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source: trunk/LMDZ.COMMON/makelmdz_fcm @ 2967

Last change on this file since 2967 was 2967, checked in by emillour, 18 months ago
Generic PCM: Adapt makelmdz_fcm to add to executable name "_bVISxIR" when option -b VISxIR is used. While at it remove obsolete script "makegcm". EM
File size: 22.5 KB

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1	#!/bin/bash
2	# $Id: makelmdz_fcm 1615 2012-02-10 15:42:26Z emillour $
3	# This is a script in Bash to compile the GCM and related tools
4	#
5	##set -x
6	set -e
7	########################################################################
8	# options par defaut pour la commande make
9	########################################################################
10
11	dim="96x72x19"
12	physique=lmd
13	filtre=filtrez
14	grille=reg
15	couple=false
16	veget=false
17	sisvat=false
18	rrtm=false
19	dust=false
20	strataer=false
21	chimie=false
22	chemistry=false
23	parallel=none
24	paramem="par"
25	compil_mod=prod
26	io=ioipsl
27	LIBPREFIX=""
28	cosp=false
29	bands=""
30	scatterers=""
31	job=1
32	full=''
33	libphy=false
34
35	arch_defined="FALSE"
36	arch_path="arch"
37	arch_default_path="arch"
38
39	LMDGCM=`/bin/pwd`
40	LIBOGCM=$LMDGCM/libo
41	LIBFGCM=$LMDGCM/libf
42	DYN_COMMON_PATH=$LIBFGCM/dyn3d_common
43	# path for optional packages, but default set to ".void_dir"
44	FILTRE_PATH=$LMDGCM/.void_dir
45	DYN_PHYS_PATH=$LMDGCM/.void_dir
46	DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir
47	PHY_COMMON_PATH=$LMDGCM/.void_dir
48	RRTM_PATH=$LMDGCM/.void_dir
49	DUST_PATH=$LMDGCM/.void_dir
50	STRATAER_PATH=$LMDGCM/.void_dir
51	SISVAT_PATH=$LMDGCM/.void_dir
52	COSP_PATH=$LMDGCM/.void_dir
53	CHEM_PATH=$LMDGCM/.void_dir
54	CLOUD_PATH=$LMDGCM/.void_dir
55	MUPHY_PATH=$LMDGCM/.void_dir
56	AERONO_PATH=$LMDGCM/.void_dir
57	EVOLUTION_PATH=$LMDGCM/.void_dir
58	# Path to fcm utility:
59	##fcm_path=$LMDGCM/tools/fcm/bin
60	##fcm_path=/planeto/mturbet/planeto2-mturbet/FCM_V1.2/bin
61	fcm_path=$(dirname $(which fcm))
62
63	########################################################################
64	# Quelques initialisations de variables du shell.
65	########################################################################
66
67	CPP_KEY=""
68	INCLUDE_DIR=""
69	LIB=""
70	adjnt=""
71	COMPIL_FFLAGS="%PROD_FFLAGS"
72	PARA_FFLAGS=""
73	PARA_LD=""
74	EXT_SRC=""
75
76	########################################################################
77	# lecture des options de mymake
78	########################################################################
79
80	while (($# > 0))
81	do
82	case $1 in
83	"-h") cat <<fin
84	Usage :
85	makelmdz_fcm [options] -arch arch_name exec
86	[-h] : brief help
87	[-d [[IMx]JMx]LM] : IM, JM, LM are the dimensions in x, y, z (default: $dim)
88	[-s nscat] : (Generic) Number of radiatively active scatterers
89	[-b IRxVIS] : (Generic) Number of infrared (IR) and visible (VIS) bands for radiative transfer
90	[-p PHYS] : set of physical parametrizations (in libf/phyPHYS), (default: lmd)
91	[-prod / -dev / -debug] : compilation mode production (default) / developement / debug .
