi only
613	if [[ $io == xios ]]
614	then
615	echo "OK io xios"
616	if [[ $parallel != "mpi" ]]
617	then
618	echo "Error: a 1D model compiled with xios should also be compiled with "
619	echo " -parallel mpi option!"
620	exit 1
621	fi
622	else
623	# no xios, check that it is in serial only
624	if [[ $parallel != "none" ]]
625	then
626	echo "Error: a 1D model should not be compiled with "
627	echo " -parallel [mpi\|omp\|mpi_omp] option!"
628	exit 1
629	fi
630	fi # of if [[ $io == "xios" ]]
631	CPP_KEY="$CPP_KEY CPP_1D"
632	##in 1D, add dyn3d to include path (because main prog is in physics)
633	INCLUDE_DIR="$INCLUDE_DIR -Ilibf/dyn3d -Ilibf/dyn3d_common"
634	## no filtre in 1d:
635	FILTRE_PATH=$LMDGCM/.void_dir
636	## no need to compile all routines in dyn3d_common either:
637	DYN_COMMON_PATH=$LMDGCM/.void_dir
638	## no need to compile all routines in dynlmdz_phy... ;
639	## (because key ones are included in 1D main program)
640	DYN_PHYS_PATH=$LMDGCM/.void_dir
641	DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir
642	fi
643
644	######################################################################
645	# Traitement special pour le nouveau rayonnement de Laurent Li.
646	# ---> YM desactive pour le traitemement en parallele
647	######################################################################
648
649	#if [[ -f $libf/phy$physique/raddim.h ]]
650	#then
651	# if [[ -f $libf/phy$physique/raddim.$dimh.h ]]
652	#then
653	# \rm -f $libf/phy$physique/raddim.h
654	# cp -p $libf/phy$physique/raddim.$dimh.h $libf/phy$physique/raddim.h
655	# echo $libf/phy$physique/raddim.$dimh.h
656	# cat $libf/phy$physique/raddim.h
657	# else
658	# echo On peut diminuer la taille de l executable en creant
659	# echo le fichier $libf/phy$physique/raddim.$dimh.h
660	# \cp -p $libf/phy$physique/raddim.defaut.h $libf/phy$physique/raddim.h
661	# fi
662	#fi
663
664	######################################################################
665	# Gestion du filtre qui n'existe qu'en 3d.
666	######################################################################
667
668	if (( `expr $dimc \> 2` == 1 ))
669	then
670	filtre="FILTRE=$filtre"
671	else
672	filtre="FILTRE= L_FILTRE= "
673	fi
674	echo MACRO FILTRE $filtre
675
676	echo $dimc
677
678
679
680	######################################################################
681	# Creation du suffixe de la configuration
682	######################################################################
683
684	if [[ $libphy != "true" ]];then
685	SUFF_NAME=_${dim_full}
686	fi
687	SUFF_NAME=${SUFF_NAME}_phy${physique}
688
689	if [[ "$bands" != "" ]]
690	then
691	#if bands option -b VISxIR is used, add "_bVISxIR" to executable name
692	SUFF_NAME=${SUFF_NAME}_b$bands
693	fi
694
695	if [[ "$parallel" != "none" ]]
696	then
697	SUFF_NAME=${SUFF_NAME}_para
698	if (( $dimension == 1 ))
699	then
700	# dynamics-related routines in"dyn1d" subdirectory of phy${physique}
701	DYN=phy${physique}/dyn1d
702	else
703	DYN=dyn${dimc}d${paramem}
704	fi
705	if [[ "$paramem" == "mem" ]]
706	then
707	SUFF_NAME=${SUFF_NAME}_${paramem}
708	fi
709	else
710	SUFF_NAME=${SUFF_NAME}_seq
711	if (( $dimension == 1 ))
712	then
713	# dynamics-related routines in"dyn1d" subdirectory of phy${physique}
714	DYN=phy${physique}/dyn1d
715	else
716	DYN=dyn${dimc}d
717	fi
