1 | import numpy as np |
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2 | import os |
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3 | from netCDF4 import Dataset as NetCDFFile |
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4 | import drawing_tools as drw |
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5 | from optparse import OptionParser |
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6 | import sys |
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7 | from cStringIO import StringIO |
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8 | |
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9 | ## g.e. # drawing.py -f /media/data2/etudes/WRF_LMDZ/WL_HyMeX/IIphase/medic950116/wlmdza/wrfout/wrfout_d01_1995-01-13_00:00:00 -o create_movie -S 'draw_2D_shad#Time@WRFTimes@10@95@191@1#tas:East_West|-1,North_South|-1,Time|2:longitude:latitude:Summer:270.,300.:tas|at|t=0:pdf:None:None' -v T2 |
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10 | ## g.e. # drawing.py -f wrfout_d01_1980-03-01_00\:00\:00_Time_B0-E48-I1.nc -o draw_2D_shad -S 'tas:East_West|-1,North_South|-1,Time|2:longitude:latitude:Summer:270.,300.:tas|at|t=0:pdf:None:cyl,i' -v T2 |
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11 | ## g.e. # drawing.py -f ~/etudes/domains/MEDCORDEX/geo_em.d01.nc -o draw_2D_shad_cont -S 'landmask,height:Time|0:Time|0:XLONG_M:XLAT_M:rainbow:fixc,k:%.2f:0,1:0.,3000.,10:landmask & height:pdf:False:lcc,i' -v LANDMASK,HGT_M |
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12 | ## g.e. # drawing.py -f ~/etudes/domains/MEDCORDEX/geo_em.d01.nc -o draw_2D_shad_cont -S 'height,landmask:Time|0:Time|0:XLONG_M:XLAT_M:terrain:fixc,k:None:0.,3000.:0,1,10:MEDCORDEX height & landmask:pdf:False:lcc,i' -v HGT_M,LANDMASK |
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13 | ## g.e. # drawing.py -o draw_2D_shad_line -f 'mean_dtcon-pluc-pres_lat.nc,mean_dtcon-pluc-pres_lat.nc' -S 'dtcon,prc:bottom_top|-1,south_north|-1:latmean:presmean:seismic,k:-5.,5.:monthly|dtcon|&|prc:pdf:flip@y:None:True' -v 'dtconmean,prcmean' |
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14 | ## g.e. # drawing.py -f 'geo_em.d02.nc' -o draw_topo_geogrid -S '0.,3000.:None:FF_3dom d02:png:cyl,i' |
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15 | ## g.e. # drawing.py -o draw_topo_geogrid_boxes -S '0.,3000.:None:FF domains:pdf:lcc,i:d01,d02,d03' -f geo_em.d01.nc,geo_em.d02.nc,geo_em.d03.nc |
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16 | ## g.e. # drawing.py -o draw_trajectories -f 'WRF/control/trajectory.dat@-1@/home/lluis/etudes/domains/WL_HyMeX_HighRes_C/geo_em.d03.nc#XLONG_M#XLAT_M,WRF_LMDZ/wlmdza/trajectory.dat@-1@/home/lluis/etudes/domains/WL_HyMeX_C/geo_em.d01.nc#XLONG_M#XLAT_M,WRF_LMDZ/wlmdzb/trajectory.dat@-1@/home/lluis/etudes/domains/WL_HyMeX_C/geo_em.d01.nc#XLONG_M#XLAT_M,WRF_LMDZ/wlmdzb_ii/trajectory.dat@-1@/home/lluis/etudes/domains/WL_HyMeX_C/geo_em.d01.nc#XLONG_M#XLAT_M' -S '$WRF_{CRM}$,$LMDZ_{AR4.0}$,$LMDZ_{NPv3.1}$,$LMDZ_{NPv3.1b}$|None|medicane trajectories|pdf|cyl,i' -v obs/trajectory.dat,satellite,-1 |
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17 | ## g.e. # drawing.py -o draw_vals_trajectories -f WRF_LMDZ/wlmdza/tevolboxtraj_T2.nc,WRF_LMDZ/wlmdzb/tevolboxtraj_T2.nc,WRF/control/tevolboxtraj_T2.nc -S 'mean:-1:$WRF_{CRM}$,$LMDZ_{AR4.0}$,$LMDZ_{NPv3.1}$@4:tas:time|($[DD]^[HH]$):exct,6,h:$%d^{%H}$:trajectory|following|mean:pdf' -v T2 |
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18 | ## g.e. # drawing.py -o draw_2D_shad_time -f 'netcdf_concatenated.nc' -S 'dtcon:Time|-1,bottom_top|-1:presmean:time:seismic:-3.e-6,3.e-6:monthly|dtcon:pdf:transpose:time|hours!since!1949-12-01|exct,2,d|%d|date!([DD])|x:True' -v 'dtconmean' |
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19 | ## g.e. # drawing.py -o variable_values -S PSFC |
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20 | ## g.e. # drawing.py -o draw_timeSeries -f wrfout_d01_1979-12-01_00:00:00_bottom_top_B6-E6-I1_south_north_B3-E3-I1_west_east_B26-E26-I1.nc -S 'dt_con:time|($[DD]^{[HH]}$):exct,12,h:$%d^{%H}$:time|evolution|at|-1|6|3|26:1:pdf' -v 'LDQCON,time' |
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21 | ## g.e. # drawing.py -f wrfout_d01_1979-12-01_00:00:00 -o draw_Neighbourghood_evol -S 'q:Time|-1|Times,bottom_top|6|ZNU,south_north|3|XLAT,west_east|26|XLONG:south_north,west_east:5:auto:time|($[DD]^{[HH]}$),time|($[DD]^{[HH]}$):exct,2,h|exct,1,d:$%d^{%H}$,$%d^{%H}$:5|pts|neighbourghood|temporal|evolution:0.0,0.004:BuPu:pdf:True' -v QVAPOR |
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22 | |
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23 | main = 'drawing.py' |
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24 | |
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25 | errormsg = 'ERROR -- error -- ERROR -- error' |
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26 | warnmsg = 'WARNING -- waring -- WARNING -- warning' |
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27 | fillValue=1.e20 |
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28 | |
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29 | namegraphics = ['create_movie', 'draw_2D_shad', 'draw_2D_shad_time', \ |
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30 | 'draw_2D_shad_cont', 'draw_2D_shad_cont_time', 'draw_2D_shad_line', \ |
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31 | 'draw_2D_shad_line_time', 'draw_timeSeries', 'draw_topo_geogrid', \ |
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32 | 'draw_topo_geogrid_boxes', 'draw_trajectories', 'draw_vals_trajectories', \ |
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33 | 'draw_lines', 'draw_Neighbourghood_evol', 'list_graphics', 'variable_values'] |
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34 | |
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35 | def draw_2D_shad(ncfile, values, varn): |
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36 | """ plotting a fields with shading |
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37 | draw_2D_shad(ncfile, values, varn) |
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38 | ncfile= file to use |
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39 | values=[vnamefs]:[dimvals]:[dimxvn]:[dimyvn]:[colorbar]:[sminv],[smaxv]:[figt]: |
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40 | [kindfig]:[reverse]:[mapv]:[close] |
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41 | [vnamefs]: Name in the figure of the variable to be shaded |
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42 | [dimvals]: ',' list of [dimname]|[value] telling at which dimension of the |
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43 | variable a given value is required (-1, all the length) |
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44 | [dimx/yvn]: name of the variables with the values of the final dimensions (x,y) |
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45 | [colorbar]: name of the color bar |
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46 | [smin/axv]: minimum and maximum value for the shading or: |
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47 | 'Srange': for full range |
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48 | 'Saroundmean@val': for mean-xtrm,mean+xtrm where xtrm = np.min(mean-min@val,max@val-mean) |
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49 | 'Saroundminmax@val': for min*val,max*val |
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50 | 'Saroundpercentile@val': for median-xtrm,median+xtrm where xtrm = np.min(median-percentile_(val), |
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51 | percentile_(100-val)-median) |
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52 | 'Smean@val': for -xtrm,xtrm where xtrm = np.min(mean-min*@val,max*@val-mean) |
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53 | 'Smedian@val': for -xtrm,xtrm where xtrm = np.min(median-min@val,max@val-median) |
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54 | 'Spercentile@val': for -xtrm,xtrm where xtrm = np.min(median-percentile_(val), |
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55 | percentile_(100-val)-median) |
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56 | [figt]: title of the figure ('|' for spaces) |
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57 | [kindfig]: kind of figure |
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58 | [reverse]: Transformation of the values |
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59 | * 'transpose': reverse the axes (x-->y, y-->x) |
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60 | * 'flip'@[x/y]: flip the axis x or y |
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61 | [mapv]: map characteristics: [proj],[res] |
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62 | see full documentation: http://matplotlib.org/basemap/ |
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63 | [proj]: projection |
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64 | * 'cyl', cilindric |
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65 | * 'lcc', lamvbert conformal |
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66 | [res]: resolution: |
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67 | * 'c', crude |
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68 | * 'l', low |
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69 | * 'i', intermediate |
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70 | * 'h', high |
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71 | * 'f', full |
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72 | valules= 'rh:z|-1,x|-1:z|-1,x|-1:lat:pressure:BuPu:0.,100.:rh:pdf:flip@y:None' |
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73 | varn= [varsn] name of the variable to plot with shading |
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74 | """ |
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75 | |
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76 | fname = 'draw_2D_shad' |
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77 | if values == 'h': |
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78 | print fname + '_____________________________________________________________' |
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79 | print draw_2D_shad.__doc__ |
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80 | quit() |
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81 | |
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82 | expectargs = ['[vnamefs]', '[dimvals]', '[dimxvn]', '[dimyvn]', '[colorbar]', \ |
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83 | '[sminv],[smaxv]', '[figt]', '[kindfig]', '[reverse]', '[mapv]', '[close]'] |
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84 | |
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85 | drw.check_arguments(fname,len(expectargs),values,':',expectargs) |
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86 | |
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87 | vnamesfig = values.split(':')[0] |
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88 | dimvals= values.split(':')[1].replace('|',':') |
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89 | vdimxn = values.split(':')[2] |
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90 | vdimyn = values.split(':')[3] |
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91 | colbarn = values.split(':')[4] |
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92 | shadminmax = values.split(':')[5] |
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93 | figtitle = values.split(':')[6].replace('|',' ') |
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94 | figkind = values.split(':')[7] |
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95 | revals = values.split(':')[8] |
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96 | mapvalue = values.split(':')[9] |
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97 | # varn = values.split(':')[10] |
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98 | |
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99 | ncfiles = ncfile |
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100 | |
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101 | if not os.path.isfile(ncfiles): |
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102 | print errormsg |
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103 | print ' ' + fname + ': shading file "' + ncfiles + '" does not exist !!' |
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104 | quit(-1) |
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105 | |
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106 | objsf = NetCDFFile(ncfiles, 'r') |
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107 | |
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108 | varns = varn.split(',')[0] |
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109 | |
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110 | if not objsf.variables.has_key(varns): |
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111 | print errormsg |
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112 | print ' ' + fname + ': shading file "' + ncfiles + \ |
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113 | '" does not have variable "' + varns + '" !!' |
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114 | quit(-1) |
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115 | |
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116 | # Variables' values |
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117 | objvars = objsf.variables[varns] |
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118 | |
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119 | valshad, dimsshad = drw.slice_variable(objvars, dimvals.replace(',','|')) |
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120 | |
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121 | # Dimensions names |
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122 | ## print fname + ' obj dimnames: ', objvars.dimensions, dimvals, len(dimvals.split(',')) |
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123 | ## dimnamesv = [] |
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124 | ## for idd in range(len(objvars.dimensions)): |
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125 | ## cutdim = False |
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126 | ## for idc in range(len(dimvals.split(','))): |
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127 | ## dimcutn = dimvals.split(',')[idc].split(':')[0] |
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128 | ## print objvars.dimensions[idd], dimcutn |
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129 | ## if objvars.dimensions[idd] == dimcutn: |
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130 | ## cutdim = True |
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131 | ## break |
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132 | ## if not cutdim: dimnamesv.append(objvars.dimensions[idd]) |
