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source: trunk/LMDZ.COMMON/makelmdz_fcm @ 3493

Last change on this file since 3493 was 3484, checked in by afalco, 5 weeks ago
ICOSA_LMDZ: overall compilation stops when compilation of a module fails. Errors from internal calls in compilation scripts are transferred to the scripts above. AF
File size: 23.5 KB

Rev	Line
[1]	1	#!/bin/bash
[847]	2	# $Id: makelmdz_fcm 1615 2012-02-10 15:42:26Z emillour $
[2339]	3	# This is a script in Bash to compile the GCM and related tools
[1]	4	#
	5	##set -x
[2339]	6	set -e
[1]	7	########################################################################
	8	# options par defaut pour la commande make
	9	########################################################################
	10
	11	dim="96x72x19"
	12	physique=lmd
	13	filtre=filtrez
	14	grille=reg
	15	couple=false
	16	veget=false
[1300]	17	sisvat=false
[1302]	18	rrtm=false
[1650]	19	dust=false
	20	strataer=false
[1]	21	chimie=false
[895]	22	chemistry=false
[1]	23	parallel=none
[979]	24	paramem="par"
[1]	25	compil_mod=prod
	26	io=ioipsl
	27	LIBPREFIX=""
	28	cosp=false
[957]	29	bands=""
	30	scatterers=""
[1019]	31	job=1
	32	full=''
[1540]	33	libphy=false
[1]	34
[1650]	35	arch_defined="FALSE"
	36	arch_path="arch"
	37	arch_default_path="arch"
	38
[1]	39	LMDGCM=`/bin/pwd`
	40	LIBOGCM=$LMDGCM/libo
	41	LIBFGCM=$LMDGCM/libf
[1403]	42	DYN_COMMON_PATH=$LIBFGCM/dyn3d_common
[895]	43	# path for optional packages, but default set to ".void_dir"
[1403]	44	FILTRE_PATH=$LMDGCM/.void_dir
	45	DYN_PHYS_PATH=$LMDGCM/.void_dir
	46	DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir
[1521]	47	PHY_COMMON_PATH=$LMDGCM/.void_dir
[1302]	48	RRTM_PATH=$LMDGCM/.void_dir
[1650]	49	DUST_PATH=$LMDGCM/.void_dir
	50	STRATAER_PATH=$LMDGCM/.void_dir
[1302]	51	SISVAT_PATH=$LMDGCM/.void_dir
[1]	52	COSP_PATH=$LMDGCM/.void_dir
[895]	53	CHEM_PATH=$LMDGCM/.void_dir
[1661]	54	CLOUD_PATH=$LMDGCM/.void_dir
[1793]	55	MUPHY_PATH=$LMDGCM/.void_dir
[1107]	56	AERONO_PATH=$LMDGCM/.void_dir
[2778]	57	EVOLUTION_PATH=$LMDGCM/.void_dir
[895]	58	# Path to fcm utility:
[1019]	59	##fcm_path=$LMDGCM/tools/fcm/bin
[1860]	60	##fcm_path=/planeto/mturbet/planeto2-mturbet/FCM_V1.2/bin
[1841]	61	fcm_path=$(dirname $(which fcm))
[1]	62
	63	########################################################################
	64	# Quelques initialisations de variables du shell.
	65	########################################################################
	66
[3471]	67	CPP_KEY=""
[2645]	68	INCLUDE_DIR=""
[1]	69	LIB=""
	70	adjnt=""
	71	COMPIL_FFLAGS="%PROD_FFLAGS"
	72	PARA_FFLAGS=""
	73	PARA_LD=""
	74	EXT_SRC=""
	75
	76	########################################################################
	77	# lecture des options de mymake
	78	########################################################################
	79
	80	while (($# > 0))
	81	do
	82	case $1 in
	83	"-h") cat <<fin
	84	Usage :
[2339]	85	makelmdz_fcm [options] -arch arch_name exec
[957]	86	[-h] : brief help
	87	[-d [[IMx]JMx]LM] : IM, JM, LM are the dimensions in x, y, z (default: $dim)
	88	[-s nscat] : (Generic) Number of radiatively active scatterers
	89	[-b IRxVIS] : (Generic) Number of infrared (IR) and visible (VIS) bands for radiative transfer
	90	[-p PHYS] : set of physical parametrizations (in libf/phyPHYS), (default: lmd)
	91	[-prod / -dev / -debug] : compilation mode production (default) / developement / debug .