92	[-c false/MPI1/OMCT] : (Earth) coupling with ocean model : MPI1/OMCT/false (default: false)
93	[-v false/orchidee2.0/orchidee1.9/true] : (Earth) version of the vegetation model to include (default: false)
94	false : no vegetation model
95	orchidee2.0 : compile using ORCHIDEE 2.0 (or more recent version)
96	orchidee1.9 : compile using ORCHIDEE up to the version including OpenMP in ORCHIDEE : tag 1.9-1.9.5(version AR5)-1.9.6
97	true : (obsolete; for backward compatibility) use ORCHIDEE tag 1.9-1.9.6
98	[-chimie INCA/false] : (Earth) with INCA chemistry model or without (default: false)
99	[-cosp true/false] : (Earth) add the cosp model (default: false)
100	[-sisvat true/false] : (Earth) compile with/without sisvat package (default: false)
101	[-rrtm true/false] : (Earth) compile with/without rrtm package (default: false)
102	[-dust true/false] : (Earth) compile with/without the dust package by Boucher and co (default: false)
103	[-strataer true/false] : (Earth) compile with/without the strat aer package by Boucher and co (default: false)
104	[-parallel none/mpi/omp/mpi_omp] : parallelism (default: none) : mpi, openmp or mixted mpi_openmp
105	[-g GRI] : grid configuration in dyn3d/GRI_xy.h (default: reg, inclues a zoom)
106	[-io ioipsl/mix/xios] : Input/Output library (default: ioipsl)
107	[-include INCLUDES] : extra include path to add
108	[-cpp CPP_KEY] : additional preprocessing definitions
109	[-adjnt] : adjoint model, not operational ...
110	[-mem] : reduced memory dynamics (if in parallel mode)
111	[-filtre NOMFILTRE] : use filtre from libf/NOMFILTRE (default: filtrez)
112	[-link LINKS] : additional links with other libraries
113	[-j n] : active parallel compiling on ntask
114	[-full] : full (re-)compilation (from scratch)
115	[-libphy] : only compile physics package (no dynamics or main program)
116	[-fcm_path path] : path to the fcm tool (default: tools/fcm/bin)
117	[-ext_src path] : path to an additional set of routines to compile with the model
118	[-arch_path path] : path to architecture files (default: $arch_default_path)
119	-arch arch : target architecture
120	exec : executable to build
121	fin
122	exit;;
123
124	"-d")
125	dim=$2 ; shift ; shift ;;
126
127	"-p")
128	physique="$2" ; shift ; shift ;;
129
130	"-s")
131	scatterers=$2 ; shift ; shift ;;
132
133	"-b")
134	bands=$2 ; shift ; shift ;;
135
136	"-g")
137	grille="$2" ; shift ; shift ;;
138
139	"-c")
140	couple="$2" ; shift ; shift ;;
141
142	"-prod")
143	compil_mod="prod" ; shift ;;
144
145	"-dev")
146	compil_mod="dev" ; shift ;;
147
148	"-debug")
149	compil_mod="debug" ; shift ;;
150
151	"-io")
152	io="$2" ; shift ; shift ;;
153
154	"-v")
155	veget="$2" ; shift ; shift ;;
156
157	"-sisvat")
158	sisvat="$2" ; shift ; shift ;;
159
160	"-rrtm")
161	rrtm="$2" ; shift ; shift ;;
162
163	"-dust")
164	dust="$2" ; shift ; shift ;;
165
166	"-strataer")
167	strataer="$2" ; shift ; shift ;;