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133 | dimnamesv = [vdimyn, vdimxn] |
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134 | |
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135 | if drw.searchInlist(objvars.ncattrs(),'units'): |
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136 | varunits = objvars.getncattr('units') |
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137 | else: |
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138 | print warnmsg |
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139 | print ' ' + fname + ": variable '" + varn + "' without units!!" |
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140 | varunits = '-' |
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141 | |
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142 | if not objsf.variables.has_key(vdimxn): |
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143 | print errormsg |
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144 | print ' ' + fname + ': shading file "' + ncfiles + \ |
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145 | '" does not have dimension variable "' + vdimxn + '" !!' |
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146 | quit(-1) |
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147 | if not objsf.variables.has_key(vdimyn): |
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148 | print errormsg |
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149 | print ' ' + fname + ': shading file "' + ncfiles + \ |
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150 | '" does not have dimension variable "' + vdimyn + '" !!' |
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151 | quit(-1) |
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152 | |
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153 | objdimx = objsf.variables[vdimxn] |
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154 | objdimy = objsf.variables[vdimyn] |
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155 | if drw.searchInlist(objdimx.ncattrs(),'units'): |
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156 | odimxu = objdimx.getncattr('units') |
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157 | else: |
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158 | print warnmsg |
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159 | print ' ' + fname + ": variable dimension '" + vdimxn + "' without units!!" |
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160 | odimxu = '-' |
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161 | |
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162 | if drw.searchInlist(objdimy.ncattrs(),'units'): |
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163 | odimyu = objdimy.getncattr('units') |
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164 | else: |
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165 | print warnmsg |
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166 | print ' ' + fname + ": variable dimension '" + vdimyn + "' without units!!" |
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167 | odimyu = '-' |
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168 | |
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169 | if len(objdimx.shape) <= 2: |
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170 | # odimxv = objdimx[valshad.shape] |
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171 | # odimyv = objdimy[valshad.shape] |
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172 | odimxv = objdimx[:] |
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173 | odimyv = objdimy[:] |
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174 | |
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175 | elif len(objdimx.shape) == 3: |
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176 | # dimcut = [0, slice(0,valshad.shape[0]), slice(0,valshad.shape[1])] |
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177 | # odimxv = objdimx[tuple(dimcut)] |
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178 | # odimyv = objdimy[tuple(dimcut)] |
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179 | odimxv = objdimx[0,:] |
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180 | odimyv = objdimy[0,:] |
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181 | else: |
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182 | print errormsg |
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183 | print ' ' + fname + ': shape of dimension variable:', objdimx.shape, \ |
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184 | ' not ready!!' |
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185 | quit(-1) |
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186 | |
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187 | shading_nx = [] |
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188 | if shadminmax.split(',')[0][0:1] != 'S': |
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189 | shading_nx.append(np.float(shadminmax.split(',')[0])) |
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190 | else: |
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191 | shading_nx.append(shadminmax.split(',')[0]) |
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192 | |
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193 | if shadminmax.split(',')[1][0:1] != 'S': |
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194 | shading_nx.append(np.float(shadminmax.split(',')[1])) |
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195 | else: |
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196 | shading_nx.append(shadminmax.split(',')[1]) |
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197 | |
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198 | if mapvalue == 'None': mapvalue = None |
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199 | |
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200 | drw.plot_2D_shadow(valshad, vnamesfig, odimxv, odimyv, odimxu, odimyu, dimnamesv,\ |
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201 | colbarn, shading_nx, varunits, figtitle, figkind, revals, mapvalue, True) |
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202 | |
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203 | return |
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204 | |
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205 | def draw_2D_shad_time(ncfile, values, varn): |
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206 | """ plotting a fields with shading with time values |
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207 | draw_2D_shad(ncfile, values, varn) |
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208 | ncfile= file to use |
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209 | values=[vnamefs]:[dimvals]:[dimxvn]:[dimyvn]:[colorbar]:[sminv],[smaxv]:[figt]: |
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210 | [kindfig]:[reverse]:[timevals]:[close] |
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211 | [vnamefs]: Name in the figure of the variable to be shaded |
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212 | [dimvals]: ',' list of [dimname]|[value] telling at which dimension of the |
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213 | variable a given value is required (-1, all the length) |
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214 | [dimx/yvn]: name of the variables with the values of the final dimensions (x,y) |
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215 | [colorbar]: name of the color bar |
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216 | [smin/axv]: minimum and maximum value for the shading or: |
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217 | 'Srange': for full range |
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218 | 'Saroundmean@val': for mean-xtrm,mean+xtrm where xtrm = np.min(mean-min@val,max@val-mean) |
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219 | 'Saroundminmax@val': for min*val,max*val |
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220 | 'Saroundpercentile@val': for median-xtrm,median+xtrm where xtrm = np.min(median-percentile_(val), |
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221 | percentile_(100-val)-median) |
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222 | 'Smean@val': for -xtrm,xtrm where xtrm = np.min(mean-min*@val,max*@val-mean) |
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223 | 'Smedian@val': for -xtrm,xtrm where xtrm = np.min(median-min@val,max@val-median) |
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224 | 'Spercentile@val': for -xtrm,xtrm where xtrm = np.min(median-percentile_(val), |
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225 | percentile_(100-val)-median) |
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226 | [figt]: title of the figure ('|' for spaces) |
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227 | [kindfig]: kind of figure |
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228 | [reverse]: Transformation of the values |
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229 | * 'transpose': reverse the axes (x-->y, y-->x) |
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230 | * 'flip'@[x/y]: flip the axis x or y |
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231 | [timevals]: [timen]|[units]|[kind]|[tfmt]|[label]|[timeaxis] time labels characteristics |
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232 | [timen]; name of the time variable |
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233 | [units]; units string according to CF conventions ([tunits] since |
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234 | [YYYY]-[MM]-[DD] [[HH]:[MI]:[SS]], '!' for spaces) |
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235 | [kind]; kind of output |
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236 | 'Nval': according to a given number of values as 'Nval',[Nval] |
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237 | 'exct': according to an exact time unit as 'exct',[tunit]; |
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238 | tunit= [Nunits],[tu]; [tu]= 'c': centuries, 'y': year, 'm': month, |
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239 | 'w': week, 'd': day, 'h': hour, 'i': minute, 's': second, |
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240 | 'l': milisecond |
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241 | [tfmt]; desired format |
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242 | [label]; label at the graph ('!' for spaces) |
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243 | [close]: should figure be closed (finished) |
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244 | values='dtcon:Time|-1,bottom_top|-1:presmean:time:seismic:-3.e-6,3.e-6:monthly|' |
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245 | 'dtcon:pdf:transpose:time|hours!since!1949-12-01|exct,2,d|%d|date!([DD])|x:True |
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246 | varn= [varsn] name of the variable to plot with shading |
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247 | """ |
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248 | fname = 'draw_2D_shad_time' |
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249 | |
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250 | if values == 'h': |
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251 | print fname + '_____________________________________________________________' |
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252 | print draw_2D_shad_time.__doc__ |
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253 | quit() |
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254 | |
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255 | farguments = ['[vnamefs]', '[dimvals]', '[dimxvn]', '[dimyvn]', '[colorbar]', \ |
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256 | '[sminv],[smaxv]', '[figt]', '[kindfig]', '[reverse]', '[timevals]', '[close]'] |
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257 | drw.check_arguments(fname,11,values,':',farguments) |
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258 | |
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259 | vnamesfig = values.split(':')[0] |
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260 | dimvals= values.split(':')[1].replace('|',':') |
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261 | vdimxn = values.split(':')[2] |
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262 | vdimyn = values.split(':')[3] |
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263 | colbarn = values.split(':')[4] |
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264 | shadminmax = values.split(':')[5] |
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265 | figtitle = values.split(':')[6].replace('|',' ') |
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266 | figkind = values.split(':')[7] |
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267 | revals = values.split(':')[8] |
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268 | timevals = values.split(':')[9] |
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269 | close = values.split(':')[10] |
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270 | |
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271 | ncfiles = ncfile |
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272 | |
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273 | if not os.path.isfile(ncfiles): |
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274 | print errormsg |
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275 | print ' ' + fname + ': shading file "' + ncfiles + '" does not exist !!' |
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276 | quit(-1) |
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277 | |
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278 | objsf = NetCDFFile(ncfiles, 'r') |
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279 | |
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280 | varns = varn.split(',')[0] |
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281 | |
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282 | if not objsf.variables.has_key(varns): |
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283 | print errormsg |
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284 | print ' ' + fname + ': shading file "' + ncfiles + \ |
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285 | '" does not have variable "' + varns + '" !!' |
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286 | quit(-1) |
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287 | |
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288 | # Variables' values |
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289 | objvars = objsf.variables[varns] |
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290 | |
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291 | valshad, dimsshad = drw.slice_variable(objvars, dimvals.replace(',','|')) |
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292 | |