[1650]	92	[-c false/MPI1/OMCT] : (Earth) coupling with ocean model : MPI1/OMCT/false (default: false)
	93	[-v false/orchidee2.0/orchidee1.9/true] : (Earth) version of the vegetation model to include (default: false)
[1019]	94	false : no vegetation model
	95	orchidee2.0 : compile using ORCHIDEE 2.0 (or more recent version)
	96	orchidee1.9 : compile using ORCHIDEE up to the version including OpenMP in ORCHIDEE : tag 1.9-1.9.5(version AR5)-1.9.6
	97	true : (obsolete; for backward compatibility) use ORCHIDEE tag 1.9-1.9.6
[957]	98	[-chimie INCA/false] : (Earth) with INCA chemistry model or without (default: false)
[2339]	99	[-cosp true/false] : (Earth) add the cosp model (default: false)
[1403]	100	[-sisvat true/false] : (Earth) compile with/without sisvat package (default: false)
	101	[-rrtm true/false] : (Earth) compile with/without rrtm package (default: false)
[1650]	102	[-dust true/false] : (Earth) compile with/without the dust package by Boucher and co (default: false)
	103	[-strataer true/false] : (Earth) compile with/without the strat aer package by Boucher and co (default: false)
[957]	104	[-parallel none/mpi/omp/mpi_omp] : parallelism (default: none) : mpi, openmp or mixted mpi_openmp
	105	[-g GRI] : grid configuration in dyn3d/GRI_xy.h (default: reg, inclues a zoom)
[1391]	106	[-io ioipsl/mix/xios] : Input/Output library (default: ioipsl)
[957]	107	[-include INCLUDES] : extra include path to add
	108	[-cpp CPP_KEY] : additional preprocessing definitions
	109	[-adjnt] : adjoint model, not operational ...
[979]	110	[-mem] : reduced memory dynamics (if in parallel mode)
[957]	111	[-filtre NOMFILTRE] : use filtre from libf/NOMFILTRE (default: filtrez)
	112	[-link LINKS] : additional links with other libraries
[1019]	113	[-j n] : active parallel compiling on ntask
[1107]	114	[-full] : full (re-)compilation (from scratch)
[2339]	115	[-libphy] : only compile physics package (no dynamics or main program)
[957]	116	[-fcm_path path] : path to the fcm tool (default: tools/fcm/bin)
	117	[-ext_src path] : path to an additional set of routines to compile with the model
[1650]	118	[-arch_path path] : path to architecture files (default: $arch_default_path)
[3471]	119	-arch arch : target architecture
[957]	120	exec : executable to build
[1]	121	fin
	122	exit;;
	123
	124	"-d")
	125	dim=$2 ; shift ; shift ;;
[3471]	126
[1]	127	"-p")
	128	physique="$2" ; shift ; shift ;;
	129
[957]	130	"-s")
	131	scatterers=$2 ; shift ; shift ;;
	132
	133	"-b")
	134	bands=$2 ; shift ; shift ;;
	135
[1]	136	"-g")
	137	grille="$2" ; shift ; shift ;;
	138
	139	"-c")
	140	couple="$2" ; shift ; shift ;;
	141
	142	"-prod")
	143	compil_mod="prod" ; shift ;;
	144
	145	"-dev")
	146	compil_mod="dev" ; shift ;;
	147
	148	"-debug")
	149	compil_mod="debug" ; shift ;;
	150
	151	"-io")
	152	io="$2" ; shift ; shift ;;
	153
	154	"-v")
	155	veget="$2" ; shift ; shift ;;
	156
[1300]	157	"-sisvat")
	158	sisvat="$2" ; shift ; shift ;;
	159
[1302]	160	"-rrtm")
	161	rrtm="$2" ; shift ; shift ;;
	162
[1650]	163	"-dust")
	164	dust="$2" ; shift ; shift ;;
	165
	166	"-strataer")
	167	strataer="$2" ; shift ; shift ;;
	168
[1]	169	"-chimie")
	170	chimie="$2" ; shift ; shift ;;
	171
	172	"-parallel")
	173	parallel="$2" ; shift ; shift ;;
[3471]	174
[1]	175	"-include")
[2645]	176	INCLUDE_DIR="$INCLUDE_DIR -I$2" ; shift ; shift ;;
[1]	177
	178	"-cpp")
	179	CPP_KEY="$CPP_KEY $2" ; shift ; shift ;;
	180
	181	"-adjnt")
[3484]	182	echo "not operational ... work to be done here ";exit 1
[1]	183	opt_dep="$opt_dep adjnt" ; adjnt="-ladjnt -ldyn3d "
	184	optim="$optim -Dadj" ; shift ;;
	185
	186	"-cosp")
	187	cosp="$2" ; shift ; shift ;;
	188
[979]	189	"-mem")
	190	paramem="mem" ; shift ;;
[1]	191
	192	"-filtre")
	193	filtre=$2 ; shift ; shift ;;
	194
	195	"-link")
	196	LIB="$LIB $2" ; shift ; shift ;;
	197
	198	"-fcm_path")
	199	fcm_path=$2 ; shift ; shift ;;
	200
	201	"-ext_src")
	202	EXT_SRC=$2 ; shift ; shift ;;
	203
[1019]	204	"-j")
	205	job=$2 ; shift ; shift ;;
	206
	207	"-full")
	208	full="-full" ; shift ;;
	209
[1540]	210	"-libphy")
	211	libphy="true" ; shift ;;
	212
[1]	213	"-arch")
[1650]	214	arch=$2 ; arch_defined="TRUE" ; shift ; shift ;;
[1]	215
[1650]	216	"-arch_path")
	217	arch_path=$2 ; arch_path_defined="TRUE"; shift ; shift ;;
	218
[1]	219	*)
	220	code="$1" ; shift ;;
