Changeset 1216 in lmdz_wrf for trunk


Ignore:
Timestamp:
Oct 20, 2016, 11:44:56 AM (8 years ago)
Author:
lfita
Message:

Removing spurious <TITLE>
Adding NO WARRANTY on the license

Location:
trunk/tools/documentation
Files:
9 edited

Legend:

Unmodified
Added
Removed

  • trunk/tools/documentation/PyNCplot.css

    r1210 r1216  
    2626div.valins{width:100%;height:10%;text-align:left;position:absolute;bottom:10%;left:0%;background-color:rgb(192,192,192);
    2727  font-size:0.9em;font-family:"monospace";overflow-x:auto}
     28
     29div.license{width:100%;height:2%;text-align:right;position:absolute;bottom:0%;left:0%;
     30  color:rgb(240,240,240);font-size:0.7em;}
    2831
    2932/* Environments */

  • trunk/tools/documentation/index.html

    r1211 r1216  
    1414      <A CLASS="lc" HREF="nctransform/nctransform.html" TARGET="hmenu">Netcdf transformation</A> |
    1515      <A CLASS="lc" HREF="plotting/plotting.html" TARGET="hmenu">Plotting</A> |
    16       <A CLASS="lc" HREF="other.html" TARGET="hmenu">Other</A>
     16      <A CLASS="lc" HREF="other/other.html" TARGET="hmenu">Other</A>
    1717    </DIV>
    1818    <DIV CLASS="hvalmenu">
    1919      <IFRAME SRC="intro.html" NAME="hmenu" FRAMEBORDER=0 WIDTH="100%" HEIGHT="100%"></IFRAME>
    2020    </DIV>
     21    <DIV CLASS="license">
     22      pyNCplot comes with ABSOLUTELY NO WARRANTY. This work is licendes under a <A CLASS="la" HREF="http://creativecommons.org/licenses/by-sa/4.0" TARGET="_blank">Creative Commons Attribution-ShareAlike 4.0 International License</A> <IMG SRC="by-sa.png" HEIGHT="80%"></IMG>
     23    </DIV>
    2124    </DIV>
    2225  </BODY>

  • trunk/tools/documentation/intro.html

    r1214 r1216  
    2020      <LI>Manage of netCDF files (<A CLASS="la" HREF="nctransform/nctransform.html" TARGET="hmenu">netCDF transformation</A>)</LI>
    2121      <LI>Plot figures (<A CLASS="la" HREF="plotting/plotting.html" TARGET="hmenu">plotting</A>)</LI>
    22       <LI>Compute diagnostics (<!--A CLASS="la" HREF="other.html" TARGET="hmenu"-->other<!--/A-->)</LI>
    23       <LI>Perform files/figures for model inter-comparison (<!--A CLASS="la" HREF="other.html" TARGET="hmenu"-->other<!--/A-->)</LI>
    24       <LI>NetCDF creation from ASCII observation files (<!--A CLASS="la" HREF="other.html" TARGET="hmenu"-->other<!--/A-->)</LI>
     22      <LI>Compute diagnostics (<!--A CLASS="la" HREF="other/other.html" TARGET="hmenu"-->other<!--/A-->)</LI>
     23      <LI>NetCDF creation from ASCII observation files (<A CLASS="la" HREF="other/other.html" TARGET="hmenu">other</A>)</LI>
     24      <LI>Perform files/figures for model inter-comparison (<!--A CLASS="la" HREF="other/other.html" TARGET="hmenu"-->other<!--/A-->)</LI>
     25      <LI>Creation of multi-figure panels (<!--A CLASS="la" HREF="other/other.html" TARGET="hmenu"-->other<!--/A-->)</LI>
     26      <LI>netCDF transformation of Time-Series ASCII WRF output (<!--A CLASS="la" HREF="other/other.html" TARGET="hmenu"-->other<!--/A-->)</LI>
     27      <LI>Checking of WRF namelist using compiled version of code (<!--A CLASS="la" HREF="other/other.html" TARGET="hmenu"-->other<!--/A-->)</LI>
    2528    </UL>
    2629    All scripts are available from a repository hosted by <I>`Laboratoire de M&eacute;t&eacute;orologie Dynamique'</I> (<A CLASS="la" HREF="http://www.lmd.jussieu.fr/" TARGET="_blank">LMD</A>):

  • trunk/tools/documentation/nctransform/field_stats.html

    r1212 r1216  
    22  <HEAD>
    33    <META HTTP-EQUIV="Content-Type" CONTENT="text/html; CHARSET=utf-8">
    4     <TITLE>PyNCplot: plotting 2D shadow</TITLE>
    54    <LINK REL="stylesheet" TYPE="text/css" HREF="../PyNCplot.css"/>
    65  </HEAD>

