Context Navigation

← Previous Revision
Latest Revision
Next Revision →
Blame
Revision Log

regtest.csh @ 1

Last change on this file since 1 was 1, checked in by lfita, 10 years ago

-- --- Opening of the WRF+LMDZ coupling repository --- -- -

WRF: version v3.3
LMDZ: version v1818

More details in:

File size: 150.2 KB

Line
1	#!/bin/csh
2
3	#BSUB -a poe # at NCAR: bluevista
4	#BSUB -R "span[ptile=32]" # how many tasks per node (up to 8)
5	#BSUB -n 4 # number of total tasks
6	#BSUB -o reg.out # output filename (%J to add job id)
7	#BSUB -e reg.err # error filename
8	#BSUB -J regtest1 # job name
9	#BSUB -q share # queue
10	#BSUB -W 6:00 # wallclock time
11	#BSUB -P 64000400
12	##BSUB -P 66770001
13
14	# This is a script to test the bit-for-bit reproducibility of
15	# the WRF model, when comparing single processor serial runs to
16	# OpenMP and MPI parallel runs. There are several regression tests
17	# that are performed. Failed comparisons get reported, but don't
18	# stop the script. Failed builds force an exit from the script.
19
20	setenv WRF_NMM_NEST 1
21	set WHERE_AM_I = `pwd`
22
23	if ( `uname` == AIX ) then
24
25	set USE_SPECIAL_XLF = TRUE
26
27	if ( $USE_SPECIAL_XLF == TRUE ) then
28	xlf -qversion
29	source ~gill/sourceme_modules
30	#module load xlf/12.01.0000.0005.091127
31	#module load xlf/12.01.0000.0005
32	module load xlf/84213
33	xlf -qversion
34
35	set VERSION = `xlf -qversion \| grep AIX \| cut -f2 -d, \| cut -f2 -dV \| cut -f1 -d.`
36	if ( $VERSION != 12 ) then
37	echo wrong xlf version $VERSION
38	exit
39	else
40	echo right xlf version $VERSION
41	endif
42	endif
43
44	set tdir = 1
45	if ( ! -d /ptmp/${USER}/${tdir} ) then
46	mkdir /ptmp/${USER}/${tdir}
47	endif
48	endif
49
50	# Do we keep running even when there are BAD failures?
51
52	set KEEP_ON_RUNNING = FALSE
53	set KEEP_ON_RUNNING = TRUE
54
55	# These need to be changed for your particular set of runs. This is
56	# where email gets sent.
57
58	if ( ( `uname` == AIX ) && ( ( `hostname \| cut -c 1-2` != bs ) && \
59	( `hostname \| cut -c 1-2` != bv ) && ( `hostname \| cut -c 1-2` != be ) ) ) then
60	set FAIL_MAIL = ( ${user}@noaa.gov )
61	set GOOD_MAIL = ( ${user}@noaa.gov )
62
63	setenv MP_EAGER_LIMIT 65536
64	setenv MP_SHARED_MEMORY yes
65	setenv MP_SINGLE_THREAD yes
66	setenv MP_LABELIO yes
67	setenv MP_STDOUTMODE ordered
68
69	setenv OMP_NUM_THREADS 4
70	setenv XLSMPOPTS "parthds=4:spins=0:yields=0:stack=128000000:schedule=static"
71	setenv AIXTHREAD_SCOPE S
72	setenv AIXTHREAD_MNRATIO 1:1
73	setenv SPINLOOPTIME 1000
74	setenv YIELDLOOPTIME 1000
75	else
76	set FAIL_MAIL = ( ${user}@ucar.edu )
77	set GOOD_MAIL = ( ${user}@ucar.edu )
78	endif
79
80	unalias cd cp rm ls pushd popd mv
81	if ( ( `uname` == Linux ) \|\| ( `uname` == Darwin ) ) alias banner echo
82
83	# Get the command line input
84
85	set thedate = -999
86	set thefile = "null"
87	set thedata = "null"
88	set clrm = 0 # compile local run mmmtmp, for using clsroom cluster and local disk
89
90	# If this is a batch job (NCAR's IBMs or FSL's Intel and Alpha), we need to muck with the "input"
91	# parameters a bit.
92
93	if ( ( `uname` == AIX ) \|\| ( `hostname` == tempest ) \|\| ( `hostname \| cut -c 1-2` == ln ) ) then
94	set argv = ( -here )
95	set argv = ( -ftp )
96	set argv = ( -D today )
97	set argv = ( -env )
98	set WRFREGFILE = /mmm/users/gill/wrf.tar
99	if ( ( `uname` == AIX ) && ( ( `hostname \| cut -c 1-2` != bs ) && \
100	( `hostname \| cut -c 1-2` != bv ) && ( `hostname \| cut -c 1-2` != be ) ) ) then
101	set argv = ( -f /nbns/meso/wx22tb/regression_tests/wrf.tar )
102	else
103	set argv = ( -f wrf.tar )
104	endif
105	endif
106
107	# Where is the input data located - for a few known NCAR/MMM machines.
108
109	if ( ( `hostname` == master ) \|\| (`hostname \| cut -c 1-4` == node ) ) then
110	set WRFREGDATAEM = /big/users/gill/WRF-data-EM
111	set WRFREGDATANMM = /big/users/gill/WRF-data-NMM
112	else if ( `hostname` == jacaranda ) then
113	set WRFREGDATAEM = /jacaranda/users/gill/WRF-data-EM
114	set WRFREGDATANMM = /jacaranda/users/gill/WRF-data-NMM
115	else if ( `hostname` == basswood ) then
116	set WRFREGDATAEM = /basswood/gill/Regression_Tests/WRF_regression_data/processed
117	set WRFREGDATANMM = /basswood/gill/Regression_Tests/WRF_regression_data/WRF-data-NMM_new
118	else if ( `hostname` == stink ) then
119	set WRFREGDATAEM = /stink/gill/Regression_Tests/WRF_regression_data/processed
120	set WRFREGDATANMM = /stink/gill/Regression_Tests/WRF_regression_data/WRF-data-NMM_new
121	else if ( `hostname` == cape ) then
122	set WRFREGDATAEM = /cape/users/michalak/WRF-data-EM
123	set WRFREGDATANMM = /cape/users/michalak/WRF-data-NMM
124	else if ( (`hostname \| cut -c 1-6` == joshua ) \|\| \
125	( `hostname` == maple ) \|\| (`hostname \| cut -c 1-7` == service ) ) then
126	set WRFREGDATAEM = /users/gill/WRF-data-EM
127	set WRFREGDATANMM = /users/gill/WRF-data-NMM
128	else if ( ( `hostname \| cut -c 1-2` == bs ) \|\| ( `hostname` == tempest ) \|\| ( `hostname \| cut -c 1-2` == ln ) \|\| \
129	( `hostname \| cut -c 1-2` == bv ) \|\| ( `hostname \| cut -c 1-2` == be ) ) then
130	set WRFREGDATAEM = /mmm/users/gill/WRF-data-EM
131	set WRFREGDATAEM = /mmm/users/gill/WRF_regression_data/processed
132	set WRFREGDATANMM = /mmm/users/gill/WRF-data-NMM_new
133	else if ( ( `uname` == AIX ) && ( ( `hostname \| cut -c 1-2` != bs ) && \
134	( `hostname \| cut -c 1-2` != bv ) && ( `hostname \| cut -c 1-2` != be ) ) ) then
135	set WRFREGDATAEM = /nbns/meso/wx22tb/regression_tests/WRF-data-EM
136	set WRFREGDATANMM = /nbns/meso/wx22tb/regression_tests/WRF-data-NMM
137	else
138	if ( ( -d /users/gill/WRF-data-EM ) && ( -d /users/gill/WRF-data-NMM ) ) then
139	set WRFREGDATAEM = /users/gill/WRF-data-EM
140	set WRFREGDATANMM = /users/gill/WRF-data-NMM
141	else if ( ( -d /mmm/users/gill/WRF-data-EM ) && ( -d /mmm/users/gill/WRF-data-NMM ) ) then
142	set WRFREGDATAEM = /mmm/users/gill/WRF-data-EM
143	set WRFREGDATANMM = /mmm/users/gill/WRF-data-NMM
144	else
145	echo "stick the WRF em and nmm data somewhere, and then fill in the shell vars"
146	echo "inside this script, you NEED WRFREGDATAEM and WRFREGDATANMM set"
147	exit ( 1 )
148	endif
149	endif
150	#DAVE###################################################
151	echo DAVE em data is located at $WRFREGDATAEM
152	ls -ls $WRFREGDATAEM
153	echo DAVE nmm data is located at $WRFREGDATANMM
154	ls -ls $WRFREGDATANMM
155	banner 1
156	#set ans = "$<"
157	#DAVE###################################################
158
159	if ( $#argv == 0 ) then
160	echo "Please enter either a date for cvs checkout. ex regtest.csh -D date"
161	echo " or a file name containing WRF. ex regtest.csh -f tarfile"
162	echo " or the -ftp flag for the script to pick code off anon ftp"
163	exit ( 2 )
164	endif
165
166	set theargs = 0
167	foreach a ( $argv )
168	if ( "$a" == "-D" ) then
169
170	rsh -n maple.mmm.ucar.edu w >& /dev/null
171	if ( $status ) then
172	echo "Cannot execute a remote shell on maple.mmm.ucar.edu, where the"
173	echo "WRF code resides."
174	echo "Please check that it is up and that you have permission to rsh"
175	echo "to this host. (Create a .rhosts file)."
176	ping -c 1 maple.mmm.ucar.edu
177	exit 2
178	endif
179	setenv CVSROOT maple.mmm.ucar.edu:/data3/mp/wrfhelp/WRF
180
181	set acquire_from = "cvs"
182	set thedate = $argv[2]
183
184	endif
185
186	if ( "$a" == "-f" ) then
187
188	set thefile = $argv[2]
189	# Check for absolute path, if not, make it absolute
190	echo $thefile \| grep '^/' > /dev/null
191	if ( $status != 0 ) set thefile = `pwd`/$thefile
192	set acquire_from = "filearg"
193
194	endif
195
196	if ( "$a" == "-ftp" ) then
197	set acquire_from = "ftp"
198	echo "anon ftp temporarily disabled"
199	exit ( 3 )
200	endif
201
202	if ( "$a" == "-here" ) then
203	set acquire_from = "here"
204	endif
205
206	if ( "$a" == "-env" ) then
207	set acquire_from = "environment"
208	set thefile = $WRFREGFILE
209	endif
210	end
211
212	# Start recording everything - for debug purposes.