	221	esac
	222	done
	223
	224	###############################################################
[3471]	225	# path to fcm
[1]	226	###############################################################
[979]	227	# handle case when provided path to fcm was given as a relative
	228	# path (from makelmdz_fcm script directory) and not an absolute path
	229	if [[ ${fcm_path:0:1} != "/" ]] ; then
	230	# prepend with makelmdz_fcm location
	231	fcm_path=$(cd $(dirname $0) ; pwd)"/"${fcm_path}
	232	fi
	233
	234	# add fcm_path to PATH
[847]	235	export PATH=${fcm_path}:${PATH}
[1]	236
[979]	237	echo "Path to fcm:"
	238	echo ${fcm_path}
[1]	239
[2339]	240	#################################
	241	# setup arch.env and arch.path #
	242	#################################
[1]	243	rm -f .void_file
	244	echo > .void_file
	245	rm -rf .void_dir
	246	mkdir .void_dir
	247
[1650]	248	if [[ "$arch_defined" == "TRUE" ]]
	249	then
	250	rm -f arch.path
	251	rm -f arch.env
	252
	253	if test -f $arch_path/arch-${arch}.path
	254	then
	255	ln -s $arch_path/arch-${arch}.path arch.path
	256	elif test -f $arch_default_path/arch-${arch}.path
	257	then
	258	ln -s $arch_default_path/arch-${arch}.path arch.path
	259	fi
[3471]	260
[1650]	261	if test -f $arch_path/arch-${arch}.env
	262	then
	263	ln -s $arch_path/arch-${arch}.env arch.env
	264	elif test -f $arch_default_path/arch-${arch}.env
	265	then
	266	ln -s $arch_default_path/arch-${arch}.env arch.env
	267	else
	268	ln -s .void_file arch.env
	269	fi
	270	# source architecture PATH and ENV files
	271	source arch.env
	272	source arch.path
	273	else
	274	echo "You must define a target architecture"
	275	exit 1
	276	fi
	277
[1]	278	########################################################################
	279	# Definition des clefs CPP, des chemins des includes et modules
	280	# et des libraries
	281	########################################################################
	282
	283	if [[ "$compil_mod" == "prod" ]]
	284	then
	285	COMPIL_FFLAGS="%PROD_FFLAGS"
	286	elif [[ "$compil_mod" == "dev" ]]
	287	then
	288	COMPIL_FFLAGS="%DEV_FFLAGS"
	289	elif [[ "$compil_mod" == "debug" ]]
	290	then
	291	COMPIL_FFLAGS="%DEBUG_FFLAGS"
	292	fi
	293
[1403]	294	phys_root=$physique
	295	if [[ "${physique:0:3}" == "lmd" ]] ; then phys_root=lmd ; fi
	296	if [[ "${physique:0:3}" == "mar" ]] ; then phys_root=mar ; fi
	297	if [[ "${physique:0:4}" == "mars" ]] ; then phys_root=mars ; fi
	298	if [[ "${physique:0:3}" == "std" ]] ; then phys_root=std ; fi
	299	if [[ "${physique:0:5}" == "venus" ]] ; then phys_root=venus ; fi
	300	if [[ "${physique:0:5}" == "titan" ]] ; then phys_root=titan ; fi
	301	if [[ "${physique:0:3}" == "dev" ]] ; then phys_root=dev ; fi
	302
[1]	303	if [[ "$physique" != "nophys" ]]
	304	then
[847]	305	#We'll use some physics
[37]	306	CPP_KEY="$CPP_KEY CPP_PHYS"
[1403]	307	if [[ "${phys_root}" == "lmd" ]]
[847]	308	then
	309	#For lmd physics, default planet type is Earth
[1]	310	CPP_KEY="$CPP_KEY CPP_EARTH"
[847]	311	fi
[1521]	312	# set physics common utilities path
	313	PHY_COMMON_PATH="${LIBFGCM}/phy_common"
[1403]	314	# set the dyn/phys interface path
[1540]	315	DYN_PHYS_PATH="${LIBFGCM}/dynphy_lonlat"
	316	DYN_PHYS_SUB_PATH="${LIBFGCM}/dynphy_lonlat/phy${phys_root}"
[1]	317	fi
	318
[1403]	319	if [[ "$filtre" == "filtrez" ]]
	320	then
	321	FILTRE_PATH=${LIBFGCM}/$filtre
	322	fi
	323
[1]	324	if [[ "$chimie" == "INCA" ]]
	325	then
	326	CPP_KEY="$CPP_KEY INCA"
[2645]	327	INCLUDE_DIR="$INCLUDE_DIR -I${INCA_INCDIR}"
[1695]	328	LIB="$LIB -L${INCA_LIBDIR} ${INCA_LIB}"
[1]	329	fi
	330
	331	if [[ "$couple" != "false" ]]
	332	then
[1302]	333	if [[ "$couple" == "MPI1" ]]
	334	then
	335	CPP_KEY="$CPP_KEY CPP_COUPLE"
	336	export OASIS_INCDIR=$LMDGCM/../../prism/X64/build/lib/psmile.MPI1
	337	export OASIS_LIBDIR=$LMDGCM/../../prism/X64/lib
[2645]	338	INCLUDE_DIR="$INCLUDE_DIR -I${OASIS_INCDIR}"
[1695]	339	LIB="$LIB -L${OASIS_LIBDIR} ${OASIS_LIB}"
[1302]	340	else
	341	CPP_KEY="$CPP_KEY CPP_COUPLE CPP_OMCT"
[2645]	342	INCLUDE_DIR="$INCLUDE_DIR -I${OASIS_INCDIR}"
[1695]	343	LIB="$LIB -L${OASIS_LIBDIR} ${OASIS_LIB}"
[1302]	344	fi
[1]	345	fi
	346
[1530]	347	if [[ "$parallel" != "none" && \
	348	( "$code" == "newstart" \|\| "$code" == "start2archive" ) ]]
	349	then
	350	echo "newstart or start2archive utilities should be run in serial!"