  • trunk/tools/documentation/nctransform/intro.html

    r1212 r1216  
    3030      Available funtions:
    3131      <UL>
    32         <LI>addvals: Function to add values to a given variable at a given dimension</LI>
    33         <LI>CDO_toCF: Function to pass a CDO output file to CF-conventions</LI>
    34         <LI>chdimname: Changing the name of the dimension</LI>
    35         <LI>changevartype: Function to change the type of a variable (when possible)</LI>
    36         <LI>checkallvars: Function to check all variables of a file</LI>
    37         <LI>checkAllValues: Function to check for variables with along all their dimensions with the same value in a file</LI>
    38         <LI>checkNaNs: Function to check for NaN values over all variables in a file</LI>
    39         <LI>chgtimestep: Function to change the values of a given time-step of a variable inside a netCDF for values from a nother file</LI>
    40         <LI>chvarname: Changing the name of the variable</LI>
    41         <LI>cleaning_varsfile: Function to keep a list of varibales from a file</LI>
    42         <LI>compute_deaccum: Function to compute deaccum: deaccumulation of a variable (VAR[t+1]-VAR[t])</LI>
    43         <LI>compute_opersvarsfiles: Function to compute opersvarfiles: operation of variables from different files</LI>
    44         <LI>compute_opervaralltime: Function to compute opervaralltime: operation of variable successible allover the time-steps</LI>
    45         <LI>compute_opervartimes: Function to compute opervartimes: operation of variable for a given sub-set of time-steps</LI>
    46         <LI>compute_tevolboxtraj: Function to compute tevolboxtraj: temporal evolution at a given point along a box following a trajectory</LI>
    47         <LI>computevar_model: Function to provide the way to compute a CF-variable providing its name</LI>
    48         <LI>DatesFiles: Function to find different time values on a series of WRF files in a folder</LI>
    49         <LI>DataSetSection: Function to get a section (values along a dimension) of a given data-set</LI>
    50         <LI>DataSetSection_multidims: Function to get a section (values along multiple dimensions) of a given data-set</LI>
    51         <LI>DataSetSection_multivars: Function to get a section (values along multiple variables) of a given data-set</LI>
    52         <LI>dimToUnlimited: Operation to create an unlimited dimension from an existing one</LI>
    53         <LI>dimVar_creation: Function to add a 1D variable with the size of a given dimension in a file</LI>
    54         <LI>fattradd: Adding attributes from a reference file</LI>
    55         <LI>fdimadd: Adding dimension from another reference file </LI>
    56         <LI>fgaddattr: Adding global attributes from a reference file</LI>
    57         <LI>field_stats: Function to retrieve statistics from a field</LI>
    58         <LI>field_stats_dim: Function to retrieve statistics from a field along dimensions</LI>
    59         <LI>file_creation: Operation to create a file with one variable with a given set of dimensions</LI>
    60         <LI>file_oper_alongdims: Function to operate a file along different dimensions of a variable</LI>
    61         <LI>filter_2dim: Function to filter along 2 dimensions (moving grid-box means of a given size) values of the netCDF file</LI>
    62         <LI>flipdim: flips the value following one dimension</LI>
    63         <LI>fvaradd: Adding variable (and all its attributes and dimensions) from a reference file to a file</LI>
    64         <LI>gaddattrk: Add a global attribute to a netCDF caring about the type. Removes previous attribute if it exist</LI>
    65         <LI>gaddattr: Add a global attribute to a netCDF. Removes previous attribute if it exist</LI>
    66         <LI>get_attribute: Function to get an attribute from a netCDF file</LI>
    67         <LI>get_namelist_vars: Function to get namelist-like  values ([varname] = [value]) </LI>
    68         <LI>get_Variables: Function to get a list of variables from an existing file</LI>
    69         <LI>getvalues_lonlat: Function to retrieve the values from the closest grid point to a set of longitude, latitude values</LI>
    70         <LI>grattr: Function to read a global atribute</LI>
    71         <LI>grmattr: Removing a global attribute</LI>
    72         <LI>idims: Give all the dimensions names of a file</LI>
    73         <LI>igattrs: Give all the global attributes of a file</LI>
    74         <LI>increaseDimvar: Function to increase with 1 dimension an existing variable within a netcdf file. Values of the variable will be repeated along the new dimension</LI>
    75         <LI>isgattrs: Give a single global attribute of a file and its type</LI>
    76         <LI>isvattrs: Give a single attribute of a variable</LI>
    77         <LI>ivars: Give all the variable names of a file</LI>
    78         <LI>ivattrs: Give all the attributes of a variable and its type</LI>
    79         <LI>LMDZ_toCF: Function to pass a LMDZ original file to CF-conventions</LI>
    80         <LI>maskvar: Function to mask a variable using a mask. It is assumed that mask[...,dimM,dimJ,dimK] and </LI>
    81         <LI>model_characteristics: Function to provide major characterisitcs of a given model output</LI>
    82         <LI>ncreplace: Function to replace something from a netCDF file</LI>
    83         <LI>ncstepdiff: Function to compute differencies between time-steps (deacumulate) a netCDF file</LI>
