source: trunk/LMDZ.COMMON/libf/evolution/pemetat0.F90 @ 3345

Last change on this file since 3345 was 3319, checked in by jbclement, 7 months ago

PEM:
Small correction about the dimension of an array.
JBC

File size: 27.2 KB
Line 
1MODULE pemetat0_mod
2
3implicit none
4
5!=======================================================================
6contains
7!=======================================================================
8
9SUBROUTINE pemetat0(filename,ngrid,nsoil_PCM,nsoil_PEM,nslope,timelen,timestep,TI_PEM,tsoil_PEM,ice_table,ice_table_thickness, &
10                    tsurf_avg_yr1,tsurf_avg_yr2,q_co2,q_h2o,ps_inst,tsoil_inst,tend_h2o_ice,tend_co2_ice,co2_ice,h2o_ice,      &
11                    global_avg_pressure,watersurf_avg,watersoil_avg,m_co2_regolith_phys,deltam_co2_regolith_phys,              &
12                    m_h2o_regolith_phys,deltam_h2o_regolith_phys,stratif)
13
14use iostart_PEM,                only: open_startphy, close_startphy, get_field, get_var, inquire_dimension, inquire_dimension_length
15use comsoil_h_PEM,              only: soil_pem, layer_PEM, mlayer_PEM, fluxgeo, inertiedat_PEM, ini_huge_h2oice, depth_breccia, depth_bedrock, index_breccia, index_bedrock
16use comsoil_h,                  only: volcapa, inertiedat
17use adsorption_mod,             only: regolith_adsorption, adsorption_pem
18use ice_table_mod,              only: computeice_table_equilibrium, icetable_equilibrium
19use constants_marspem_mod,      only: alpha_clap_h2o, beta_clap_h2o, TI_breccia, TI_bedrock
20use soil_thermalproperties_mod, only: update_soil_thermalproperties
21use tracer_mod,                 only: mmol, igcm_h2o_vap ! tracer names and molar masses
22use abort_pem_mod,              only: abort_pem
23use compute_soiltemp_mod,       only: ini_tsoil_pem, compute_tsoil_pem
24use comslope_mod,               only: def_slope_mean, subslope_dist
25use layering_mod,               only: layering, array2stratif, nb_str_max, layering_algo
26
27#ifndef CPP_STD
28    use comcstfi_h,   only: r, mugaz, pi
29    use surfdat_h,    only: watercaptag, watercap, perennial_co2ice
30#else
31    use comcstfi_mod, only: r, mugaz, pi
32#endif
33
34implicit none
35
36include "callkeys.h"
37
38character(*),                   intent(in) :: filename            ! name of the startfi_PEM.nc
39integer,                        intent(in) :: ngrid               ! # of physical grid points
40integer,                        intent(in) :: nsoil_PCM           ! # of vertical grid points in the PCM
41integer,                        intent(in) :: nsoil_PEM           ! # of vertical grid points in the PEM
42integer,                        intent(in) :: nslope              ! # of sub-grid slopes
43integer,                        intent(in) :: timelen             ! # time samples
44real,                           intent(in) :: timestep            ! time step [s]
45real,                           intent(in) :: global_avg_pressure ! mean average pressure on the planet [Pa]
46real, dimension(ngrid,nslope),  intent(in) :: tsurf_avg_yr1       ! surface temperature at the first year of PCM call [K]
47real, dimension(ngrid,nslope),  intent(in) :: tsurf_avg_yr2       ! surface temperature at the second  year of PCM call [K]
48real, dimension(ngrid,timelen), intent(in) :: q_co2               ! MMR tracer co2 [kg/kg]
49real, dimension(ngrid,timelen), intent(in) :: q_h2o               ! MMR tracer h2o [kg/kg]
50real, dimension(ngrid,timelen), intent(in) :: ps_inst             ! surface pressure [Pa]
51real, dimension(ngrid,nslope),  intent(in) :: tend_h2o_ice        ! tendencies on h2o ice
52real, dimension(ngrid,nslope),  intent(in) :: tend_co2_ice        ! tendencies on co2 ice