213
214	set echo
215	set date
216
217	# And to tell us how long we've spent on this whole regression test,
218	# we should remember when we started.
219
220	set start = ( `date` )
221
222	#####################################################################
223
224	# Initial set up values
225
226	# Is this a single domain regression test or is this nested. Well, a nested one
227	# is a bit special. It can only run on machines that have the WRF RSL_LITE-but-no-MPI
228	# option available.
229
230	set NESTED1 = TRUE
231	set NESTED1 = FALSE
232
233	set NESTED2 = TRUE
234	set NESTED2 = FALSE
235
236	if ( ( $NESTED1 == TRUE ) \|\| ( $NESTED2 == TRUE ) ) then
237	echo DOING a NESTED TEST
238	set NESTED = TRUE
239	else
240	set NESTED = FALSE
241	endif
242
243	# Use the adaptive time step option
244
245	set ADAPTIVE = TRUE
246	set ADAPTIVE = FALSE
247
248	if ( $ADAPTIVE == TRUE ) then
249	set STEP_TO_OUTPUT_TIME = .TRUE.
250	set USE_ADAPTIVE_TIME_STEP = .TRUE.
251	else
252	set STEP_TO_OUTPUT_TIME = .FALSE.
253	set USE_ADAPTIVE_TIME_STEP = .FALSE.
254	endif
255
256	# We can choose to do grid and obs nudging tests.
257
258	set FDDA = TRUE
259	set FDDA = FALSE
260
261	set FDDA2 = TRUE
262	set FDDA2 = FALSE
263
264	if ( $FDDA2 == TRUE ) then
265	set FDDA = TRUE
266	endif
267
268	# The default floating point precision is either 4 bytes or 8 bytes.
269	# We assume that it is 4 (or the default for the architecture) unless
270	# REAL8 is set to TRUE.
271
272	set REAL8 = TRUE
273	set REAL8 = FALSE
274
275	# Are we shooting for a bit-for-bit run (serial vs OpenMP, serial vs MPI), or not?
276	# If you want to do a performance-only run, the forecasts are still short, but you
277	# get to insure that the optimized code builds and runs.
278
279	set REG_TYPE = OPTIMIZED
280	set REG_TYPE = BIT4BIT
281
282	# For a Mac/Intel, we can run either g95 or PGI.
283
284	if ( ( `uname` == Darwin ) \|\| ( `uname` == Linux ) ) then
285	set LINUX_COMP = G95
286	set LINUX_COMP = PGI
287	endif
288
289	# We can choose to do a global test
290
291	if ( $NESTED != TRUE ) then
292	set GLOBAL = TRUE
293	set GLOBAL = FALSE
294	else if ( $NESTED == TRUE ) then
295	set GLOBAL = FALSE
296	endif
297
298	# Is this a WRF chem test?
299	# if CHEM = TRUE, then chemistry run
300	# if KPP = TRUE, then chemistry with KPP run (CHEM set to true)
301
302	if ( $NESTED != TRUE ) then
303	set KPP = TRUE
304	set KPP = FALSE
305	set CHEM = TRUE
306	set CHEM = FALSE
307	if ( $KPP == TRUE ) then
308	set CHEM = TRUE
309	endif
310	else if ( $NESTED == TRUE ) then
311	set CHEM = FALSE
312	set KPP = FALSE
313	endif
314	if ( $CHEM == TRUE ) then
315	setenv WRF_CHEM 1
316	else if ( $CHEM == FALSE ) then
317	setenv WRF_CHEM 0
318	endif
319	if ( $KPP == TRUE ) then
320	setenv WRF_KPP 1
321	setenv FLEX_LIB_DIR /usr/local/lib
322	setenv YACC "/usr/bin/yacc -d"
323	set CHEM_OPT = 104
324	else if ( $KPP == FALSE ) then
325	setenv WRF_KPP 0
326	setenv FLEX_LIB_DIR
327	setenv YACC "/usr/bin/yacc -d"
328	set CHEM_OPT =
329	endif
330
331	# For the real data case, we can run either one of two data cases. If this is
332	# a chemistry run, we are forced to use that data.
333
334	set dataset = jun01
335	set dataset = jan00
336	if ( $CHEM == TRUE ) then
337	set dataset = chem
338	endif
339	if ( $GLOBAL == TRUE ) then
340	set dataset = global
341	endif
342
343	# Yet another local variable to change the name of where the data is located.
344
345	set thedataem = ${WRFREGDATAEM}/${dataset}
346	set thedatanmm = $WRFREGDATANMM
347
348	# A separately installed version of the latest ESMF library (NOT the
349	# ESMF library included in the WRF tarfile) can be tested by setting
350	# "ESMF_LIB" to "TRUE" below. This test is not supported on all
351	# machines.
352
353	set ESMF_LIB = TRUE
354	set ESMF_LIB = FALSE
355
356	# serial and OMP are not tested with ESMF so always start with env vars cleared
357	unsetenv ESMFLIB
358	unsetenv ESMFINC
359
360	if ( $ESMF_LIB == TRUE ) then
361	if ( ( `uname` == AIX ) && ( ( `hostname \| cut -c 1-2` == bv ) \|\| ( `hostname \| cut -c 1-2` == be ) ) ) then
362	echo "A separately installed version of the latest ESMF library"
363	echo "(NOT the ESMF library included in the WRF tarfile) will"
364	echo "be used for MPI tests"
365	setenv OBJECT_MODE 64
366	# set ESMFLIBSAVE = /home/bluevista/hender/esmf/esmf_2_2_2r/lib/libO/AIX.default.64.mpi.default
367	# set ESMFINCSAVE = /home/bluevista/hender/esmf/esmf_2_2_2r/mod/modO/AIX.default.64.mpi.default
368	set NEVER = FALSE
369	if ( $NEVER == TRUE ) then
370	setenv ESMF_DIR /mmm/users/michalak/esmf
371	setenv ESMF_BOPT g
372	setenv ESMF_ABI 64
373	setenv ESMF_INSTALL_PREFIX $ESMF_DIR/../esmf_install
374	setenv ESMFLIB $ESMF_INSTALL_PREFIX/lib/libg/AIX.default.64.mpi.default
375	setenv ESMFINC $ESMF_INSTALL_PREFIX/mod/modg/AIX.default.64.mpi.default
376	else
377	source ~michalak/sourceme_esmf
378	endif
379	set ESMFLIBSAVE = $ESMFLIB
380	set ESMFINCSAVE = $ESMFINC
381	echo "Using ESMFLIB = ${ESMFLIBSAVE}"
382	echo "Using ESMFINC = ${ESMFINCSAVE}"
383	else
384	echo "Only the ESMF library included in the WRF tarfile is"
385	echo "tested on this machine"
386	exit ( 3 )
387	endif
388	if ( $NESTED == TRUE ) then
389	echo "The ESMF library does not work with nesting."
390	exit ( 3 )
391	endif
392	endif
393
394	# A single WRF output "quilt" server can be tested by setting "QUILT" to
395	# "TRUE" below. At the moment, testing of I/O quilt servers is not supported
396	# on all machines.
397
398	set QUILT = TRUE
399	set QUILT = FALSE
400
401	if ( $QUILT == TRUE ) then
402	echo "One WRF output quilt server will be used for some tests"
403	endif
404
405	# Baseline data sets can be generated and archived or compared against.
406	# - To generate and archive, set GENERATE_BASELINE to a pathname that can
407	# be created by this script via "mkdir -p $GENERATE_BASELINE". This
408	# directory must not already exist.
409	# Set GENERATE_BASELINE = FALSE to avoid baseline generation.
410	# - To compare with a previously archived baseline, set COMPARE_BASELINE
411	# to an existing directory that contains an archived baseline.
412	# Set COMPARE_BASELINE = FALSE to avoid baseline comparison.
413	set GENERATE_BASELINE = FALSE
414	set COMPARE_BASELINE = FALSE
415
416	# Baseline generation and comparison are only done when BIT4BIT is set.
417	if ( $GENERATE_BASELINE != FALSE ) then
418	if ( $REG_TYPE != BIT4BIT ) then
419	echo "ERROR: Baseline generation can only be done during BIT4BIT tests."
420	exit ( 3 )
421	endif
422	if ( -d $GENERATE_BASELINE ) then
423	echo "ERROR: Baseline directory ${GENERATE_BASELINE} already exists."
424	exit ( 3 )
425	else
426	# Archive serial output file to baseline
427	mkdir -p $GENERATE_BASELINE \|\| ( echo "ERROR: cannot mkdir ${GENERATE_BASELINE}"; exit 3 )
428	endif
429	endif
430	if ( $COMPARE_BASELINE != FALSE ) then
431	if ( $REG_TYPE != BIT4BIT ) then
432	echo "Baseline comparison can only be done during BIT4BIT tests."
433	exit ( 3 )
434	endif
435	if ( ! -d $COMPARE_BASELINE ) then
436	echo "${0}: ERROR: Baseline directory ${COMPARE_BASELINE} does not exist"
437	exit ( 3 )
438	endif
439	endif
440
441	# Set the input/output format type (currently 1, 2 or 5 OK).
442	# Binary NetCDF PHDF, IBM GriB, history only
443	# 1 2 3 4 5
444
445	set IO_FORM = 2
446	set IO_FORM_NAME = ( io_bin io_netcdf io_dummy io_phdf5 io_grib1 )
447	set IO_FORM_WHICH =( IO IO IO IO O )
448
449	# There is a breakdown of cores to test depending on the various
450	# options that the user is testing.