	351	echo " Compile without -parallel [mpi\|omp\|mpi_omp] option!"
[3484]	352	exit 1
[1530]	353	fi
	354
[1]	355	if [[ "$parallel" == "mpi" ]]
	356	then
	357	CPP_KEY="$CPP_KEY CPP_PARA CPP_MPI"
	358	PARA_FFLAGS="%MPI_FFLAGS"
	359	PARA_LD="%MPI_LD"
	360	elif [[ "$parallel" == "omp" ]]
	361	then
	362	CPP_KEY="$CPP_KEY CPP_PARA CPP_OMP"
	363	PARA_FFLAGS="%OMP_FFLAGS"
	364	PARA_LD="%OMP_LD"
	365	elif [[ "$parallel" == "mpi_omp" ]]
	366	then
	367	CPP_KEY="$CPP_KEY CPP_PARA CPP_MPI CPP_OMP"
	368	PARA_FFLAGS="%MPI_FFLAGS %OMP_FFLAGS"
	369	PARA_LD="%MPI_LD %OMP_LD"
	370	fi
	371
	372	if [[ ( "$parallel" == "omp" \|\| "$parallel" == "mpi_omp" ) \
	373	&& "$compil_mod" == "debug" ]]
	374	then
	375	echo "Usually, parallelization with OpenMP requires some optimization."
	376	echo "We suggest switching to \"-dev\"."
	377	fi
	378
[1019]	379	if [ "$veget" = "true" -o "$veget" = "orchidee1.9" -o "$veget" = "orchidee2.0" ]
[1]	380	then
[1019]	381	#NB: option 'true': for backward compatibility. To be used with ORCHIDEE tag 1.9-1.9.6
	382	# For this case, cpp flag ORCHIDEE_NOOPENMP must be added to the makelmdz_fcm arguments
	383	# option orchidee1.9 : Compile with ORCHIDEE version up to the inclusion of OpenMP in ORCHIDEE : tag 1.9-1.9.5(version AR5)-1.9.6
[2645]	384	INCLUDE_DIR="${INCLUDE_DIR} ${ORCHIDEE_INCDIR}"
[1]	385	CPP_KEY="$CPP_KEY CPP_VEGET"
[1019]	386	# temporary, for Orchidee versions 1.9.* (before openmp activation)
	387	if [[ "$veget" == "orchidee1.9" ]] ; then
	388	CPP_KEY="$CPP_KEY ORCHIDEE_NOOPENMP"
	389	fi
	390	if [[ "$veget" == "orchidee2.0" ]] ; then
[1300]	391	orch_libs="sechiba parameters stomate parallel orglob orchidee"
[1019]	392	else
	393	orch_libs="sechiba parameters stomate parallel orglob"
	394	fi
[1695]	395	LIB="${LIB} -L${ORCHIDEE_LIBDIR} ${ORCHIDEE_LIB}"
[1019]	396	elif [[ "$veget" != "false" ]] ; then
	397	echo "Option -v $veget does not exist"
	398	echo "Use ./makelmdz_fcm -h for more information"
[3484]	399	exit 1
[1]	400	fi
	401
[1300]	402	if [[ "$sisvat" == "true" ]]
	403	then
	404	CPP_KEY="$CPP_KEY CPP_SISVAT"
[1302]	405	SISVAT_PATH="$LIBFGCM/%PHYS/sisvat"
[1300]	406	fi
	407
[1302]	408	if [[ "$rrtm" == "true" ]]
	409	then
	410	CPP_KEY="$CPP_KEY CPP_RRTM"