53real, dimension(ngrid,nslope),  intent(in) :: watersurf_avg       ! surface water ice density, yearly averaged (kg/m^3)
54! outputs
55real, dimension(ngrid),                          intent(out) :: deltam_co2_regolith_phys ! mass of co2 that is exchanged due to adsorption desorption [kg/m^2]
56real, dimension(ngrid),                          intent(out) :: deltam_h2o_regolith_phys ! mass of h2o that is exchanged due to adsorption desorption [kg/m^2]
57real, dimension(ngrid,nslope),                   intent(out) :: h2o_ice                  ! h2o ice amount [kg/m^2]
58real, dimension(ngrid,nslope),                   intent(out) :: co2_ice                  ! co2 ice amount [kg/m^2]
59type(layering), dimension(ngrid,nslope),         intent(inout) :: stratif             ! stratification (layerings)
60real, dimension(ngrid,nsoil_PEM,nslope),         intent(inout) :: TI_PEM              ! soil (mid-layer) thermal inertia in the PEM grid [SI]
61real, dimension(ngrid,nsoil_PEM,nslope),         intent(inout) :: tsoil_PEM           ! soil (mid-layer) temperature [K]
62real, dimension(ngrid,nslope),                   intent(inout) :: ice_table           ! Ice table depth [m]
63real, dimension(ngrid,nslope),                   intent(inout) :: ice_table_thickness ! Ice table thickness [m]
64real, dimension(ngrid,nsoil_PEM,nslope,timelen), intent(inout) :: tsoil_inst          ! instantaneous soil (mid-layer) temperature [K]
65real, dimension(ngrid,nsoil_PEM,nslope),         intent(inout) :: m_co2_regolith_phys ! mass of co2 adsorbed [kg/m^2]
66real, dimension(ngrid,nsoil_PEM,nslope),         intent(inout) :: m_h2o_regolith_phys ! mass of h2o adsorbed [kg/m^2]
67real, dimension(ngrid,nsoil_PEM,nslope),         intent(inout) :: watersoil_avg       ! surface water ice density, yearly averaged (kg/m^3)
68! local
69real, dimension(ngrid,nsoil_PEM,nslope) :: tsoil_startPEM                  ! soil temperature saved in the start [K]
70real, dimension(ngrid,nsoil_PEM,nslope) :: TI_startPEM                     ! soil thermal inertia saved in the start [SI]
71logical                                 :: found, found2                   ! check if variables are found in the start
72integer                                 :: iloop, ig, islope, it, isoil, k ! index for loops
73real                                    :: kcond                           ! Thermal conductivity, intermediate variable [SI]
74real                                    :: delta                           ! Depth of the interface regolith-breccia, breccia -bedrock [m]
75character(2)                            :: num                             ! intermediate string to read PEM start sloped variables
76real, dimension(ngrid,nsoil_PEM,nslope) :: tsoil_tmp_yr1                   ! intermediate soil temperature during yr 1 [K]
77real, dimension(ngrid,nsoil_PEM,nslope) :: tsoil_tmp_yr2                   ! intermediate soil temperature during yr 2 [K]
78logical                                 :: startpem_file                   ! boolean to check if we read the startfile or not
79real, dimension(:,:,:,:), allocatable   :: stratif_array                   ! Array for stratification (layerings)
80
81#ifdef CPP_STD
82    logical, dimension(ngrid) :: watercaptag
83    watercaptag = .false.
84#endif
85
86!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
87!!!
88!!! Purpose: read start_pem. Need a specific iostart_PEM
89!!!
90!!! Order: 0. Previous year of the PEM run
91!!!           Ice initialization
92!!!        1. Thermal Inertia
93!!!        2. Soil Temperature
94!!!        3. Ice table
95!!!        4. Mass of CO2 & H2O adsorbed
96!!!
97!!! /!\ This order must be respected !
98!!! Author: LL
99!!!
100!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
101
102!0.1 Check if the start_PEM exist.