451	# nested: cannot test NMM
452	# rsl_lite: cannot test anything with y periodic bc
453	# chem: em_real only
454	# esmf_lib: cannot test NMM
455	# grib output: cannot test NMM
456
457	if ( $NESTED1 == TRUE ) then
458	set CORES = ( em_real )
459	else if ( $NESTED2 == TRUE ) then
460	set CORES = ( em_b_wave em_quarter_ss )
461	else if ( $NESTED != TRUE ) then
462	set CORES = ( em_real em_b_wave em_quarter_ss nmm_real )
463	if ( $CHEM == TRUE ) then
464	set CORES = ( em_real em_real )
465	endif
466	if ( $GLOBAL == TRUE ) then
467	set CORES = ( em_real )
468	endif
469	if ( $ADAPTIVE == TRUE ) then
470	set CORES = ( em_real )
471	endif
472	if ( $ESMF_LIB == TRUE ) then
473	set CORES = ( em_real em_b_wave em_quarter_ss )
474	endif
475	if ( $IO_FORM_NAME[$IO_FORM] == io_grib1 ) then
476	set CORES = ( em_real em_b_wave em_quarter_ss )
477	endif
478	if ( $FDDA == TRUE ) then
479	set CORES = ( em_real )
480	endif
481	endif
482
483	# The b_wave case has binary input (4-byte only), the nmm
484	# core has raw MPI calls, skip them if we are doing real*8 floats.
485
486	if ( $REAL8 == TRUE ) then
487	set CORES = ( em_real em_quarter_ss )
488	endif
489
490	if ( ( $CHEM != TRUE ) && ( $FDDA != TRUE ) && ( $REAL8 != TRUE ) && ( $GLOBAL != TRUE ) && ( $ADAPTIVE != TRUE ) ) then
491	set PHYSOPTS = ( 1 2 3 4 5 6 7 8 10 11 13 14 15 )
492	else if ( $ADAPTIVE == TRUE ) then
493	set PHYSOPTS = ( 1 2 3 5 7 8 9 10 12 13 15 )
494	else if ( ( $CHEM != TRUE ) && ( $FDDA != TRUE ) && ( ( $REAL8 == TRUE ) \|\| ( $GLOBAL == TRUE ) ) ) then
495	set PHYSOPTS = ( 1 2 3 4 5 6 )
496	else if ( ( $CHEM != TRUE ) && ( $FDDA == TRUE ) ) then
497	if ( $FDDA2 == TRUE ) then
498	set PHYSOPTS_FDDA = BOTH
499	else
500	set PHYSOPTS_FDDA = GRID
501	endif
502	if ( $PHYSOPTS_FDDA == GRID ) then
503	set PHYSOPTS = ( 1 )
504	else
505	set PHYSOPTS = ( 1 2 3 4 5 )
506	endif
507	else if ( $CHEM == TRUE ) then
508	set PHYSOPTS = ( 1 2 3 4 5 6 )
509	endif
510
511	# This is selecting the ideal physics options - mostly selecting BC options.
512	# With no nesting, run all three ideal physics options.
513
514	if ( $NESTED == TRUE ) then
515	set Max_Ideal_Physics_Options = 5
516	else if ( $NESTED != TRUE ) then
517	set Max_Ideal_Physics_Options = 5
518	endif
519
520	set CUR_DIR = `pwd`
521
522	# How many domains to run (nest tests). Only em_real and ideals use this.
523	# The max is 3 due to the number of columns in the namelist that are
524	# currently filled in.
525
526	if ( $NESTED == TRUE ) then
527	if ( $dataset == jan00 ) then
528	cat >! dom_real << EOF
529	time_step = 180,
530	time_step_fract_num = 0,
531	time_step_fract_den = 1,
532	max_dom = 2,
533	s_we = 1, 1, 1,
534	e_we = 74, 31, 31,
535	s_sn = 1, 1, 1,
536	e_sn = 61, 31, 31,
537	s_vert = 1, 1, 1,
538	e_vert = 28, 28, 28,
539	p_top_requested = 5000,
540	num_metgrid_levels = 27,
541	num_metgrid_soil_levels = 4,
542	dx = 30000, 10000, 3333.333333,
543	dy = 30000, 10000, 3333.333333,
544	grid_id = 1, 2, 3,
545	parent_id = 0, 1, 2,
546	i_parent_start = 0, 31, 11,
547	j_parent_start = 0, 17, 11,
548	parent_grid_ratio = 1, 3, 3,
549	parent_time_step_ratio = 1, 3, 3,
550	feedback = 1,
551	smooth_option = 0
552	num_moves = 3
553	move_id = 2 , 2 , 2
554	move_interval = 3 , 6 , 9
555	move_cd_x = 1 , 1 , 1
556	move_cd_y = 1 , 1 , 1
557	use_adaptive_time_step = $USE_ADAPTIVE_TIME_STEP
558	step_to_output_time = $STEP_TO_OUTPUT_TIME
559	EOF
560	else if ( $dataset == jun01 ) then
561	cat >! dom_real << EOF
562	time_step = 60,
563	time_step_fract_num = 0,
564	time_step_fract_den = 1,
565	max_dom = 2,
566	s_we = 1, 1, 1,
567	e_we = 91, 31, 31,
568	s_sn = 1, 1, 1,
569	e_sn = 82, 31, 31,
570	s_vert = 1, 1, 1,
571	e_vert = 28, 28, 28,
572	p_top_requested = 5000,
573	num_metgrid_levels = 27,
574	num_metgrid_soil_levels = 4,
575	dx = 10000, 3333.333333, 1111.111111,
576	dy = 10000, 3333.333333, 1111.111111,
577	grid_id = 1, 2, 3,
578	parent_id = 0, 1, 2,
579	i_parent_start = 0, 30, 11,
580	j_parent_start = 0, 20, 11,
581	parent_grid_ratio = 1, 3, 3,
582	parent_time_step_ratio = 1, 3, 3,
583	feedback = 1,
584	smooth_option = 0
585	num_moves = 3
586	move_id = 2 , 2 , 2
587	move_interval = 1 , 2 , 3
588	move_cd_x = 1 , 1 , 1
589	move_cd_y = 1 , 1 , 1
590	use_adaptive_time_step = $USE_ADAPTIVE_TIME_STEP
591	step_to_output_time = $STEP_TO_OUTPUT_TIME
592	EOF
593	endif
594	cat >! dom_ideal << EOF
595	max_dom = 2,
596	EOF
597	else if ( $NESTED != TRUE ) then
598	if ( $dataset == jan00 ) then
599	cat >! dom_real << EOF
600	time_step = 180,
601	time_step_fract_num = 0,
602	time_step_fract_den = 1,
603	max_dom = 1,
604	s_we = 1, 1, 1,
605	e_we = 74, 31, 31,
606	s_sn = 1, 1, 1,
607	e_sn = 61, 31, 31,
608	s_vert = 1, 1, 1,
609	e_vert = 28, 28, 28,
610	p_top_requested = 5000,
611	num_metgrid_levels = 27,
612	num_metgrid_soil_levels = 4,
613	dx = 30000, 10000, 3333,
614	dy = 30000, 10000, 3333,
615	grid_id = 1, 2, 3,
616	parent_id = 0, 1, 2,
617	i_parent_start = 0, 31, 30,
618	j_parent_start = 0, 17, 30,
619	parent_grid_ratio = 1, 3, 3,
620	parent_time_step_ratio = 1, 3, 3,
621	feedback = 1,
622	smooth_option = 0
623	use_adaptive_time_step = $USE_ADAPTIVE_TIME_STEP
624	step_to_output_time = $STEP_TO_OUTPUT_TIME
625	EOF
626	else if ( $dataset == jun01 ) then
627	cat >! dom_real << EOF
628	time_step = 60,
629	time_step_fract_num = 0,
630	time_step_fract_den = 1,
631	max_dom = 1,
632	s_we = 1, 1, 1,
633	e_we = 91, 31, 31,
634	s_sn = 1, 1, 1,
635	e_sn = 82, 31, 31,
636	s_vert = 1, 1, 1,
637	e_vert = 28, 28, 28,
638	p_top_requested = 5000,
639	num_metgrid_levels = 27,
640	num_metgrid_soil_levels = 4,
641	dx = 10000, 3333.333333, 1111.111111,
642	dy = 10000, 3333.333333, 1111.111111,
643	grid_id = 1, 2, 3,
644	parent_id = 0, 1, 2,
645	i_parent_start = 0, 30, 11,
646	j_parent_start = 0, 20, 11,
647	parent_grid_ratio = 1, 3, 3,
648	parent_time_step_ratio = 1, 3, 3,
649	feedback = 1,
650	smooth_option = 0
651	use_adaptive_time_step = $USE_ADAPTIVE_TIME_STEP
652	step_to_output_time = $STEP_TO_OUTPUT_TIME
653	EOF
654	else if ( $dataset == global ) then
655	cat >! dom_real << EOF
656	time_step = 600
657	time_step_fract_num = 00
658	time_step_fract_den = 112
659	max_dom = 1,
660	s_we = 1, 1, 1,
661	e_we = 65, 41, 41,
662	s_sn = 1, 1, 1,
663	e_sn = 33, 81, 81,
664	s_vert = 1, 1, 1,
665	e_vert = 41, 41, 41,
666	p_top_requested = 5000,
667	num_metgrid_levels = 27,
668	num_metgrid_soil_levels = 4,
669	dx = 625373.288,20000, 4000,
670	dy = 625373.288,20000, 4000,
671	p_top_requested = 5000
672	grid_id = 1, 2, 3,
673	parent_id = 0, 1, 2,
674	i_parent_start = 0, 17, 17,
675	j_parent_start = 0, 33, 33,
676	parent_grid_ratio = 1, 5, 5,
677	parent_time_step_ratio = 1, 5, 5,
678	feedback = 1,
679	smooth_option = 00
680	EOF
681	endif
682	cat >! dom_ideal << EOF
683	max_dom = 1,
684	EOF
685	endif
686
687	# The em_real entire physics namelist. Change what you want.