168
169	"-chimie")
170	chimie="$2" ; shift ; shift ;;
171
172	"-parallel")
173	parallel="$2" ; shift ; shift ;;
174
175	"-include")
176	INCLUDE_DIR="$INCLUDE_DIR -I$2" ; shift ; shift ;;
177
178	"-cpp")
179	CPP_KEY="$CPP_KEY $2" ; shift ; shift ;;
180
181	"-adjnt")
182	echo "not operational ... work to be done here ";exit
183	opt_dep="$opt_dep adjnt" ; adjnt="-ladjnt -ldyn3d "
184	optim="$optim -Dadj" ; shift ;;
185
186	"-cosp")
187	cosp="$2" ; shift ; shift ;;
188
189	"-mem")
190	paramem="mem" ; shift ;;
191
192	"-filtre")
193	filtre=$2 ; shift ; shift ;;
194
195	"-link")
196	LIB="$LIB $2" ; shift ; shift ;;
197
198	"-fcm_path")
199	fcm_path=$2 ; shift ; shift ;;
200
201	"-ext_src")
202	EXT_SRC=$2 ; shift ; shift ;;
203
204	"-j")
205	job=$2 ; shift ; shift ;;
206
207	"-full")
208	full="-full" ; shift ;;
209
210	"-libphy")
211	libphy="true" ; shift ;;
212
213	"-arch")
214	arch=$2 ; arch_defined="TRUE" ; shift ; shift ;;
215
216	"-arch_path")
217	arch_path=$2 ; arch_path_defined="TRUE"; shift ; shift ;;
218
219	*)
220	code="$1" ; shift ;;
221	esac
222	done
223
224	###############################################################
225	# path to fcm
226	###############################################################
227	# handle case when provided path to fcm was given as a relative
228	# path (from makelmdz_fcm script directory) and not an absolute path
229	if [[ ${fcm_path:0:1} != "/" ]] ; then
230	# prepend with makelmdz_fcm location
231	fcm_path=$(cd $(dirname $0) ; pwd)"/"${fcm_path}
232	fi
233
234	# add fcm_path to PATH
235	export PATH=${fcm_path}:${PATH}
236
237	echo "Path to fcm:"
238	echo ${fcm_path}
239
240	#################################
241	# setup arch.env and arch.path #
242	#################################
243	rm -f .void_file
244	echo > .void_file
245	rm -rf .void_dir
246	mkdir .void_dir
247
248	if [[ "$arch_defined" == "TRUE" ]]
249	then
250	rm -f arch.path
251	rm -f arch.env
252
253	if test -f $arch_path/arch-${arch}.path
254	then
255	ln -s $arch_path/arch-${arch}.path arch.path
256	elif test -f $arch_default_path/arch-${arch}.path
257	then
258	ln -s $arch_default_path/arch-${arch}.path arch.path
259	fi
260
261	if test -f $arch_path/arch-${arch}.env
262	then
263	ln -s $arch_path/arch-${arch}.env arch.env
264	elif test -f $arch_default_path/arch-${arch}.env
265	then
266	ln -s $arch_default_path/arch-${arch}.env arch.env
267	else
268	ln -s .void_file arch.env
269	fi
270	# source architecture PATH and ENV files
271	source arch.env
272	source arch.path
273	else
274	echo "You must define a target architecture"
275	exit 1
276	fi
277
278	########################################################################
279	# Definition des clefs CPP, des chemins des includes et modules
280	# et des libraries
281	########################################################################
282
283	if [[ "$compil_mod" == "prod" ]]
284	then