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293 | dimnamesv = [vdimyn, vdimxn] |
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294 | |
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295 | varunits = objvars.getncattr('units') |
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296 | |
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297 | if not objsf.variables.has_key(vdimxn): |
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298 | print errormsg |
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299 | print ' ' + fname + ': shading file "' + ncfiles + \ |
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300 | '" does not have dimension variable "' + vdimxn + '" !!' |
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301 | quit(-1) |
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302 | if not objsf.variables.has_key(vdimyn): |
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303 | print errormsg |
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304 | print ' ' + fname + ': shading file "' + ncfiles + \ |
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305 | '" does not have dimensino variable "' + vdimyn + '" !!' |
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306 | quit(-1) |
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307 | |
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308 | objdimx = objsf.variables[vdimxn] |
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309 | objdimy = objsf.variables[vdimyn] |
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310 | odimxu = objdimx.getncattr('units') |
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311 | odimyu = objdimy.getncattr('units') |
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312 | |
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313 | if len(objdimx.shape) <= 2: |
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314 | odimxv = objdimx[:] |
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315 | odimyv = objdimy[:] |
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316 | |
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317 | elif len(objdimx.shape) == 3: |
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318 | odimxv = objdimx[0,:] |
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319 | odimyv = objdimy[0,:] |
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320 | else: |
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321 | print errormsg |
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322 | print ' ' + fname + ': shape of dimension variable:', objdimx.shape, \ |
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323 | ' not ready!!' |
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324 | quit(-1) |
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325 | |
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326 | timename = timevals.split('|')[0] |
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327 | timeunit = timevals.split('|')[1].replace('!',' ') |
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328 | timekind = timevals.split('|')[2] |
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329 | timefmt = timevals.split('|')[3] |
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330 | timelabel = timevals.split('|')[4].replace('!',' ') |
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331 | |
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332 | if vdimxn == timename: |
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333 | odimxv = objsf.variables[vdimxn][:] |
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334 | odimxu = timelabel |
---|
335 | timeaxis = 'x' |
---|
336 | odimyv = objsf.variables[vdimyn] |
---|
337 | odimyu = odimyv.getncattr('units') |
---|
338 | timepos, timelabels = drw.CFtimes_plot(odimxv, timeunit, timekind, timefmt) |
---|
339 | elif vdimyn == timename: |
---|
340 | odimyv = objsf.variables[vdimyn][:] |
---|
341 | odimyu = timelabel |
---|
342 | timeaxis = 'y' |
---|
343 | odimxv = objsf.variables[vdimxn] |
---|
344 | odimxu = odimxv.getncattr('units') |
---|
345 | timepos, timelabels = drw.CFtimes_plot(odimyv, timeunit, timekind, timefmt) |
---|
346 | else: |
---|
347 | print errormsg |
---|
348 | print ' ' + fname + ": time variable '" + timename + "' not found!!" |
---|
349 | quit(-1) |
---|
350 | |
---|
351 | shading_nx = [] |
---|
352 | if shadminmax.split(',')[0][0:1] != 'S': |
---|
353 | shading_nx.append(np.float(shadminmax.split(',')[0])) |
---|
354 | else: |
---|
355 | shading_nx.append(shadminmax.split(',')[0]) |
---|
356 | |
---|
357 | if shadminmax.split(',')[1][0:1] != 'S': |
---|
358 | shading_nx.append(np.float(shadminmax.split(',')[1])) |
---|
359 | else: |
---|
360 | shading_nx.append(shadminmax.split(',')[1]) |
---|
361 | |
---|
362 | closeval = drw.Str_Bool(close) |
---|
363 | |
---|
364 | drw.plot_2D_shadow_time(valshad, vnamesfig, odimxv, odimyv, odimxu, odimyu, \ |
---|
365 | dimnamesv, colbarn, shading_nx, varunits, figtitle, figkind, revals, timeaxis, \ |
---|
366 | timepos, timelabels, closeval) |
---|
367 | |
---|
368 | return |
---|
369 | |
---|
370 | def draw_2D_shad_cont(ncfile, values, varn): |
---|
371 | """ plotting two fields, one with shading and the other with contour lines |
---|
372 | draw_2D_shad_cont(ncfile, values, varn) |
---|
373 | ncfile= [ncfilevars],[ncfilevarc] files to use (one value, same file) |
---|
374 | values=[vnamefs]:[dimvals]:[dimvalc]:[dimxvn]:[dimyvn]:[colorbar]:[ckind]:[clabfmt]:[sminv],[smaxv]:[sminc],[smaxv],[Nlev]:[figt]:[kindfig]:[reverse]:[mapv] |
---|
375 | [vnamefs],[vnamefc]: Name in the figure of the shaded and the contour variables |
---|
376 | [dimvals/c]: list of [dimname]|[value] telling at which dimension of the |
---|
377 | variable a given value is required (no dimension name, all the length) |
---|
378 | [dimx/yvn]: ',' list with the name of the variables with the values of the dimensions |
---|
379 | [colorbar]: name of the color bar |
---|
380 | [ckind]: kind of contours |
---|
381 | 'cmap': as it gets from colorbar |
---|
382 | 'fixc,[colname]': fixed color [colname], all stright lines |
---|
383 | 'fixsigc,[colname]': fixed color [colname], >0 stright, <0 dashed line |
---|
384 | [clabfmt]: format of the labels in the contour (None, also possible) |
---|
385 | [smin/axv]: minimum and maximum value for the shading |
---|
386 | [sminc]:[smaxv]:[Nlev]: minimum, maximum and number of values for the contour |
---|
387 | [figt]: title of the figure ('|' for spaces) |
---|
388 | [kindfig]: kind of figure |
---|
389 | [reverse]: does the values be transposed? 'True/False', |
---|
390 | [mapv]: map characteristics: [proj],[res] |
---|
391 | see full documentation: http://matplotlib.org/basemap/ |
---|
392 | [proj]: projection |
---|
393 | * 'cyl', cilindric |
---|
394 | * 'lcc', lamvbert conformal |
---|
395 | [res]: resolution: |
---|
396 | * 'c', crude |
---|
397 | * 'l', low |
---|
398 | * 'i', intermediate |
---|
399 | * 'h', high |
---|
400 | * 'f', full |
---|
401 | valules= 'rh,ta:z|-1,x|-1:z|-1,x|-1:lat:pressure:BuPu:fixsigc,black:%d:0.,100.:195.,305.,7:Meridonal|average|of|rh|&|ta:pdf:flip@y:None' |
---|
402 | varn= [varsn],[varcn] name of the variable to plot with shading variable with contour |
---|
403 | """ |
---|
404 | |
---|
405 | fname = 'draw_2D_shad_cont' |
---|
406 | if values == 'h': |
---|
407 | print fname + '_____________________________________________________________' |
---|
408 | print draw_2D_shad_cont.__doc__ |
---|
409 | quit() |
---|
410 | |
---|
411 | vnamesfig = values.split(':')[0].split(',') |
---|
412 | dimvals= values.split(':')[1].replace('|',':') |
---|
413 | dimvalc= values.split(':')[2].replace('|',':') |
---|
414 | vdimxn = values.split(':')[3] |
---|
415 | vdimyn = values.split(':')[4] |
---|
416 | colbarn = values.split(':')[5] |
---|
417 | countkind = values.split(':')[6] |
---|
418 | countlabelfmt = values.split(':')[7] |
---|
419 | shadminmax = values.split(':')[8] |
---|
420 | contlevels = values.split(':')[9] |
---|
421 | figtitle = values.split(':')[10].replace('|',' ') |
---|
422 | figkind = values.split(':')[11] |
---|
423 | revals = values.split(':')[12] |
---|
424 | mapvalue = values.split(':')[13] |
---|
425 | |
---|
426 | if2filenames = ncfile.find(',') |
---|
427 | |
---|
428 | if if2filenames != -1: |
---|
429 | ncfiles = ncfile.split(',')[0] |
---|
430 | ncfilec = ncfile.split(',')[1] |
---|
431 | else: |
---|
432 | ncfiles = ncfile |
---|
433 | ncfilec = ncfile |
---|
434 | |
---|
435 | if not os.path.isfile(ncfiles): |
---|
436 | print errormsg |
---|
437 | print ' ' + fname + ': shading file "' + ncfiles + '" does not exist !!' |
---|
438 | quit(-1) |
---|
439 | |
---|
440 | if not os.path.isfile(ncfilec): |
---|
441 | print errormsg |
---|
442 | print ' ' + fname + ': contour file "' + ncfilec + '" does not exist !!' |
---|
443 | quit(-1) |
---|
444 | |
---|
445 | objsf = NetCDFFile(ncfiles, 'r') |
---|
446 | objcf = NetCDFFile(ncfilec, 'r') |
---|
447 | |
---|
448 | varns = varn.split(',')[0] |
---|
449 | varnc = varn.split(',')[1] |
---|
450 | |
---|
451 | if not objsf.variables.has_key(varns): |
---|
452 | print errormsg |
---|
453 | print ' ' + fname + ': shading file "' + ncfiles + \ |
---|
454 | '" does not have variable "' + varns + '" !!' |
---|
455 | quit(-1) |
---|
456 | |
---|
457 | if not objcf.variables.has_key(varnc): |
---|
458 | print errormsg |
---|
459 | print ' ' + fname + ': contour file "' + ncfilec + \ |
---|
460 | '" does not have variable "' + varnc + '" !!' |
---|
461 | quit(-1) |
---|
462 | |
---|
463 | # Variables' values |
---|
464 | objvars = objsf.variables[varns] |
---|
465 | objvarc = objcf.variables[varnc] |
---|
466 | |
---|
467 | if len(objvars.shape) != len(objvarc.shape): |
---|
468 | print errormsg |
---|
469 | print ' ' + fname + ': shading variable "' + varns + '" has a shape: ', \ |
---|
470 | objvars.shape, 'different than contour variable "' + varnc + '": ', \ |
---|
471 | objvarc.shape,' !!!' |
---|
472 | quit(-1) |
---|
473 | |
---|
474 | for idim in range(len(objvars.shape)): |
---|
475 | if objvars.shape[idim] != objvarc.shape[idim]: |
---|
476 | print errormsg |
---|
477 | print ' ' + fname + ': shading variable "' + varns + '" has a shape: ', \ |
---|
478 | objvars.shape, 'different than contour variable "' + varnc + '": ', \ |
---|
479 | objvarc.shape,' !!!' |
---|
480 | quit(-1) |
---|
481 | |
---|
482 | valshad, dimsshad = drw.slice_variable(objvars, dimvals.replace(',','|')) |
---|
483 | valcont, dimscont = drw.slice_variable(objvarc, dimvalc.replace(',','|')) |
---|
484 | |
---|
485 | # Dimensions names |
---|
486 | ## print fname + ' obj dimnames: ', objvars.dimensions, dimvals, len(dimvals.split(',')) |
---|
487 | ## dimnamesv = [] |
---|
488 | ## for idd in range(len(objvars.dimensions)): |
---|
489 | ## cutdim = False |
---|
490 | ## for idc in range(len(dimvals.split(','))): |
---|
491 | ## dimcutn = dimvals.split(',')[idc].split(':')[0] |
---|
492 | ## print objvars.dimensions[idd], dimcutn |
---|
493 | ## if objvars.dimensions[idd] == dimcutn: |
---|
494 | ## cutdim = True |
---|
495 | ## break |
---|
496 | ## if not cutdim: dimnamesv.append(objvars.dimensions[idd]) |
---|
497 | dimnamesv = [vdimyn, vdimxn] |
---|
498 | |
---|
499 | varunits = [] |
---|
500 | varunits.append(objvars.getncattr('units')) |
---|
501 | varunits.append(objvarc.getncattr('units')) |
---|
502 | |
---|
503 | if not objsf.variables.has_key(vdimxn): |
---|
504 | print errormsg |
---|
505 | print ' ' + fname + ': shading file "' + ncfiles + \ |
---|
506 | '" does not have dimension variable "' + vdimxn + '" !!' |
---|
507 | quit(-1) |
---|
508 | if not objsf.variables.has_key(vdimyn): |
---|
509 | print errormsg |
---|
510 | print ' ' + fname + ': shading file "' + ncfiles + \ |
---|
511 | '" does not have dimensino variable "' + vdimyn + '" !!' |
---|
512 | quit(-1) |
---|
513 | |
---|
514 | objdimx = objsf.variables[vdimxn] |
---|
515 | objdimy = objsf.variables[vdimyn] |
---|
516 | odimxu = objdimx.getncattr('units') |
---|
517 | odimyu = objdimy.getncattr('units') |
---|
518 | |
---|
519 | if len(objdimx.shape) <= 2: |
---|
520 | # odimxv = objdimx[valshad.shape] |
---|
521 | # odimyv = objdimy[valshad.shape] |
---|
522 | odimxv = objdimx[:] |
---|
523 | odimyv = objdimy[:] |
---|
524 | |
---|
525 | elif len(objdimx.shape) == 3: |
---|
526 | # dimcut = [0, slice(0,valshad.shape[0]), slice(0,valshad.shape[1])] |
---|
527 | # odimxv = objdimx[tuple(dimcut)] |
---|
528 | # odimyv = objdimy[tuple(dimcut)] |
---|
529 | odimxv = objdimx[0,:] |
---|
530 | odimyv = objdimy[0,:] |
---|
531 | else: |
---|
532 | print errormsg |
---|
533 | print ' ' + fname + ': shape of dimension variable:', objdimx.shape, \ |
---|
534 | ' not ready!!' |
---|
535 | quit(-1) |
---|
536 | |
---|
537 | if countlabelfmt == 'None': |
---|
538 | countlfmt = None |
---|
539 | else: |
---|
540 | countlfmt = countlabelfmt |
---|
541 | |
---|
542 | shading_nx = np.zeros((2), dtype=np.float) |
---|
543 | shading_nx[0] = np.float(shadminmax.split(',')[0]) |
---|
544 | shading_nx[1] = np.float(shadminmax.split(',')[1]) |
---|
545 | |
---|
546 | clevmin = np.float(contlevels.split(',')[0]) |
---|
547 | clevmax = np.float(contlevels.split(',')[1]) |
---|
548 | Nclevels = int(contlevels.split(',')[2]) |
---|
549 | |
---|
550 | levels_cont = drw.pretty_int(clevmin, clevmax, Nclevels) |
---|
551 | |
---|
552 | if len(levels_cont) <= 1: |
---|
553 | print warnmsg |
---|
554 | print ' ' + fname + ': wrong contour levels:', levels_cont,' !!' |
---|
555 | del(levels_cont) |
---|
556 | levels_cont = np.zeros((Nclevels), dtype=np.float) |
---|
557 | levels_cont = np.arange(7)*(clevmax - clevmin)/(Nclevels-1) |
---|
558 | print ' generating default ones: ',levels_cont |
---|
559 | |
---|
560 | if mapvalue == 'None': mapvalue = None |
---|
561 | |
---|
562 | drw.plot_2D_shadow_contour(valshad, valcont, vnamesfig, odimxv, odimyv, odimxu, \ |
---|
563 | odimyu, dimnamesv, colbarn, countkind, countlfmt, shading_nx, levels_cont, \ |
---|
564 | varunits, figtitle, figkind, revals, mapvalue) |
---|
565 | |
---|
566 | return |
---|
567 | |
---|
568 | def draw_2D_shad_cont_time(ncfile, values, varn): |
---|
569 | """ plotting two fields, one with shading and the other with contour lines being |
---|
570 | one of the dimensions of time characteristics |
---|
571 | draw_2D_shad_cont(ncfile, values, varn) |
---|
572 | ncfile= [ncfilevars],[ncfilevarc] files to use (one value, same file) |
---|
573 | values=[vnamefs]:[dimvals]:[dimvalc]:[dimxvn]:[dimyvn]:[colorbar]:[ckind]:[clabfmt]:[sminv],[smaxv]:[sminc],[smaxv],[Nlev]:[figt]:[kindfig]:[reverse]:[timevals]:[mapv] |
---|
574 | [vnamefs],[vnamefc]: Name in the figure of the shaded and the contour variables |
---|
575 | [dimvals/c]: list of [dimname]|[value] telling at which dimension of the |
---|
576 | variable a given value is required (no dimension name, all the length) |
---|
577 | [dimx/yvn]: ',' list with the name of the variables with the values of the dimensions |
---|
578 | [colorbar]: name of the color bar |
---|
579 | [ckind]: kind of contours |
---|
580 | 'cmap': as it gets from colorbar |
---|