688
689	cat >! phys_real_1 << EOF
690	mp_physics = 1, 1, 1,
691	ra_lw_physics = 1, 1, 1,
692	ra_sw_physics = 1, 1, 1,
693	radt = 21, 21, 21,
694	sf_sfclay_physics = 1, 1, 1,
695	sf_surface_physics = 1, 1, 1,
696	bl_pbl_physics = 1, 1, 1,
697	bldt = 0, 0, 0,
698	cu_physics = 1, 1, 0,
699	cudt = 5, 5, 5,
700	omlcall = 1,
701	oml_hml0 = 50,
702	oml_gamma = 0.14
703	slope_rad = 1, 1, 1,
704	topo_shading = 0, 0, 0,
705	isfflx = 1,
706	ifsnow = 0,
707	icloud = 1,
708	surface_input_source = 1,
709	num_soil_layers = 5,
710	mp_zero_out = 0,
711	EOF
712
713	cat >! dyn_real_SAFE << EOF
714	moist_adv_opt = 0, 0, 0,
715	scalar_adv_opt = 0, 0, 0,
716	chem_adv_opt = 0, 0, 0,
717	tke_adv_opt = 0, 0, 0,
718	EOF
719
720	cat >! dyn_real_1 << EOF
721	moist_adv_opt = 1, 1, 1,
722	scalar_adv_opt = 1, 1, 1,
723	chem_adv_opt = 0, 0, 0,
724	tke_adv_opt = 0, 0, 0,
725	EOF
726
727	cat >! time_real_1 << EOF
728	auxinput1_inname = "met_em.d<domain>.<date>"
729	EOF
730
731	cat >! nest_real_1 << EOF
732	input_from_file = .true.,.false.,.false.
733	EOF
734
735	cat >! damp_real_1 << EOF
736	damp_opt = 0,
737	zdamp = 5000., 5000., 5000.,
738	dampcoef = 0.05, 0.05, 0.05
739	EOF
740
741	cat >! phys_real_2 << EOF
742	mp_physics = 2, 2, 2,
743	ra_lw_physics = 3, 3, 3,
744	ra_sw_physics = 3, 3, 3,
745	radt = 21, 21, 21,
746	sf_sfclay_physics = 2, 2, 2,
747	sf_surface_physics = 2, 2, 2,
748	bl_pbl_physics = 2, 2, 2,
749	bldt = 0, 0, 0,
750	cu_physics = 2, 2, 0,
751	cudt = 5, 5, 5,
752	omlcall = 1,
753	oml_hml0 = 50,
754	oml_gamma = 0.14
755	isfflx = 1,
756	ifsnow = 0,
757	icloud = 1,
758	surface_input_source = 1,
759	num_soil_layers = 4,
760	sf_urban_physics = 2, 2, 2,
761	mp_zero_out = 0,
762	levsiz = 59
763	paerlev = 29
764	cam_abs_freq_s = 21600
765	cam_abs_dim1 = 4
766	cam_abs_dim2 = 28
767	EOF
768
769	cat >! dyn_real_2 << EOF
770	moist_adv_opt = 1, 1, 1,
771	scalar_adv_opt = 1, 1, 1,
772	chem_adv_opt = 0, 0, 0,
773	tke_adv_opt = 0, 0, 0,
774	EOF
775
776	if ( $GLOBAL == TRUE ) then
777	cp dyn_real_SAFE dyn_real_2
778	endif
779
780	cat >! time_real_2 << EOF
781	auxinput1_inname = "met_em.d<domain>.<date>"
782	EOF
783
784	cat >! nest_real_2 << EOF
785	input_from_file = .true.,.false.,.false.
786	EOF
787
788	cat >! damp_real_2 << EOF
789	damp_opt = 1,
790	zdamp = 5000., 5000., 5000.,
791	dampcoef = 0.05, 0.05, 0.05
792	EOF
793
794	cat >! phys_real_3 << EOF
795	mp_physics = 3, 3, 3,
796	ra_lw_physics = 4, 4, 4,
797	ra_sw_physics = 4, 4, 4,
798	radt = 21, 21, 21,
799	sf_sfclay_physics = 4, 4, 4,
800	sf_surface_physics = 1, 1, 1,
801	bl_pbl_physics = 4, 4, 4,
802	bldt = 0, 0, 0,
803	cu_physics = 3, 3, 0,
804	cudt = 5, 5, 5,
805	isfflx = 1,
806	ifsnow = 0,
807	icloud = 1,
808	surface_input_source = 1,
809	num_soil_layers = 5,
810	mp_zero_out = 0,
811	maxiens = 1,
812	maxens = 3,
813	maxens2 = 3,
814	maxens3 = 16,
815	ensdim = 144,
816	EOF
817
818	cat >! dyn_real_3 << EOF
819	moist_adv_opt = 2, 2, 2,
820	scalar_adv_opt = 2, 2, 2,
821	chem_adv_opt = 0, 0, 0,
822	tke_adv_opt = 0, 0, 0,
823	EOF
824
825	cat >! time_real_3 << EOF
826	auxinput1_inname = "met_em.d<domain>.<date>"
827	EOF
828
829	cat >! nest_real_3 << EOF
830	input_from_file = .true.,.false.,.false.
831	EOF
832
833	cat >! damp_real_3 << EOF
834	damp_opt = 3,
835	zdamp = 5000., 5000., 5000.,
836	dampcoef = 0.05, 0.05, 0.05
837	EOF
838
839	cat >! phys_real_4 << EOF
840	mp_physics = 4, 4, 4,
841	ra_lw_physics = 1, 1, 1,
842	ra_sw_physics = 2, 2, 2,
843	radt = 21, 21, 21,
844	sf_sfclay_physics = 5, 5, 5,
845	sf_surface_physics = 2, 2, 2,
846	bl_pbl_physics = 5, 5, 5,
847	bldt = 0, 0, 0,
848	cu_physics = 4, 4, 0,
849	cudt = 0, 0, 0,
850	isfflx = 1,
851	ifsnow = 0,
852	icloud = 1,
853	surface_input_source = 1,
854	num_soil_layers = 4,
855	sf_urban_physics = 1, 1, 1,
856	mp_zero_out = 0,
857	EOF
858
859	cat >! dyn_real_4 << EOF
860	moist_adv_opt = 2, 2, 2,
861	scalar_adv_opt = 2, 2, 2,
862	chem_adv_opt = 0, 0, 0,
863	tke_adv_opt = 0, 0, 0,
864	EOF
865
866	cat >! time_real_4 << EOF
867	auxinput1_inname = "met_em.d<domain>.<date>"
868	EOF
869
870	cat >! nest_real_4 << EOF
871	input_from_file = .true.,.false.,.false.
872	EOF
873
874	cat >! damp_real_4 << EOF
875	damp_opt = 1,
876	zdamp = 5000., 5000., 5000.,
877	dampcoef = 0.05, 0.05, 0.05
878	EOF
879
880	cat >! phys_real_5 << EOF
881	mp_physics = 5, 5, 5,
882	ra_lw_physics = 5, 5, 5,
883	ra_sw_physics = 5, 5, 5,
884	radt = 21, 21, 21,
885	sf_sfclay_physics = 7, 7, 7,
886	sf_surface_physics = 7, 7, 7,
887	bl_pbl_physics = 7, 7, 7,
888	bldt = 0, 0, 0,
889	cu_physics = 5, 5, 0,
890	cudt = 0, 0, 0,
891	isfflx = 1,
892	ifsnow = 0,
893	icloud = 1,
894	surface_input_source = 1,
895	num_soil_layers = 2,
896	mp_zero_out = 0,
897	ishallow = 0,
898	EOF
899
900	cat >! dyn_real_5 << EOF
901	moist_adv_opt = 1, 1, 1,
902	scalar_adv_opt = 1, 1, 1,
903	chem_adv_opt = 0, 0, 0,
904	tke_adv_opt = 0, 0, 0,
905	EOF
906
907	cat >! time_real_5 << EOF
908	auxinput1_inname = "met_em.d<domain>.<date>"
909	EOF
910
911	cat >! nest_real_5 << EOF
912	input_from_file = .true.,.true.,.false.
913	EOF
914
915	cat >! damp_real_5 << EOF
916	damp_opt = 0,
917	zdamp = 5000., 5000., 5000.,
918	dampcoef = 0.05, 0.05, 0.05
919	EOF
920
921	cat >! phys_real_6 << EOF
922	mp_physics = 6, 6, 6,
923	ra_lw_physics = 4, 4, 4,
924	ra_sw_physics = 4, 4, 4,
925	radt = 21, 21, 21,
926	sf_sfclay_physics = 2, 2, 2,
927	sf_surface_physics = 1, 1, 1,
928	bl_pbl_physics = 8, 8, 8,
929	bldt = 0, 0, 0,
930	cu_physics = 6, 6, 0,
931	cudt = 0, 0, 0,
932	omlcall = 1,
933	oml_hml0 = 50,
934	oml_gamma = 0.14
935	isfflx = 1,
936	ifsnow = 0,
937	icloud = 1,
938	surface_input_source = 1,
939	num_soil_layers = 5,
940	mp_zero_out = 0,
941	EOF
942
943	cat >! dyn_real_6 << EOF
944	moist_adv_opt = 1, 1, 1,
945	scalar_adv_opt = 1, 1, 1,
946	chem_adv_opt = 0, 0, 0,
947	tke_adv_opt = 0, 0, 0,
948	EOF
949
950	cat >! time_real_6 << EOF
951	auxinput1_inname = "met_em.d<domain>.<date>"
952	EOF
953
954	cat >! nest_real_6 << EOF
955	input_from_file = .true.,.false.,.false.