    84         <LI>netcdf_concatenation: Function to concatenate netCDF files for a given set of variables</LI>
    85         <LI>netcdf_fold_concatenation: Function to concatenate netCDF files in a given folder for a given set of variables</LI>
    86         <LI>netcdf_fold_concatenation_HMT: Function to concatenate netCDF files in a given folder for a given set of variables giving Header, Middle, Tail for the name files</LI>
    87         <LI>reproject: Function to reproject values to another one</LI>
    88         <LI>Partialmap_Entiremap: Function to transform from a partial global map (e.g.: only land points) to an entire one Coincidence of points is done throughout a first guess from fractions of the total domain of search</LI>
    89         <LI>Partialmap_EntiremapFor: Function to transform from a partial global map (e.g.: only land points) to an entire one using Fortran code Coincidence of points is done throughout a first guess from fractions of the total domain of search</LI>
    90         <LI>Partialmap_EntiremapForExact: Function to transform from a partial global map (e.g.: only land points) to an entire one using Fortran code with exact location Coincidence of points is done throughout a first guess from fractions of the total domain of search</LI>
    91         <LI>pinterp: Function to vertically interpolate using subroutines from the p_interp.F90 NCAR program</LI>
    92         <LI>remapnn: Function to remap to the nearest neightbor a variable using projection from another file</LI>
    93         <LI>seasmean: Function to compute the seasonal mean of a variable</LI>
    94         <LI>sellonlatbox: Function to select a lotlan box from a data-set</LI>
    95         <LI>sellonlatlevbox: Function to select a lotlan box and a given level from a data-set</LI>
    96         <LI>selvar: Function to select a series of variables from a netcdf file. Variables with </LI>
    97         <LI>setvar_asciivalues: Function to set de values of a variable with an ASCII file (common </LI>
    98         <LI>sorttimesmat: Function to sort the time values of a given file</LI>
    99         <LI>spacemean: Function to retrieve a space mean series from a multidimensional variable of a file</LI>
    100         <LI>SpatialWeightedMean: Function to compute the spatial mean using weights from a netCDF file</LI>
    101         <LI>statcompare_files: Python script to statistically compare two different files</LI>
    102         <LI>subbasin: Function to retrieve the subbasin (all the sub-flows untila a given lon,lat)</LI>
    103         <LI>submns: Function to retrieve a series of months from a file</LI>
    104         <LI>subyrs: Function to retrieve a series of years from a file</LI>
    105         <LI>TimeInf: Function to print all the information from the variable time</LI>
    106         <LI>time_reset: Function to re-set the time axis of a file</LI>
    107         <LI>TimeSplitmat: Function to transform a file with CFtimes to a matrix [Nyear,Nmonth,Nday,Nhour,Nminute,Nsecond] </LI>
    108         <LI>timemean: Function to retrieve a time mean series from a multidimensional variable of a file</LI>
    109         <LI>valmod: Function to modify the value of a variable</LI>
    110         <LI>valmod_dim: Function to modify the value of a variable at a given dimension and value</LI>
    111         <LI>varaddattrk: Add an attribute to a variable caring about the type</LI>
    112         <LI>varaddattr: Add an attribute to a variable. Removes previous attribute if it exists</LI>
    113         <LI>varaddref: Function to add a variable in an existing file copying characteristics from an existing one</LI>
    114         <LI>var_creation: Operation to create a new variable in a file with a given set of dimensions</LI>
    115         <LI>varout: Function when we want to output variable values</LI>
    116         <LI>varrmattr: Removing an attribute from a variable</LI>
    117         <LI>varrm: Removing a variable from a file</LI>
    118         <LI>VarVal_FillValue: Function to transform a given value from a given variable to _FillValue in a netCDF file</LI>
    119         <LI>vrattr: Function to remove an atribute from a variable</LI>
    120         <LI>WRF_d0Nref: Function for the generation of an extra WRF domain from a given one </LI>
    121         <LI>WRF_CFlonlat_creation: Function to add a CF-convention longitude/latitude variables in a WRF file</LI>
    122         <LI>WRF_CFtime_creation: Function to add a CF-convention time unit in a WRF file</LI>
    123         <LI>WRF_CFxtime_creation: Function to add a CF-convention time unit in a WRF file using variable 'XTIME'</LI>
    124         <LI>WRF_toCF: Function to pass a WRF original file to CF-conventions</LI>
     32        <LI><SPAN CLASS="codetxt">addvals:</SPAN> Function to add values to a given variable at a given dimension</LI>
     33        <LI><SPAN CLASS="codetxt">CDO_toCF:</SPAN> Function to pass a CDO output file to CF-conventions</LI>
     34        <LI><SPAN CLASS="codetxt">chdimname:</SPAN> Changing the name of the dimension</LI>
     35        <LI><SPAN CLASS="codetxt">changevartype:</SPAN> Function to change the type of a variable (when possible)</LI>
     36        <LI><SPAN CLASS="codetxt">checkallvars:</SPAN> Function to check all variables of a file</LI>
     37        <LI><SPAN CLASS="codetxt">checkAllValues:</SPAN> Function to check for variables with along all their dimensions with the same value in a file</LI>
     38        <LI><SPAN CLASS="codetxt">checkNaNs:</SPAN> Function to check for NaN values over all variables in a file</LI>