581 | 'fixc,[colname]': fixed color [colname], all stright lines |
---|
582 | 'fixsigc,[colname]': fixed color [colname], >0 stright, <0 dashed line |
---|
583 | [clabfmt]: format of the labels in the contour (None, also possible) |
---|
584 | [smin/axv]: minimum and maximum value for the shading |
---|
585 | [sminc]:[smaxv]:[Nlev]: minimum, maximum and number of values for the contour |
---|
586 | [figt]: title of the figure ('|' for spaces) |
---|
587 | [kindfig]: kind of figure |
---|
588 | [reverse]: modification to the dimensions: |
---|
589 | 'transposed': transpose matrices |
---|
590 | 'flip',[x/y]: flip only the dimension [x] or [y] |
---|
591 | [timevals]: [timen]|[units]|[kind]|[tfmt]|[label] time labels characteristics |
---|
592 | [timen]; name of the time variable |
---|
593 | [units]; units string according to CF conventions ([tunits] since |
---|
594 | [YYYY]-[MM]-[DD] [[HH]:[MI]:[SS]], '!' for spaces) |
---|
595 | [kind]; kind of output |
---|
596 | 'Nval': according to a given number of values as 'Nval',[Nval] |
---|
597 | 'exct': according to an exact time unit as 'exct',[tunit]; |
---|
598 | tunit= [Nunits],[tu]; [tu]= 'c': centuries, 'y': year, 'm': month, |
---|
599 | 'w': week, 'd': day, 'h': hour, 'i': minute, 's': second, |
---|
600 | 'l': milisecond |
---|
601 | [tfmt]; desired format |
---|
602 | [label]; label at the graph ('!' for spaces) |
---|
603 | [mapv]: map characteristics: [proj],[res] |
---|
604 | see full documentation: http://matplotlib.org/basemap/ |
---|
605 | [proj]: projection |
---|
606 | * 'cyl', cilindric |
---|
607 | * 'lcc', lamvbert conformal |
---|
608 | [res]: resolution: |
---|
609 | * 'c', crude |
---|
610 | * 'l', low |
---|
611 | * 'i', intermediate |
---|
612 | * 'h', high |
---|
613 | * 'f', full |
---|
614 | valules= 'rh,ta:z|-1,x|-1:z|-1,x|-1:lat:pressure:BuPu:fixsigc,black:%d:0.,100.:195.,305.,7:Meridonal|average|of|rh|&|ta:pdf:flip@y:time!hours!since!1949/12/01|exct,5d|%d|date!([DD]):None' |
---|
615 | varn= [varsn],[varcn] name of the variable to plot with shading variable with contour |
---|
616 | """ |
---|
617 | |
---|
618 | fname = 'draw_2D_shad_cont_time' |
---|
619 | if values == 'h': |
---|
620 | print fname + '_____________________________________________________________' |
---|
621 | print draw_2D_shad_cont_time.__doc__ |
---|
622 | quit() |
---|
623 | |
---|
624 | expectargs = ['[vnamefs]', '[dimvals]', '[dimvalc]', '[dimxvn]', '[dimyvn]', \ |
---|
625 | '[colorbar]', '[ckind]', '[clabfmt]', '[sminv],[smaxv]', \ |
---|
626 | '[sminc],[smaxv],[Nlev]', '[figt]', '[kindfig]', '[reverse]', '[timevals]', \ |
---|
627 | '[mapv]'] |
---|
628 | |
---|
629 | drw.check_arguments(fname,len(expectargs),values,':',expectargs) |
---|
630 | |
---|
631 | vnamesfig = values.split(':')[0].split(',') |
---|
632 | dimvals= values.split(':')[1].replace('|',':') |
---|
633 | dimvalc= values.split(':')[2].replace('|',':') |
---|
634 | vdimxn = values.split(':')[3] |
---|
635 | vdimyn = values.split(':')[4] |
---|
636 | colbarn = values.split(':')[5] |
---|
637 | countkind = values.split(':')[6] |
---|
638 | countlabelfmt = values.split(':')[7] |
---|
639 | shadminmax = values.split(':')[8] |
---|
640 | contlevels = values.split(':')[9] |
---|
641 | figtitle = values.split(':')[10].replace('|',' ') |
---|
642 | figkind = values.split(':')[11] |
---|
643 | revals = values.split(':')[12] |
---|
644 | timevals = values.split(':')[13] |
---|
645 | mapvalue = values.split(':')[14] |
---|
646 | |
---|
647 | if2filenames = ncfile.find(',') |
---|
648 | |
---|
649 | if if2filenames != -1: |
---|
650 | ncfiles = ncfile.split(',')[0] |
---|
651 | ncfilec = ncfile.split(',')[1] |
---|
652 | else: |
---|
653 | ncfiles = ncfile |
---|
654 | ncfilec = ncfile |
---|
655 | |
---|
656 | if not os.path.isfile(ncfiles): |
---|
657 | print errormsg |
---|
658 | print ' ' + fname + ': shading file "' + ncfiles + '" does not exist !!' |
---|
659 | quit(-1) |
---|
660 | |
---|
661 | if not os.path.isfile(ncfilec): |
---|
662 | print errormsg |
---|
663 | print ' ' + fname + ': contour file "' + ncfilec + '" does not exist !!' |
---|
664 | quit(-1) |
---|
665 | |
---|
666 | objsf = NetCDFFile(ncfiles, 'r') |
---|
667 | objcf = NetCDFFile(ncfilec, 'r') |
---|
668 | |
---|
669 | varns = varn.split(',')[0] |
---|
670 | varnc = varn.split(',')[1] |
---|
671 | |
---|
672 | if not objsf.variables.has_key(varns): |
---|
673 | print errormsg |
---|
674 | print ' ' + fname + ': shading file "' + ncfiles + \ |
---|
675 | '" does not have variable "' + varns + '" !!' |
---|
676 | quit(-1) |
---|
677 | |
---|
678 | if not objcf.variables.has_key(varnc): |
---|
679 | print errormsg |
---|
680 | print ' ' + fname + ': contour file "' + ncfilec + \ |
---|
681 | '" does not have variable "' + varnc + '" !!' |
---|
682 | quit(-1) |
---|
683 | |
---|
684 | # Variables' values |
---|
685 | objvars = objsf.variables[varns] |
---|
686 | objvarc = objcf.variables[varnc] |
---|
687 | |
---|
688 | if len(objvars.shape) != len(objvarc.shape): |
---|
689 | print errormsg |
---|
690 | print ' ' + fname + ': shading variable "' + varns + '" has a shape: ', \ |
---|
691 | objvars.shape, 'different than contour variable "' + varnc + '": ', \ |
---|
692 | objvarc.shape,' !!!' |
---|
693 | quit(-1) |
---|
694 | |
---|
695 | for idim in range(len(objvars.shape)): |
---|
696 | if objvars.shape[idim] != objvarc.shape[idim]: |
---|
697 | print errormsg |
---|
698 | print ' ' + fname + ': shading variable "' + varns + '" has a shape: ', \ |
---|
699 | objvars.shape, 'different than contour variable "' + varnc + '": ', \ |
---|
700 | objvarc.shape,' !!!' |
---|
701 | quit(-1) |
---|
702 | |
---|
703 | valshad, dimsshad = drw.slice_variable(objvars, dimvals.replace(',','|')) |
---|
704 | valcont, dimscont = drw.slice_variable(objvarc, dimvalc.replace(',','|')) |
---|
705 | |
---|
706 | # Dimensions names |
---|
707 | ## print fname + ' obj dimnames: ', objvars.dimensions, dimvals, len(dimvals.split(',')) |
---|
708 | ## dimnamesv = [] |
---|
709 | ## for idd in range(len(objvars.dimensions)): |
---|
710 | ## cutdim = False |
---|
711 | ## for idc in range(len(dimvals.split(','))): |
---|
712 | ## dimcutn = dimvals.split(',')[idc].split(':')[0] |
---|
713 | ## print objvars.dimensions[idd], dimcutn |
---|
714 | ## if objvars.dimensions[idd] == dimcutn: |
---|
715 | ## cutdim = True |
---|
716 | ## break |
---|
717 | ## if not cutdim: dimnamesv.append(objvars.dimensions[idd]) |
---|
718 | dimnamesv = [vdimyn, vdimxn] |
---|
719 | |
---|
720 | varunits = [] |
---|
721 | varunits.append(objvars.getncattr('units')) |
---|
722 | varunits.append(objvarc.getncattr('units')) |
---|
723 | |
---|
724 | if not objsf.variables.has_key(vdimxn): |
---|
725 | print errormsg |
---|
726 | print ' ' + fname + ': shading file "' + ncfiles + \ |
---|
727 | '" does not have dimension variable "' + vdimxn + '" !!' |
---|
728 | quit(-1) |
---|
729 | if not objsf.variables.has_key(vdimyn): |
---|
730 | print errormsg |
---|
731 | print ' ' + fname + ': shading file "' + ncfiles + \ |
---|
732 | '" does not have dimension variable "' + vdimyn + '" !!' |
---|
733 | quit(-1) |
---|
734 | |
---|
735 | timename = timevals.split('|')[0] |
---|
736 | timeunit = timevals.split('|')[1].replace('!',' ') |
---|
737 | timekind = timevals.split('|')[2] |
---|
738 | timefmt = timevals.split('|')[3] |
---|
739 | timelabel = timevals.split('|')[4].replace('!',' ') |
---|
740 | |
---|
741 | if vdimxn == timename: |
---|
742 | timevals = objsf.variables[vdimxn][:] |
---|
743 | dimt = 'x' |
---|
744 | ovalaxis = objsf.variables[vdimyn] |
---|
745 | ovalu = ovalaxis.getncattr('units') |
---|
746 | elif vdimyn == timename: |
---|
747 | timevals = objsf.variables[vdimyn][:] |
---|
748 | dimt = 'y' |
---|
749 | ovalaxis = objsf.variables[vdimxn] |
---|
750 | ovalu = ovalaxis.getncattr('units') |
---|
751 | else: |
---|
752 | print errormsg |
---|
753 | print ' ' + fname + ": time variable '" + timename + "' not found!!" |
---|
754 | quit(-1) |
---|
755 | |
---|
756 | timepos, timelabels = drw.CFtimes_plot(timevals, timeunit, timekind, timefmt) |
---|
757 | |
---|
758 | if len(ovalaxis.shape) <= 2: |
---|
759 | ovalaxisv = ovalaxis[:] |
---|
760 | |
---|
761 | elif len(ovalaxis.shape) == 3: |
---|
762 | ovalaxisv = ovalaxis[0,:] |
---|
763 | else: |
---|
764 | print errormsg |
---|
765 | print ' ' + fname + ': shape of dimension variable:', ovalaxis.shape, \ |
---|
766 | ' not ready!!' |
---|
767 | quit(-1) |
---|
768 | |
---|
769 | if countlabelfmt == 'None': |
---|
770 | countlfmt = None |
---|
771 | else: |
---|
772 | countlfmt = countlabelfmt |
---|
773 | |
---|
774 | shading_nx = np.zeros((2), dtype=np.float) |
---|
775 | shading_nx[0] = np.float(shadminmax.split(',')[0]) |
---|
776 | shading_nx[1] = np.float(shadminmax.split(',')[1]) |
---|
777 | |
---|
778 | clevmin = np.float(contlevels.split(',')[0]) |
---|
779 | clevmax = np.float(contlevels.split(',')[1]) |
---|
780 | Nclevels = int(contlevels.split(',')[2]) |
---|
781 | |
---|
782 | levels_cont = drw.pretty_int(clevmin, clevmax, Nclevels) |
---|
783 | |
---|
784 | if len(levels_cont) <= 1: |
---|
785 | print warnmsg |
---|
786 | print ' ' + fname + ': wrong contour levels:', levels_cont,' !!' |
---|
787 | del(levels_cont) |
---|
788 | levels_cont = np.zeros((Nclevels), dtype=np.float) |
---|
789 | levels_cont = np.arange(7)*(clevmax - clevmin)/(Nclevels-1) |
---|
790 | print ' generating default ones: ',levels_cont |
---|
791 | |
---|
792 | if mapvalue == 'None': mapvalue = None |
---|
793 | |
---|
794 | drw.plot_2D_shadow_contour_time(valshad, valcont, vnamesfig, ovalaxisv, \ |
---|
795 | timevals, timepos, timelabels, ovalu, timelabel, dimt, dimnamesv, colbarn, \ |
---|
796 | countkind, countlfmt, shading_nx, levels_cont, varunits, figtitle, figkind, \ |
---|
797 | revals, mapvalue) |
---|
798 | |
---|
799 | return |
---|
800 | |
---|
801 | def draw_2D_shad_line(ncfile, values, varn): |
---|
802 | """ plotting a fields with shading and another with line |
---|
803 | draw_2D_shad_line(ncfile, values, varn) |
---|
804 | ncfile= [ncfiles],[ncfilel] file to use for the shading and for the line |
---|
805 | values=[vnamefs],[vnamefl]:[dimvals]:[dimxvn]:[dimyvn]:[colorbar],[colline]:[sminv],[smaxv]:[figt]: |
---|
806 | [kindfig]:[reverse]:[mapv]:[close] |
---|
807 | [vnamefs]: Name in the figure of the variable to be shaded |
---|
808 | [vnamefl]: Name in the figure of the variable to be lined |
---|
809 | [dimvals]: ',' list of [dimname]|[value] telling at which dimension of the |
---|
810 | variable a given value is required (-1, all the length) |
---|
811 | [dimx/yvn]: name of the variables with the values of the final dimensions (x,y) |
---|
812 | [colorbar]: name of the color bar |
---|
813 | [colline]: name of the color for the line |
---|
814 | [smin/axv]: minimum and maximum value for the shading |
---|
815 | [figt]: title of the figure ('|' for spaces) |
---|
816 | [kindfig]: kind of figure |
---|
817 | [reverse]: Transformation of the values |
---|
818 | * 'transpose': reverse the axes (x-->y, y-->x) |
---|
819 | * 'flip'@[x/y]: flip the axis x or y |
---|
820 | [mapv]: map characteristics: [proj],[res] |
---|
821 | see full documentation: http://matplotlib.org/basemap/ |
---|
822 | [proj]: projection |
---|
823 | * 'cyl', cilindric |
---|
824 | * 'lcc', lamvbert conformal |
---|
825 | [res]: resolution: |
---|
826 | * 'c', crude |
---|
827 | * 'l', low |
---|
828 | * 'i', intermediate |
---|
829 | * 'h', high |
---|
830 | * 'f', full |
---|
831 | valules= 'rh:z|-1,x|-1:z|-1,x|-1:lat:pressure:BuPu:0.,100.:rh:pdf:flip@y:None' |
---|
832 | varn= [varsn],[varnl] name of the variable to plot with shading and with line |
---|
833 | """ |
---|
834 | |
---|
835 | fname = 'draw_2D_shad_line' |
---|
836 | if values == 'h': |
---|
837 | print fname + '_____________________________________________________________' |
---|
838 | print draw_2D_shad_line.__doc__ |
---|
839 | quit() |
---|
840 | |
---|
841 | farguments = ['[vnamefs],[vnamefl]', '[dimvals]', '[dimxvn]', '[dimyvn]', \ |
---|
842 | '[colorbar],[colline]', '[sminv],[smaxv]', '[figt]', '[kindfig]', '[reverse]', \ |
---|
843 | '[mapv]', '[close]'] |
---|
844 | drw.check_arguments(fname,11,values,':',farguments) |
---|
845 | |
---|
846 | vnamesfig = values.split(':')[0].split(',')[0] |
---|
847 | dimvals= values.split(':')[1].replace('|',':') |
---|
848 | vdimxn = values.split(':')[2] |
---|
849 | vdimyn = values.split(':')[3] |
---|
850 | colbarn = values.split(':')[4].split(',')[0] |
---|
851 | shadminmax = values.split(':')[5] |
---|
852 | figtitle = values.split(':')[6].replace('|',' ') |
---|
853 | figkind = values.split(':')[7] |
---|
854 | revals = values.split(':')[8] |
---|
855 | mapvalue = values.split(':')[9] |
---|
856 | # varn = values.split(':')[10] |
---|
857 | |
---|
858 | ncfiles = ncfile.split(',')[0] |
---|
859 | |
---|
860 | if not os.path.isfile(ncfiles): |
---|
861 | print errormsg |
---|
862 | print ' ' + fname + ': shading file "' + ncfiles + '" does not exist !!' |
---|
863 | quit(-1) |
---|
864 | |
---|
865 | objsf = NetCDFFile(ncfiles, 'r') |
---|
866 | |
---|
867 | varns = varn.split(',')[0] |
---|
868 | |
---|
869 | if not objsf.variables.has_key(varns): |
---|
870 | print errormsg |
---|
871 | print ' ' + fname + ': shading file "' + ncfiles + \ |
---|
872 | '" does not have variable "' + varns + '" !!' |
---|
873 | quit(-1) |
---|
874 | |
---|
875 | # Variables' values |
---|
876 | objvars = objsf.variables[varns] |
---|
877 | |
---|
878 | valshad, dimsshad = drw.slice_variable(objvars, dimvals.replace(',','|')) |
---|
879 | |
---|
880 | # Dimensions names |
---|
881 | ## print fname + ' obj dimnames: ', objvars.dimensions, dimvals, len(dimvals.split(',')) |
---|
882 | ## dimnamesv = [] |
---|
883 | ## for idd in range(len(objvars.dimensions)): |
---|
884 | ## cutdim = False |
---|
885 | ## for idc in range(len(dimvals.split(','))): |
---|
886 | ## dimcutn = dimvals.split(',')[idc].split(':')[0] |
---|
887 | ## print objvars.dimensions[idd], dimcutn |
---|
888 | ## if objvars.dimensions[idd] == dimcutn: |
---|
889 | ## cutdim = True |
---|
890 | ## break |
---|
891 | ## if not cutdim: dimnamesv.append(objvars.dimensions[idd]) |
---|
892 | dimnamesv = [vdimyn, vdimxn] |
---|
893 | |
---|
894 | varunits = objvars.getncattr('units') |
---|
895 | |
---|
896 | if not objsf.variables.has_key(vdimxn): |
---|
897 | print errormsg |
---|
898 | print ' ' + fname + ': shading file "' + ncfiles + \ |
---|
899 | '" does not have dimension variable "' + vdimxn + '" !!' |
---|
900 | quit(-1) |
---|
901 | if not objsf.variables.has_key(vdimyn): |
---|
902 | print errormsg |
---|
903 | print ' ' + fname + ': shading file "' + ncfiles + \ |
---|
904 | '" does not have dimensino variable "' + vdimyn + '" !!' |
---|
905 | quit(-1) |
---|
906 | |
---|
907 | objdimx = objsf.variables[vdimxn] |
---|
908 | objdimy = objsf.variables[vdimyn] |
---|
909 | odimxu = objdimx.getncattr('units') |
---|
910 | odimyu = objdimy.getncattr('units') |
---|
911 | |
---|
912 | if len(objdimx.shape) <= 2: |
---|
913 | # odimxv = objdimx[valshad.shape] |
---|
914 | # odimyv = objdimy[valshad.shape] |
---|
915 | odimxv = objdimx[:] |