956	EOF
957
958	cat >! damp_real_6 << EOF
959	damp_opt = 3,
960	zdamp = 5000., 5000., 5000.,
961	dampcoef = 0.05, 0.05, 0.05
962	EOF
963
964	cat >! phys_real_7 << EOF
965	mp_physics = 7, 7, 7,
966	ra_lw_physics = 1, 1, 1,
967	ra_sw_physics = 1, 1, 1,
968	radt = 21, 21, 21,
969	sf_sfclay_physics =10, 10, 10,
970	sf_surface_physics = 2, 2, 2,
971	bl_pbl_physics =10, 10, 10,
972	bldt = 0, 0, 0,
973	cu_physics =14, 14, 0,
974	cudt = 5, 5, 5,
975	omlcall = 1,
976	oml_hml0 = 50,
977	oml_gamma = 0.14
978	slope_rad = 0, 0, 0,
979	topo_shading = 0, 0, 0,
980	isfflx = 1,
981	ifsnow = 0,
982	icloud = 1,
983	surface_input_source = 1,
984	num_soil_layers = 4,
985	mp_zero_out = 0,
986	EOF
987
988	cat >! dyn_real_7 << EOF
989	moist_adv_opt = 2, 2, 2,
990	scalar_adv_opt = 2, 2, 2,
991	chem_adv_opt = 0, 0, 0,
992	tke_adv_opt = 0, 0, 0,
993	EOF
994
995	cat >! time_real_7 << EOF
996	auxinput1_inname = "met_em.d<domain>.<date>"
997	EOF
998
999	cat >! nest_real_7 << EOF
1000	input_from_file = .true.,.false.,.false.
1001	EOF
1002
1003	cat >! damp_real_7 << EOF
1004	damp_opt = 1,
1005	zdamp = 5000., 5000., 5000.,
1006	dampcoef = 0.05, 0.05, 0.05
1007	EOF
1008
1009	cat >! phys_real_8 << EOF
1010	mp_physics = 8, 8, 8,
1011	ra_lw_physics = 5, 5, 5,
1012	ra_sw_physics = 5, 5, 5,
1013	radt = 21, 21, 21,
1014	sf_sfclay_physics = 2, 2, 2,
1015	sf_surface_physics = 3, 3, 3,
1016	bl_pbl_physics = 9, 9, 9,
1017	bldt = 0, 0, 0,
1018	cu_physics = 7, 7, 0,
1019	cudt = 0, 0, 0,
1020	isfflx = 1,
1021	ifsnow = 0,
1022	icloud = 1,
1023	surface_input_source = 1,
1024	num_soil_layers = 6,
1025	mp_zero_out = 0,
1026	EOF
1027
1028	cat >! dyn_real_8 << EOF
1029	moist_adv_opt = 2, 2, 2,
1030	scalar_adv_opt = 2, 2, 2,
1031	chem_adv_opt = 0, 0, 0,
1032	tke_adv_opt = 0, 0, 0,
1033	EOF
1034
1035	cat >! time_real_8 << EOF
1036	auxinput1_inname = "met_em.d<domain>.<date>"
1037	EOF
1038
1039	cat >! nest_real_8 << EOF
1040	input_from_file = .true.,.false.,.false.
1041	EOF
1042
1043	cat >! damp_real_8 << EOF
1044	damp_opt = 3,
1045	zdamp = 5000., 5000., 5000.,
1046	dampcoef = 0.05, 0.05, 0.05
1047	EOF
1048
1049	cat >! phys_real_9 << EOF
1050	mp_physics = 9, 9, 9,
1051	ra_lw_physics = 3, 3, 3,
1052	ra_sw_physics = 3, 3, 3,
1053	radt = 21, 21, 21,
1054	sf_sfclay_physics = 5, 5, 5,
1055	sf_surface_physics = 3, 3, 3,
1056	bl_pbl_physics = 6, 6, 6,
1057	bldt = 0, 0, 0,
1058	cu_physics = 1, 1, 0,
1059	cudt = 0, 0, 0,
1060	isfflx = 1,
1061	ifsnow = 0,
1062	icloud = 1,
1063	surface_input_source = 1,
1064	num_soil_layers = 6,
1065	mp_zero_out = 0,
1066	levsiz = 59
1067	paerlev = 29
1068	cam_abs_freq_s = 21600
1069	cam_abs_dim1 = 4
1070	cam_abs_dim2 = 28
1071	EOF
1072
1073	cat >! dyn_real_9 << EOF
1074	moist_adv_opt = 1, 1, 1,
1075	scalar_adv_opt = 1, 1, 1,
1076	chem_adv_opt = 0, 0, 0,
1077	tke_adv_opt = 0, 0, 0,
1078	EOF
1079
1080	cat >! time_real_9 << EOF
1081	auxinput1_inname = "met_em.d<domain>.<date>"
1082	EOF
1083
1084	cat >! nest_real_9 << EOF
1085	input_from_file = .true.,.false.,.false.
1086	EOF
1087
1088	cat >! damp_real_9 << EOF
1089	damp_opt = 0,
1090	zdamp = 5000., 5000., 5000.,
1091	dampcoef = 0.05, 0.05, 0.05
1092	EOF
1093
1094	cat >! phys_real_10 << EOF
1095	mp_physics = 10, 10, 10,
1096	ra_lw_physics = 1, 1, 1,
1097	ra_sw_physics = 2, 2, 2,
1098	radt = 21, 21, 21,
1099	sf_sfclay_physics = 4, 4, 4,
1100	sf_surface_physics = 7, 7, 7,
1101	bl_pbl_physics = 4, 4, 4,
1102	bldt = 0, 0, 0,
1103	cu_physics = 2, 2, 0,
1104	cudt = 0, 0, 0,
1105	isfflx = 1,
1106	ifsnow = 0,
1107	icloud = 1,
1108	surface_input_source = 1,
1109	num_soil_layers = 2,
1110	mp_zero_out = 0,
1111	EOF
1112
1113	cat >! dyn_real_10 << EOF
1114	moist_adv_opt = 1, 1, 1,
1115	scalar_adv_opt = 1, 1, 1,
1116	chem_adv_opt = 0, 0, 0,
1117	tke_adv_opt = 0, 0, 0,
1118	EOF
1119
1120	cat >! time_real_10 << EOF
1121	auxinput1_inname = "met_em.d<domain>.<date>"
1122	EOF
1123
1124	cat >! nest_real_10 << EOF
1125	input_from_file = .true.,.true.,.false.
1126	EOF
1127
1128	cat >! damp_real_10 << EOF
1129	damp_opt = 3,
1130	zdamp = 5000., 5000., 5000.,
1131	dampcoef = 0.05, 0.05, 0.05
1132	EOF
1133
1134	cat >! phys_real_11 << EOF
1135	mp_physics = 14, 14, 14,
1136	ra_lw_physics = 3, 3, 3,
1137	ra_sw_physics = 3, 3, 3,
1138	radt = 21, 21, 21,
1139	sf_sfclay_physics = 7, 7, 7,
1140	sf_surface_physics = 1, 1, 1,
1141	bl_pbl_physics = 7, 7, 7,
1142	bldt = 0, 0, 0,
1143	cu_physics = 4, 4, 0,
1144	cudt = 0, 0, 0,
1145	isfflx = 1,
1146	ifsnow = 0,
1147	icloud = 1,
1148	surface_input_source = 1,
1149	num_soil_layers = 5,
1150	mp_zero_out = 0,
1151	levsiz = 59
1152	paerlev = 29
1153	cam_abs_freq_s = 21600
1154	cam_abs_dim1 = 4
1155	cam_abs_dim2 = 28
1156	EOF
1157
1158	cat >! dyn_real_11 << EOF
1159	moist_adv_opt = 2, 2, 2,
1160	scalar_adv_opt = 2, 2, 2,
1161	chem_adv_opt = 0, 0, 0,
1162	tke_adv_opt = 0, 0, 0,
1163	EOF
1164
1165	cat >! time_real_11 << EOF
1166	auxinput1_inname = "met_em.d<domain>.<date>"
1167	EOF
1168
1169	cat >! nest_real_11 << EOF
1170	input_from_file = .true.,.false.,.false.
1171	EOF
1172
1173	cat >! damp_real_11 << EOF
1174	damp_opt = 0,
1175	zdamp = 5000., 5000., 5000.,
1176	dampcoef = 0.05, 0.05, 0.05
1177	EOF
1178
1179	cat >! phys_real_12 << EOF
1180	mp_physics = 16, 16, 16,
1181	ra_lw_physics = 4, 4, 4,
1182	ra_sw_physics = 4, 4, 4,
1183	radt = 21, 21, 21,
1184	sf_sfclay_physics = 1, 1, 1,
1185	sf_surface_physics = 2, 2, 2,
1186	bl_pbl_physics = 8, 8, 8,
1187	bldt = 0, 0, 0,
1188	cu_physics = 3, 3, 0,
1189	cudt = 0, 0, 0,
1190	isfflx = 1,
1191	ifsnow = 0,
1192	icloud = 1,
1193	sf_urban_physics = 3, 3, 3,
1194	num_urban_layers = 1040
1195	surface_input_source = 1,
1196	num_soil_layers = 4,
1197	mp_zero_out = 0,
1198	maxiens = 1,
1199	maxens = 3,
1200	maxens2 = 3,
1201	maxens3 = 16,
1202	ensdim = 144,
1203	EOF
1204
1205	cat >! dyn_real_12 << EOF
1206	moist_adv_opt = 2, 2, 2,
1207	scalar_adv_opt = 2, 2, 2,
1208	chem_adv_opt = 0, 0, 0,
1209	tke_adv_opt = 0, 0, 0,
1210	EOF
1211
1212	cat >! time_real_12 << EOF
1213	auxinput1_inname = "met_em.d<domain>.<date>"
1214	EOF
1215
1216	cat >! nest_real_12 << EOF
1217	input_from_file = .true.,.false.,.false.
1218	EOF
1219
1220	cat >! damp_real_12 << EOF
1221	damp_opt = 1,
1222	zdamp = 5000., 5000., 5000.,
1223	dampcoef = 0.05, 0.05, 0.05
1224	EOF
1225
1226	cat >! phys_real_13 << EOF
1227	mp_physics =13, 13, 13,
1228	ra_lw_physics = 1, 1, 1,
1229	ra_sw_physics = 1, 1, 1,
1230	radt = 21, 21, 21,
1231	sf_sfclay_physics = 2, 2, 2,
1232	sf_surface_physics = 3, 3, 3,
1233	bl_pbl_physics = 9, 9, 9,
1234	bldt = 0, 0, 0,
1235	cu_physics = 7, 7, 0,
1236	cudt = 0, 0, 0,
1237	slope_rad = 1, 1, 1,
1238	topo_shading = 0, 0, 0,
1239	isfflx = 1,
1240	ifsnow = 0,
1241	icloud = 1,
1242	surface_input_source = 1,
1243	num_soil_layers = 6,
1244	mp_zero_out = 0,
1245	EOF
1246
1247	cat >! dyn_real_13 << EOF
1248	moist_adv_opt = 2, 2, 2,
1249	scalar_adv_opt = 2, 2, 2,
1250	chem_adv_opt = 0, 0, 0,
1251	tke_adv_opt = 0, 0, 0,
1252	EOF
1253
1254	cat >! time_real_13 << EOF
1255	auxinput1_inname = "met_em.d<domain>.<date>"
1256	EOF
1257
1258	cat >! nest_real_13 << EOF
1259	input_from_file = .true.,.false.,.false.