	411	RRTM_PATH="$LIBFGCM/%PHYS/rrtm"
	412	fi
	413
[1650]	414	if [[ "$dust" == "true" ]]
	415	then
	416	CPP_KEY="$CPP_KEY CPP_Dust"
	417	DUST_PATH="$LIBFGCM/%PHYS/Dust"
	418	fi
	419
	420	if [[ "$strataer" == "true" ]]
	421	then
	422	CPP_KEY="$CPP_KEY CPP_StratAer"
	423	STRATAER_PATH="$LIBFGCM/%PHYS/StratAer"
	424	fi
	425
[1]	426	if [[ $io == ioipsl ]]
	427	then
	428	CPP_KEY="$CPP_KEY CPP_IOIPSL"
[2645]	429	INCLUDE_DIR="$INCLUDE_DIR ${IOIPSL_INCDIR}"
[1695]	430	LIB="$LIB ${IOIPSL_LIBDIR} ${IOIPSL_LIB}"
[1391]	431	elif [[ $io == mix ]]
[1300]	432	then
	433	# For now, xios implies also using ioipsl
	434	CPP_KEY="$CPP_KEY CPP_IOIPSL CPP_XIOS"
[2645]	435	INCLUDE_DIR="$INCLUDE_DIR ${IOIPSL_INCDIR} ${XIOS_INCDIR}"
[1695]	436	LIB="$LIB ${IOIPSL_LIBDIR} ${IOIPSL_LIB} ${XIOS_LIBDIR} ${XIOS_LIB}"
[1391]	437	elif [[ $io == xios ]]
	438	then
	439	# For now, xios implies also using ioipsl
	440	CPP_KEY="$CPP_KEY CPP_IOIPSL CPP_XIOS CPP_IOIPSL_NO_OUTPUT"
[2645]	441	INCLUDE_DIR="$INCLUDE_DIR ${IOIPSL_INCDIR} ${XIOS_INCDIR}"
[1695]	442	LIB="$LIB ${IOIPSL_LIBDIR} ${IOIPSL_LIB} ${XIOS_LIBDIR} ${XIOS_LIB}"
[1]	443	fi
[895]	444
[1]	445	if [[ "$cosp" == "true" ]]
	446	then
	447	CPP_KEY="$CPP_KEY CPP_COSP"
	448	COSP_PATH="$LIBFGCM/cosp"
	449	# LIB="${LIB} -l${LIBPREFIX}cosp"
	450	fi
	451
[1403]	452	# for Titan (but could be used by others as well), there is also "chimtitan"
	453	if [[ -d ${LIBFGCM}/chim${physique} ]]
[895]	454	then
	455	CHEM_PATH="${LIBFGCM}/chim${physique}"
[2645]	456	INCLUDE_DIR="$INCLUDE_DIR -I${LIBFGCM}/chim${physique}"
[895]	457	fi
	458
[1793]	459	# for Titan add microphysics dependencies
	460	if [[ -d ${LIBFGCM}/muphy${physique} ]] ; then
[2369]	461	if ! [ `echo $CPP_KEY \| grep -c "OLD_COMPILO"` -gt 0 ] ; then
	462	# add muphy{physique} to the list of files to compile.
	463	MUPHY_PATH="${LIBFGCM}/muphy${physique}"
	464	# For Titan as we embbed some libraries with CPP keys, we define them:
	465	# -DPREC={32\|64\|80} real kind precision (32: simple, 64: double, 80: extended double)
	466	# -DHAVE_NC_FTN=1 (mandatory: for support of NetCDF in lintnd).
	467	CPP_KEY="$CPP_KEY PREC=64 HAVE_NC_FTN=1"
	468	if [[ "${physique}" == "titan" ]] ; then
	469	echo "Yaahh you're about to use YAMMS in a GCM..."