---|
916 | odimyv = objdimy[:] |
---|
917 | |
---|
918 | elif len(objdimx.shape) == 3: |
---|
919 | # dimcut = [0, slice(0,valshad.shape[0]), slice(0,valshad.shape[1])] |
---|
920 | # odimxv = objdimx[tuple(dimcut)] |
---|
921 | # odimyv = objdimy[tuple(dimcut)] |
---|
922 | odimxv = objdimx[0,:] |
---|
923 | odimyv = objdimy[0,:] |
---|
924 | else: |
---|
925 | print errormsg |
---|
926 | print ' ' + fname + ': shape of dimension variable:', objdimx.shape, \ |
---|
927 | ' not ready!!' |
---|
928 | quit(-1) |
---|
929 | |
---|
930 | shading_nx = np.zeros((2), dtype=np.float) |
---|
931 | shading_nx[0] = np.float(shadminmax.split(',')[0]) |
---|
932 | shading_nx[1] = np.float(shadminmax.split(',')[1]) |
---|
933 | |
---|
934 | if mapvalue == 'None': mapvalue = None |
---|
935 | |
---|
936 | # line plot |
---|
937 | ## |
---|
938 | ncfilel = ncfile.split(',')[1] |
---|
939 | vnamelfig = values.split(':')[0].split(',')[1] |
---|
940 | varnl = varn.split(',')[1] |
---|
941 | colline = values.split(':')[4].split(',')[1] |
---|
942 | |
---|
943 | objlf = NetCDFFile(ncfilel,'r') |
---|
944 | objlvar = objlf.variables[varnl] |
---|
945 | |
---|
946 | linevals = objlvar[:] |
---|
947 | varlunits = objlvar.units |
---|
948 | |
---|
949 | drw.plot_2D_shadow_line(valshad, linevals, vnamesfig, vnamelfig, odimxv, odimyv, \ |
---|
950 | odimxu, odimyu, dimnamesv, colbarn, colline, shading_nx, varunits, varlunits, \ |
---|
951 | figtitle, figkind, revals, mapvalue, True) |
---|
952 | |
---|
953 | objsf.close() |
---|
954 | objlf.close() |
---|
955 | |
---|
956 | return |
---|
957 | |
---|
958 | def draw_2D_shad_line_time(ncfile, values, varn): |
---|
959 | """ plotting a fields with shading and a line with time values |
---|
960 | draw_2D_shad_line(ncfile, values, varn) |
---|
961 | ncfile= [ncfiles],[ncfilel] files to use to draw with shading and the line |
---|
962 | values= [vnamefs],[vanemefl]:[dimvals]:[dimxvn]:[dimyvn]:[colorbar]:[sminv],[smaxv]:[figt]: |
---|
963 | [kindfig]:[reverse]:[timevals]:[close] |
---|
964 | [vnamefs]: Name in the figure of the variable to be shaded |
---|
965 | [vnamefl]: Name in the figure of the variable to be lined |
---|
966 | [dimvals]: ',' list of [dimname]|[value] telling at which dimension of the |
---|
967 | variable a given value is required (-1, all the length) |
---|
968 | [dimx/yvn]: name of the variables with the values of the final dimensions (x,y) |
---|
969 | [colorbar]: name of the color bar |
---|
970 | [smin/axv]: minimum and maximum value for the shading |
---|
971 | [figt]: title of the figure ('|' for spaces) |
---|
972 | [kindfig]: kind of figure |
---|
973 | [reverse]: Transformation of the values |
---|
974 | * 'transpose': reverse the axes (x-->y, y-->x) |
---|
975 | * 'flip'@[x/y]: flip the axis x or y |
---|
976 | [timevals]: [timen]|[units]|[kind]|[tfmt]|[label]|[timeaxis] time labels characteristics |
---|
977 | [timen]; name of the time variable |
---|
978 | [units]; units string according to CF conventions ([tunits] since |
---|
979 | [YYYY]-[MM]-[DD] [[HH]:[MI]:[SS]], '!' for spaces) |
---|
980 | [kind]; kind of output |
---|
981 | 'Nval': according to a given number of values as 'Nval',[Nval] |
---|
982 | 'exct': according to an exact time unit as 'exct',[tunit]; |
---|
983 | tunit= [Nunits],[tu]; [tu]= 'c': centuries, 'y': year, 'm': month, |
---|
984 | 'w': week, 'd': day, 'h': hour, 'i': minute, 's': second, |
---|
985 | 'l': milisecond |
---|
986 | [tfmt]; desired format |
---|
987 | [label]; label at the graph ('!' for spaces) |
---|
988 | [close]: should figure be closed (finished) |
---|
989 | values='dtcon,prc:Time|-1,bottom_top|-1:presmean:time:seismic:-3.e-6,3.e-6:monthly|' |
---|
990 | 'dtcon:pdf:transpose:time|hours!since!1949-12-01|exct,2,d|%d|date!([DD])|x:True |
---|
991 | varn= [varsn].[varln] name of the variable to plot with shading and to plot with line |
---|
992 | """ |
---|
993 | fname = 'draw_2D_shad_line_time' |
---|
994 | if values == 'h': |
---|
995 | print fname + '_____________________________________________________________' |
---|
996 | print draw_2D_shad__line_time.__doc__ |
---|
997 | quit() |
---|
998 | |
---|
999 | farguments = ['[vnamefs],[vanemefl]', '[dimvals]', '[dimxvn]', '[dimyvn]', \ |
---|
1000 | '[colorbar]', '[sminv],[smaxv]', '[figt]', '[kindfig]', '[reverse]', \ |
---|
1001 | '[timevals]', '[close]'] |
---|
1002 | drw.check_arguments(fname,11,values,':',farguments) |
---|
1003 | |
---|
1004 | vnamesfig = values.split(':')[0].split(',')[0] |
---|
1005 | dimvals= values.split(':')[1].replace('|',':') |
---|
1006 | vdimxn = values.split(':')[2] |
---|
1007 | vdimyn = values.split(':')[3] |
---|
1008 | colbarn = values.split(':')[4] |
---|
1009 | shadminmax = values.split(':')[5] |
---|
1010 | figtitle = values.split(':')[6].replace('|',' ') |
---|
1011 | figkind = values.split(':')[7] |
---|
1012 | revals = values.split(':')[8] |
---|
1013 | timevals = values.split(':')[9] |
---|
1014 | close = values.split(':')[10] |
---|
1015 | |
---|
1016 | ncfiles = ncfile.split(',')[0] |
---|
1017 | |
---|
1018 | if not os.path.isfile(ncfiles): |
---|
1019 | print errormsg |
---|
1020 | print ' ' + fname + ': shading file "' + ncfiles + '" does not exist !!' |
---|
1021 | quit(-1) |
---|
1022 | |
---|
1023 | objsf = NetCDFFile(ncfiles, 'r') |
---|
1024 | |
---|
1025 | varns = varn.split(',')[0] |
---|
1026 | |
---|
1027 | if not objsf.variables.has_key(varns): |
---|
1028 | print errormsg |
---|
1029 | print ' ' + fname + ': shading file "' + ncfiles + \ |
---|
1030 | '" does not have variable "' + varns + '" !!' |
---|
1031 | quit(-1) |
---|
1032 | |
---|
1033 | # Variables' values |
---|
1034 | objvars = objsf.variables[varns] |
---|
1035 | |
---|
1036 | valshad, dimsshad = drw.slice_variable(objvars, dimvals.replace(',','|')) |
---|
1037 | |
---|
1038 | dimnamesv = [vdimyn, vdimxn] |
---|
1039 | |
---|
1040 | varunits = objvars.getncattr('units') |
---|
1041 | |
---|
1042 | if not objsf.variables.has_key(vdimxn): |
---|
1043 | print errormsg |
---|
1044 | print ' ' + fname + ': shading file "' + ncfiles + \ |
---|
1045 | '" does not have dimension variable "' + vdimxn + '" !!' |
---|
1046 | quit(-1) |
---|
1047 | if not objsf.variables.has_key(vdimyn): |
---|
1048 | print errormsg |
---|
1049 | print ' ' + fname + ': shading file "' + ncfiles + \ |
---|
1050 | '" does not have dimensino variable "' + vdimyn + '" !!' |
---|
1051 | quit(-1) |
---|
1052 | |
---|
1053 | objdimx = objsf.variables[vdimxn] |
---|
1054 | objdimy = objsf.variables[vdimyn] |
---|
1055 | odimxu = objdimx.getncattr('units') |
---|
1056 | odimyu = objdimy.getncattr('units') |
---|
1057 | |
---|
1058 | if len(objdimx.shape) <= 2: |
---|
1059 | odimxv = objdimx[:] |
---|
1060 | odimyv = objdimy[:] |
---|
1061 | |
---|
1062 | elif len(objdimx.shape) == 3: |
---|
1063 | odimxv = objdimx[0,:] |
---|
1064 | odimyv = objdimy[0,:] |
---|
1065 | else: |
---|
1066 | print errormsg |
---|
1067 | print ' ' + fname + ': shape of dimension variable:', objdimx.shape, \ |
---|
1068 | ' not ready!!' |
---|
1069 | quit(-1) |
---|
1070 | |
---|
1071 | timename = timevals.split('|')[0] |
---|
1072 | timeunit = timevals.split('|')[1].replace('!',' ') |
---|
1073 | timekind = timevals.split('|')[2] |
---|
1074 | timefmt = timevals.split('|')[3] |
---|
1075 | timelabel = timevals.split('|')[4].replace('!',' ') |
---|
1076 | |
---|
1077 | if vdimxn == timename: |
---|
1078 | odimxv = objsf.variables[vdimxn][:] |
---|
1079 | odimxu = timelabel |
---|
1080 | timeaxis = 'x' |
---|
1081 | odimyv = objsf.variables[vdimyn] |
---|
1082 | odimyu = odimyv.getncattr('units') |
---|
1083 | timepos, timelabels = drw.CFtimes_plot(odimxv, timeunit, timekind, timefmt) |
---|
1084 | elif vdimyn == timename: |
---|
1085 | odimyv = objsf.variables[vdimyn][:] |
---|
1086 | odimyu = timelabel |
---|
1087 | timeaxis = 'y' |
---|
1088 | odimxv = objsf.variables[vdimxn] |
---|
1089 | odimxu = odimxv.getncattr('units') |
---|
1090 | timepos, timelabels = drw.CFtimes_plot(odimyv, timeunit, timekind, timefmt) |
---|
1091 | else: |
---|
1092 | print errormsg |
---|
1093 | print ' ' + fname + ": time variable '" + timename + "' not found!!" |
---|
1094 | quit(-1) |
---|
1095 | |
---|
1096 | shading_nx = np.zeros((2), dtype=np.float) |
---|
1097 | shading_nx[0] = np.float(shadminmax.split(',')[0]) |
---|
1098 | shading_nx[1] = np.float(shadminmax.split(',')[1]) |
---|
1099 | |
---|
1100 | closeval = drw.Str_Bool(close) |
---|
1101 | |
---|
1102 | drw.plot_2D_shadow_time(valshad, vnamesfig, odimxv, odimyv, odimxu, odimyu, \ |
---|
1103 | dimnamesv, colbarn, shading_nx, varunits, figtitle, figkind, revals, timeaxis, \ |
---|
1104 | timepos, timelabels, False) |
---|
1105 | |
---|
1106 | # Line values |
---|
1107 | ## |
---|
1108 | ncfilel = ncfile.split(',')[1] |
---|
1109 | |
---|
1110 | vnamelfig = values.split(':')[0].split(',')[1] |
---|
1111 | varnl = varn.split(',')[1] |
---|
1112 | |
---|
1113 | objlf = NetCDFFile(ncfilel,'r') |
---|
1114 | objlvar = objlf.variables[varnl] |
---|
1115 | |
---|
1116 | linevals = objlvar[:] |
---|
1117 | if reva0 == 'tranpose': |
---|
1118 | plt.plot (linevals, odimxv, '-', color='k') |
---|
1119 | else: |
---|
1120 | plt.plot (odimxv, linevals, '-', color='k') |
---|
1121 | |
---|
1122 | objsf.close() |
---|
1123 | objsl.close() |
---|
1124 | |
---|
1125 | return |
---|
1126 | |
---|
1127 | def draw_topo_geogrid(ncfile, values): |
---|
1128 | """ plotting geo_em.d[nn].nc topography from WPS files |
---|
1129 | draw_topo_geogrid(ncfile, values) |
---|
1130 | ncfile= geo_em.d[nn].nc file to use |
---|
1131 | values= [minTopo],[maxTopo]:[lonlatL]:[title]:[graphic_kind]:[mapvalues] |
---|
1132 | [min/max]Topo: minimum and maximum values of topography to draw |
---|
1133 | lonlatL: limits of longitudes and latitudes [lonmin, latmin, lonmax, latmax] or None |
---|
1134 | title: title of the graph |
---|
1135 | graphic_kind: kind of figure (jpg, pdf, png) |
---|
1136 | mapvalues: map characteristics [proj],[res] |
---|
1137 | see full documentation: http://matplotlib.org/basemap/ |
---|
1138 | [proj]: projection |
---|
1139 | * 'cyl', cilindric |
---|
1140 | * 'lcc', lambert conformal |
---|
1141 | [res]: resolution: |
---|
1142 | * 'c', crude |
---|
1143 | * 'l', low |
---|
1144 | * 'i', intermediate |
---|
1145 | * 'h', high |
---|
1146 | * 'f', full |
---|
1147 | """ |
---|
1148 | fname = 'draw_topo_geogrid' |
---|
1149 | |
---|
1150 | if values == 'h': |
---|
1151 | print fname + '_____________________________________________________________' |
---|
1152 | print draw_topo_geogrid.__doc__ |
---|
1153 | quit() |
---|
1154 | |
---|
1155 | expectargs = ['[minTopo]','[maxTopo]', '[lonlatL]', '[title]', '[graphic_kind]', \ |
---|
1156 | '[mapvalues]'] |
---|
1157 | |
---|
1158 | drw.check_arguments(fname,5,values,':',expectargs) |
---|
1159 | |
---|
1160 | mintopo = values.split(':')[0].split(',')[0] |
---|
1161 | maxtopo = values.split(':')[0].split(',')[1] |
---|
1162 | |
---|
1163 | lonlatLS = values.split(':')[1] |
---|
1164 | lonlatLv = lonlatLS.split(',')[0] |
---|
1165 | |
---|
1166 | if lonlatLv == 'None': |
---|
1167 | lonlatL = None |
---|
1168 | else: |
---|
1169 | lonlatL = np.zeros((4), dtype=np.float) |
---|
1170 | lonlatL[0] = np.float(lonlatLS.split(',')[0]) |
---|
1171 | lonlatL[1] = np.float(lonlatLS.split(',')[1]) |
---|
1172 | lonlatL[2] = np.float(lonlatLS.split(',')[2]) |
---|
1173 | lonlatL[3] = np.float(lonlatLS.split(',')[3]) |
---|
1174 | |
---|
1175 | grtit = values.split(':')[2] |
---|
1176 | kindfig = values.split(':')[3] |
---|
1177 | mapvalues = values.split(':')[4] |
---|
1178 | |
---|
1179 | if not os.path.isfile(ncfile): |
---|
1180 | print errormsg |
---|
1181 | print ' ' + fname + ': domain file "' + ncfile + '" does not exist !!' |
---|
1182 | quit(-1) |
---|
1183 | |
---|
1184 | objdomf = NetCDFFile(ncfile, 'r') |
---|
1185 | |
---|
1186 | objhgt = objdomf.variables['HGT_M'] |
---|
1187 | objlon = objdomf.variables['XLONG_M'] |
---|
1188 | objlat = objdomf.variables['XLAT_M'] |
---|
1189 | |
---|
1190 | topography = objhgt[0,:,:] |
---|
1191 | |
---|
1192 | drw.plot_topo_geogrid(topography, objlon, objlat, mintopo, maxtopo, lonlatL, \ |
---|
1193 | grtit, kindfig, mapvalues, True) |
---|
1194 | |
---|
1195 | objdomf.close() |
---|
1196 | |
---|
1197 | return |
---|
1198 | |
---|
1199 | def draw_topo_geogrid_boxes(ncfiles, values): |
---|
1200 | """ plotting different geo_em.d[nn].nc topography from WPS files |
---|
1201 | draw_topo_geogrid_boxes(ncfile, values) |
---|
1202 | ncfiles= ',' list of geo_em.d[nn].nc files to use (fisrt as topographyc reference) |
---|
1203 | values= [minTopo],[maxTopo]:[lonlatL]:[title]:[graphic_kind]:[mapvalues]:[labels] |
---|
1204 | [min/max]Topo: minimum and maximum values of topography to draw |
---|
1205 | lonlatL: limits of longitudes and latitudes [lonmin, latmin, lonmax, latmax] or None |
---|
1206 | title: title of the graph |
---|
1207 | graphic_kind: kind of figure (jpg, pdf, png) |
---|
1208 | mapvalues: map characteristics [proj],[res] |
---|
1209 | see full documentation: http://matplotlib.org/basemap/ |
---|
1210 | [proj]: projection |
---|
1211 | * 'cyl', cilindric |
---|
1212 | * 'lcc', lambert conformal |
---|
1213 | [res]: resolution: |
---|
1214 | * 'c', crude |
---|
1215 | * 'l', low |
---|
1216 | * 'i', intermediate |
---|
1217 | * 'h', high |
---|
1218 | * 'f', full |
---|
1219 | labels= labels to write in the graph |
---|
1220 | """ |
---|
1221 | # import matplotlib as mpl |
---|
1222 | # mpl.use('Agg') |
---|
1223 | import matplotlib.pyplot as plt |
---|
1224 | |
---|
1225 | fname = 'draw_topo_geogrid_boxes' |
---|
1226 | |
---|
1227 | if values == 'h': |
---|
1228 | print fname + '_____________________________________________________________' |
---|
1229 | print draw_topo_geogrid_boxes.__doc__ |
---|
1230 | quit() |
---|
1231 | |
---|
1232 | mintopo = values.split(':')[0].split(',')[0] |
---|
1233 | maxtopo = values.split(':')[0].split(',')[1] |
---|
1234 | |
---|
1235 | lonlatLS = values.split(':')[1] |
---|
1236 | lonlatLv = lonlatLS.split(',')[0] |
---|
1237 | |
---|
1238 | if lonlatLv == 'None': |
---|
1239 | lonlatL = None |
---|
1240 | else: |
---|
1241 | lonlatL = np.zeros((4), dtype=np.float) |
---|
1242 | lonlatL[0] = np.float(lonlatLS.split(',')[0]) |
---|
1243 | lonlatL[1] = np.float(lonlatLS.split(',')[1]) |
---|
1244 | lonlatL[2] = np.float(lonlatLS.split(',')[2]) |
---|
1245 | lonlatL[3] = np.float(lonlatLS.split(',')[3]) |
---|
1246 | |
---|
1247 | grtit = values.split(':')[2] |
---|
1248 | kindfig = values.split(':')[3] |
---|
1249 | mapvalues = values.split(':')[4] |
---|
1250 | labels = values.split(':')[5] |
---|
1251 | |
---|
1252 | ncfile = ncfiles.split(',')[0] |
---|
1253 | if not os.path.isfile(ncfile): |
---|
1254 | print errormsg |
---|
1255 | print ' ' + fname + ': domain file "' + ncfile + '" does not exist !!' |
---|
1256 | quit(-1) |
---|
1257 | |
---|
1258 | objdomf = NetCDFFile(ncfile, 'r') |
---|
1259 | |
---|
1260 | objhgt = objdomf.variables['HGT_M'] |
---|
1261 | objlon0 = objdomf.variables['XLONG_M'] |
---|
1262 | objlat0 = objdomf.variables['XLAT_M'] |
---|
1263 | |
---|