1260	EOF
1261
1262	cat >! damp_real_13 << EOF
1263	gwd_opt = 0,
1264	damp_opt = 3,
1265	zdamp = 5000., 5000., 5000.,
1266	dampcoef = 0.05, 0.05, 0.05
1267	EOF
1268
1269	cat >! phys_real_14 << EOF
1270	mp_physics = 3, 3, 3,
1271	ra_lw_physics = 3, 3, 3,
1272	ra_sw_physics = 3, 3, 3,
1273	radt = 21, 21, 21,
1274	sf_sfclay_physics = 4, 4, 4,
1275	sf_surface_physics = 3, 3, 3,
1276	bl_pbl_physics = 4, 4, 4,
1277	bldt = 0, 0, 0,
1278	cu_physics = 6, 6, 0,
1279	cudt = 0, 0, 0,
1280	isfflx = 1,
1281	ifsnow = 0,
1282	icloud = 1,
1283	surface_input_source = 1,
1284	num_soil_layers = 6,
1285	mp_zero_out = 0,
1286	levsiz = 59
1287	paerlev = 29
1288	cam_abs_freq_s = 21600
1289	cam_abs_dim1 = 4
1290	cam_abs_dim2 = 28
1291	EOF
1292
1293	cat >! dyn_real_14 << EOF
1294	moist_adv_opt = 2, 2, 2,
1295	scalar_adv_opt = 2, 2, 2,
1296	chem_adv_opt = 0, 0, 0,
1297	tke_adv_opt = 0, 0, 0,
1298	EOF
1299
1300	cat >! time_real_14 << EOF
1301	auxinput1_inname = "met_em.d<domain>.<date>"
1302	EOF
1303
1304	cat >! nest_real_14 << EOF
1305	input_from_file = .true.,.false.,.false.
1306	EOF
1307
1308	cat >! damp_real_14 << EOF
1309	damp_opt = 1,
1310	zdamp = 5000., 5000., 5000.,
1311	dampcoef = 0.05, 0.05, 0.05
1312	EOF
1313
1314	cat >! phys_real_15 << EOF
1315	mp_physics = 4, 4, 4,
1316	ra_lw_physics = 5, 5, 5,
1317	ra_sw_physics = 5, 5, 5,
1318	radt = 21, 21, 21,
1319	sf_sfclay_physics =10, 10, 10,
1320	sf_surface_physics = 7, 7, 7,
1321	bl_pbl_physics =10, 10, 10,
1322	bldt = 0, 0, 0,
1323	cu_physics =14, 14, 0,
1324	cudt = 0, 0, 0,
1325	isfflx = 1,
1326	ifsnow = 0,
1327	icloud = 1,
1328	surface_input_source = 1,
1329	num_soil_layers = 2,
1330	mp_zero_out = 0,
1331	EOF
1332
1333	cat >! dyn_real_15 << EOF
1334	moist_adv_opt = 2, 2, 2,
1335	scalar_adv_opt = 2, 2, 2,
1336	chem_adv_opt = 0, 0, 0,
1337	tke_adv_opt = 0, 0, 0,
1338	EOF
1339
1340	cat >! time_real_15 << EOF
1341	auxinput1_inname = "met_em.d<domain>.<date>"
1342	EOF
1343
1344	cat >! nest_real_15 << EOF
1345	input_from_file = .true.,.true.,.false.
1346	EOF
1347
1348	cat >! damp_real_15 << EOF
1349	damp_opt = 1,
1350	zdamp = 5000., 5000., 5000.,
1351	dampcoef = 0.05, 0.05, 0.05
1352	EOF
1353
1354	if ( $GLOBAL == TRUE ) then
1355	foreach exp ( 2 9 11 14 )
1356	sed -e 's/ cam_abs_dim2 *= [0-9][0-9]/ cam_abs_dim2 = 41/g' phys_real_$exp >! phys_foo ; mv phys_foo phys_real_$exp
1357	end
1358	cp dyn_real_SAFE dyn_real_1
1359	cp dyn_real_SAFE dyn_real_2
1360	cp dyn_real_SAFE dyn_real_3
1361	cp dyn_real_SAFE dyn_real_4
1362	cp dyn_real_SAFE dyn_real_5
1363	cp dyn_real_SAFE dyn_real_6
1364	cp dyn_real_SAFE dyn_real_7
1365	cp dyn_real_SAFE dyn_real_8
1366	cp dyn_real_SAFE dyn_real_9
1367	cp dyn_real_SAFE dyn_real_10
1368	cp dyn_real_SAFE dyn_real_11
1369	cp dyn_real_SAFE dyn_real_12
1370	cp dyn_real_SAFE dyn_real_13
1371	cp dyn_real_SAFE dyn_real_14
1372	endif
1373
1374	cat >! fdda_real_1 << EOF
1375	grid_sfdda = 1, 1, 1,
1376	sgfdda_inname = "wrfsfdda_d<domain>",
1377	sgfdda_end_h = 24, 24, 24,
1378	sgfdda_interval_m = 360, 360, 360,
1379	io_form_sgfdda = 2,
1380	guv_sfc = 0.0003, 0.0003, 0.0003,
1381	gt_sfc = 0.0003, 0.0003, 0.0003,
1382	gq_sfc = 0.0003, 0.0003, 0.0003,
1383	rinblw = 250.,
1384	grid_fdda = 1, 1, 1,
1385	gfdda_inname = "wrffdda_d<domain>",
1386	gfdda_end_h = 24, 24, 24,
1387	gfdda_interval_m = 360, 360, 360,
1388	fgdt = 0, 0, 0,
1389	if_no_pbl_nudging_uv = 0, 0, 1,
1390	if_no_pbl_nudging_t = 0, 0, 1,
1391	if_no_pbl_nudging_q = 0, 0, 1,
1392	if_zfac_uv = 0, 0, 1,
1393	k_zfac_uv = 10, 10, 1,
1394	if_zfac_t = 0, 0, 1,
1395	k_zfac_t = 10, 10, 1,
1396	if_zfac_q = 0, 0, 1,
1397	k_zfac_q = 10, 10, 1,
1398	guv = 0.0003, 0.0003, 0.0003,
1399	gt = 0.0003, 0.0003, 0.0003,
1400	gq = 0.0003, 0.0003, 0.0003,
1401	if_ramping = 1,
1402	dtramp_min = 360.0,
1403	io_form_gfdda = 2,
1404	EOF
1405
1406	cat >! fdda_real_time_1 << EOF
1407	EOF
1408
1409	cat >! fdda_real_2 << EOF
1410	obs_nudge_opt = 1,1,1,1,1
1411	max_obs = 150000,
1412	obs_nudge_wind = 1,1,1,1,1
1413	obs_coef_wind = 6.E-4,6.E-4,6.E-4,6.E-4,6.E-4
1414	obs_nudge_temp = 1,1,1,1,1
1415	obs_coef_temp = 6.E-4,6.E-4,6.E-4,6.E-4,6.E-4
1416	obs_nudge_mois = 1,1,1,1,1
1417	obs_coef_mois = 6.E-4,6.E-4,6.E-4,6.E-4,6.E-4
1418	obs_rinxy = 240.,240.,180.,180,180
1419	obs_rinsig = 0.1,
1420	obs_twindo = 40.
1421	obs_npfi = 10,
1422	obs_ionf = 2,
1423	obs_idynin = 0,
1424	obs_dtramp = 40.,
1425	obs_ipf_errob = .true.
1426	obs_ipf_nudob = .true.
1427	obs_ipf_in4dob = .true.
1428	EOF
1429
1430	cat >! fdda_real_time_2 << EOF
1431	auxinput11_interval_s = 180
1432	auxinput11_end_h = 6
1433	EOF
1434
1435	cat >! fdda_real_3 << EOF
1436	grid_sfdda = 1, 1, 1,
1437	sgfdda_inname = "wrfsfdda_d<domain>",
1438	sgfdda_end_h = 24, 24, 24,
1439	sgfdda_interval_m = 360, 360, 360,
1440	io_form_sgfdda = 2,
1441	guv_sfc = 0.0003, 0.0003, 0.0003,
1442	gt_sfc = 0.0003, 0.0003, 0.0003,
1443	gq_sfc = 0.0003, 0.0003, 0.0003,
1444	rinblw = 250.,
1445	grid_fdda = 1, 1, 1,
1446	gfdda_inname = "wrffdda_d<domain>",
1447	gfdda_end_h = 24, 24, 24,
1448	gfdda_interval_m = 360, 360, 360,
1449	fgdt = 0, 0, 0,
1450	if_no_pbl_nudging_uv = 0, 0, 1,
1451	if_no_pbl_nudging_t = 0, 0, 1,
1452	if_no_pbl_nudging_q = 0, 0, 1,
1453	if_zfac_uv = 0, 0, 1,
1454	k_zfac_uv = 10, 10, 1,
1455	if_zfac_t = 0, 0, 1,
1456	k_zfac_t = 10, 10, 1,
1457	if_zfac_q = 0, 0, 1,
1458	k_zfac_q = 10, 10, 1,
1459	guv = 0.0003, 0.0003, 0.0003,
1460	gt = 0.0003, 0.0003, 0.0003,
1461	gq = 0.0003, 0.0003, 0.0003,
1462	if_ramping = 1,
1463	dtramp_min = 360.0,
1464	io_form_gfdda = 2,
1465	obs_nudge_opt = 0,0,0,0,0
1466	max_obs = 150000,
1467	obs_nudge_wind = 1,1,1,1,1
1468	obs_coef_wind = 6.E-4,6.E-4,6.E-4,6.E-4,6.E-4
1469	obs_nudge_temp = 1,1,1,1,1
1470	obs_coef_temp = 6.E-4,6.E-4,6.E-4,6.E-4,6.E-4
1471	obs_nudge_mois = 1,1,1,1,1
1472	obs_coef_mois = 6.E-4,6.E-4,6.E-4,6.E-4,6.E-4
1473	obs_rinxy = 240.,240.,180.,180,180
1474	obs_rinsig = 0.1,
1475	obs_twindo = 40.