103
104inquire(file = filename,exist = startpem_file)
105
106write(*,*)'Is start PEM?',startpem_file
107
108!0.2 Set to default values
109ice_table = -1.  ! by default, no ice table
110ice_table_thickness = -1.
111!1. Run
112if (startpem_file) then
113    write(*,*)'There is a "startpem.nc"!'
114    ! open pem initial state file:
115    call open_startphy(filename)
116
117!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
118    ! Stratification (layerings)
119    nb_str_max = 3
120    if (layering_algo) then
121        found = inquire_dimension("nb_str_max")
122        if (.not. found) then
123            write(*,*) 'Pemetat0: failed loading <nb_str_max>!'
124            write(*,*) '''nb_str_max'' is set to 3!'
125        else
126            nb_str_max = int(inquire_dimension_length('nb_str_max'))
127        endif
128        allocate(stratif_array(ngrid,nslope,nb_str_max,6))
129        stratif_array = 0.
130        do islope = 1,nslope
131            write(num,'(i2.2)') islope
132            call get_field('stratif_slope'//num//'_thickness',stratif_array(:,islope,:,1),found)
133            call get_field('stratif_slope'//num//'_top_elevation',stratif_array(:,islope,:,2),found2)
134            found = found .or. found2
135            call get_field('stratif_slope'//num//'_co2ice_volfrac',stratif_array(:,islope,:,3),found2)
136            found = found .or. found2
137            call get_field('stratif_slope'//num//'_h2oice_volfrac',stratif_array(:,islope,:,4),found2)
138            found = found .or. found2
139            call get_field('stratif_slope'//num//'_dust_volfrac',stratif_array(:,islope,:,5),found2)
140            found = found .or. found2
141            call get_field('stratif_slope'//num//'_air_volfrac',stratif_array(:,islope,:,6),found2)
142            found = found .or. found2
143            if (.not. found) then
144                write(*,*) 'Pemetat0: failed loading at least one of the properties of <stratif_slope'//num//'>'
145            endif ! not found
146        enddo ! islope
147        call array2stratif(stratif_array,ngrid,nslope,stratif)
148        deallocate(stratif_array)
149    endif
150
151!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
152#ifndef CPP_STD
153    ! h2o ice
154    h2o_ice = 0.
155    call get_field("h2o_ice",h2o_ice,found)
156    if (.not. found) then
157        write(*,*)'Pemetat0: failed loading <h2o_ice>'
158        write(*,*)'will reconstruct the values from watercaptag'
159        write(*,*)'with default value ''ini_huge_h2oice'''
160        do ig = 1,ngrid
161            if (watercaptag(ig)) h2o_ice(ig,:) = ini_huge_h2oice
162        enddo
163    else
164        ! The variations of infinite reservoirs during the PCM years are taken into account
165        h2o_ice = h2o_ice + watercap
166    endif
167
168    ! co2 ice
169    co2_ice = perennial_co2ice
170#endif
171
172    if (soil_pem) then
173
174!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
175!1. Thermal Inertia
176! a. General case
177        do islope = 1,nslope
178            write(num,'(i2.2)') islope
179            call get_field("TI_PEM_slope"//num,TI_startPEM(:,:,islope),found)
180            if (.not. found) then
181                write(*,*)'PEM settings: failed loading < TI_PEM_slope'//num//'>'
182                write(*,*)'will reconstruct the values of TI_PEM'
183
184                do ig = 1,ngrid
185                    if (TI_PEM(ig,index_breccia,islope) < TI_breccia) then
186                        !!! transition
187                        delta = depth_breccia
188                        TI_PEM(ig,index_breccia+1,islope) = sqrt((layer_PEM(index_breccia + 1) - layer_PEM(index_breccia))/ &
189                                                                 (((delta - layer_PEM(index_breccia))/(TI_PEM(ig,index_breccia,islope)**2)) + &
190                                                                 ((layer_PEM(index_breccia + 1) - delta)/(TI_breccia**2))))
191                        do iloop=index_breccia+2,index_bedrock
192                            TI_PEM(ig,iloop,islope) = TI_breccia
193                        enddo
194                    else ! we keep the high TI values
195                        do iloop = index_breccia + 1,index_bedrock
196                            TI_PEM(ig,iloop,islope) = TI_PEM(ig,index_breccia,islope)
197                        enddo
198                    endif ! TI PEM and breccia comparison
199                    !! transition
200                    delta = depth_bedrock
201                    TI_PEM(ig,index_bedrock + 1,islope) = sqrt((layer_PEM(index_bedrock + 1) - layer_PEM(index_bedrock))/ &
202                                                               (((delta - layer_PEM(index_bedrock))/(TI_PEM(ig,index_bedrock,islope)**2)) + &
203                                                               ((layer_PEM(index_bedrock + 1) - delta)/(TI_bedrock**2))))
204                    do iloop = index_bedrock + 2,nsoil_PEM
205                        TI_PEM(ig,iloop,islope) = TI_bedrock
206                    enddo
207                enddo
208            else ! found
209                do iloop = nsoil_PCM + 1,nsoil_PEM
210                    TI_PEM(:,iloop,islope) = TI_startPEM(:,iloop,islope)  ! ! 1st layers can change because of the presence of ice at the surface, so we don't change it here.