     39        <LI><SPAN CLASS="codetxt">chgtimestep:</SPAN> Function to change the values of a given time-step of a variable inside a netCDF for values from a nother file</LI>
     40        <LI><SPAN CLASS="codetxt">chvarname:</SPAN> Changing the name of the variable</LI>
     41        <LI><SPAN CLASS="codetxt">cleaning_varsfile:</SPAN> Function to keep a list of varibales from a file</LI>
     42        <LI><SPAN CLASS="codetxt">DatesFiles:</SPAN> Function to find different time values on a series of WRF files in a folder</LI>
     43        <LI><SPAN CLASS="codetxt">DataSetSection:</SPAN> Function to get a section (values along a dimension) of a given data-set</LI>
     44        <LI><SPAN CLASS="codetxt">DataSetSection_multidims:</SPAN> Function to get a section (values along multiple dimensions) of a given data-set</LI>
     45        <LI><SPAN CLASS="codetxt">DataSetSection_multivars:</SPAN> Function to get a section (values along multiple variables) of a given data-set</LI>
     46        <LI><SPAN CLASS="codetxt">dimToUnlimited:</SPAN> Operation to create an unlimited dimension from an existing one</LI>
     47        <LI><SPAN CLASS="codetxt">dimVar_creation:</SPAN> Function to add a 1D variable with the size of a given dimension in a file</LI>
     48        <LI><SPAN CLASS="codetxt">fattradd:</SPAN> Adding attributes from a reference file</LI>
     49        <LI><SPAN CLASS="codetxt">fdimadd:</SPAN> Adding dimension from another reference file </LI>
     50        <LI><SPAN CLASS="codetxt">fgaddattr:</SPAN> Adding global attributes from a reference file</LI>
     51        <LI><SPAN CLASS="codetxt">field_stats:</SPAN> Function to retrieve statistics from a field</LI>
     52        <LI><SPAN CLASS="codetxt">field_stats_dim:</SPAN> Function to retrieve statistics from a field along dimensions</LI>
     53        <LI><SPAN CLASS="codetxt">file_creation:</SPAN> Operation to create a file with one variable with a given set of dimensions</LI>
     54        <LI><SPAN CLASS="codetxt">file_oper_alongdims:</SPAN> Function to operate a file along different dimensions of a variable</LI>
     55        <LI><SPAN CLASS="codetxt">filter_2dim:</SPAN> Function to filter along 2 dimensions (moving grid-box means of a given size) values of the netCDF file</LI>
     56        <LI><SPAN CLASS="codetxt">flipdim:</SPAN> flips the value following one dimension</LI>
     57        <LI><SPAN CLASS="codetxt">fvaradd:</SPAN> Adding variable (and all its attributes and dimensions) from a reference file to a file</LI>
     58        <LI><SPAN CLASS="codetxt">gaddattrk:</SPAN> Add a global attribute to a netCDF caring about the type. Removes previous attribute if it exist</LI>
     59        <LI><SPAN CLASS="codetxt">gaddattr:</SPAN> Add a global attribute to a netCDF. Removes previous attribute if it exist</LI>
     60        <LI><SPAN CLASS="codetxt">get_attribute:</SPAN> Function to get an attribute from a netCDF file</LI>
     61        <LI><SPAN CLASS="codetxt">get_namelist_vars:</SPAN> Function to get namelist-like  values ([varname] = [value]) </LI>
     62        <LI><SPAN CLASS="codetxt">get_Variables:</SPAN> Function to get a list of variables from an existing file</LI>
     63        <LI><SPAN CLASS="codetxt">getvalues_lonlat:</SPAN> Function to retrieve the values from the closest grid point to a set of longitude, latitude values</LI>
     64        <LI><SPAN CLASS="codetxt">grattr:</SPAN> Function to read a global atribute</LI>
     65        <LI><SPAN CLASS="codetxt">grmattr:</SPAN> Removing a global attribute</LI>
     66        <LI><SPAN CLASS="codetxt">idims:</SPAN> Give all the dimensions names of a file</LI>
     67        <LI><SPAN CLASS="codetxt">igattrs:</SPAN> Give all the global attributes of a file</LI>
     68        <LI><SPAN CLASS="codetxt">increaseDimvar:</SPAN> Function to increase with 1 dimension an existing variable within a netcdf file. Values of the variable will be repeated along the new dimension</LI>
     69        <LI><SPAN CLASS="codetxt">isgattrs:</SPAN> Give a single global attribute of a file and its type</LI>
     70        <LI><SPAN CLASS="codetxt">isvattrs:</SPAN> Give a single attribute of a variable</LI>
     71        <LI><SPAN CLASS="codetxt">ivars:</SPAN> Give all the variable names of a file</LI>
     72        <LI><SPAN CLASS="codetxt">ivattrs:</SPAN> Give all the attributes of a variable and its type</LI>
     73        <LI><SPAN CLASS="codetxt">LMDZ_toCF:</SPAN> Function to pass a LMDZ original file to CF-conventions</LI>
     74        <LI><SPAN CLASS="codetxt">maskvar:</SPAN> Function to mask a variable using a mask. It is assumed that mask[...,dimM,dimJ,dimK] and </LI>
     75        <LI><SPAN CLASS="codetxt">model_characteristics:</SPAN> Function to provide major characterisitcs of a given model output</LI>
     76        <LI><SPAN CLASS="codetxt">ncreplace:</SPAN> Function to replace something from a netCDF file</LI>
     77        <LI><SPAN CLASS="codetxt">ncstepdiff:</SPAN> Function to compute differencies between time-steps (deacumulate) a netCDF file</LI>
     78        <LI><SPAN CLASS="codetxt">netcdf_concatenation:</SPAN> Function to concatenate netCDF files for a given set of variables</LI>
     79        <LI><SPAN CLASS="codetxt">netcdf_fold_concatenation:</SPAN> Function to concatenate netCDF files in a given folder for a given set of variables</LI>
     80        <LI><SPAN CLASS="codetxt">netcdf_fold_concatenation_HMT:</SPAN> Function to concatenate netCDF files in a given folder for a given set of variables giving Header, Middle, Tail for the name files</LI>