285	COMPIL_FFLAGS="%PROD_FFLAGS"
286	elif [[ "$compil_mod" == "dev" ]]
287	then
288	COMPIL_FFLAGS="%DEV_FFLAGS"
289	elif [[ "$compil_mod" == "debug" ]]
290	then
291	COMPIL_FFLAGS="%DEBUG_FFLAGS"
292	fi
293
294	phys_root=$physique
295	if [[ "${physique:0:3}" == "lmd" ]] ; then phys_root=lmd ; fi
296	if [[ "${physique:0:3}" == "mar" ]] ; then phys_root=mar ; fi
297	if [[ "${physique:0:4}" == "mars" ]] ; then phys_root=mars ; fi
298	if [[ "${physique:0:3}" == "std" ]] ; then phys_root=std ; fi
299	if [[ "${physique:0:5}" == "venus" ]] ; then phys_root=venus ; fi
300	if [[ "${physique:0:5}" == "titan" ]] ; then phys_root=titan ; fi
301	if [[ "${physique:0:3}" == "dev" ]] ; then phys_root=dev ; fi
302
303	if [[ "$physique" != "nophys" ]]
304	then
305	#We'll use some physics
306	CPP_KEY="$CPP_KEY CPP_PHYS"
307	if [[ "${phys_root}" == "lmd" ]]
308	then
309	#For lmd physics, default planet type is Earth
310	CPP_KEY="$CPP_KEY CPP_EARTH"
311	fi
312	# set physics common utilities path
313	PHY_COMMON_PATH="${LIBFGCM}/phy_common"
314	# set the dyn/phys interface path
315	DYN_PHYS_PATH="${LIBFGCM}/dynphy_lonlat"
316	DYN_PHYS_SUB_PATH="${LIBFGCM}/dynphy_lonlat/phy${phys_root}"
317	fi
318
319	if [[ "$filtre" == "filtrez" ]]
320	then
321	FILTRE_PATH=${LIBFGCM}/$filtre
322	fi
323
324	if [[ "$chimie" == "INCA" ]]
325	then
326	CPP_KEY="$CPP_KEY INCA"
327	INCLUDE_DIR="$INCLUDE_DIR -I${INCA_INCDIR}"
328	LIB="$LIB -L${INCA_LIBDIR} ${INCA_LIB}"
329	fi
330
331	if [[ "$couple" != "false" ]]
332	then
333	if [[ "$couple" == "MPI1" ]]
334	then
335	CPP_KEY="$CPP_KEY CPP_COUPLE"
336	export OASIS_INCDIR=$LMDGCM/../../prism/X64/build/lib/psmile.MPI1
337	export OASIS_LIBDIR=$LMDGCM/../../prism/X64/lib
338	INCLUDE_DIR="$INCLUDE_DIR -I${OASIS_INCDIR}"
339	LIB="$LIB -L${OASIS_LIBDIR} ${OASIS_LIB}"
340	else
341	CPP_KEY="$CPP_KEY CPP_COUPLE CPP_OMCT"
342	INCLUDE_DIR="$INCLUDE_DIR -I${OASIS_INCDIR}"
343	LIB="$LIB -L${OASIS_LIBDIR} ${OASIS_LIB}"
344	fi
345	fi
346
347	if [[ "$parallel" != "none" && \
348	( "$code" == "newstart" \|\| "$code" == "start2archive" ) ]]
349	then
350	echo "newstart or start2archive utilities should be run in serial!"
351	echo " Compile without -parallel [mpi\|omp\|mpi_omp] option!"
352	exit
353	fi
354
355	if [[ "$parallel" == "mpi" ]]
356	then
357	CPP_KEY="$CPP_KEY CPP_PARA CPP_MPI"
358	PARA_FFLAGS="%MPI_FFLAGS"
359	PARA_LD="%MPI_LD"
360	elif [[ "$parallel" == "omp" ]]
361	then
362	CPP_KEY="$CPP_KEY CPP_PARA CPP_OMP"
363	PARA_FFLAGS="%OMP_FFLAGS"
364	PARA_LD="%OMP_LD"
365	elif [[ "$parallel" == "mpi_omp" ]]
366	then
367	CPP_KEY="$CPP_KEY CPP_PARA CPP_MPI CPP_OMP"
368	PARA_FFLAGS="%MPI_FFLAGS %OMP_FFLAGS"
369	PARA_LD="%MPI_LD %OMP_LD"
370	fi
371
372	if [[ ( "$parallel" == "omp" \|\| "$parallel" == "mpi_omp" ) \
373	&& "$compil_mod" == "debug" ]]
374	then
375	echo "Usually, parallelization with OpenMP requires some optimization."
376	echo "We suggest switching to \"-dev\"."