211                enddo
212            endif ! not found
213        enddo ! islope
214
215        write(*,*) 'PEMETAT0: THERMAL INERTIA done'
216
217! b. Special case for inertiedat, inertiedat_PEM
218        call get_field("inertiedat_PEM",inertiedat_PEM,found)
219        if (.not.found) then
220            do iloop = 1,nsoil_PCM
221                inertiedat_PEM(:,iloop) = inertiedat(:,iloop)
222            enddo
223        !!! zone de transition
224            delta = depth_breccia
225            do ig = 1,ngrid
226                if (inertiedat_PEM(ig,index_breccia).lt.TI_breccia) then
227                    inertiedat_PEM(ig,index_breccia+1) = sqrt((layer_PEM(index_breccia+1)-layer_PEM(index_breccia))/ &
228                                                              (((delta-layer_PEM(index_breccia))/(inertiedat(ig,index_breccia)**2))+ &
229                                                              ((layer_PEM(index_breccia+1)-delta)/(TI_breccia**2))))
230
231                    do iloop = index_breccia+2,index_bedrock
232                        inertiedat_PEM(ig,iloop) = TI_breccia
233                    enddo
234                else
235                    do iloop=index_breccia+1,index_bedrock
236                        inertiedat_PEM(ig,iloop) = inertiedat_PEM(ig,nsoil_PCM)
237                    enddo
238                endif ! comparison ti breccia
239            enddo ! ig
240
241            !!! zone de transition
242            delta = depth_bedrock
243            do ig = 1,ngrid
244                inertiedat_PEM(ig,index_bedrock+1) = sqrt((layer_PEM(index_bedrock+1)-layer_PEM(index_bedrock))/ &
245                                                          (((delta-layer_PEM(index_bedrock))/(inertiedat_PEM(ig,index_bedrock)**2))+ &
246                                                          ((layer_PEM(index_bedrock+1)-delta)/(TI_bedrock**2))))
247            enddo
248
249            do iloop = index_bedrock + 2, nsoil_PEM
250                do ig = 1,ngrid
251                    inertiedat_PEM(ig,iloop) = TI_bedrock
252                enddo
253            enddo
254        endif ! not found
255
256!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
257!2. Soil Temperature
258        do islope=1,nslope
259            write(num,fmt='(i2.2)') islope
260            call get_field("tsoil_PEM_slope"//num,tsoil_startPEM(:,:,islope),found)
261            if (.not.found) then
262                write(*,*)'PEM settings: failed loading <tsoil_PEM_slope'//num//'>'
263                write(*,*)'will reconstruct the values of Tsoil'
264!                do ig = 1,ngrid
265!                    kcond = (TI_PEM(ig,index_breccia+1,islope)*TI_PEM(ig,index_breccia+1,islope))/volcapa
266!                    tsoil_PEM(ig,index_breccia+1,islope) = tsoil_PEM(ig,index_breccia,islope) + fluxgeo/kcond*(mlayer_PEM(index_breccia)-mlayer_PEM(index_breccia-1))
267!                    do iloop=index_breccia+2,index_bedrock
268!                        kcond = (TI_PEM(ig,iloop,islope)*TI_PEM(ig,iloop,islope))/volcapa
269!                        tsoil_PEM(ig,iloop,islope) = tsoil_PEM(ig,index_breccia+1,islope) + fluxgeo/kcond*(mlayer_PEM(iloop-1)-mlayer_PEM(index_breccia))
270!                    enddo
271!                    kcond = (TI_PEM(ig,index_bedrock+1,islope)*TI_PEM(ig,index_bedrock+1,islope))/volcapa
272!                    tsoil_PEM(ig,index_bedrock+1,islope) = tsoil_PEM(ig,index_bedrock,islope) + fluxgeo/kcond*(mlayer_PEM(index_bedrock)-mlayer_PEM(index_bedrock-1))
273!
