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| 1 | #!/bin/sh |
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| 2 | |
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| 3 | ## Job Name |
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| 4 | #PBS -N r_script |
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| 5 | |
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| 6 | ## Script to run a script in camelot, IPSL |
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| 7 | #PBS -m ae |
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| 8 | #PBS -M lluis.fita@lmd.jussieu.fr |
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| 9 | |
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| 10 | ## Joins standard and Error outputs in a single file |
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| 11 | #PBS -j oe |
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| 12 | |
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| 13 | ## Queue |
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| 14 | #PBS -q day |
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| 15 | |
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| 16 | ### Max run time |
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| 17 | #PBS -l walltime=24:00:00 |
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| 18 | |
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| 19 | ### Max memory |
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| 20 | #PBS -l vmem=20gb |
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| 21 | #PBS -l mem=20gb |
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| 22 | |
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| 23 | ## resources |
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| 24 | #PBS -l nodes=1:ppn=1 |
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| 25 | |
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| 26 | cd $PBS_O_WORKDIR |
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| 27 | |
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| 28 | Lscriptname=`expr length ${scriptname}0` |
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| 29 | if test ${Lscriptname} -le 1; then |
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| 30 | echo "ERROR -- error -- ERROR -- error" |
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| 31 | echo " No script name provided!!" |
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| 32 | exit |
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| 33 | fi |
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| 34 | |
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| 35 | echo "running '"${scriptname}"' ..." |
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| 36 | |
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| 37 | dateval=`date "+%Y%m%d%H%M%S"` |
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| 38 | |
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| 39 | rm -f ${PBS_JOBNAME}.o* |
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| 40 | rm -f run_${scriptname}_*.log |
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| 41 | |
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| 42 | date > run_${scriptname}_${dateval}.log |
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| 43 | bash ${scriptname} >& r_script0_${dateval}.log |
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| 44 | cat r_script0_${dateval}.log >> run_${scriptname}_${dateval}.log |
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| 45 | rm -f r_script0_${dateval}.log |
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| 46 | date >> run_${scriptname}_${dateval}.log |
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| 47 | |
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| 48 | ## e.g. # qsub -v scriptname='WRF_graphics.bash' run_script.pbs |
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