377	fi
378
379	if [ "$veget" = "true" -o "$veget" = "orchidee1.9" -o "$veget" = "orchidee2.0" ]
380	then
381	#NB: option 'true': for backward compatibility. To be used with ORCHIDEE tag 1.9-1.9.6
382	# For this case, cpp flag ORCHIDEE_NOOPENMP must be added to the makelmdz_fcm arguments
383	# option orchidee1.9 : Compile with ORCHIDEE version up to the inclusion of OpenMP in ORCHIDEE : tag 1.9-1.9.5(version AR5)-1.9.6
384	INCLUDE_DIR="${INCLUDE_DIR} ${ORCHIDEE_INCDIR}"
385	CPP_KEY="$CPP_KEY CPP_VEGET"
386	# temporary, for Orchidee versions 1.9.* (before openmp activation)
387	if [[ "$veget" == "orchidee1.9" ]] ; then
388	CPP_KEY="$CPP_KEY ORCHIDEE_NOOPENMP"
389	fi
390	if [[ "$veget" == "orchidee2.0" ]] ; then
391	orch_libs="sechiba parameters stomate parallel orglob orchidee"
392	else
393	orch_libs="sechiba parameters stomate parallel orglob"
394	fi
395	LIB="${LIB} -L${ORCHIDEE_LIBDIR} ${ORCHIDEE_LIB}"
396	elif [[ "$veget" != "false" ]] ; then
397	echo "Option -v $veget does not exist"
398	echo "Use ./makelmdz_fcm -h for more information"
399	exit
400	fi
401
402	if [[ "$sisvat" == "true" ]]
403	then
404	CPP_KEY="$CPP_KEY CPP_SISVAT"
405	SISVAT_PATH="$LIBFGCM/%PHYS/sisvat"
406	fi
407
408	if [[ "$rrtm" == "true" ]]
409	then
410	CPP_KEY="$CPP_KEY CPP_RRTM"
411	RRTM_PATH="$LIBFGCM/%PHYS/rrtm"
412	fi
413
414	if [[ "$dust" == "true" ]]
415	then
416	CPP_KEY="$CPP_KEY CPP_Dust"
417	DUST_PATH="$LIBFGCM/%PHYS/Dust"
418	fi
419
420	if [[ "$strataer" == "true" ]]
421	then
422	CPP_KEY="$CPP_KEY CPP_StratAer"
423	STRATAER_PATH="$LIBFGCM/%PHYS/StratAer"
424	fi
425
426	if [[ $io == ioipsl ]]
427	then
428	CPP_KEY="$CPP_KEY CPP_IOIPSL"
429	INCLUDE_DIR="$INCLUDE_DIR ${IOIPSL_INCDIR}"
430	LIB="$LIB ${IOIPSL_LIBDIR} ${IOIPSL_LIB}"
431	elif [[ $io == mix ]]
432	then
433	# For now, xios implies also using ioipsl
434	CPP_KEY="$CPP_KEY CPP_IOIPSL CPP_XIOS"
435	INCLUDE_DIR="$INCLUDE_DIR ${IOIPSL_INCDIR} ${XIOS_INCDIR}"
436	LIB="$LIB ${IOIPSL_LIBDIR} ${IOIPSL_LIB} ${XIOS_LIBDIR} ${XIOS_LIB}"
437	elif [[ $io == xios ]]
438	then
439	# For now, xios implies also using ioipsl
440	CPP_KEY="$CPP_KEY CPP_IOIPSL CPP_XIOS CPP_IOIPSL_NO_OUTPUT"
441	INCLUDE_DIR="$INCLUDE_DIR ${IOIPSL_INCDIR} ${XIOS_INCDIR}"
442	LIB="$LIB ${IOIPSL_LIBDIR} ${IOIPSL_LIB} ${XIOS_LIBDIR} ${XIOS_LIB}"
443	fi
444
445	if [[ "$cosp" == "true" ]]
446	then
447	CPP_KEY="$CPP_KEY CPP_COSP"
448	COSP_PATH="$LIBFGCM/cosp"
449	# LIB="${LIB} -l${LIBPREFIX}cosp"
450	fi
451
452	# for Titan (but could be used by others as well), there is also "chimtitan"
453	if [[ -d ${LIBFGCM}/chim${physique} ]]
454	then
455	CHEM_PATH="${LIBFGCM}/chim${physique}"
456	INCLUDE_DIR="$INCLUDE_DIR -I${LIBFGCM}/chim${physique}"
457	fi
458
459	# for Titan add microphysics dependencies
460	if [[ -d ${LIBFGCM}/muphy${physique} ]] ; then
461	if ! [ `echo $CPP_KEY \| grep -c "OLD_COMPILO"` -gt 0 ] ; then
462	# add muphy{physique} to the list of files to compile.
463	MUPHY_PATH="${LIBFGCM}/muphy${physique}"
464	# For Titan as we embbed some libraries with CPP keys, we define them:
465	# -DPREC={32\|64\|80} real kind precision (32: simple, 64: double, 80: extended double)
466	# -DHAVE_NC_FTN=1 (mandatory: for support of NetCDF in lintnd).
467	CPP_KEY="$CPP_KEY PREC=64 HAVE_NC_FTN=1"
468	if [[ "${physique}" == "titan" ]] ; then
469	echo "Yaahh you're about to use YAMMS in a GCM..."