274!                    do iloop=index_bedrock+2,nsoil_PEM
275!                        kcond = (TI_PEM(ig,iloop,islope)*TI_PEM(ig,iloop,islope))/volcapa
276!                        tsoil_PEM(ig,iloop,islope) = tsoil_PEM(ig,index_bedrock+1,islope) + fluxgeo/kcond*(mlayer_PEM(iloop-1)-mlayer_PEM(index_bedrock))
277!                    enddo
278!                enddo
279                call ini_tsoil_pem(ngrid,nsoil_PEM,TI_PEM(:,:,islope),tsurf_avg_yr2(:,islope),tsoil_PEM(:,:,islope))
280                call compute_tsoil_pem(ngrid,nsoil_PEM,.true.,TI_PEM(:,:,islope),timestep,tsurf_avg_yr2(:,islope),tsoil_PEM(:,:,islope))
281            else
282! predictor corrector: restart from year 1 of the PCM and build the evolution of
283! tsoil at depth
284                tsoil_tmp_yr1(:,:,islope) = tsoil_startPEM(:,:,islope)
285                call compute_tsoil_pem(ngrid,nsoil_PEM,.true.,TI_PEM(:,:,islope),timestep,tsurf_avg_yr1(:,islope),tsoil_tmp_yr1(:,:,islope))
286                call compute_tsoil_pem(ngrid,nsoil_PEM,.false.,TI_PEM(:,:,islope),timestep,tsurf_avg_yr1(:,islope),tsoil_tmp_yr1(:,:,islope))
287                tsoil_tmp_yr2(:,:,islope) = tsoil_tmp_yr1(:,:,islope)
288                call compute_tsoil_pem(ngrid,nsoil_PEM,.false.,TI_PEM(:,:,islope),timestep,tsurf_avg_yr2(:,islope),tsoil_tmp_yr2(:,:,islope))
289
290                do iloop = nsoil_PCM+1,nsoil_PEM
291                    tsoil_PEM(:,iloop,islope) = tsoil_tmp_yr2(:,iloop,islope)
292                enddo
293            endif !found
294
295            do it = 1,timelen
296                do isoil = nsoil_PCM+1,nsoil_PEM
297                    tsoil_inst(:,isoil,islope,it) = tsoil_PEM(:,isoil,islope)
298                enddo
299            enddo
300            do isoil = nsoil_PCM+1,nsoil_PEM
301                do ig = 1,ngrid
302                    watersoil_avg(ig,isoil,islope) = exp(beta_clap_h2o/tsoil_PEM(ig,isoil,islope) + alpha_clap_h2o)/tsoil_PEM(ig,isoil,islope)*mmol(igcm_h2o_vap)/(mugaz*r)
303                enddo
304            enddo
305        enddo ! islope
306        write(*,*) 'PEMETAT0: SOIL TEMP done'
307
308!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
309!3. Ice Table
310        if(icetable_equilibrium) then
311            call get_field("ice_table",ice_table,found)
312            if (.not. found) then
313                write(*,*)'PEM settings: failed loading <ice_table>'
314                write(*,*)'will reconstruct the values of the ice table given the current state'