718	fi
719
720	if [[ $veget != "false" ]]
721	then
722	SUFF_NAME=${SUFF_NAME}_orch
723	fi
724
725	if [[ $couple != "false" ]]
726	then
727	SUFF_NAME=${SUFF_NAME}_couple
728	fi
729
730	if [[ $chimie == "INCA" ]]
731	then
732	SUFF_NAME=${SUFF_NAME}_inca
733	fi
734	SUFF_DEBUG=
735	if [[ "$compil_mod" == "debug" ]]
736	then
737	SUFF_DEBUG=_debug
738	fi
739	SUFF_DIR=${SUFF_NAME}${SUFF_DEBUG}
740
741	if [[ $libphy == "true" ]]
742	then
743	# special case where we compile only the physics
744	DYN=$LMDGCM/.void_dir
745	DYN_COMMON_PATH=$LMDGCM/.void_dir
746	FILTRE_PATH=$LMDGCM/.void_dir
747	DYN_PHYS_PATH=$LMDGCM/.void_dir
748	DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir
749	#and there is no main program to generate
750	code=""
751	SUFF_NAME=""
752	# SUFF_DIR=
753	else
754	SUFF_NAME=${SUFF_NAME}.e
755	fi
756
757	cd $LMDGCM
758	config_fcm="config.fcm"
759	rm -f $config_fcm
760	touch $config_fcm
761
762	echo "%ARCH $arch" >> $config_fcm
763	echo "%INCDIR $INCLUDE_DIR" >> $config_fcm
764	echo "%LIB $LIB" >> $config_fcm
765	echo "%ROOT_PATH $PWD" >> $config_fcm
766	echo "%LIBF $LIBFGCM" >> $config_fcm
767	echo "%LIBO $LIBOGCM" >> $config_fcm
768	echo "%DYN $DYN" >> $config_fcm
769	echo "%DYN_COMMON $DYN_COMMON_PATH" >> $config_fcm
770	echo "%PHY_COMMON $PHY_COMMON_PATH" >> $config_fcm
771	echo "%FILTRE $FILTRE_PATH" >> $config_fcm
772	echo "%PHYS phy${physique}" >> $config_fcm
773	echo "%DYN_PHYS $DYN_PHYS_PATH" >> $config_fcm
774	echo "%DYN_PHYS_SUB $DYN_PHYS_SUB_PATH" >> $config_fcm
775	echo "%RRTM $RRTM_PATH" >> $config_fcm
776	echo "%DUST $DUST_PATH" >> $config_fcm
777	echo "%STRATAER $STRATAER_PATH" >> $config_fcm
778	echo "%SISVAT $SISVAT_PATH" >> $config_fcm
779	echo "%COSP $COSP_PATH" >> $config_fcm
780	echo "%CHEM $CHEM_PATH" >> $config_fcm
781	echo "%CLOUD $CLOUD_PATH" >> $config_fcm
782	echo "%MUPHY $MUPHY_PATH" >> $config_fcm
783	echo "%AERONO $AERONO_PATH" >> $config_fcm
784	echo "%EVOLUTION $EVOLUTION_PATH" >> $config_fcm
785	echo "%CPP_KEY $CPP_KEY" >> $config_fcm
786	echo "%EXEC $code" >> $config_fcm
787	echo "%SUFF_NAME $SUFF_NAME" >> $config_fcm
788	echo "%SUFF_DIR $SUFF_DIR" >> $config_fcm
789	echo "%COMPIL_FFLAGS $COMPIL_FFLAGS" >> $config_fcm
790	echo "%PARA_FFLAGS $PARA_FFLAGS" >> $config_fcm
791	echo "%PARA_LD $PARA_LD" >> $config_fcm
792	echo "%EXT_SRC $EXT_SRC" >> $config_fcm
793
794	# setup arch.fcm and arch.opt
795	rm -f arch.fcm
796	rm -f arch.opt
797	ln -s arch/arch-${arch}.fcm arch.fcm
798	if test -f arch/arch-${arch}.opt && [ $compil_mod = "prod" ]
799	then
800	ln -s arch/arch-${arch}.opt arch.opt
801	else
802	ln -s .void_file arch.opt
803	fi
804
805	# cleanup before compiling
806	if [[ $libphy != "true" ]]; then
807	rm -f bin/${code}${SUFF_NAME}
808	fi
809	rm -f $LIBOGCM/${arch}${SUFF_DIR}/.config/fcm.bld.lock
810
811	function delete_dim_h {
812	if [[ -r $LIBFGCM/grid/dimensions.h ]];then
813	echo "Removing dimensions.h"
814	\rm -f $LIBFGCM/grid/dimensions.h
815	fi
816	}
817
818	./build_gcm ${fcm_path} -j $job $full \|\| (echo "Build gcm failed."; delete_dim_h; exit 1)
819
820	rm -rf tmp_src
821	rm -rf config
822	ln -s $LIBOGCM/${arch}${SUFF_DIR}/.config config
823	ln -s $LIBOGCM/${arch}${SUFF_DIR}/.config/ppsrc tmp_src
824
825	delete_dim_h

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