	470	fi
[1793]	471	fi
	472	fi
	473
[1661]	474	# for Venus (but could be used by others as well), there is also "phyvenus/cloudvenus"
	475	if [[ -d ${LIBFGCM}/phy${physique}/cloud${physique} ]]
	476	then
	477	CLOUD_PATH="${LIBFGCM}/phy${physique}/cloud${physique}"
[2645]	478	INCLUDE_DIR="$INCLUDE_DIR -I${LIBFGCM}/phy${physique}/cloud${physique}"
[1661]	479	fi
	480
[1107]	481	# for Mars (but could be used by others as well), there is also "aeronomars"
	482	if [[ -d ${LIBFGCM}/aerono${physique} ]]
	483	then
	484	AERONO_PATH="${LIBFGCM}/aerono${physique}"
[2645]	485	INCLUDE_DIR="$INCLUDE_DIR -I${LIBFGCM}/aerono${physique}"
[1107]	486	fi
	487
[2781]	488	if [[ -d ${LIBFGCM}/evolution && "$code" == "pem" ]]
[2778]	489	then
[2985]	490	if [[ "$physique" == "std" ]]
	491	then
	492	CPP_KEY="$CPP_KEY CPP_STD"
	493	fi
[2778]	494	EVOLUTION_PATH="${LIBFGCM}/evolution"
	495	INCLUDE="$INCLUDE -I${LIBFGCM}/evolution"
	496	fi
	497
[2985]	498	if [[ -d ${LIBFGCM}/evolution && "$code" == "reshape_XIOS_output" ]]
	499	then
	500	if [[ "$physique" == "std" ]]
	501	then
	502	CPP_KEY="$CPP_KEY CPP_STD"
	503	fi
	504	EVOLUTION_PATH="${LIBFGCM}/evolution"
	505	INCLUDE="$INCLUDE -I${LIBFGCM}/evolution"
	506	fi
	507
	508
[1695]	509	# NETCDF library include/library paths
[2645]	510	INCLUDE_DIR="$INCLUDE_DIR ${NETCDF_INCDIR}"
[1695]	511	LIB="$LIB ${NETCDF_LIBDIR} ${NETCDF_LIB}"
[270]	512
[1]	513	########################################################################
	514	# calcul du nombre de dimensions
	515	########################################################################
	516
	517
	518	dim_full=$dim
[3471]	519	dim=`echo $dim \| sed -e 's/[^0-9]/ /g'`
[1]	520	set $dim
	521	dimc=$#
	522	echo calcul de la dimension
	523	echo dim $dim
	524	echo dimc $dimc
	525
	526
	527	########################################################################
	528	# Gestion des dimensions du modele.
	529	# on cree ou remplace le fichier des dimensions
	530	########################################################################
	531
[979]	532	cd $LIBFGCM/grid
	533	if [[ -f dimensions.h ]]
	534	then
	535	echo 'ATTENTION: vous etes sans doute en train de compiler le modele par ailleurs'
	536	echo "Attendez que la premiere compilation soit terminee pour relancer la suivante."
	537	echo "Si vous etes sur que vous ne compilez pas le modele par ailleurs,"
	538	echo vous pouvez continuer en repondant oui.
	539	echo "Voulez-vous vraiment continuer?"
	540	echo ""
	541	echo "WARNING: you are probably already compiling the model somewhere else."
	542	echo "Wait until the first compilation is finished before launching this one."
	543	echo "If you are sure that you are not compiling elsewhere, just answer "
	544	echo "yes (or 'oui') to the question below to proceed."
	545	echo "Do you wish to continue?"
	546	read reponse
	547	if [[ $reponse == "oui" \|\| $reponse == "yes" ]]
	548	then
	549	\rm -f $LIBFGCM/grid/dimensions.h
	550	else
[3484]	551	exit 1
[979]	552	fi
	553	fi
	554
	555
[1]	556	cd $LIBFGCM/grid/dimension
	557	./makdim $dim
[1441]	558	if (($? != 0))
	559	then
	560	exit 1
	561	fi
	562
[1]	563	cat $LIBFGCM/grid/dimensions.h
	564	cd $LMDGCM
	565
[957]	566	if [[ "$bands" != "" ]]
[847]	567	then
[957]	568	# Generic model, recreate bands.h (IR & VIS bands for radiative transfer)
[2967]	569	makbandsarg=$(echo $bands \| sed -e 's/[^0-9]/ /g')
[957]	570	cd $LIBFGCM/phy$physique/bands
[2967]	571	./makbands $makbandsarg
[957]	572	cat $LIBFGCM/phy$physique/bands.h
	573	cd $LMDGCM
[847]	574	fi
[1]	575
[957]	576	if [[ "$scatterers" != "" ]]
	577	then
[2441]	578	if [[ -f $LIBFGCM/phy$physique/scatterers/make_scatterers ]]
	579	then
	580	# Generic model, recreate scatterers.h
	581	cd $LIBFGCM/phy$physique/scatterers
	582	./make_scatterers $scatterers
	583	cat $LIBFGCM/phy$physique/scatterers.h
	584	cd $LMDGCM
	585	else
	586	echo "Error: you should not use the -s # option with -p $physique"
[3484]	587	exit 1
[2441]	588	fi
[957]	589	fi
	590
	591
[1]	592	########################################################################
	593	# Differentes dynamiques (3d, 2d, 1d)
	594	########################################################################
	595
	596	dimension=`echo $dim \| wc -w`
	597	echo dimension $dimension
	598
	599	if (( $dimension == 3 ))
	600	then
	601	cd $LIBFGCM/grid
	602	\rm fxyprim.h
	603	cp -p fxy_${grille}.h fxyprim.h
[895]	604	#else
	605	# echo "Probleme dans les dimensions de la dynamique !!"
	606	# echo "Non reactive pour l'instant !!!"
[1]	607	fi
	608
[895]	609	if (( $dimension == 1 ))
	610	then
[1530]	611	## Sanity check: 1D models should be used in serial
[2996]	612	## unless compiled with xios and then it should be in mpi only
	613	if [[ $io == xios ]]
[1530]	614	then
[2996]	615	echo "OK io xios"
	616	if [[ $parallel != "mpi" ]]
	617	then
	618	echo "Error: a 1D model compiled with xios should also be compiled with "
	619	echo " -parallel mpi option!"