315                call computeice_table_equilibrium(ngrid,nslope,nsoil_PEM,watercaptag,watersurf_avg,watersoil_avg, TI_PEM(:,1,:),ice_table,ice_table_thickness)
316                call update_soil_thermalproperties(ngrid,nslope,nsoil_PEM,tend_h2o_ice,h2o_ice,global_avg_pressure,ice_table,ice_table_thickness,TI_PEM)
317                do islope = 1,nslope
318                    call ini_tsoil_pem(ngrid,nsoil_PEM,TI_PEM(:,:,islope),tsurf_avg_yr2(:,islope),tsoil_PEM(:,:,islope))
319                enddo
320            endif
321            write(*,*) 'PEMETAT0: ICE TABLE done'
322        endif
323
324!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
325!4. CO2 & H2O Adsorption
326        if (adsorption_pem) then
327            do islope = 1,nslope
328                write(num,fmt='(i2.2)') islope
329                call get_field("mco2_reg_ads_slope"//num,m_co2_regolith_phys(:,:,islope),found)
330                if (.not. found) then
331                    m_co2_regolith_phys = 0.
332                    exit
333                endif
334            enddo
335            do islope=1,nslope
336                write(num,fmt='(i2.2)') islope
337                call get_field("mh2o_reg_ads_slope"//num,m_h2o_regolith_phys(:,:,islope),found2)
338                if (.not. found2) then
339                    m_h2o_regolith_phys = 0.
340                    exit
341                endif
342            enddo
343
344            call regolith_adsorption(ngrid,nslope,nsoil_PEM,timelen,tend_h2o_ice,tend_co2_ice,h2o_ice,co2_ice,tsoil_PEM,TI_PEM,ps_inst,q_co2,q_h2o, &
345                                        m_h2o_regolith_phys,deltam_h2o_regolith_phys, m_co2_regolith_phys,deltam_co2_regolith_phys)
346
347            if (.not. found) deltam_co2_regolith_phys = 0.
348            if (.not.found2) deltam_h2o_regolith_phys = 0.
349
350            write(*,*) 'PEMETAT0: CO2 & H2O adsorption done'
351        endif ! adsorption_pem
352    endif ! soil_pem
353
354    call close_startphy
355
356else !No startfi, let's build all by hand
357
358    write(*,*)'There is no "startpem.nc"!'
359
360    ! Stratification (layerings)
361    nb_str_max = 3
362    if (layering_algo) write(*,*)'So the stratification (layerings) is initialized with only the 3 sub-surface strata.'
363
364    ! h2o ice
365    h2o_ice = 0.
366    write(*,*)'So ''h2o_ice'' is initialized with default value ''ini_huge_h2oice'' where ''watercaptag'' is true.'
367    do ig = 1,ngrid
368        if (watercaptag(ig)) h2o_ice(ig,:) = ini_huge_h2oice
369    enddo
370
371    ! co2 ice
372    write(*,*)'So ''co2_ice'' is initialized with ''perennial_co2ice''.'