     81        <LI><SPAN CLASS="codetxt">reproject:</SPAN> Function to reproject values to another one</LI>
     82        <LI><SPAN CLASS="codetxt">Partialmap_Entiremap:</SPAN> Function to transform from a partial global map (e.g.: only land points) to an entire one Coincidence of points is done throughout a first guess from fractions of the total domain of search</LI>
     83        <LI><SPAN CLASS="codetxt">Partialmap_EntiremapFor:</SPAN> Function to transform from a partial global map (e.g.: only land points) to an entire one using Fortran code Coincidence of points is done throughout a first guess from fractions of the total domain of search</LI>
     84        <LI><SPAN CLASS="codetxt">Partialmap_EntiremapForExact:</SPAN> Function to transform from a partial global map (e.g.: only land points) to an entire one using Fortran code with exact location Coincidence of points is done throughout a first guess from fractions of the total domain of search</LI>
     85        <LI><SPAN CLASS="codetxt">pinterp:</SPAN> Function to vertically interpolate using subroutines from the p_interp.F90 NCAR program</LI>
     86        <LI><SPAN CLASS="codetxt">remapnn:</SPAN> Function to remap to the nearest neightbor a variable using projection from another file</LI>
     87        <LI><SPAN CLASS="codetxt">seasmean:</SPAN> Function to compute the seasonal mean of a variable</LI>
     88        <LI><SPAN CLASS="codetxt">sellonlatbox:</SPAN> Function to select a lotlan box from a data-set</LI>
     89        <LI><SPAN CLASS="codetxt">sellonlatlevbox:</SPAN> Function to select a lotlan box and a given level from a data-set</LI>
     90        <LI><SPAN CLASS="codetxt">selvar:</SPAN> Function to select a series of variables from a netcdf file. Variables with </LI>
     91        <LI><SPAN CLASS="codetxt">setvar_asciivalues:</SPAN> Function to set de values of a variable with an ASCII file (common </LI>
     92        <LI><SPAN CLASS="codetxt">sorttimesmat:</SPAN> Function to sort the time values of a given file</LI>
     93        <LI><SPAN CLASS="codetxt">spacemean:</SPAN> Function to retrieve a space mean series from a multidimensional variable of a file</LI>
     94        <LI><SPAN CLASS="codetxt">SpatialWeightedMean:</SPAN> Function to compute the spatial mean using weights from a netCDF file</LI>
     95        <LI><SPAN CLASS="codetxt">statcompare_files:</SPAN> Python script to statistically compare two different files</LI>
     96        <LI><SPAN CLASS="codetxt">subbasin:</SPAN> Function to retrieve the subbasin (all the sub-flows untila a given lon,lat)</LI>
     97        <LI><SPAN CLASS="codetxt">submns:</SPAN> Function to retrieve a series of months from a file</LI>
     98        <LI><SPAN CLASS="codetxt">subyrs:</SPAN> Function to retrieve a series of years from a file</LI>
     99        <LI><SPAN CLASS="codetxt">TimeInf:</SPAN> Function to print all the information from the variable time</LI>
     100        <LI><SPAN CLASS="codetxt">time_reset:</SPAN> Function to re-set the time axis of a file</LI>
     101        <LI><SPAN CLASS="codetxt">TimeSplitmat:</SPAN> Function to transform a file with CFtimes to a matrix [Nyear,Nmonth,Nday,Nhour,Nminute,Nsecond] </LI>
     102        <LI><SPAN CLASS="codetxt">timemean:</SPAN> Function to retrieve a time mean series from a multidimensional variable of a file</LI>
     103        <LI><SPAN CLASS="codetxt">valmod:</SPAN> Function to modify the value of a variable</LI>
     104        <LI><SPAN CLASS="codetxt">valmod_dim:</SPAN> Function to modify the value of a variable at a given dimension and value</LI>
     105        <LI><SPAN CLASS="codetxt">varaddattrk:</SPAN> Add an attribute to a variable caring about the type</LI>
     106        <LI><SPAN CLASS="codetxt">varaddattr:</SPAN> Add an attribute to a variable. Removes previous attribute if it exists</LI>
     107        <LI><SPAN CLASS="codetxt">varaddref:</SPAN> Function to add a variable in an existing file copying characteristics from an existing one</LI>
     108        <LI><SPAN CLASS="codetxt">var_creation:</SPAN> Operation to create a new variable in a file with a given set of dimensions</LI>
     109        <LI><SPAN CLASS="codetxt">varout:</SPAN> Function when we want to output variable values</LI>
     110        <LI><SPAN CLASS="codetxt">varrmattr:</SPAN> Removing an attribute from a variable</LI>
     111        <LI><SPAN CLASS="codetxt">varrm:</SPAN> Removing a variable from a file</LI>
     112        <LI><SPAN CLASS="codetxt">VarVal_FillValue:</SPAN> Function to transform a given value from a given variable to _FillValue in a netCDF file</LI>
     113        <LI><SPAN CLASS="codetxt">vrattr:</SPAN> Function to remove an atribute from a variable</LI>
     114        <LI><SPAN CLASS="codetxt">WRF_d0Nref:</SPAN> Function for the generation of an extra WRF domain from a given one </LI>
     115        <LI><SPAN CLASS="codetxt">WRF_CFlonlat_creation:</SPAN> Function to add a CF-convention longitude/latitude variables in a WRF file</LI>
     116        <LI><SPAN CLASS="codetxt">WRF_CFtime_creation:</SPAN> Function to add a CF-convention time unit in a WRF file</LI>
     117        <LI><SPAN CLASS="codetxt">WRF_CFxtime_creation:</SPAN> Function to add a CF-convention time unit in a WRF file using variable 'XTIME'</LI>
     118        <LI><SPAN CLASS="codetxt">WRF_toCF:</SPAN> Function to pass a WRF original file to CF-conventions</LI>
    125119      </UL>
    126120    </DIV>

