wiki:WikiCompilation

Version 6 (modified by lfita, 10 years ago) (diff)

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Compilation instructions

  1. Extraction of the source code:
    $ svn co http://svn.lmd.jussieu.fr/LMDZ_WRF LMDZ_WRF
    
  1. Copy (not int the repository folder...) folder WRFV3 to the desired spatial resolution (F77 legacy). As example one for 80x90x39
    $ cp -R WRFV3 ${WORKDIR}/WRFV3_80x90x39
    
  1. Go to the ${WORKDIR} and compile there
    $ cd ${WORKDIR}/WRFV3_80x90x39
    
  1. Define domain size for LMDZ editing file lmdz/dimensions.h (see documentation for more details)
    $ cat lmdz/dimensions.h
       INTEGER iim,jjm,llm,ndm,wiim,wjjm,wbdym
    
       PARAMETER (iim= 1, jjm=7031, llm=38,ndm=1,wiim=79,wjjm=89,wbdym=5)
    

jjm = (dimx-1) * (dimy -1)
llm = (dimz - 1)
wiim = dimx - 1
wjjm = dimy - 1
wbdym = 5 (up to now, mandatory to run WRF with 5 grid points in the sponge zone)

  1. run script tools/prepare_compilation.bash ('-h', for help. copy netCDF libraries and other staff not automatized)
    $ ./prepare_compilation.bash [WRF_LMDZsrc] [NETCDFhome] ${WORKDIR}/WRFV3_80x90x39
    
  1. prepare compilation (ready for 'lmd' machines in serial) if not, edit
    1. $ ./configure
    2. add pre-compiler flag -DLMDZ after -DNETCDF (inside configure.wrf)
    3. modify lmdz/Makefile with that values from the configure.wrf
  1. prepare compilation modifying Registry files (already done, have a look just in case):
    1. $ ls -lrta Registry/Registry.EM
      Registry/Registry.EM -> Registry.EM.LMDZ
      
    2. $ ls -lrta Registry/registry.dimspec
      Registry/registry.dimspec -> registry.dimspec.lmdz
      
  1. Compile as usual
    $ compile em_real >& compile.log
    
  1. Compile manually a lmdz subroutine (not working, not knowing why). Example with gfortran serial in lmdz machines
      $ cd lmdz
      $ gfortran -O3 -ftree-vectorize -ftree-loop-linear -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4   -fconvert=big-endian -frecord-marker=4 -O3 -ftree-vectorize -ftree-loop-linear -funroll-loops  -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 -g -O0 -fbacktrace -Wall -fbounds-check -c -L/u/lflmd/bin/gcc_netcdf-4.3.0/lib  -lnetcdf -lnetcdff  -I/u/lflmd/bin/gcc_netcdf-4.3.0/include lmdz_wrf_variables_mod.f90
      $ cd ..
    
  1. run script for second time tools/prepare_compilation.bash
    $ ./prepare_compilation.bash [WRF_LMDZsrc] [NETCDFhome] ${WORKDIR}/WRFV3_80x90x39
    
  1. Recompile as usual
    $ compile em_real >& compile.log
    
  1. Checking compilation (empty outputs)
    • $ cat -n compile.log | grep Error
    • $ cat -n compile.log | grep Erreur (just in case you are in a French speaking computer)
  1. Running simulation
    1. Run all the steps WPS and real.exe as usual
    2. folder WRFV3/run is not completed (no binaries in repository!), thus get a copy of the right WRF version and use the original source
    3. Edit and modify namelist.input and all the LMDZ *def files provided in WRF/run folder: config.def, gcm.def, physiq.def, run.def, traceur.def
  1. You're done, Have fun!

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