373    co2_ice = perennial_co2ice
374
375    if (soil_pem) then
376
377!a) Thermal inertia
378        do islope = 1,nslope
379            do ig = 1,ngrid
380                if (TI_PEM(ig,index_breccia,islope) < TI_breccia) then
381                    !!! transition
382                    delta = depth_breccia
383                    TI_PEM(ig,index_breccia + 1,islope) = sqrt((layer_PEM(index_breccia+1)-layer_PEM(index_breccia))/ &
384                                                               (((delta-layer_PEM(index_breccia))/(TI_PEM(ig,index_breccia,islope)**2))+ &
385                                                               ((layer_PEM(index_breccia+1)-delta)/(TI_breccia**2))))
386                    do iloop=index_breccia + 2,index_bedrock
387                        TI_PEM(ig,iloop,islope) = TI_breccia
388                    enddo
389                else ! we keep the high ti values
390                    do iloop=index_breccia + 1,index_bedrock
391                        TI_PEM(ig,iloop,islope) = TI_PEM(ig,index_breccia,islope)
392                    enddo
393                endif
394                !! transition
395                delta = depth_bedrock
396                TI_PEM(ig,index_bedrock + 1,islope) = sqrt((layer_PEM(index_bedrock+1)-layer_PEM(index_bedrock))/ &
397                                                           (((delta-layer_PEM(index_bedrock))/(TI_PEM(ig,index_bedrock,islope)**2))+ &
398                                                           ((layer_PEM(index_bedrock+1)-delta)/(TI_breccia**2))))
399                do iloop = index_bedrock + 2,nsoil_PEM
400                    TI_PEM(ig,iloop,islope) = TI_bedrock
401                enddo
402            enddo
403        enddo
404
405        do iloop = 1,nsoil_PCM
406            inertiedat_PEM(:,iloop) = inertiedat(:,iloop)
407        enddo
408        !!! zone de transition
409        delta = depth_breccia
410        do ig = 1,ngrid
411            if (inertiedat_PEM(ig,index_breccia) < TI_breccia) then
412                inertiedat_PEM(ig,index_breccia + 1) = sqrt((layer_PEM(index_breccia + 1) - layer_PEM(index_breccia))/                &
413                                                            (((delta - layer_PEM(index_breccia))/(inertiedat(ig,index_breccia)**2)) + &
414                                                            ((layer_PEM(index_breccia + 1)-delta)/(TI_breccia**2))))
415                do iloop = index_breccia + 2,index_bedrock
416                    inertiedat_PEM(ig,iloop) = TI_breccia
417                enddo
418            else
419                do iloop = index_breccia + 1,index_bedrock
420                    inertiedat_PEM(ig,iloop) = inertiedat_PEM(ig,index_breccia)
421                enddo
422            endif
423        enddo
424
425        !!! zone de transition
426        delta = depth_bedrock
427        do ig = 1,ngrid
428            inertiedat_PEM(ig,index_bedrock + 1) = sqrt((layer_PEM(index_bedrock + 1) - layer_PEM(index_bedrock))/                    &
429                                                        (((delta - layer_PEM(index_bedrock))/(inertiedat_PEM(ig,index_bedrock)**2)) + &
430                                                        ((layer_PEM(index_bedrock + 1) - delta)/(TI_bedrock**2))))
431        enddo
432
433        do iloop = index_bedrock + 2,nsoil_PEM
434            do ig = 1,ngrid
435                inertiedat_PEM(ig,iloop) = TI_bedrock
436            enddo
437        enddo
438
439        write(*,*) 'PEMETAT0: TI done'
440
441!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
442!b) Soil temperature
443        do islope = 1,nslope
444!            do ig = 1,ngrid
445!                kcond = (TI_PEM(ig,index_breccia+1,islope)*TI_PEM(ig,index_breccia+1,islope))/volcapa
446!                tsoil_PEM(ig,index_breccia+1,islope) = tsoil_PEM(ig,index_breccia,islope) + fluxgeo/kcond*(mlayer_PEM(index_breccia)-mlayer_PEM(index_breccia-1))
447!
448!                do iloop=index_breccia+2,index_bedrock
449!                    kcond = (TI_PEM(ig,iloop,islope)*TI_PEM(ig,iloop,islope))/volcapa
450!                    tsoil_PEM(ig,iloop,islope) = tsoil_PEM(ig,index_breccia+1,islope) + fluxgeo/kcond*(mlayer_PEM(iloop-1)-mlayer_PEM(index_breccia))
451!                enddo
452!                kcond = (TI_PEM(ig,index_bedrock+1,islope)*TI_PEM(ig,index_bedrock+1,islope))/volcapa
453!                tsoil_PEM(ig,index_bedrock+1,islope) = tsoil_PEM(ig,index_bedrock,islope) + fluxgeo/kcond*(mlayer_PEM(index_bedrock)-mlayer_PEM(index_bedrock-1))
454!