  • trunk/tools/documentation/plotting/2Dshad.html

    r1211 r1216  
    22  <HEAD>
    33    <META HTTP-EQUIV="Content-Type" CONTENT="text/html; CHARSET=utf-8"/>
    4     <TITLE>PyNCplot: plotting 2D shadow</TITLE>
    54    <LINK REL="stylesheet" TYPE="text/css" HREF="../PyNCplot.css"/>
    65  </HEAD>
    … …  
    1514    </DIV>
    1615    <DIV CLASS="valhelp">
    17 
     16    draw_2D_shad(ncfile, values, varn)<BR>
     17      ncfile= file to use<BR>
     18      values=[vnamefs]:[dimvals]:[dimxvn]:[dimyvn]:[dimxyfmt]:[colorbarvals]:<BR>
     19      &nbsp;&nbsp;[sminv],[smaxv]:[figt]:[kindfig]:[reverse]:[mapv]:[close]<BR>
     20      &nbsp;&nbsp;&nbsp;&nbsp;[vnamefs]: Name in the figure of the variable to be shaded<BR>
     21        [dimvals]: ',' list of [dimname]|[value] telling at which dimension of the <BR>
     22          variable a given value is required (-1, all the length)<BR>
     23        [dimx/yvn]: name of the variables with the values of the final dimensions (x,y)<BR>
     24        [dimxyfmt]=[dxs],[dxf],[Ndx],[ordx],[dys],[dyf],[Ndy],[ordx]: format of the values at each axis (or 'auto')<BR>
     25          [dxs]: style of x-axis ('auto' for 'pretty')<BR>
     26            'Nfix', values computed at even 'Ndx'<BR>
     27            'Vfix', values computed at even 'Ndx' increments<BR>
     28            'pretty', values computed following aprox. 'Ndx' at 'pretty' intervals (2.,2.5,4,5,10)<BR>
     29          [dxf]: format of the labels at the x-axis ('auto' for '%5g')<BR>
     30          [Ndx]: Number of ticks at the x-axis ('auto' for 5)<BR>
     31          [ordx]: angle of orientation of ticks at the x-axis ('auto' for horizontal)<BR>
     32          [dys]: style of y-axis ('auto' for 'pretty')<BR>
     33          [dyf]: format of the labels at the y-axis ('auto' for '%5g')<BR>
     34          [Ndy]: Number of ticks at the y-axis ('auto' for 5)<BR>
     35          [ordy]: angle of orientation of ticks at the y-axis ('auto' for horizontal)<BR>
     36        [colorbarvals]=[colbarn],[fmtcolorbar],[orientation]<BR>
     37          [colorbarn]: name of the color bar<BR>
     38          [fmtcolorbar]: format of the numbers in the color bar 'C'-like ('auto' for %6g)<BR>
     39          [orientation]: orientation of the colorbar ('vertical' (default, by 'auto'), 'horizontal')<BR>
     40        [smin/axv]: minimum and maximum value for the shading or:<BR>
     41          'Srange': for full range<BR>
     42          'Saroundmean@val': for mean-xtrm,mean+xtrm where xtrm = np.min(mean-min@val,max@val-mean)<BR>
     43          'Saroundminmax@val': for min*val,max*val<BR>
     44          'Saroundpercentile@val': for median-xtrm,median+xtrm where xtrm = np.min(median-percentile_(val),<BR>
     45            percentile_(100-val)-median)<BR>
     46          'Smean@val': for -xtrm,xtrm where xtrm = np.min(mean-min*@val,max*@val-mean)<BR>
     47          'Smedian@val': for -xtrm,xtrm where xtrm = np.min(median-min@val,max@val-median)<BR>
     48          'Spercentile@val': for -xtrm,xtrm where xtrm = np.min(median-percentile_(val),<BR>
     49             percentile_(100-val)-median)<BR>
     50        [figt]: title of the figure ('|' for spaces)<BR>
     51        [kindfig]: kind of figure<BR>
     52        [reverse]: Transformation of the values<BR>
     53          * 'transpose': reverse the axes (x-->y, y-->x)<BR>
     54          * 'flip'@[x/y]: flip the axis x or y<BR>
     55        [mapv]: map characteristics: [proj],[res]<BR>
     56          see full documentation: <HREF CLASS="lc" HREF="http://matplotlib.org/basemap" TARGET="_blank">http://matplotlib.org/basemap</A><BR>
     57          [proj]: projection<BR>
     58            * 'cyl', cilindric<BR>
     59            * 'lcc', lambert conformal<BR>
     60          [res]: resolution:<BR>
     61            * 'c', crude<BR>
     62            * 'l', low<BR>
     63            * 'i', intermediate<BR>
     64            * 'h', high<BR>
     65            * 'f', full<BR>
     66        [close]: Whether figure should be finished or not<BR>
     67      valules= 'rh:z|-1,x|-1:z|-1,x|-1:lat:pressure:BuPu:0.,100.:rh:pdf:flip@y:None'<BR>
     68      varn= [varsn] name of the variable to plot with shading<BR>
    1869    </DIV>
    1970    <DIV CLASS="valins">