[3484]	620	exit 1
[2996]	621	fi
	622	else
	623	# no xios, check that it is in serial only
	624	if [[ $parallel != "none" ]]
	625	then
[1530]	626	echo "Error: a 1D model should not be compiled with "
	627	echo " -parallel [mpi\|omp\|mpi_omp] option!"
[3484]	628	exit 1
[2996]	629	fi
	630	fi # of if [[ $io == "xios" ]]
[1403]	631	CPP_KEY="$CPP_KEY CPP_1D"
[895]	632	##in 1D, add dyn3d to include path (because main prog is in physics)
[2645]	633	INCLUDE_DIR="$INCLUDE_DIR -Ilibf/dyn3d -Ilibf/dyn3d_common"
[1403]	634	## no filtre in 1d:
	635	FILTRE_PATH=$LMDGCM/.void_dir
	636	## no need to compile all routines in dyn3d_common either:
	637	DYN_COMMON_PATH=$LMDGCM/.void_dir
	638	## no need to compile all routines in dynlmdz_phy... ;
	639	## (because key ones are included in 1D main program)
	640	DYN_PHYS_PATH=$LMDGCM/.void_dir
	641	DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir
[895]	642	fi
	643
[1]	644	######################################################################
	645	# Traitement special pour le nouveau rayonnement de Laurent Li.
	646	# ---> YM desactive pour le traitemement en parallele
	647	######################################################################
	648
	649	#if [[ -f $libf/phy$physique/raddim.h ]]
	650	#then
	651	# if [[ -f $libf/phy$physique/raddim.$dimh.h ]]
	652	#then
	653	# \rm -f $libf/phy$physique/raddim.h
	654	# cp -p $libf/phy$physique/raddim.$dimh.h $libf/phy$physique/raddim.h
[3471]	655	# echo $libf/phy$physique/raddim.$dimh.h
[1]	656	# cat $libf/phy$physique/raddim.h
	657	# else
	658	# echo On peut diminuer la taille de l executable en creant
	659	# echo le fichier $libf/phy$physique/raddim.$dimh.h
	660	# \cp -p $libf/phy$physique/raddim.defaut.h $libf/phy$physique/raddim.h
	661	# fi
	662	#fi
	663
	664	######################################################################
	665	# Gestion du filtre qui n'existe qu'en 3d.
	666	######################################################################
	667
	668	if (( `expr $dimc \> 2` == 1 ))
	669	then
	670	filtre="FILTRE=$filtre"
	671	else
	672	filtre="FILTRE= L_FILTRE= "
	673	fi
	674	echo MACRO FILTRE $filtre
	675
	676	echo $dimc
	677
	678
	679
	680	######################################################################
	681	# Creation du suffixe de la configuration
	682	######################################################################
	683
	684
	685	SUFF_NAME=_${dim_full}
	686	SUFF_NAME=${SUFF_NAME}_phy${physique}
	687
[2967]	688	if [[ "$bands" != "" ]]
	689	then
	690	#if bands option -b VISxIR is used, add "_bVISxIR" to executable name
	691	SUFF_NAME=${SUFF_NAME}_b$bands
	692	fi
	693
[1]	694	if [[ "$parallel" != "none" ]]
	695	then
	696	SUFF_NAME=${SUFF_NAME}_para
[2996]	697	if (( $dimension == 1 ))
	698	then
[3471]	699	# dynamics-related routines in"dyn1d" subdirectory of phy${physique}
[2996]	700	DYN=phy${physique}/dyn1d
	701	else
	702	DYN=dyn${dimc}d${paramem}
	703	fi
[979]	704	if [[ "$paramem" == "mem" ]]
	705	then
	706	SUFF_NAME=${SUFF_NAME}_${paramem}
	707	fi
[1]	708	else
	709	SUFF_NAME=${SUFF_NAME}_seq
[1403]	710	if (( $dimension == 1 ))
	711	then
[3471]	712	# dynamics-related routines in"dyn1d" subdirectory of phy${physique}
[1403]	713	DYN=phy${physique}/dyn1d
	714	else
	715	DYN=dyn${dimc}d
[895]	716	fi
[1]	717	fi
	718
[1019]	719	if [[ $veget != "false" ]]
[1]	720	then
	721	SUFF_NAME=${SUFF_NAME}_orch
	722	fi
	723
	724	if [[ $couple != "false" ]]