1264 | topography = objhgt[0,:,:] |
---|
1265 | |
---|
1266 | Nfiles = len(ncfiles.split(',')) |
---|
1267 | boxlabels = labels.split(',') |
---|
1268 | |
---|
1269 | Xboxlines = [] |
---|
1270 | Yboxlines = [] |
---|
1271 | |
---|
1272 | for ifile in range(Nfiles): |
---|
1273 | ncfile = ncfiles.split(',')[ifile] |
---|
1274 | # print ifile, ncfile |
---|
1275 | if not os.path.isfile(ncfile): |
---|
1276 | print errormsg |
---|
1277 | print ' ' + fname + ': domain file "' + ncfile + '" does not exist !!' |
---|
1278 | quit(-1) |
---|
1279 | |
---|
1280 | objdomfi = NetCDFFile(ncfile, 'r') |
---|
1281 | |
---|
1282 | objlon = objdomfi.variables['XLONG_M'] |
---|
1283 | objlat = objdomfi.variables['XLAT_M'] |
---|
1284 | |
---|
1285 | dx = objlon.shape[2] |
---|
1286 | dy = objlon.shape[1] |
---|
1287 | |
---|
1288 | Xboxlines.append(objlon[0,0,:]) |
---|
1289 | Yboxlines.append(objlat[0,0,:]) |
---|
1290 | Xboxlines.append(objlon[0,dy-1,:]) |
---|
1291 | Yboxlines.append(objlat[0,dy-1,:]) |
---|
1292 | Xboxlines.append(objlon[0,:,0]) |
---|
1293 | Yboxlines.append(objlat[0,:,0]) |
---|
1294 | Xboxlines.append(objlon[0,:,dx-1]) |
---|
1295 | Yboxlines.append(objlat[0,:,dx-1]) |
---|
1296 | |
---|
1297 | objdomfi.close() |
---|
1298 | |
---|
1299 | drw.plot_topo_geogrid_boxes(topography, Xboxlines, Yboxlines, boxlabels, \ |
---|
1300 | objlon0, objlat0, mintopo, maxtopo, lonlatL, grtit, kindfig, mapvalues, True) |
---|
1301 | |
---|
1302 | objdomf.close() |
---|
1303 | |
---|
1304 | return |
---|
1305 | |
---|
1306 | def movievalslice(origslice, dimmovien, framenum): |
---|
1307 | """ Function to provide variable slice according to a geneation of a movie |
---|
1308 | movievals(origslice, dimmovien, framenum) |
---|
1309 | [origslice]= slice original as [dimname1]|[val1],[...,[dimnameN]|[valN]] |
---|
1310 | ([val] = -1, full length) |
---|
1311 | [dimmovien]= name of the dimension to produce the movie |
---|
1312 | [framenum]= value of the frame to substitue in [origslice] as |
---|
1313 | [dimmovien]|[framenum] |
---|
1314 | >>> movievalslice('East_West|-1,North_South|-1,Time|2','Time',0) |
---|
1315 | East_West|-1,North_South|-1,Time|0 |
---|
1316 | """ |
---|
1317 | |
---|
1318 | fname = 'movievalslice' |
---|
1319 | |
---|
1320 | if origslice == 'h': |
---|
1321 | print fname + '_____________________________________________________________' |
---|
1322 | print movievalslice.__doc__ |
---|
1323 | quit() |
---|
1324 | |
---|
1325 | dims = origslice.split(',') |
---|
1326 | |
---|
1327 | movieslice = '' |
---|
1328 | idim = 0 |
---|
1329 | |
---|
1330 | for dimn in dims: |
---|
1331 | dn = dimn.split('|')[0] |
---|
1332 | if dn == dimmovien: |
---|
1333 | movieslice = movieslice + dn + '|' + str(framenum) |
---|
1334 | else: |
---|
1335 | movieslice = movieslice + dimn |
---|
1336 | if idim < len(dims)-1: movieslice = movieslice + ',' |
---|
1337 | |
---|
1338 | idim = idim + 1 |
---|
1339 | |
---|
1340 | return movieslice |
---|
1341 | |
---|
1342 | class Capturing(list): |
---|
1343 | """ Class to capture function output as a list |
---|
1344 | from: http://stackoverflow.com/questions/16571150/how-to-capture-stdout-output-from-a-python-function-call |
---|
1345 | """ |
---|
1346 | # from cStringIO import StringIO |
---|
1347 | |
---|
1348 | def __enter__(self): |
---|
1349 | self._stdout = sys.stdout |
---|
1350 | sys.stdout = self._stringio = StringIO() |
---|
1351 | return self |
---|
1352 | def __exit__(self, *args): |
---|
1353 | self.extend(self._stringio.getvalue().splitlines()) |
---|
1354 | sys.stdout = self._stdout |
---|
1355 | |
---|
1356 | def create_movie(netcdfile, values, variable): |
---|
1357 | """ Function to create a movie assuming ImageMagick installed! |
---|
1358 | values= [graph]#[movie_dimension]#[graph_values] |
---|
1359 | [graph]: which graphic |
---|
1360 | [movie_dimension]: [dimnmovie]@[dimvmovie]@[moviedelay]@[interval] |
---|
1361 | [dimnmovie]; name of the dimension from which make the movie |
---|
1362 | [dimvmovie]; name of the variable with the values of the dimension |
---|
1363 | [moviedelay]; delay between frames |
---|
1364 | [interval]; [beg]@[end]@[freq] or -1 (all) |
---|
1365 | [graph_values]: values to generate the graphic |
---|
1366 | netcdfile= netCDF file |
---|
1367 | variable= variable to use (when applicable) |
---|
1368 | """ |
---|
1369 | fname = 'create_movie' |
---|
1370 | |
---|
1371 | if values == 'h': |
---|
1372 | print fname + '_____________________________________________________________' |
---|
1373 | print create_movie.__doc__ |
---|
1374 | quit() |
---|
1375 | |
---|
1376 | graph = values.split('#')[0] |
---|
1377 | movie_dim = values.split('#')[1] |
---|
1378 | graph_vals = values.split('#')[2] |
---|
1379 | |
---|
1380 | ncobj = NetCDFFile(netcdfile, 'r') |
---|
1381 | |
---|
1382 | # Movie dimension |
---|
1383 | ## |
---|
1384 | dimnmovie = movie_dim.split('@')[0] |
---|
1385 | dimvmovie = movie_dim.split('@')[1] |
---|
1386 | moviedelay = movie_dim.split('@')[2] |
---|
1387 | moviebeg = int(movie_dim.split('@')[3]) |
---|
1388 | |
---|
1389 | if not drw.searchInlist(ncobj.dimensions.keys(),dimnmovie): |
---|
1390 | print errormsg |
---|
1391 | print ' ' + fname + ": file '" + netcdfile + "' has not dimension '" + \ |
---|
1392 | dimnmovie + "' !!!" |
---|
1393 | quit(-1) |
---|
1394 | |
---|
1395 | objdmovie = ncobj.dimensions[dimnmovie] |
---|
1396 | dmovie = len(objdmovie) |
---|
1397 | if moviebeg != -1: |
---|
1398 | moviend = int(movie_dim.split('@')[4]) |
---|
1399 | moviefreq = int(movie_dim.split('@')[5]) |
---|
1400 | else: |
---|
1401 | moviebeg = 0 |
---|
1402 | moviend = dmovie |
---|
1403 | moviefreq = 1 |
---|
1404 | |
---|
1405 | if dimvmovie == 'WRFTimes': |
---|
1406 | objvdmovie = ncobj.variables['Times'] |
---|
1407 | vdmovieunits = '' |
---|
1408 | valsdmovie = [] |
---|
1409 | for it in range(objvdmovie.shape[0]): |
---|
1410 | valsdmovie.append(drw.datetimeStr_conversion(objvdmovie[it,:], \ |
---|
1411 | 'WRFdatetime', 'Y/m/d H-M-S')) |
---|
1412 | elif dimvmovie == 'CFtime': |
---|
1413 | objvdmovie = ncobj.variables['time'] |
---|
1414 | vdmovieunits = '' |
---|
1415 | print objvdmovie.units |
---|
1416 | valsdmovie0 = drw.netCDFdatetime_realdatetime(objvdmovie.units, 'standard', \ |
---|
1417 | objvdmovie[:]) |
---|
1418 | valsdmovie = [] |
---|
1419 | for it in range(objvdmovie.shape[0]): |
---|
1420 | valsdmovie.append(drw.datetimeStr_conversion(valsdmovie0[it,:], \ |
---|
1421 | 'matYmdHMS', 'Y/m/d H-M-S')) |
---|
1422 | else: |
---|
1423 | if not drw.searchInlist(ncobj.variables.keys(),dimvmovie): |
---|
1424 | print errormsg |
---|
1425 | print ' ' + fname + ": file '" + netcdfile + "' has not variable '" + \ |
---|
1426 | dimvmovie + "' !!!" |
---|
1427 | quit(-1) |
---|
1428 | vdmovieunits = objvdmovie.getncattr('units') |
---|
1429 | objvdmovie = ncobj.variables[dimvmovie] |
---|
1430 | if len(objvdmovie.shape) == 1: |
---|
1431 | vasldmovie = objvdmovie[:] |
---|
1432 | else: |
---|
1433 | print errormsg |
---|
1434 | print ' ' + fname + ': shape', objvdmovie.shape, 'of variable with ' + \ |
---|
1435 | 'dimension movie values not ready!!!' |
---|
1436 | quit(-1) |
---|
1437 | |
---|
1438 | ncobj.close() |
---|
1439 | os.system('rm frame_*.png > /dev/null') |
---|
1440 | |
---|
1441 | # graphic |
---|
1442 | ## |
---|
1443 | if graph == 'draw_2D_shad': |
---|
1444 | graphvals = graph_vals.split(':') |
---|
1445 | |
---|
1446 | for iframe in range(moviebeg,moviend,moviefreq): |
---|
1447 | iframeS = str(iframe).zfill(4) |
---|
1448 | |
---|
1449 | drw.percendone((iframe-moviebeg)/moviefreq,(moviend-moviebeg)/moviefreq, \ |
---|
1450 | 5, 'frames') |
---|
1451 | titgraph = dimnmovie + '|=|' + str(valsdmovie[iframe]) + '|' + \ |
---|
1452 | vdmovieunits |
---|
1453 | |
---|
1454 | graphvals[1] = movievalslice(graphvals[1],dimnmovie,iframe) |
---|
1455 | graphvals[6] = titgraph |
---|
1456 | graphvals[7] = 'png' |
---|
1457 | |
---|
1458 | graphv = drw.numVector_String(graphvals, ":") |
---|
1459 | |
---|
1460 | with Capturing() as output: |
---|
1461 | draw_2D_shad(netcdfile, graphv, variable) |
---|
1462 | |
---|
1463 | os.system('mv 2Dfields_shadow.png frame_' + iframeS + '.png') |
---|
1464 | else: |
---|
1465 | print errormsg |
---|
1466 | print ' ' + fname + ": graphic '" + graph + "' not defined !!!" |
---|
1467 | quit(-1) |
---|
1468 | |
---|
1469 | os.system('convert -delay ' + moviedelay + ' -loop 0 frame_*.png create_movie.gif') |
---|
1470 | |
---|
1471 | print "Succesfuly creation of movie file 'create_movie.gif' !!!" |
---|
1472 | |
---|
1473 | return |
---|
1474 | |
---|
1475 | def draw_lines(ncfilens, values, varname): |
---|
1476 | """ Function to draw different lines at the same time from different files |
---|
1477 | draw_trajectories(ncfilens, values, varname): |
---|
1478 | ncfilens= [filen] ',' separated list of netCDF files |
---|
1479 | values= [dimvname]:[valuesaxis]:[dimtit]:[leglabels]:[vtit]:[title]:[graphk] |
---|
1480 | [dimvname]: name of the variable with he values of the common dimension |
---|
1481 | [valuesaxis]: which axis will be used for the values ('x', or 'y') |
---|
1482 | [dimtit]: title for the common dimension |
---|
1483 | [leglabels]: ',' separated list of names for the legend |
---|
1484 | [vartit]: name of the variable in the graph |
---|
1485 | [title]: title of the plot |
---|
1486 | [graphk]: kind of the graphic |
---|
1487 | varname= variable to plot |
---|
1488 | values= 'XLAT:x:latitude:32x32:$wss^{*}$:wss Taylor's turbulence term:pdf' |
---|
1489 | """ |
---|
1490 | |
---|
1491 | fname = 'draw_lines' |
---|
1492 | |
---|
1493 | if values == 'h': |
---|
1494 | print fname + '_____________________________________________________________' |
---|
1495 | print draw_lines.__doc__ |
---|
1496 | quit() |
---|
1497 | |
---|
1498 | expectargs = '[dimvname]:[valuesaxis]:[dimtit]:[leglabels]:[vtit]:[title]:[graphk]' |
---|
1499 | drw.check_arguments(fname,len(expectargs.split(':')),values,':',expectargs) |
---|
1500 | |
---|
1501 | ncfiles = ncfilens.split(',') |
---|
1502 | dimvname = values.split(':')[0] |
---|
1503 | valuesaxis = values.split(':')[1] |
---|
1504 | dimtit = values.split(':')[2] |
---|
1505 | leglabels = values.split(':')[3] |
---|
1506 | vartit = values.split(':')[4] |
---|
1507 | title = values.split(':')[5] |
---|
1508 | graphk = values.split(':')[6] |
---|
1509 | |
---|
1510 | Nfiles = len(ncfiles) |
---|
1511 | |
---|
1512 | # Getting trajectotries |
---|
1513 | ## |
---|
1514 | |
---|
1515 | varvalues = [] |
---|
1516 | dimvalues = [] |
---|
1517 | |
---|
1518 | print ' ' + fname |
---|
1519 | ifn = 0 |
---|
1520 | for ifile in ncfiles: |
---|
1521 | filen = ifile.split('@')[0] |
---|
1522 | |
---|
1523 | print ' filen:',filen |
---|
1524 | |
---|
1525 | if not os.path.isfile(filen): |
---|
1526 | print errormsg |
---|
1527 | print ' ' + fname + ": netCDF file '" + filen + "' does not exist !!" |
---|
1528 | quit(-1) |
---|
1529 | |
---|
1530 | objfile = NetCDFFile(filen, 'r') |
---|
1531 | |
---|
1532 | if not objfile.variables.has_key(dimvname): |
---|
1533 | print errormsg |
---|
1534 | print ' ' + fname + ": netCDF file '" + filen + \ |
---|
1535 | "' does not have variable '" + dimvname + "' !!" |
---|
1536 | quit(-1) |
---|
1537 | |
---|
1538 | if not objfile.variables.has_key(varname): |
---|
1539 | print errormsg |
---|
1540 | print ' ' + fname + ": netCDF file '" + filen + \ |
---|
1541 | "' does not have variable '" + varname + "' !!" |
---|
1542 | quit(-1) |
---|
1543 | |
---|
1544 | vvobj = objfile.variables[varname] |
---|
1545 | if len(vvobj.shape) != 1: |
---|
1546 | print errormsg |
---|
1547 | print ' ' + fname + ': wrong shape:',vvobj.shape," of variable '" + \ |
---|
1548 | varname + "' !!" |
---|
1549 | quit(-1) |
---|
1550 | |
---|
1551 | vdobj = objfile.variables[dimvname] |
---|
1552 | if len(vdobj.shape) != 1: |
---|
1553 | print errormsg |
---|
1554 | print ' ' + fname + ': wrong shape:',vdobj.shape," of variable '" + \ |
---|
1555 | dimvname + "' !!" |
---|
1556 | quit(-1) |
---|
1557 | |
---|
1558 | varvalues.append(vvobj[:]) |
---|
1559 | dimvalues.append(vdobj[:]) |
---|
1560 | |
---|
1561 | if ifn == 0: |
---|
1562 | varunits = vvobj.units |
---|
1563 | |
---|
1564 | objfile.close() |
---|
1565 | |
---|
1566 | ifn = ifn + 1 |
---|
1567 | |
---|
1568 | |
---|
1569 | drw.plot_lines(dimvalues, varvalues, valuesaxis, dimtit, leglabels.split(','), \ |
---|
1570 | vartit, varunits, title, graphk) |
---|
1571 | |
---|
1572 | return |
---|
1573 | |
---|
1574 | def draw_Neighbourghood_evol(filen, values, variable): |
---|
1575 | """ Function to draw the temporal evolution of a neighbourghood around a point |
---|
1576 | draw_Neighbourghood_evol(filen, values, variable) |
---|
1577 | filen= netCDF file name |
---|
1578 | values= [gvarname]:[dimsval]:[neigdims]:[Nneig]:[Ncol]:[timetits]:[tkinds]: |
---|
1579 | [timefmts]:[gtitle]:[shadxtrms]:[cbar]:[gkind]:[ofile] |
---|
1580 | [dimsval]: [dimn1]|[val1]|[dimv1],...,[dimnN]|[valN]|[dimvN] dimension names, values to get |
---|
1581 | (-1, for all; no name/value pair given full length) and variable with values of the dimension |
---|
1582 | NOTE: when dimsval[X,Y] == neigdims[X,Y], valX,valY --> valX,valY-Nneig/2, valX,valY+Nneig/2 |
---|
1583 | [neigdims]: [dimnX],[dimnY] dimensions mnames along which the neigbourghood should be defined |
---|
1584 | [Nneig]: Number of grid points of the full side of the box (odd value) |
---|
1585 | [Ncol]: Number of columns ('auto': square final plot) |
---|
1586 | [gvarname]: name of the variable to appear in the graph |
---|
1587 | [timetits]: [titX],[titY] titles of the axes ('|' for spaces) |
---|
1588 | [tkinds]: [tkindX]|[tkindY] kinds of time to appear in the graph |
---|
1589 | 'Nval': according to a given number of values as 'Nval',[Nval] |
---|
1590 | 'exct': according to an exact time unit as 'exct',[tunit]; |
---|
1591 | tunit= [Nunits],[tu]; [tu]= 'c': centuries, 'y': year, 'm': month, |
---|
1592 | 'w': week, 'd': day, 'h': hour, 'i': minute, 's': second, |
---|
1593 | 'l': milisecond |
---|
1594 | [timefmts]: [tfmtX],[tfmtY] format of the time labels |
---|
1595 | [gtitle]: title of the graphic ('|' for spaces) |
---|
1596 | [shadxtrms]: Extremes for the shading |
---|
1597 | [cbar]: colorbar to use |
---|
1598 | [gkind]: kind of graphical output |
---|
1599 | [ofile]: True/False whether the netcdf with data should be created or not |
---|
1600 | variable= name of the variable |
---|
1601 | values = 'q:Time|-1|Times,bottom_top|6|ZNU,south_north|3|XLAT,west_east|26|XLONG:south_north,west_east:5:auto:time|($[DD]^{[HH]}$),time|($[DD]^{[HH]}$):exct,2,h|exct,1,d:$%d^{%H}$,$%d^{%H}$:5|pts|neighbourghood|temporal|evolution:0.0,0.004:BuPu:pdf:True' |
---|
1602 | """ |
---|
1603 | |
---|
1604 | fname = 'draw_Neighbourghood_evol' |
---|
1605 | |
---|
1606 | if values == 'h': |
---|
1607 | print fname + '_____________________________________________________________' |
---|
1608 | print draw_Neighbourghood_evol.__doc__ |
---|
1609 | quit() |
---|
1610 | |
---|
1611 | expectargs = ['[gvarname]', '[dimsval]', '[neigdims]', '[Nneig]', '[Ncol]', \ |
---|