1476	obs_npfi = 10,
1477	obs_ionf = 2,
1478	obs_idynin = 0,
1479	obs_dtramp = 40.,
1480	obs_ipf_errob = .true.
1481	obs_ipf_nudob = .true.
1482	obs_ipf_in4dob = .true.
1483	EOF
1484
1485	cat >! fdda_real_time_3 << EOF
1486	auxinput11_interval_s = 180
1487	auxinput11_end_h = 6
1488	EOF
1489
1490	cat >! fdda_real_4 << EOF
1491	grid_sfdda = 1, 1, 1,
1492	sgfdda_inname = "wrfsfdda_d<domain>",
1493	sgfdda_end_h = 24, 24, 24,
1494	sgfdda_interval_m = 360, 360, 360,
1495	io_form_sgfdda = 2,
1496	guv_sfc = 0.0003, 0.0003, 0.0003,
1497	gt_sfc = 0.0003, 0.0003, 0.0003,
1498	gq_sfc = 0.0003, 0.0003, 0.0003,
1499	rinblw = 250.,
1500	grid_fdda = 1, 1, 1,
1501	gfdda_inname = "wrffdda_d<domain>",
1502	gfdda_end_h = 24, 24, 24,
1503	gfdda_interval_m = 360, 360, 360,
1504	fgdt = 0, 0, 0,
1505	if_no_pbl_nudging_uv = 0, 0, 1,
1506	if_no_pbl_nudging_t = 0, 0, 1,
1507	if_no_pbl_nudging_q = 0, 0, 1,
1508	if_zfac_uv = 0, 0, 1,
1509	k_zfac_uv = 10, 10, 1,
1510	if_zfac_t = 0, 0, 1,
1511	k_zfac_t = 10, 10, 1,
1512	if_zfac_q = 0, 0, 1,
1513	k_zfac_q = 10, 10, 1,
1514	guv = 0.0003, 0.0003, 0.0003,
1515	gt = 0.0003, 0.0003, 0.0003,
1516	gq = 0.0003, 0.0003, 0.0003,
1517	if_ramping = 1,
1518	dtramp_min = 360.0,
1519	io_form_gfdda = 2,
1520	obs_nudge_opt = 1,1,1,1,1
1521	max_obs = 150000,
1522	obs_nudge_wind = 1,1,1,1,1
1523	obs_coef_wind = 6.E-4,6.E-4,6.E-4,6.E-4,6.E-4
1524	obs_nudge_temp = 1,1,1,1,1
1525	obs_coef_temp = 6.E-4,6.E-4,6.E-4,6.E-4,6.E-4
1526	obs_nudge_mois = 1,1,1,1,1
1527	obs_coef_mois = 6.E-4,6.E-4,6.E-4,6.E-4,6.E-4
1528	obs_rinxy = 240.,240.,180.,180,180
1529	obs_rinsig = 0.1,
1530	obs_twindo = 40.
1531	obs_npfi = 10,
1532	obs_ionf = 2,
1533	obs_idynin = 0,
1534	obs_dtramp = 40.,
1535	obs_ipf_errob = .true.
1536	obs_ipf_nudob = .true.
1537	obs_ipf_in4dob = .true.
1538	EOF
1539
1540	cat >! fdda_real_time_4 << EOF
1541	auxinput11_interval_s = 180
1542	auxinput11_end_h = 6
1543	EOF
1544
1545	cat >! fdda_real_5 << EOF
1546	grid_fdda = 2, 2, 2,
1547	gfdda_inname = "wrffdda_d<domain>",
1548	gfdda_end_h = 24, 24, 24,
1549	gfdda_interval_m = 360, 360, 360,
1550	fgdt = 0, 0, 0,
1551	fgdtzero = 0, 0, 0,
1552	if_no_pbl_nudging_uv = 0, 0, 0,
1553	if_no_pbl_nudging_t = 0, 0, 0,
1554	if_no_pbl_nudging_ph = 0, 0, 0,
1555	if_no_pbl_nudging_q = 0, 0, 0,
1556	if_zfac_uv = 0, 0, 0,
1557	k_zfac_uv = 10, 10, 10,
1558	if_zfac_t = 0, 0, 0,
1559	k_zfac_t = 10, 10, 10,
1560	if_zfac_ph = 0, 0, 0,
1561	k_zfac_ph = 10, 10, 10,
1562	if_zfac_q = 0, 0, 0,
1563	k_zfac_q = 10, 10, 10,
1564	dk_zfac_uv = 1, 1, 1,
1565	dk_zfac_t = 1, 1, 1,
1566	dk_zfac_ph = 1, 1, 1,
1567	guv = 0.0003, 0.0003, 0.0003,
1568	gt = 0.0003, 0.0003, 0.0003,
1569	gph = 0.0003, 0.0003, 0.0003,
1570	gq = 0.0003, 0.0003, 0.0003,
1571	xwavenum = 3
1572	ywavenum = 3
1573	if_ramping = 1,
1574	dtramp_min = 60.0,
1575	io_form_gfdda = 2,
1576	EOF
1577
1578	cat >! fdda_real_time_5 << EOF
1579	EOF
1580
1581	# Tested options for ideal case em_b_wave. Modifying these
1582	# parameters is acceptable. Adding to these requires changes
1583	# to the ideal namelist build below.
1584
1585	cat >! phys_b_wave_1a << EOF
1586	diff_opt = 1,
1587	km_opt = 1,
1588	damp_opt = 0,
1589	EOF
1590	cat >! phys_b_wave_1b << EOF
1591	mp_physics = 1, 1, 1,
1592	EOF
1593	cat >! phys_b_wave_1c << EOF
1594	non_hydrostatic = .true., .true., .true.,
1595	EOF
1596	cat >! phys_b_wave_1d << EOF
1597	input_from_file = .true.,.false.,.false.
1598	EOF
1599
1600	cat >! phys_b_wave_2a << EOF
1601	diff_opt = 1,
1602	km_opt = 1,
1603	damp_opt = 0,
1604	EOF
1605	cat >! phys_b_wave_2b << EOF
1606	mp_physics = 1, 1, 1,
1607	EOF
1608	cat >! phys_b_wave_2c << EOF
1609	non_hydrostatic = .false., .false., .false.,
1610	EOF
1611	cat >! phys_b_wave_2d << EOF
1612	input_from_file = .true.,.false.,.false.
1613	EOF
1614
1615	cat >! phys_b_wave_3a << EOF
1616	diff_opt = 1,
1617	km_opt = 1,
1618	damp_opt = 0,
1619	EOF
1620	cat >! phys_b_wave_3b << EOF
1621	mp_physics = 2, 2, 2,
1622	EOF
1623	cat >! phys_b_wave_3c << EOF
1624	non_hydrostatic = .false., .false., .false.,
1625	EOF
1626	cat >! phys_b_wave_3d << EOF
1627	input_from_file = .true.,.false.,.false.
1628	EOF
1629
1630	cat >! phys_b_wave_4a << EOF
1631	diff_opt = 1,
1632	km_opt = 1,
1633	damp_opt = 0,
1634	EOF
1635	cat >! phys_b_wave_4b << EOF
1636	mp_physics = 2, 2, 2,
1637	EOF
1638	cat >! phys_b_wave_4c << EOF
1639	non_hydrostatic = .true., .true., .true.,
1640	EOF
1641	cat >! phys_b_wave_4d << EOF
1642	input_from_file = .true.,.false.,.false.
1643	EOF
1644
1645	cat >! phys_b_wave_5a << EOF
1646	diff_opt = 1,
1647	km_opt = 1,
1648	damp_opt = 0,
1649	EOF
1650	cat >! phys_b_wave_5b << EOF
1651	mp_physics = 0, 0, 0,
1652	EOF
1653	cat >! phys_b_wave_5c << EOF
1654	non_hydrostatic = .false., .false., .false.,
1655	EOF
1656	cat >! phys_b_wave_5d << EOF
1657	input_from_file = .true.,.false.,.false.
1658	EOF
1659
1660	# Tested options for ideal case em_quarter_ss. Modifying these
1661	# parameters is acceptable. Adding to these requires changes
1662	# to the ideal namelist build below.
1663
1664	cat >! phys_quarter_ss_1a << EOF
1665	diff_opt = 1,
1666	km_opt = 1,
1667	damp_opt = 0,
1668	EOF
1669	cat >! phys_quarter_ss_1b << EOF
1670	mp_physics = 1, 1, 1,
1671	EOF
1672	cat >! phys_quarter_ss_1c << EOF
1673	moist_adv_opt = 1, 1, 1,
1674	scalar_adv_opt = 1, 1, 1,
1675	chem_adv_opt = 1, 1, 1,
1676	tke_adv_opt = 1, 1, 1,
1677	non_hydrostatic = .true., .true., .true.,
1678	EOF
1679	cat >! phys_quarter_ss_1d << EOF
1680	input_from_file = .true.,.false.,.false.