	725	then
	726	SUFF_NAME=${SUFF_NAME}_couple
	727	fi
	728
	729	if [[ $chimie == "INCA" ]]
	730	then
	731	SUFF_NAME=${SUFF_NAME}_inca
	732	fi
[3475]	733	SUFF_DIR=
[3471]	734	if [[ "$compil_mod" == "debug" ]]
	735	then
[3475]	736	SUFF_DIR=_debug
[3471]	737	fi
[3475]	738	SUFF_DIR=${SUFF_NAME}
[1]	739
[1540]	740	if [[ $libphy == "true" ]]
	741	then
	742	# special case where we compile only the physics
	743	DYN=$LMDGCM/.void_dir
	744	DYN_COMMON_PATH=$LMDGCM/.void_dir
	745	FILTRE_PATH=$LMDGCM/.void_dir
	746	DYN_PHYS_PATH=$LMDGCM/.void_dir
	747	DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir
	748	#and there is no main program to generate
	749	code=""
	750	SUFF_NAME=""
	751	else
	752	SUFF_NAME=${SUFF_NAME}.e
	753	fi
	754
[1]	755	cd $LMDGCM
	756	config_fcm="config.fcm"
	757	rm -f $config_fcm
	758	touch $config_fcm
	759
	760	echo "%ARCH $arch" >> $config_fcm
[3471]	761	echo "%INCDIR $INCLUDE_DIR" >> $config_fcm
[1]	762	echo "%LIB $LIB" >> $config_fcm
	763	echo "%ROOT_PATH $PWD" >> $config_fcm
	764	echo "%LIBF $LIBFGCM" >> $config_fcm
	765	echo "%LIBO $LIBOGCM" >> $config_fcm
	766	echo "%DYN $DYN" >> $config_fcm
[1403]	767	echo "%DYN_COMMON $DYN_COMMON_PATH" >> $config_fcm
[1521]	768	echo "%PHY_COMMON $PHY_COMMON_PATH" >> $config_fcm
[1403]	769	echo "%FILTRE $FILTRE_PATH" >> $config_fcm
[1]	770	echo "%PHYS phy${physique}" >> $config_fcm
[1403]	771	echo "%DYN_PHYS $DYN_PHYS_PATH" >> $config_fcm
	772	echo "%DYN_PHYS_SUB $DYN_PHYS_SUB_PATH" >> $config_fcm
[1302]	773	echo "%RRTM $RRTM_PATH" >> $config_fcm
[1650]	774	echo "%DUST $DUST_PATH" >> $config_fcm
	775	echo "%STRATAER $STRATAER_PATH" >> $config_fcm
[1302]	776	echo "%SISVAT $SISVAT_PATH" >> $config_fcm
[1]	777	echo "%COSP $COSP_PATH" >> $config_fcm
[895]	778	echo "%CHEM $CHEM_PATH" >> $config_fcm
[1661]	779	echo "%CLOUD $CLOUD_PATH" >> $config_fcm
[1793]	780	echo "%MUPHY $MUPHY_PATH" >> $config_fcm
[1107]	781	echo "%AERONO $AERONO_PATH" >> $config_fcm
[2778]	782	echo "%EVOLUTION $EVOLUTION_PATH" >> $config_fcm
[1]	783	echo "%CPP_KEY $CPP_KEY" >> $config_fcm
	784	echo "%EXEC $code" >> $config_fcm
	785	echo "%SUFF_NAME $SUFF_NAME" >> $config_fcm
[3475]	786	echo "%SUFF_DIR $SUFF_DIR" >> $config_fcm
[1]	787	echo "%COMPIL_FFLAGS $COMPIL_FFLAGS" >> $config_fcm
	788	echo "%PARA_FFLAGS $PARA_FFLAGS" >> $config_fcm
	789	echo "%PARA_LD $PARA_LD" >> $config_fcm
	790	echo "%EXT_SRC $EXT_SRC" >> $config_fcm
	791
[2339]	792	# setup arch.fcm and arch.opt
	793	rm -f arch.fcm
	794	rm -f arch.opt
[1]	795	ln -s arch/arch-${arch}.fcm arch.fcm
	796	if test -f arch/arch-${arch}.opt && [ $compil_mod = "prod" ]
	797	then
	798	ln -s arch/arch-${arch}.opt arch.opt
	799	else
	800	ln -s .void_file arch.opt
	801	fi
	802
[2339]	803	# cleanup before compiling
[3481]	804	if [[ $libphy != "true" ]]; then
	805	rm -f bin/${code}${SUFF_NAME}
	806	fi
[1]	807	rm -f $LIBOGCM/${arch}${SUFF_NAME}/.config/fcm.bld.lock
[1019]	808	./build_gcm ${fcm_path} -j $job $full
[3484]	809	if [ $? != 0 ]; then # check if fcm command worked
	810	exit 1
	811	fi
[1]	812
	813	rm -rf tmp_src
	814	rm -rf config
	815	ln -s $LIBOGCM/${arch}${SUFF_NAME}/.config config
[1540]	816	ln -s $LIBOGCM/${arch}${SUFF_NAME}/.config/ppsrc tmp_src
[979]	817
[1300]	818
[979]	819	if [[ -r $LIBFGCM/grid/dimensions.h ]]
	820	then
	821	# Cleanup: remove dimension.h file
	822	\rm -f $LIBFGCM/grid/dimensions.h
	823	fi

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