455!                do iloop=index_bedrock+2,nsoil_PEM
456!                    kcond = (TI_PEM(ig,iloop,islope)*TI_PEM(ig,iloop,islope))/volcapa
457!                    tsoil_PEM(ig,iloop,islope) = tsoil_PEM(ig,index_bedrock+1,islope) + fluxgeo/kcond*(mlayer_PEM(iloop-1)-mlayer_PEM(index_bedrock))
458!                enddo
459!            enddo
460            call ini_tsoil_pem(ngrid,nsoil_PEM,TI_PEM(:,:,islope),tsurf_avg_yr2(:,islope),tsoil_PEM(:,:,islope))
461            call compute_tsoil_pem(ngrid,nsoil_PEM,.true.,TI_PEM(:,:,islope),timestep,tsurf_avg_yr2(:,islope),tsoil_PEM(:,:,islope))
462
463! First raw initialization
464            do it = 1,timelen
465                do isoil = nsoil_PCM + 1,nsoil_PEM
466                    tsoil_inst(:,isoil,islope,it) = tsoil_PEM(:,isoil,islope)
467                enddo
468            enddo
469
470            do it = 1,timelen
471                do isoil = nsoil_PCM + 1,nsoil_PEM
472                    call ini_tsoil_pem(ngrid,nsoil_PEM,TI_PEM(:,:,islope),tsurf_avg_yr2(:,islope),tsoil_inst(:,:,islope,it))
473                enddo
474            enddo
475
476            do isoil = nsoil_PCM + 1,nsoil_PEM
477                do ig = 1,ngrid
478                    watersoil_avg(ig,isoil,islope) = exp(beta_clap_h2o/tsoil_PEM(ig,isoil,islope) + alpha_clap_h2o)/tsoil_PEM(ig,isoil,islope)*mmol(igcm_h2o_vap)/(mugaz*r)
479                enddo
480            enddo
481        enddo !islope
482        write(*,*) 'PEMETAT0: TSOIL done'
483
484!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
485!c) Ice table
486        if(icetable_equilibrium) then
487            call computeice_table_equilibrium(ngrid,nslope,nsoil_PEM,watercaptag,watersurf_avg,watersoil_avg,TI_PEM(:,1,:),ice_table,ice_table_thickness)
488            call update_soil_thermalproperties(ngrid,nslope,nsoil_PEM,tend_h2o_ice,h2o_ice,global_avg_pressure,ice_table,ice_table_thickness,TI_PEM)
489            do islope = 1,nslope
490                call ini_tsoil_pem(ngrid,nsoil_PEM,TI_PEM(:,:,islope),tsurf_avg_yr2(:,islope),tsoil_PEM(:,:,islope))
491            enddo
492            write(*,*) 'PEMETAT0: Ice table done'
493        endif
494       
495!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
496!d) Regolith adsorbed
497        if (adsorption_pem) then
498            m_co2_regolith_phys = 0.
499            m_h2o_regolith_phys = 0.
500            call regolith_adsorption(ngrid,nslope,nsoil_PEM,timelen,tend_h2o_ice,tend_co2_ice,h2o_ice,co2_ice,tsoil_PEM,TI_PEM,ps_inst,q_co2,q_h2o, &
501                                     m_h2o_regolith_phys,deltam_h2o_regolith_phys, m_co2_regolith_phys,deltam_co2_regolith_phys)
502            deltam_co2_regolith_phys = 0.
503            deltam_h2o_regolith_phys = 0.
504        endif
505
506        write(*,*) 'PEMETAT0: CO2 adsorption done'
507    endif !soil_pem
508endif ! of if (startphy_file)
509
510if (soil_pem) then ! Sanity check
511    do ig = 1,ngrid
512        do islope = 1,nslope
513            do iloop = 1,nsoil_PEM
514                if (isnan(tsoil_PEM(ig,iloop,islope))) call abort_pem("PEM - pemetat0","NaN detected in Tsoil",1)
515            enddo
516        enddo
517    enddo
518endif !soil_pem
519
520END SUBROUTINE pemetat0
521
522END MODULE pemetat0_mod
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