470	fi
471	fi
472	fi
473
474	# for Venus (but could be used by others as well), there is also "phyvenus/cloudvenus"
475	if [[ -d ${LIBFGCM}/phy${physique}/cloud${physique} ]]
476	then
477	CLOUD_PATH="${LIBFGCM}/phy${physique}/cloud${physique}"
478	INCLUDE_DIR="$INCLUDE_DIR -I${LIBFGCM}/phy${physique}/cloud${physique}"
479	fi
480
481	# for Mars (but could be used by others as well), there is also "aeronomars"
482	if [[ -d ${LIBFGCM}/aerono${physique} ]]
483	then
484	AERONO_PATH="${LIBFGCM}/aerono${physique}"
485	INCLUDE_DIR="$INCLUDE_DIR -I${LIBFGCM}/aerono${physique}"
486	fi
487
488	if [[ -d ${LIBFGCM}/evolution && "$code" == "pem" ]]
489	then
490	EVOLUTION_PATH="${LIBFGCM}/evolution"
491	INCLUDE="$INCLUDE -I${LIBFGCM}/evolution"
492	fi
493
494	# NETCDF library include/library paths
495	INCLUDE_DIR="$INCLUDE_DIR ${NETCDF_INCDIR}"
496	LIB="$LIB ${NETCDF_LIBDIR} ${NETCDF_LIB}"
497
498	########################################################################
499	# calcul du nombre de dimensions
500	########################################################################
501
502
503	dim_full=$dim
504	dim=`echo $dim \| sed -e 's/[^0-9]/ /g'`
505	set $dim
506	dimc=$#
507	echo calcul de la dimension
508	echo dim $dim
509	echo dimc $dimc
510
511
512	########################################################################
513	# Gestion des dimensions du modele.
514	# on cree ou remplace le fichier des dimensions
515	########################################################################
516
517	cd $LIBFGCM/grid
518	if [[ -f dimensions.h ]]
519	then
520	echo 'ATTENTION: vous etes sans doute en train de compiler le modele par ailleurs'
521	echo "Attendez que la premiere compilation soit terminee pour relancer la suivante."
522	echo "Si vous etes sur que vous ne compilez pas le modele par ailleurs,"
523	echo vous pouvez continuer en repondant oui.
524	echo "Voulez-vous vraiment continuer?"
525	echo ""
526	echo "WARNING: you are probably already compiling the model somewhere else."
527	echo "Wait until the first compilation is finished before launching this one."
528	echo "If you are sure that you are not compiling elsewhere, just answer "
529	echo "yes (or 'oui') to the question below to proceed."
530	echo "Do you wish to continue?"
531	read reponse
532	if [[ $reponse == "oui" \|\| $reponse == "yes" ]]
533	then
534	\rm -f $LIBFGCM/grid/dimensions.h
535	else
536	exit
537	fi
538	fi
539
540
541	cd $LIBFGCM/grid/dimension
542	./makdim $dim
543	if (($? != 0))
544	then
545	exit 1
546	fi
547
548	cat $LIBFGCM/grid/dimensions.h
549	cd $LMDGCM
550
551	if [[ "$bands" != "" ]]
552	then
553	# Generic model, recreate bands.h (IR & VIS bands for radiative transfer)
554	makbandsarg=$(echo $bands \| sed -e 's/[^0-9]/ /g')
555	cd $LIBFGCM/phy$physique/bands
556	./makbands $makbandsarg
557	cat $LIBFGCM/phy$physique/bands.h
558	cd $LMDGCM
559	fi
560
561	if [[ "$scatterers" != "" ]]
562	then
563	if [[ -f $LIBFGCM/phy$physique/scatterers/make_scatterers ]]
564	then
565	# Generic model, recreate scatterers.h
566	cd $LIBFGCM/phy$physique/scatterers
567	./make_scatterers $scatterers
568	cat $LIBFGCM/phy$physique/scatterers.h
569	cd $LMDGCM
570	else
571	echo "Error: you should not use the -s # option with -p $physique"
572	exit
573	fi
574	fi
575
576
577	########################################################################
578	# Differentes dynamiques (3d, 2d, 1d)
579	########################################################################
580
581	dimension=`echo $dim \| wc -w`
582	echo dimension $dimension
583
584	if (( $dimension == 3 ))
585	then
586	cd $LIBFGCM/grid
587	\rm fxyprim.h
588	cp -p fxy_${grille}.h fxyprim.h
589	#else
590	# echo "Probleme dans les dimensions de la dynamique !!"