  • trunk/tools/documentation/plotting/2Dshad_cont.html

    r1211 r1216  
    22  <HEAD>
    33    <META HTTP-EQUIV="Content-Type" CONTENT="text/html; CHARSET=utf-8"/>
    4     <TITLE>PyNCplot: plotting 2D shadow contour</TITLE>
    54    <LINK REL="stylesheet" TYPE="text/css" HREF="../PyNCplot.css"/>
    65  </HEAD>

  • trunk/tools/documentation/plotting/2Dshad_cont_time.html

    r1211 r1216  
    22  <HEAD>
    33    <META HTTP-EQUIV="Content-Type" CONTENT="text/html; CHARSET=utf-8"/>
    4     <TITLE>PyNCplot: plotting 2D shadow_time</TITLE>
    54    <LINK REL="stylesheet" TYPE="text/css" HREF="../PyNCplot.css"/>
    65  </HEAD>
    … …  
    98  <BODY>
    109    <DIV CLASS="valheader">
    11       2D shadow time plot
     10      2D shadow contour time plot
    1211    </DIV>
    1312    <DIV CLASS="valimg">

  • trunk/tools/documentation/plotting/intro.html

    r1211 r1216  
    3232      Available plots:
    3333      <UL>
    34        <LI> create_movie: Function to create a movie assuming ImageMagick installed! </LI>
    35        <LI> draw_2D_shad: plotting a fields with shading </LI>
    36        <LI> draw_2D_shad_cont: plotting two fields, one with shading and the other with contour lines </LI>
    37        <LI> draw_2D_shad_cont_time: plotting two fields, one with shading and the other with contour lines being one of the dimensions of time characteristics </LI>
    38        <LI> draw_2D_shad_line: plotting a fields with shading and another with line </LI>
    39        <LI> draw_2D_shad_line_time: plotting a fields with shading and a line with time values </LI>
    40        <LI> draw_2D_shad_time: plotting a fields with shading with time values </LI>
    41        <LI> draw_2lines: Fucntion to plot two lines in different axes (x/x2 or y/y2) </LI>
    42        <LI> draw_2lines_time: Function to plot two time-lines in different axes (x/x2 or y/y2) </LI>
    43        <LI> draw_barbs: Function to plot wind barbs </LI>
    44        <LI> draw_basins: Function to plot river basins with their discharge vector and basins id (from 'routing.nc') </LI>
    45        <LI> draw_lines: Function to draw different lines at the same time from different files </LI>
    46        <LI> draw_lines_time: Function to draw different lines at the same time from different files with times </LI>
    47        <LI> draw_Neighbourghood_evol: Function to draw the temporal evolution of a neighbourghood around a point </LI>
    48        <LI> draw_points: Function to plot a series of points </LI>
    49        <LI> draw_points_lonlat: Function to plot a series of lon/lat points </LI>
    50        <LI> draw_ptZvals: Function to plot a given list of points and values  </LI>
    51        <LI> draw_timeSeries: Function to draw a time-series </LI>
    52        <LI> draw_topo_geogrid: plotting geo_em.d[nn].nc topography from WPS files </LI>
    53        <LI> draw_topo_geogrid_boxes: plotting different geo_em.d[nn].nc topography from WPS files </LI>
    54        <LI> draw_trajectories: Function to draw different trajectories at the same time </LI>
    55        <LI> draw_vals_trajectories: Function to draw values from the outputs from 'compute_tevolboxtraj' </LI>
    56        <LI> draw_vectors: Function to plot wind vectors </LI>
    57        <LI> movievalslice: Function to provide variable slice according to a geneation of a movie </LI>
    58        <LI> variable_values: Function to give back values for a given variable </LI>
    59        <LI> draw_river_desc: Function to plot rivers' description from ORCHIDEE's routing scheme </LI>
    60        <LI> draw_subbasin: Function to plot subbasin from 'routnig.nc' ORCDHIEE </LI>
    61        <LI> draw_vertical_levels: plotting vertical levels distribution </LI>