1612 | '[timetits]', '[tkinds]', '[timefmts]', '[gtitle]', '[shadxtrms]', '[cbar]', \ |
---|
1613 | '[gkind]', '[ofile]'] |
---|
1614 | |
---|
1615 | drw.check_arguments(fname,len(expectargs),values,':',expectargs) |
---|
1616 | |
---|
1617 | gvarname = values.split(':')[0] |
---|
1618 | dimsval = values.split(':')[1].split(',') |
---|
1619 | neigdims = values.split(':')[2].split(',') |
---|
1620 | Nneig = int(values.split(':')[3]) |
---|
1621 | Ncol0 = values.split(':')[4] |
---|
1622 | timetits = values.split(':')[5].split(',') |
---|
1623 | timekinds = values.split(':')[6].split('|') |
---|
1624 | timefmts = values.split(':')[7].split(',') |
---|
1625 | gtitle = values.split(':')[8].replace('|',' ') |
---|
1626 | shadxtrms = values.split(':')[9].split(',') |
---|
1627 | cbar = values.split(':')[10] |
---|
1628 | gkind = values.split(':')[11] |
---|
1629 | ofile = values.split(':')[12] |
---|
1630 | |
---|
1631 | if Ncol0 != 'auto': |
---|
1632 | Ncol = int(Ncol0) |
---|
1633 | else: |
---|
1634 | Ncol = Ncol0 |
---|
1635 | |
---|
1636 | timetits[0] = timetits[0].replace('|',' ') |
---|
1637 | timetits[1] = timetits[1].replace('|',' ') |
---|
1638 | |
---|
1639 | if np.mod(Nneig,2) == 0: |
---|
1640 | print errormsg |
---|
1641 | print ' ' + fname + ": an odd value for 'Nneig':",Nneig,'is required !!!' |
---|
1642 | quit(-1) |
---|
1643 | |
---|
1644 | Nneig2 = int(Nneig/2) |
---|
1645 | |
---|
1646 | # Values to slice the variable |
---|
1647 | dimvslice = {} |
---|
1648 | dimvvalues = {} |
---|
1649 | for dimvs in dimsval: |
---|
1650 | dimn = dimvs.split('|')[0] |
---|
1651 | dimv = int(dimvs.split('|')[1]) |
---|
1652 | dimnv = dimvs.split('|')[2] |
---|
1653 | |
---|
1654 | dimvvalues[dimn] = dimnv |
---|
1655 | dimvslice[dimn] = dimv |
---|
1656 | |
---|
1657 | ncobj = NetCDFFile(filen, 'r') |
---|
1658 | |
---|
1659 | varobj = ncobj.variables[variable] |
---|
1660 | |
---|
1661 | slicevar = [] |
---|
1662 | newdimn = [] |
---|
1663 | newdimsvar = {} |
---|
1664 | |
---|
1665 | for dimn in varobj.dimensions: |
---|
1666 | if not drw.searchInlist(dimvslice.keys(), dimn): |
---|
1667 | dimsize = len(ncobj.dimensions[dimn]) |
---|
1668 | slicevar.append(slice(0, dimsize+1)) |
---|
1669 | newdimn.append(dimn) |
---|
1670 | newdimsvar[dimn] = dimseize |
---|
1671 | |
---|
1672 | for dimslicen in dimvslice.keys(): |
---|
1673 | if dimn == dimslicen: |
---|
1674 | if dimvslice[dimn] != -1: |
---|
1675 | if drw.searchInlist(neigdims, dimn): |
---|
1676 | slicevar.append(slice(dimvslice[dimn]-Nneig2, \ |
---|
1677 | dimvslice[dimn]+Nneig2+1)) |
---|
1678 | newdimn.append(dimn) |
---|
1679 | newdimsvar[dimn] = Nneig |
---|
1680 | break |
---|
1681 | else: |
---|
1682 | slicevar.append(slice(dimvslice[dimn], dimvslice[dimn]+1)) |
---|
1683 | break |
---|
1684 | else: |
---|
1685 | dimsize = len(ncobj.dimensions[dimn]) |
---|
1686 | slicevar.append(slice(0, dimsize+1)) |
---|
1687 | newdimn.append(dimn) |
---|
1688 | newdimsvar[dimn] = dimsize |
---|
1689 | break |
---|
1690 | |
---|
1691 | varv = varobj[tuple(slicevar)] |
---|
1692 | |
---|
1693 | if len(newdimn) != 3: |
---|
1694 | print errormsg |
---|
1695 | print ' ' + fname + ': sliced variable with shape=', varv.shape, \ |
---|
1696 | ' must have three dimensions',len(varv.shape),'given !!' |
---|
1697 | quit(-1) |
---|
1698 | |
---|
1699 | newdims = [] |
---|
1700 | for nwdims in newdimn: |
---|
1701 | newdims.append(newdimsvar[nwdims]) |
---|
1702 | |
---|
1703 | # The dimension which is not in the neighbourhood dimensions must be time! |
---|
1704 | for dim1 in newdimn: |
---|
1705 | if not drw.searchInlist(neigdims, dim1): |
---|
1706 | dimt = newdimsvar[dim1] |
---|
1707 | dimtime = dim1 |
---|
1708 | |
---|
1709 | if Ncol == 'auto': |
---|
1710 | dimtsqx = int(np.sqrt(dimt)) + 1 |
---|
1711 | dimtsqy = int(np.sqrt(dimt)) + 1 |
---|
1712 | else: |
---|
1713 | dimtsqx = int(Ncol) |
---|
1714 | dimtsqy = dimt/dimtsqx + 1 |
---|
1715 | |
---|
1716 | neighbourghood = np.ones((dimtsqy*Nneig,dimtsqx*Nneig), dtype=np.float)*fillValue |
---|
1717 | |
---|
1718 | for it in range(dimt): |
---|
1719 | ity = int(it/dimtsqx) |
---|
1720 | itx = it-ity*dimtsqx |
---|
1721 | |
---|
1722 | itty = (dimtsqy - ity - 1)*Nneig + Nneig2 |
---|
1723 | ittx = itx*Nneig + Nneig2 |
---|
1724 | |
---|
1725 | neighbourghood[itty-Nneig2:itty+Nneig2+1,ittx-Nneig2:ittx+Nneig2+1]= \ |
---|
1726 | varv[it,::-1,:] |
---|
1727 | |
---|
1728 | variablevals = drw.variables_values(variable) |
---|
1729 | if drw.searchInlist(varobj.ncattrs(), 'units'): |
---|
1730 | vunits = varobj.units |
---|
1731 | else: |
---|
1732 | vunits = variablevals[5] |
---|
1733 | |
---|
1734 | # Time values at the X/Y axes |
---|
1735 | if ncobj.variables[dimvvalues[dimtime]].dtype == '|S1': |
---|
1736 | print ' ' + fname + ': WRF time variable!' |
---|
1737 | refdate = '19491201000000' |
---|
1738 | tunitsval = 'hours' |
---|
1739 | dimtvalues = np.zeros((dimt), dtype=np.float) |
---|
1740 | tvals = ncobj.variables[dimvvalues[dimtime]] |
---|
1741 | yrref=refdate[0:4] |
---|
1742 | monref=refdate[4:6] |
---|
1743 | dayref=refdate[6:8] |
---|
1744 | horref=refdate[8:10] |
---|
1745 | minref=refdate[10:12] |
---|
1746 | secref=refdate[12:14] |
---|
1747 | |
---|
1748 | refdateS = yrref + '/' + monref + '/' + dayref + '_' + horref + ':' + \ |
---|
1749 | minref + ':' + secref |
---|
1750 | tunits = tunitsval + ' since ' + refdateS |
---|
1751 | for it in range(dimt): |
---|
1752 | wrfdates = drw.datetimeStr_conversion(tvals[it,:],'WRFdatetime', 'matYmdHMS') |
---|
1753 | dimtvalues[it] = drw.realdatetime1_CFcompilant(wrfdates, refdate, tunitsval) |
---|
1754 | else: |
---|
1755 | dimtvalues = ncobj.variables[dimvvalues[dimtime]][:] |
---|
1756 | tunits = ncobj.variables[newdimsvar[dimtime]].units |
---|
1757 | |
---|
1758 | dimxv = dimtvalues[0:dimtsqx] |
---|
1759 | dimyv = dimtvalues[0:dimt:dimtsqx] |
---|
1760 | |
---|
1761 | print 'Lluis lens: dimxv, dimyv:',len(dimxv), len(dimyv) |
---|
1762 | |
---|
1763 | dimn = ['time','time'] |
---|
1764 | |
---|
1765 | if ofile == 'True': |
---|
1766 | ofilen = 'Neighbourghood_evol.nc' |
---|
1767 | newnc = NetCDFFile(ofilen, 'w') |
---|
1768 | # Dimensions |
---|
1769 | newdim = newnc.createDimension('time',None) |
---|
1770 | newdim = newnc.createDimension('y',dimtsqy*Nneig) |
---|
1771 | newdim = newnc.createDimension('x',dimtsqx*Nneig) |
---|
1772 | # Dimension values |
---|
1773 | newvar = newnc.createVariable('time','f8',('time')) |
---|
1774 | newvar[:] = np.arange(dimt) |
---|
1775 | newattr = drw.basicvardef(newvar, 'time','time',tunits) |
---|
1776 | # Neighbourhghood variable |
---|
1777 | newvar = newnc.createVariable(variable + 'neigevol', 'f4', ('y','x'), \ |
---|
1778 | fill_value=fillValue) |
---|
1779 | newvar[:] = neighbourghood |
---|
1780 | |
---|
1781 | newnc.sync() |
---|
1782 | newnc.close() |
---|
1783 | print fname + ": Successfull generation of file '" + ofilen + "' !!" |
---|
1784 | |
---|
1785 | # Time ticks |
---|
1786 | timeposX, timelabelsX = drw.CFtimes_plot(dimxv, tunits, timekinds[0], timefmts[0]) |
---|
1787 | timeposY, timelabelsY = drw.CFtimes_plot(dimyv, tunits, timekinds[1], timefmts[1]) |
---|
1788 | |
---|
1789 | timepos = [timeposX, timeposY[::-1]] |
---|
1790 | timelabels = [timelabelsX, timelabelsY[::-1]] |
---|
1791 | |
---|
1792 | for i in range(2): |
---|
1793 | if shadxtrms[i][0:1] != 'S': |
---|
1794 | shadxtrms[i] = np.float(shadxtrms[i]) |
---|
1795 | |
---|
1796 | drw.plot_Neighbourghood_evol(neighbourghood, dimxv, dimyv, gvarname, timetits, \ |
---|
1797 | timepos, timelabels, cbar, Nneig, shadxtrms, vunits, gtitle, gkind, True) |
---|
1798 | |
---|
1799 | def draw_timeSeries(filen, values, variables): |
---|
1800 | """ Function to draw a time-series |
---|
1801 | draw_timeSeries(filen, values, variable): |
---|
1802 | filen= name of the file |
---|
1803 | values= [gvarname]:[timetit]:[tkind]:[timefmt]:[title]:[locleg]:[gkind] |
---|
1804 | [gvarname]: name of the variable to appear in the graph |
---|
1805 | [timetit]: title of the time axis (assumed x-axis, '|' for spaces) |
---|
1806 | [tkind]: kind of time to appear in the graph (assumed x-axis) |
---|
1807 | 'Nval': according to a given number of values as 'Nval',[Nval] |
---|
1808 | 'exct': according to an exact time unit as 'exct',[tunit]; |
---|
1809 | tunit= [Nunits],[tu]; [tu]= 'c': centuries, 'y': year, 'm': month, |
---|
1810 | 'w': week, 'd': day, 'h': hour, 'i': minute, 's': second, |
---|
1811 | 'l': milisecond |
---|
1812 | [timefmt]: format of the time labels |
---|
1813 | [title]: title of the graphic ('|' for spaces) |
---|
1814 | [locleg]: location of the legend (-1, autmoatic) |
---|
1815 | 1: 'upper right', 2: 'upper left', 3: 'lower left', 4: 'lower right', |
---|
1816 | 5: 'right', 6: 'center left', 7: 'center right', 8: 'lower center', |
---|
1817 | 9: 'upper center', 10: 'center' |
---|
1818 | [gkind]: kind of graphical output |
---|
1819 | variables= [varname],[timename] names of variable and variable with times |
---|
1820 | draw_timeSeries('wrfout_d01_1979-12-01_00:00:00_bottom_top_B6-E6-I1_south_north_B3-E3-I1_west_east_B26-E26-I1.nc', 'dt_con:time|($[DD]^{[HH]}$):exct,12,h:$%d^{%H}$:time|evolution|at|-1|6|3|26:1:pdf', 'LDQCON,time') |
---|
1821 | """ |
---|
1822 | |
---|
1823 | fname = 'draw_timeSeries' |
---|
1824 | |
---|
1825 | if values == 'h': |
---|
1826 | print fname + '_____________________________________________________________' |
---|
1827 | print draw_timeSeries.__doc__ |
---|
1828 | quit() |
---|
1829 | |
---|
1830 | expectargs = ['[gvarname]', '[timetit]', '[tkind]', '[timefmt]', '[title]', \ |
---|
1831 | '[locleg]', '[gkind]'] |
---|
1832 | |
---|
1833 | drw.check_arguments(fname,len(expectargs),values,':',expectargs) |
---|
1834 | |
---|
1835 | gvarname = values.split(':')[0] |
---|
1836 | timetit = values.split(':')[1].replace('|',' ') |
---|
1837 | tkind = values.split(':')[2] |
---|
1838 | timefmt = values.split(':')[3] |
---|
1839 | title = values.split(':')[4].replace('|',' ') |
---|
1840 | locleg = int(values.split(':')[5]) |
---|
1841 | gkind = values.split(':')[6] |
---|
1842 | |
---|
1843 | ncobj = NetCDFFile(filen, 'r') |
---|
1844 | |
---|
1845 | variable = variables.split(',')[0] |
---|
1846 | timevar = variables.split(',')[1] |
---|
1847 | |
---|
1848 | if not ncobj.variables.has_key(variable): |
---|
1849 | print errormsg |
---|
1850 | print ' ' + fname + ": file '" + filen + "' does not have variable '" + \ |
---|
1851 | variable + "' !!" |
---|
1852 | quit(-1) |
---|
1853 | |
---|
1854 | if not ncobj.variables.has_key(timevar): |
---|
1855 | print errormsg |
---|
1856 | print ' ' + fname + ": file '" + filen + "' does not have variable time '" \ |
---|
1857 | + timevar + "' !!" |
---|
1858 | quit(-1) |
---|
1859 | |
---|
1860 | varobj = ncobj.variables[variable] |
---|
1861 | timeobj = ncobj.variables[timevar] |
---|
1862 | |
---|
1863 | dimt = len(timeobj[:]) |
---|
1864 | varvals = np.zeros((2,dimt), dtype=np.float) |
---|
1865 | |
---|
1866 | gunits = varobj.getncattr('units') |
---|
1867 | tunits = timeobj.getncattr('units') |
---|
1868 | |
---|
1869 | varvals[0,:], valpot, newgunits, Spot = drw.pot_values(varobj[:].flatten(), gunits) |
---|
1870 | varvals[1,:] = timeobj[:] |
---|
1871 | |
---|
1872 | tseriesvals = [] |
---|
1873 | tseriesvals.append(varvals) |
---|
1874 | |
---|
1875 | drw.plot_TimeSeries(tseriesvals, Spot + drw.units_lunits(gunits), tunits, \ |
---|
1876 | 'TimeSeries', gvarname, timetit, tkind, timefmt, title, \ |
---|
1877 | [gvarname.replace('_','\_')], locleg, gkind) |
---|
1878 | |
---|
1879 | return |
---|
1880 | |
---|
1881 | #draw_timeSeries('wrfout_d01_1979-12-01_00:00:00_bottom_top_B6-E6-I1_south_north_B3-E3-I1_west_east_B26-E26-I1.nc', 'dt_con:time|($[DD]^{[HH]}$):exct,12,h:$%d^{%H}$:time|evolution|at|-1|6|3|26:1:pdf', 'LDQCON,time') |
---|
1882 | |
---|
1883 | def draw_trajectories(trjfilens, values, observations): |
---|
1884 | """ Function to draw different trajectories at the same time |
---|
1885 | draw_trajectories(trjfilens, values, observations): |
---|
1886 | trjfilens= [filen]@[Tint]@[map] ',' separated list of files with trajectories, |
---|
1887 | time intervals and reference maps (first one will be used to plot) |
---|
1888 | [filen]: name of the file to use (lines with '#', not readed) as: |
---|
1889 | [t-step] [x] [y] |
---|
1890 | [Tint]: interval of time as [Tbeg]@[Tend] or -1 for all the interval |
---|
1891 | [map]: [file]#[lonname]#[latname] |
---|
1892 | [file]; with the [lon],[lat] matrices |
---|
1893 | [lonname],[latname]; names of the longitudes and latitudes variables |
---|
1894 | values=[leglabels]|[lonlatlims]|[title]|[graphk]|[mapkind] |
---|
1895 | [leglabels]: ',' separated list of names for the legend |
---|
1896 | [lonlatlims]: limits of the map [lonmin, latmin, lonmax, latmax] or None |
---|
1897 | [title]: title of the plot |
---|
1898 | [graphk]: kind of the graphic |
---|
1899 | [mapkind]: drawing coastaline ([proj],[res]) or None |
---|
1900 | [proj]: projection |
---|
1901 | * 'cyl', cilindric |
---|
1902 | * 'lcc', lambert conformal |
---|
1903 | [res]: resolution: |
---|
1904 | * 'c', crude |
---|
1905 | * 'l', low |
---|
1906 | * 'i', intermediate |
---|
1907 | * 'h', high |
---|
1908 | * 'f', full |
---|
1909 | obsevations= [obsfile],[obsname],[Tint],[null] |
---|
1910 | [obsfile]: name fo the File with the observations as [t-step] [lat] [lon] |
---|
1911 | [obsname]: name of the observations in the graph |
---|
1912 | [Tint]: interval of time as [Tbeg]@[Tend] or -1 for all the interval |
---|
1913 | [null]: null value for the observed trajectory |
---|
1914 | """ |
---|
1915 | |
---|
1916 | fname = 'draw_trajectories' |
---|
1917 | |
---|
1918 | if values == 'h': |
---|
1919 | print fname + '_____________________________________________________________' |
---|
1920 | print draw_trajectories.__doc__ |
---|
1921 | quit() |
---|
1922 | |
---|
1923 | trjfiles = trjfilens.split(',') |
---|
1924 | leglabels = values.split('|')[0] |
---|
1925 | lonlatlims = values.split('|')[1] |
---|
1926 | title = values.split('|')[2] |
---|
1927 | graphk = values.split('|')[3] |
---|
1928 | mapkind = values.split('|')[4] |
---|
1929 | |
---|
1930 | Nfiles = len(trjfiles) |
---|
1931 | |
---|
1932 | # Getting trajectotries |
---|
1933 | ## |
---|
1934 | |
---|
1935 | lontrjvalues = [] |
---|
1936 | lattrjvalues = [] |
---|
1937 | |
---|
1938 | print ' ' + fname |
---|
1939 | ifn = 0 |
---|
1940 | for ifile in trjfiles: |
---|
1941 | filen = ifile.split('@')[0] |
---|
1942 | Tint = ifile.split('@')[1] |
---|
1943 | |
---|
1944 | print ' trajectory:',filen |
---|
1945 | |
---|
1946 | if Tint != '-1': |
---|
1947 | Tbeg = Tint |
---|
1948 | Tend = ifile.split('@')[2] |
---|
1949 | mapv = ifile.split('@')[3] |
---|
1950 | else: |
---|
1951 | mapv = ifile.split('@')[2] |
---|
1952 | |
---|
1953 | if not os.path.isfile(filen): |
---|
1954 | print errormsg |
---|
1955 | print ' ' + fname + ": trajectory file '" + filen + "' does not exist !!" |
---|
1956 | quit(-1) |
---|
1957 | |
---|
1958 | # Charging longitude and latitude values |
---|
1959 | ## |
---|
1960 | lonvals, latvals = drw.lonlat_values(mapv.split('#')[0], mapv.split('#')[1], \ |