591	# echo "Non reactive pour l'instant !!!"
592	fi
593
594	if (( $dimension == 1 ))
595	then
596	## Sanity check: 1D models should be used in serial
597	if [[ $parallel != "none" ]]
598	then
599	echo "Error: a 1D model should not be compiled with "
600	echo " -parallel [mpi\|omp\|mpi_omp] option!"
601	exit
602	fi
603	CPP_KEY="$CPP_KEY CPP_1D"
604	##in 1D, add dyn3d to include path (because main prog is in physics)
605	INCLUDE_DIR="$INCLUDE_DIR -Ilibf/dyn3d -Ilibf/dyn3d_common"
606	## no filtre in 1d:
607	FILTRE_PATH=$LMDGCM/.void_dir
608	## no need to compile all routines in dyn3d_common either:
609	DYN_COMMON_PATH=$LMDGCM/.void_dir
610	## no need to compile all routines in dynlmdz_phy... ;
611	## (because key ones are included in 1D main program)
612	DYN_PHYS_PATH=$LMDGCM/.void_dir
613	DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir
614	fi
615
616	######################################################################
617	# Traitement special pour le nouveau rayonnement de Laurent Li.
618	# ---> YM desactive pour le traitemement en parallele
619	######################################################################
620
621	#if [[ -f $libf/phy$physique/raddim.h ]]
622	#then
623	# if [[ -f $libf/phy$physique/raddim.$dimh.h ]]
624	#then
625	# \rm -f $libf/phy$physique/raddim.h
626	# cp -p $libf/phy$physique/raddim.$dimh.h $libf/phy$physique/raddim.h
627	# echo $libf/phy$physique/raddim.$dimh.h
628	# cat $libf/phy$physique/raddim.h
629	# else
630	# echo On peut diminuer la taille de l executable en creant
631	# echo le fichier $libf/phy$physique/raddim.$dimh.h
632	# \cp -p $libf/phy$physique/raddim.defaut.h $libf/phy$physique/raddim.h
633	# fi
634	#fi
635
636	######################################################################
637	# Gestion du filtre qui n'existe qu'en 3d.
638	######################################################################
639
640	if (( `expr $dimc \> 2` == 1 ))
641	then
642	filtre="FILTRE=$filtre"
643	else
644	filtre="FILTRE= L_FILTRE= "
645	fi
646	echo MACRO FILTRE $filtre
647
648	echo $dimc
649
650
651
652	######################################################################
653	# Creation du suffixe de la configuration
654	######################################################################
655
656
657	SUFF_NAME=_${dim_full}
658	SUFF_NAME=${SUFF_NAME}_phy${physique}
659
660	if [[ "$bands" != "" ]]
661	then
662	#if bands option -b VISxIR is used, add "_bVISxIR" to executable name
663	SUFF_NAME=${SUFF_NAME}_b$bands
664	fi
665
666	if [[ "$parallel" != "none" ]]
667	then
668	SUFF_NAME=${SUFF_NAME}_para
669	DYN=dyn${dimc}d${paramem}
670	if [[ "$paramem" == "mem" ]]
671	then
672	SUFF_NAME=${SUFF_NAME}_${paramem}
673	fi
674	else
675	SUFF_NAME=${SUFF_NAME}_seq
676	if (( $dimension == 1 ))
677	then
678	# dynamics-related routines in"dyn1d" subdirectory of phy${physique}
679	DYN=phy${physique}/dyn1d
680	else
681	DYN=dyn${dimc}d
682	fi
683	fi
684