     34       <LI><SPAN CLASS="codetxt"> create_movie:</SPAN> Function to create a movie assuming ImageMagick installed! </LI>
     35       <LI><SPAN CLASS="codetxt"> draw_2D_shad:</SPAN> plotting a fields with shading </LI>
     36       <LI><SPAN CLASS="codetxt"> draw_2D_shad_cont:</SPAN> plotting two fields, one with shading and the other with contour lines </LI>
     37       <LI><SPAN CLASS="codetxt"> draw_2D_shad_cont_time:</SPAN> plotting two fields, one with shading and the other with contour lines being one of the dimensions of time characteristics </LI>
     38       <LI><SPAN CLASS="codetxt">draw_2D_shad_line:</SPAN> plotting a fields with shading and another with line </LI>
     39       <LI><SPAN CLASS="codetxt">draw_2D_shad_line_time:</SPAN> plotting a fields with shading and a line with time values </LI>
     40       <LI><SPAN CLASS="codetxt">draw_2D_shad_time:</SPAN> plotting a fields with shading with time values </LI>
     41       <LI><SPAN CLASS="codetxt">draw_2lines:</SPAN> Fucntion to plot two lines in different axes (x/x2 or y/y2) </LI>
     42       <LI><SPAN CLASS="codetxt">draw_2lines_time:</SPAN> Function to plot two time-lines in different axes (x/x2 or y/y2) </LI>
     43       <LI><SPAN CLASS="codetxt">draw_barbs:</SPAN> Function to plot wind barbs </LI>
     44       <LI><SPAN CLASS="codetxt">draw_basins:</SPAN> Function to plot river basins with their discharge vector and basins id (from 'routing.nc') </LI>
     45       <LI><SPAN CLASS="codetxt">draw_lines:</SPAN> Function to draw different lines at the same time from different files </LI>
     46       <LI><SPAN CLASS="codetxt">draw_lines_time:</SPAN> Function to draw different lines at the same time from different files with times </LI>
     47       <LI><SPAN CLASS="codetxt">draw_Neighbourghood_evol:</SPAN> Function to draw the temporal evolution of a neighbourghood around a point </LI>
     48       <LI><SPAN CLASS="codetxt">draw_points:</SPAN> Function to plot a series of points </LI>
     49       <LI><SPAN CLASS="codetxt">draw_points_lonlat:</SPAN> Function to plot a series of lon/lat points </LI>
     50       <LI><SPAN CLASS="codetxt">draw_ptZvals:</SPAN> Function to plot a given list of points and values  </LI>
     51       <LI><SPAN CLASS="codetxt">draw_timeSeries:</SPAN> Function to draw a time-series </LI>
     52       <LI><SPAN CLASS="codetxt">draw_topo_geogrid:</SPAN> plotting geo_em.d[nn].nc topography from WPS files </LI>
     53       <LI><SPAN CLASS="codetxt">draw_topo_geogrid_boxes:</SPAN> plotting different geo_em.d[nn].nc topography from WPS files </LI>
     54       <LI><SPAN CLASS="codetxt">draw_trajectories:</SPAN> Function to draw different trajectories at the same time </LI>
     55       <LI><SPAN CLASS="codetxt">draw_vals_trajectories:</SPAN> Function to draw values from the outputs from 'compute_tevolboxtraj' </LI>
     56       <LI><SPAN CLASS="codetxt">draw_vectors:</SPAN> Function to plot wind vectors </LI>
     57       <LI><SPAN CLASS="codetxt">movievalslice:</SPAN> Function to provide variable slice according to a geneation of a movie </LI>
     58       <LI><SPAN CLASS="codetxt">variable_values:</SPAN> Function to give back values for a given variable </LI>
     59       <LI><SPAN CLASS="codetxt">draw_river_desc:</SPAN> Function to plot rivers' description from ORCHIDEE's routing scheme </LI>
     60       <LI><SPAN CLASS="codetxt">draw_subbasin:</SPAN> Function to plot subbasin from 'routnig.nc' ORCDHIEE </LI>
     61       <LI><SPAN CLASS="codetxt">draw_vertical_levels:</SPAN> plotting vertical levels distribution </LI>
    6262      </UL>
    6363    </DIV>
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