---|
1961 | mapv.split('#')[2]) |
---|
1962 | |
---|
1963 | if ifn == 0: mapref = mapv |
---|
1964 | ifn = ifn + 1 |
---|
1965 | |
---|
1966 | objfile = open(filen, 'r') |
---|
1967 | trjtimev = [] |
---|
1968 | trjxv = [] |
---|
1969 | trjyv = [] |
---|
1970 | |
---|
1971 | for line in objfile: |
---|
1972 | if line[0:1] != '#': |
---|
1973 | trjtimev.append(int(line.split(' ')[0])) |
---|
1974 | trjxv.append(int(line.split(' ')[1])) |
---|
1975 | trjyv.append(int(line.split(' ')[2])) |
---|
1976 | |
---|
1977 | objfile.close() |
---|
1978 | |
---|
1979 | if Tint != '-1': |
---|
1980 | lontrjvalues.append(lonvals[trjyv[Tint:Tend+1], trjxv[Tint:Tend+1]]) |
---|
1981 | lattrjvalues.append(latvals[trjyv[Tint:Tend+1], trjxv[Tint:Tend+1]]) |
---|
1982 | else: |
---|
1983 | lontrjvalues.append(lonvals[trjyv[:], trjxv[:]]) |
---|
1984 | lattrjvalues.append(latvals[trjyv[:], trjxv[:]]) |
---|
1985 | |
---|
1986 | # lonlatlimits |
---|
1987 | ## |
---|
1988 | |
---|
1989 | if lonlatlims == 'None': |
---|
1990 | lonlatlimsv = None |
---|
1991 | else: |
---|
1992 | lonlatlimsv = np.zeros((4), dtype=np.float) |
---|
1993 | lonlatlimsv[0] = np.float(lonlatlims.split(',')[0]) |
---|
1994 | lonlatlimsv[1] = np.float(lonlatlims.split(',')[1]) |
---|
1995 | lonlatlimsv[2] = np.float(lonlatlims.split(',')[2]) |
---|
1996 | lonlatlimsv[3] = np.float(lonlatlims.split(',')[3]) |
---|
1997 | |
---|
1998 | # lon/lat objects |
---|
1999 | ## |
---|
2000 | objnc = NetCDFFile(mapref.split('#')[0]) |
---|
2001 | lonobj = objnc.variables[mapref.split('#')[1]] |
---|
2002 | latobj = objnc.variables[mapref.split('#')[2]] |
---|
2003 | |
---|
2004 | # map |
---|
2005 | ## |
---|
2006 | if mapkind == 'None': |
---|
2007 | mapkindv = None |
---|
2008 | else: |
---|
2009 | mapkindv = mapkind |
---|
2010 | |
---|
2011 | if observations is None: |
---|
2012 | obsname = None |
---|
2013 | else: |
---|
2014 | obsfile = observations.split(',')[0] |
---|
2015 | obsname = observations.split(',')[1] |
---|
2016 | Tint = observations.split(',')[2] |
---|
2017 | null = np.float(observations.split(',')[3]) |
---|
2018 | print ' observational trajectory:',obsfile |
---|
2019 | |
---|
2020 | if not os.path.isfile(obsfile): |
---|
2021 | print errormsg |
---|
2022 | print ' ' + fname + ": observations trajectory file '" + obsfile + \ |
---|
2023 | "' does not exist !!" |
---|
2024 | quit(-1) |
---|
2025 | |
---|
2026 | objfile = open(obsfile, 'r') |
---|
2027 | obstrjtimev = [] |
---|
2028 | obstrjxv = [] |
---|
2029 | obstrjyv = [] |
---|
2030 | |
---|
2031 | for line in objfile: |
---|
2032 | if line[0:1] != '#': |
---|
2033 | lon = np.float(line.split(' ')[2]) |
---|
2034 | lat = np.float(line.split(' ')[1]) |
---|
2035 | if not lon == null and not lat == null: |
---|
2036 | obstrjtimev.append(int(line.split(' ')[0])) |
---|
2037 | obstrjxv.append(lon) |
---|
2038 | obstrjyv.append(lat) |
---|
2039 | else: |
---|
2040 | obstrjtimev.append(int(line.split(' ')[0])) |
---|
2041 | obstrjxv.append(None) |
---|
2042 | obstrjyv.append(None) |
---|
2043 | |
---|
2044 | objfile.close() |
---|
2045 | |
---|
2046 | if Tint != '-1': |
---|
2047 | Tint = int(observations.split(',')[2].split('@')[0]) |
---|
2048 | Tend = int(observations.split(',')[2].split('@')[1]) |
---|
2049 | lontrjvalues.append(obstrjxv[Tint:Tend+1]) |
---|
2050 | lattrjvalues.append(obstrjyv[Tint:Tend+1]) |
---|
2051 | else: |
---|
2052 | lontrjvalues.append(obstrjxv[:]) |
---|
2053 | lattrjvalues.append(obstrjyv[:]) |
---|
2054 | |
---|
2055 | drw.plot_Trajectories(lontrjvalues, lattrjvalues, leglabels.split(','), \ |
---|
2056 | lonobj, latobj, lonlatlimsv, title, graphk, mapkindv, obsname) |
---|
2057 | |
---|
2058 | objnc.close() |
---|
2059 | |
---|
2060 | return |
---|
2061 | |
---|
2062 | def draw_vals_trajectories(ncfile, values, variable): |
---|
2063 | """ Function to draw values from the outputs from 'compute_tevolboxtraj' |
---|
2064 | draw_vals_trajectories(ncfile, values, variable) |
---|
2065 | ncfile= [ncfile] ',' list of files to use |
---|
2066 | values= [statistics]:[Tint]:[labels]@[locleg]:[gvarname]:[timetit]:[tkind]:[timefmt]:[title]:[gkind] |
---|
2067 | [statistics]: which statistics to use, from: 'center', 'min', 'max', 'mean', |
---|
2068 | 'mean2', 'stdev' |
---|
2069 | [Tint]: [Tbeg]@[Tend] or None, interval of time to plot or -1 for all the times |
---|
2070 | [labels]: ',' separated list of labels for the legend |
---|
2071 | [locleg]: location of the legend (-1, autmoatic) |
---|
2072 | 1: 'upper right', 2: 'upper left', 3: 'lower left', 4: 'lower right', |
---|
2073 | 5: 'right', 6: 'center left', 7: 'center right', 8: 'lower center', |
---|
2074 | 9: 'upper center', 10: 'center' |
---|
2075 | [gvarname]: name of the variable to appear in the graph |
---|
2076 | [timetit]: title of the time axis (assumed x-axis, '|' for spaces) |
---|
2077 | [tkind]: kind of time to appear in the graph (assumed x-axis) |
---|
2078 | 'Nval': according to a given number of values as 'Nval',[Nval] |
---|
2079 | 'exct': according to an exact time unit as 'exct',[tunit]; |
---|
2080 | tunit= [Nunits],[tu]; [tu]= 'c': centuries, 'y': year, 'm': month, |
---|
2081 | 'w': week, 'd': day, 'h': hour, 'i': minute, 's': second, |
---|
2082 | 'l': milisecond |
---|
2083 | [timefmt]: format of the time labels |
---|
2084 | [title]: title of the graphic ('|' for spaces) |
---|
2085 | [gkind]: kind of graphical output |
---|
2086 | variable= variable to use |
---|
2087 | """ |
---|
2088 | |
---|
2089 | fname = 'draw_vals_trajectories' |
---|
2090 | |
---|
2091 | if values == 'h': |
---|
2092 | print fname + '_____________________________________________________________' |
---|
2093 | print draw_vals_trajectories.__doc__ |
---|
2094 | quit() |
---|
2095 | |
---|
2096 | sims = ncfile.split(',') |
---|
2097 | |
---|
2098 | if len(values.split(':')) != 9: |
---|
2099 | print errormsg |
---|
2100 | print ' ' + fname + ': wrong number of values!', len(values.split(':')), \ |
---|
2101 | 'given 9 needed!!' |
---|
2102 | print ' ',values.split(':') |
---|
2103 | quit(-1) |
---|
2104 | |
---|
2105 | statistics = values.split(':')[0] |
---|
2106 | Tint = values.split(':')[1] |
---|
2107 | labels = values.split(':')[2] |
---|
2108 | gvarname = values.split(':')[3] |
---|
2109 | timetit = values.split(':')[4].replace('|',' ') |
---|
2110 | tkind = values.split(':')[5] |
---|
2111 | timefmt = values.split(':')[6] |
---|
2112 | title = values.split(':')[7].replace('|',' ') |
---|
2113 | gkind = values.split(':')[8] |
---|
2114 | |
---|
2115 | leglabels = labels.split('@')[0].split(',') |
---|
2116 | locleg = int(labels.split('@')[1]) |
---|
2117 | |
---|
2118 | Nsims = len(sims) |
---|
2119 | |
---|
2120 | if Tint != '-1': |
---|
2121 | tini = np.float(Tint.split('@')[0]) |
---|
2122 | tend = np.float(Tint.split('@')[1]) |
---|
2123 | else: |
---|
2124 | tini = -1. |
---|
2125 | tend = -1. |
---|
2126 | |
---|
2127 | vartimetrjv = [] |
---|
2128 | |
---|
2129 | print ' ' + fname |
---|
2130 | for trjfile in sims: |
---|
2131 | print ' ' + trjfile + ' ...' |
---|
2132 | if not os.path.isfile(trjfile): |
---|
2133 | print errormsg |
---|
2134 | print ' ' + fname + ": trajectory file: '" + trjfile + \ |
---|
2135 | "' does not exist !!" |
---|
2136 | quit(-1) |
---|
2137 | |
---|
2138 | trjobj = NetCDFFile(trjfile, 'r') |
---|
2139 | otim = trjobj.variables['time'] |
---|
2140 | if not trjobj.variables.has_key(statistics + 'box_' + variable): |
---|
2141 | print errormsg |
---|
2142 | print ' ' + fname + ": file '" + trjfile + "' does not have variable '"+\ |
---|
2143 | statistics + 'box_' + variable + "' !!" |
---|
2144 | quit(-1) |
---|
2145 | ovar = trjobj.variables[statistics + 'box_' + variable] |
---|
2146 | dimt = otim.shape[0] |
---|
2147 | |
---|
2148 | if trjfile == sims[0]: |
---|
2149 | gunits = ovar.getncattr('units') |
---|
2150 | lname = ovar.getncattr('long_name') |
---|
2151 | tunits = otim.getncattr('units') |
---|
2152 | |
---|
2153 | if tini != -1: |
---|
2154 | tiniid = -1 |
---|
2155 | tendid = -1 |
---|
2156 | for itv in range(dimt): |
---|
2157 | if otim[itv] <= tini and otim[itv+1] >= tini: tiniid = itv |
---|
2158 | if otim[itv] <= tend and otim[itv+1] >= tend: tendid = itv |
---|
2159 | |
---|
2160 | if tiniid == -1 or tendid == -1: |
---|
2161 | print errormsg |
---|
2162 | print ' ' + main + ' time interval ', tini,',',tend,' not found: ', \ |
---|
2163 | tendid, ',', tiniid, ' !!' |
---|
2164 | print ' data interval [',otim[0], otim[dimt-1],']' |
---|
2165 | quit(-1) |
---|
2166 | dimt = tendid - tiniid + 1 |
---|
2167 | |
---|
2168 | else: |
---|
2169 | dimt = otim.shape[0] |
---|
2170 | |
---|
2171 | valsv = np.zeros((2,dimt), dtype=np.float) |
---|
2172 | |
---|
2173 | if tini == -1: |
---|
2174 | valsv[1,:] = otim[:] |
---|
2175 | valsv[0,:] = ovar[:] |
---|
2176 | else: |
---|
2177 | valsv[1,:] = otim[tiniid:tendid+1] |
---|
2178 | valsv[0,:] = ovar[tiniid:tendid+1] |
---|
2179 | |
---|
2180 | vartimetrjv.append(valsv) |
---|
2181 | trjobj.close() |
---|
2182 | |
---|
2183 | drw.plot_TimeSeries(vartimetrjv, drw.units_lunits(gunits), tunits, \ |
---|
2184 | 'val_trajectories_' + statistics, gvarname, timetit, tkind, timefmt, title, \ |
---|
2185 | leglabels, locleg, gkind) |
---|
2186 | |
---|
2187 | def variable_values(values): |
---|
2188 | """ Function to give back values for a given variable |
---|
2189 | values= [varname] name of the variable |
---|
2190 | """ |
---|
2191 | |
---|
2192 | fname = 'variable_values' |
---|
2193 | |
---|
2194 | values = drw.variables_values(values) |
---|
2195 | |
---|
2196 | print fname,'values:',values |
---|
2197 | print fname,'variable_name:',values[0] |
---|
2198 | print fname,'standard_name:',values[1] |
---|
2199 | print fname,'min,max:',str(values[2]) + ',' + str(values[3]) |
---|
2200 | print fname,'long_name:',values[4] |
---|
2201 | print fname,'units:',values[5] |
---|
2202 | print fname,'shad_colors:',values[6] |
---|
2203 | print fname,'all_values:',drw.numVector_String(values,',') |
---|
2204 | |
---|
2205 | return |
---|
2206 | |
---|
2207 | ####### ###### ##### #### ### ## # |
---|
2208 | |
---|
2209 | ngraphics = "'" + drw.numVector_String(namegraphics, "', '") + "'" |
---|
2210 | |
---|
2211 | ### Options |
---|
2212 | ##string_operation="operation to make: " + '\n' + " out, output values -S inidim1,[inidim2,...]:enddim1,[enddim2,...]" |
---|
2213 | string_operation="""operation to make: |
---|
2214 | draw_topo_geogrid, draws topography from a WPS geo_em.d[nn].nc: -S [minTopo],[maxTopo]:[SW_lon],[SW_lat],[NE_lon],[NE_lat]:[title]:[graphic_kind]:[projection],[res_coastline] |
---|
2215 | draw_2D_shad_cont, draws two 2D fields, first with shading second with contour lines: -v [varns],[varnc] -S [vnamefs],[vnamefc],[dimxvn],[dimyvn],[colorbar],[ckind],[clabfmt],[sminv]:[smaxv],[sminc]:[smaxv]:[Nlev],[figt],[kindfig],[reverse] |
---|
2216 | [ckind]: |
---|
2217 | 'cmap': as it gets from colorbar |
---|
2218 | 'fixc,[colname]': fixed color [colname], all stright lines |
---|
2219 | 'fixsignc,[colname]': fixed color [colname], >0 stright, <0 dashed line |
---|
2220 | """ |
---|
2221 | |
---|
2222 | #print string_operation |
---|
2223 | |
---|
2224 | parser = OptionParser() |
---|
2225 | parser.add_option("-f", "--netCDF_file", dest="ncfile", |
---|
2226 | help="file to use", metavar="FILE") |
---|
2227 | parser.add_option("-o", "--operation", type='choice', dest="operation", |
---|
2228 | choices=namegraphics, |
---|
2229 | help="operation to make: " + ngraphics, metavar="OPER") |
---|
2230 | parser.add_option("-S", "--valueS", dest="values", |
---|
2231 | help="[WHEN APPLICABLE] values to use according to the operation", metavar="VALUES") |
---|
2232 | parser.add_option("-v", "--variable", dest="varname", |
---|
2233 | help="[WHEN APPLICABLE] variable to check", metavar="VAR") |
---|
2234 | |
---|
2235 | (opts, args) = parser.parse_args() |
---|
2236 | |
---|
2237 | ####### ####### |
---|
2238 | ## MAIN |
---|
2239 | ####### |
---|
2240 | |
---|
2241 | # Not checking file operation |
---|
2242 | Notcheckingfile = ['draw_2D_shad_cont', 'draw_2D_shad_cont_time', \ |
---|
2243 | 'draw_2D_shad_line', 'draw_2D_shad_line_time', 'draw_topo_geogrid_boxes', \ |
---|
2244 | 'draw_trajectories', 'draw_vals_trajectories', 'variable_values'] |
---|
2245 | |
---|
2246 | ####### ###### ##### #### ### ## # |
---|
2247 | errormsg='ERROR -- error -- ERROR -- error' |
---|
2248 | |
---|
2249 | varn=opts.varname |
---|
2250 | oper=opts.operation |
---|
2251 | |
---|
2252 | if opts.ncfile is not None and not os.path.isfile(opts.ncfile) and \ |
---|
2253 | not drw.searchInlist(Notcheckingfile, oper): |
---|
2254 | print errormsg |
---|
2255 | print ' ' + main + ': File ' + opts.ncfile + ' does not exist !!' |
---|
2256 | quit(-1) |
---|
2257 | |
---|
2258 | if oper == 'create_movie': |
---|
2259 | create_movie(opts.ncfile, opts.values, opts.varname) |
---|
2260 | elif oper == 'draw_2D_shad': |
---|
2261 | draw_2D_shad(opts.ncfile, opts.values, opts.varname) |
---|
2262 | elif oper == 'draw_2D_shad_time': |
---|
2263 | draw_2D_shad_time(opts.ncfile, opts.values, opts.varname) |
---|
2264 | elif oper == 'draw_2D_shad_cont': |
---|
2265 | draw_2D_shad_cont(opts.ncfile, opts.values, opts.varname) |
---|
2266 | elif oper == 'draw_2D_shad_cont_time': |
---|
2267 | draw_2D_shad_cont_time(opts.ncfile, opts.values, opts.varname) |
---|
2268 | elif oper == 'draw_2D_shad_line': |
---|
2269 | draw_2D_shad_line(opts.ncfile, opts.values, opts.varname) |
---|
2270 | elif oper == 'draw_2D_shad_line_time': |
---|
2271 | draw_2D_shad_line_time(opts.ncfile, opts.values, opts.varname) |
---|
2272 | elif oper == 'draw_Neighbourghood_evol': |
---|
2273 | draw_Neighbourghood_evol(opts.ncfile, opts.values, opts.varname) |
---|
2274 | elif oper == 'draw_lines': |
---|
2275 | draw_lines(opts.ncfile, opts.values, opts.varname) |
---|
2276 | elif oper == 'draw_timeSeries': |
---|
2277 | draw_timeSeries(opts.ncfile, opts.values, opts.varname) |
---|
2278 | elif oper == 'draw_topo_geogrid': |
---|
2279 | draw_topo_geogrid(opts.ncfile, opts.values) |
---|
2280 | elif oper == 'draw_topo_geogrid_boxes': |
---|
2281 | draw_topo_geogrid_boxes(opts.ncfile, opts.values) |
---|
2282 | elif oper == 'draw_trajectories': |
---|
2283 | draw_trajectories(opts.ncfile, opts.values, opts.varname) |
---|
2284 | elif oper == 'draw_vals_trajectories': |
---|
2285 | draw_vals_trajectories(opts.ncfile, opts.values, opts.varname) |
---|
2286 | elif oper == 'list_graphics': |
---|
2287 | # From: http://www.diveintopython.net/power_of_introspection/all_together.html |
---|
2288 | import drawing as myself |
---|
2289 | object = myself |
---|
2290 | for opern in namegraphics: |
---|
2291 | if opern != 'list_graphics': |
---|
2292 | print opern + '_______ ______ _____ ____ ___ __ _' |
---|
2293 | print getattr(object, opern).__doc__ |
---|
2294 | elif oper == 'variable_values': |
---|
2295 | variable_values(opts.values) |
---|
2296 | else: |
---|
2297 | print errormsg |
---|
2298 | print ' ' + main + ": the graphic '" + oper + "' is not ready !!" |
---|
2299 | print errormsg |
---|
2300 | quit() |
---|