685	if [[ $veget != "false" ]]
686	then
687	SUFF_NAME=${SUFF_NAME}_orch
688	fi
689
690	if [[ $couple != "false" ]]
691	then
692	SUFF_NAME=${SUFF_NAME}_couple
693	fi
694
695	if [[ $chimie == "INCA" ]]
696	then
697	SUFF_NAME=${SUFF_NAME}_inca
698	fi
699
700	if [[ $libphy == "true" ]]
701	then
702	# special case where we compile only the physics
703	DYN=$LMDGCM/.void_dir
704	DYN_COMMON_PATH=$LMDGCM/.void_dir
705	FILTRE_PATH=$LMDGCM/.void_dir
706	DYN_PHYS_PATH=$LMDGCM/.void_dir
707	DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir
708	#and there is no main program to generate
709	code=""
710	SUFF_NAME=""
711	else
712	SUFF_NAME=${SUFF_NAME}.e
713	fi
714
715	cd $LMDGCM
716	config_fcm="config.fcm"
717	rm -f $config_fcm
718	touch $config_fcm
719
720	echo "%ARCH $arch" >> $config_fcm
721	echo "%INCDIR $INCLUDE_DIR" >> $config_fcm
722	echo "%LIB $LIB" >> $config_fcm
723	echo "%ROOT_PATH $PWD" >> $config_fcm
724	echo "%LIBF $LIBFGCM" >> $config_fcm
725	echo "%LIBO $LIBOGCM" >> $config_fcm
726	echo "%DYN $DYN" >> $config_fcm
727	echo "%DYN_COMMON $DYN_COMMON_PATH" >> $config_fcm
728	echo "%PHY_COMMON $PHY_COMMON_PATH" >> $config_fcm
729	echo "%FILTRE $FILTRE_PATH" >> $config_fcm
730	echo "%PHYS phy${physique}" >> $config_fcm
731	echo "%DYN_PHYS $DYN_PHYS_PATH" >> $config_fcm
732	echo "%DYN_PHYS_SUB $DYN_PHYS_SUB_PATH" >> $config_fcm
733	echo "%RRTM $RRTM_PATH" >> $config_fcm
734	echo "%DUST $DUST_PATH" >> $config_fcm
735	echo "%STRATAER $STRATAER_PATH" >> $config_fcm
736	echo "%SISVAT $SISVAT_PATH" >> $config_fcm
737	echo "%COSP $COSP_PATH" >> $config_fcm
738	echo "%CHEM $CHEM_PATH" >> $config_fcm
739	echo "%CLOUD $CLOUD_PATH" >> $config_fcm
740	echo "%MUPHY $MUPHY_PATH" >> $config_fcm
741	echo "%AERONO $AERONO_PATH" >> $config_fcm
742	echo "%EVOLUTION $EVOLUTION_PATH" >> $config_fcm
743	echo "%CPP_KEY $CPP_KEY" >> $config_fcm
744	echo "%EXEC $code" >> $config_fcm
745	echo "%SUFF_NAME $SUFF_NAME" >> $config_fcm
746	echo "%COMPIL_FFLAGS $COMPIL_FFLAGS" >> $config_fcm
747	echo "%PARA_FFLAGS $PARA_FFLAGS" >> $config_fcm
748	echo "%PARA_LD $PARA_LD" >> $config_fcm
749	echo "%EXT_SRC $EXT_SRC" >> $config_fcm
750
751	# setup arch.fcm and arch.opt
752	rm -f arch.fcm
753	rm -f arch.opt
754	ln -s arch/arch-${arch}.fcm arch.fcm
755	if test -f arch/arch-${arch}.opt && [ $compil_mod = "prod" ]
756	then
757	ln -s arch/arch-${arch}.opt arch.opt
758	else
759	ln -s .void_file arch.opt
760	fi
761
762	# cleanup before compiling
763	rm -f bin/${code}${SUFF_NAME}.e
764	rm -f $LIBOGCM/${arch}${SUFF_NAME}/.config/fcm.bld.lock
765	./build_gcm ${fcm_path} -j $job $full
766
767	rm -rf tmp_src
768	rm -rf config
769	ln -s $LIBOGCM/${arch}${SUFF_NAME}/.config config
770	ln -s $LIBOGCM/${arch}${SUFF_NAME}/.config/ppsrc tmp_src
771
772
773	if [[ -r $LIBFGCM/grid/dimensions.h ]]
774	then
775	# Cleanup: remove dimension.h file
776	\rm -f $LIBFGCM/grid/dimensions.h
777	fi

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