1681	EOF
1682	cat >! phys_quarter_ss_1e << EOF
1683	periodic_x = .false.,.false.,.false.,
1684	open_xs = .true., .false.,.false.,
1685	open_xe = .true., .false.,.false.,
1686	periodic_y = .false.,.false.,.false.,
1687	open_ys = .true., .false.,.false.,
1688	open_ye = .true., .false.,.false.,
1689	EOF
1690	cat >! phys_quarter_ss_1f << EOF
1691	sf_sfclay_physics = 0, 0, 0,
1692	EOF
1693
1694	cat >! phys_quarter_ss_2a << EOF
1695	diff_opt = 2,
1696	km_opt = 2,
1697	damp_opt = 1,
1698	EOF
1699	cat >! phys_quarter_ss_2b << EOF
1700	mp_physics = 1, 1, 1,
1701	EOF
1702	cat >! phys_quarter_ss_2c << EOF
1703	moist_adv_opt = 2, 2, 2,
1704	scalar_adv_opt = 2, 2, 2,
1705	chem_adv_opt = 2, 2, 2,
1706	tke_adv_opt = 2, 2, 2,
1707	sfs_opt = 0, 0, 0,
1708	non_hydrostatic = .true., .true., .true.,
1709	EOF
1710	cat >! phys_quarter_ss_2d << EOF
1711	input_from_file = .true.,.false.,.false.
1712	EOF
1713	cat >! phys_quarter_ss_2e << EOF
1714	periodic_x = .false.,.false.,.false.,
1715	open_xs = .true., .false.,.false.,
1716	open_xe = .true., .false.,.false.,
1717	periodic_y = .false.,.false.,.false.,
1718	open_ys = .true., .false.,.false.,
1719	open_ye = .true., .false.,.false.,
1720	EOF
1721	cat >! phys_quarter_ss_2f << EOF
1722	sf_sfclay_physics = 1, 1, 1,
1723	EOF
1724
1725	cat >! phys_quarter_ss_3a << EOF
1726	diff_opt = 2,
1727	km_opt = 2,
1728	damp_opt = 1,
1729	EOF
1730	cat >! phys_quarter_ss_3b << EOF
1731	mp_physics = 1, 1, 1,
1732	EOF
1733	cat >! phys_quarter_ss_3c << EOF
1734	moist_adv_opt = 2, 2, 2,
1735	scalar_adv_opt = 2, 2, 2,
1736	chem_adv_opt = 2, 2, 2,
1737	tke_adv_opt = 2, 2, 2,
1738	sfs_opt = 1, 1, 1,
1739	non_hydrostatic = .true., .true., .true.,
1740	EOF
1741	cat >! phys_quarter_ss_3d << EOF
1742	input_from_file = .true.,.false.,.false.
1743	EOF
1744	cat >! phys_quarter_ss_3e << EOF
1745	periodic_x = .false.,.false.,.false.,
1746	open_xs = .true., .false.,.false.,
1747	open_xe = .true., .false.,.false.,
1748	periodic_y = .false.,.false.,.false.,
1749	open_ys = .true., .false.,.false.,
1750	open_ye = .true., .false.,.false.,
1751	EOF
1752	cat >! phys_quarter_ss_3f << EOF
1753	sf_sfclay_physics = 1, 1, 1,
1754	EOF
1755
1756	cat >! phys_quarter_ss_4a << EOF
1757	diff_opt = 2,
1758	km_opt = 3,
1759	damp_opt = 2,
1760	EOF
1761	cat >! phys_quarter_ss_4b << EOF
1762	mp_physics = 2, 2, 2,
1763	EOF
1764	cat >! phys_quarter_ss_4c << EOF
1765	moist_adv_opt = 1, 1, 1,
1766	scalar_adv_opt = 1, 1, 1,
1767	chem_adv_opt = 1, 1, 1,
1768	tke_adv_opt = 1, 1, 1,
1769	sfs_opt = 1, 1, 1,
1770	non_hydrostatic = .false., .false., .false.,
1771	EOF
1772	cat >! phys_quarter_ss_4d << EOF
1773	input_from_file = .true.,.false.,.false.
1774	EOF
1775	cat >! phys_quarter_ss_4e << EOF
1776	periodic_x = .true., .false.,.false.,
1777	open_xs = .false.,.false.,.false.,
1778	open_xe = .false.,.false.,.false.,
1779	periodic_y = .true., .false.,.false.,
1780	open_ys = .false.,.false.,.false.,
1781	open_ye = .false.,.false.,.false.,
1782	EOF
1783	cat >! phys_quarter_ss_4f << EOF
1784	sf_sfclay_physics = 1, 1, 1,
1785	EOF
1786
1787	cat >! phys_quarter_ss_5a << EOF
1788	diff_opt = 2,
1789	km_opt = 2,
1790	damp_opt = 2,
1791	EOF
1792	cat >! phys_quarter_ss_5b << EOF
1793	mp_physics = 2, 2, 2,
1794	EOF
1795	cat >! phys_quarter_ss_5c << EOF
1796	moist_adv_opt = 2, 2, 2,
1797	scalar_adv_opt = 2, 2, 2,
1798	chem_adv_opt = 2, 2, 2,
1799	tke_adv_opt = 2, 2, 2,
1800	sfs_opt = 2, 2, 2,
1801	non_hydrostatic = .false., .false., .false.,
1802	EOF
1803	cat >! phys_quarter_ss_5d << EOF
1804	input_from_file = .true.,.false.,.false.
1805	EOF
1806	cat >! phys_quarter_ss_5e << EOF
1807	periodic_x = .true., .false.,.false.,
1808	open_xs = .false.,.false.,.false.,
1809	open_xe = .false.,.false.,.false.,
1810	periodic_y = .true., .false.,.false.,
1811	open_ys = .false.,.false.,.false.,
1812	open_ye = .false.,.false.,.false.,
1813	EOF
1814	cat >! phys_quarter_ss_5f << EOF
1815	sf_sfclay_physics = 1, 1, 1,
1816	EOF
1817
1818	if ( $IO_FORM_WHICH[$IO_FORM] == IO ) then
1819	cat >! io_format << EOF
1820	io_form_history = $IO_FORM
1821	io_form_restart = $IO_FORM
1822	io_form_input = $IO_FORM
1823	io_form_boundary = $IO_FORM
1824	EOF
1825	else if ( $IO_FORM_WHICH[$IO_FORM] == I ) then
1826	cat >! io_format << EOF
1827	io_form_history = 2
1828	io_form_restart = 2
1829	io_form_input = $IO_FORM
1830	io_form_boundary = $IO_FORM
1831	EOF
1832	else if ( $IO_FORM_WHICH[$IO_FORM] == O ) then
1833	cat >! io_format << EOF
1834	io_form_history = $IO_FORM
1835	io_form_restart = 2
1836	io_form_input = 2
1837	io_form_boundary = 2
1838	EOF
1839	endif
1840
1841
1842	if ( $dataset == jun01 ) then
1843	set filetag_real=2001-06-11_12:00:00
1844	else if ( $dataset == jan00 ) then
1845	set filetag_real=2000-01-24_12:00:00
1846	else if ( $dataset == chem ) then
1847	set filetag_real = ( 2006-04-06_00:00:00 2006-04-06_12:00:00 )
1848	else if ( $dataset == global ) then
1849	set filetag_real=2008-01-02_12:00:00
1850	endif
1851
1852	set filetag_ideal=0001-01-01_00:00:00
1853	#DAVE###################################################
1854	echo did phys, set date to $filetag_real
1855	banner 2
1856	#set ans = "$<"
1857	#DAVE###################################################
1858
1859	#####################################################################
1860
1861	# Set up info for particular architectures
1862
1863	set ARCH = ( `uname` )
1864
1865	set ZAP_SERIAL = FALSE
1866	set ZAP_OPENMP = FALSE
1867	set SERIALRUNCOMMAND =
1868	set OMPRUNCOMMAND =
1869	set MPIRUNCOMMANDPOST =
1870
1871	touch version_info
1872	if ( $ARCH[1] == AIX ) then
1873	set DEF_DIR = $home
1874	set TMPDIR = /ptmp/$user
1875	# keep stuff out of $HOME and /ptmp/$USER
1876	# this allows multiple regressions tests to run simultaneously
1877	# extend this to other machines later
1878	if ( ( `hostname \| cut -c 1-2` == bs ) && ( ! $?LOADL_JOB_NAME ) ) then
1879	echo "${0}: ERROR:: This batch script must be submitted via"
1880	echo "${0}: LoadLeveler on an AIX machine\!"
1881	exit
1882	else if ( `hostname \| cut -c 1-2` == bs ) then
1883	set job_id = `echo ${LOADL_JOB_NAME} \| cut -f2 -d'.'`
1884	set DEF_DIR = /ptmp/$user/wrf_regression.${job_id}
1885	set TMPDIR = $DEF_DIR
1886	if ( -d $DEF_DIR ) then
1887	echo "${0}: ERROR:: Directory ${DEF_DIR} exists, please remove it"
1888	exit ( 1 )
1889	else
1890	mkdir -p $DEF_DIR
1891	echo "See ${DEF_DIR}/wrftest.output and other files in ${DEF_DIR} for test results"
1892	endif
1893	set CUR_DIR = ${LOADL_STEP_INITDIR}
1894	else if ( ( `hostname \| cut -c 1-2` == bv ) \|\| ( `hostname \| cut -c 1-2` == be ) ) then
1895	set job_id = $LSB_JOBID
1896	set DEF_DIR = /ptmp/$user/${tdir}/wrf_regression.${job_id}
1897	set TMPDIR = $DEF_DIR
1898	if ( -d $DEF_DIR ) then
1899	echo "${0}: ERROR:: Directory ${DEF_DIR} exists, please remove it"
1900	exit ( 1 )
1901	else
1902	mkdir -p $DEF_DIR
1903	echo "See ${DEF_DIR}/wrftest.output and other files in ${DEF_DIR} for test results"
1904	endif
1905	else if ( ( ( `hostname \| cut -c 1-2` != be ) && ( `hostname \| cut -c 1-2` != bv ) ) && ( ! $?LOADL_JOB_NAME ) ) then
1906	echo "${0}: ERROR:: This batch script must be submitted via"
1907	echo "${0}: LoadLeveler on an AIX machine\!"
1908	exit
1909	else if ( ( `hostname \| cut -c 1-2` != be ) && ( `hostname \| cut -c 1-2` != bv ) ) then
1910	set job_id = `echo ${LOADL_JOB_NAME} \| cut -f2 -d'.'`
1911	set DEF_DIR = /ptmp/$user/wrf_regression.${job_id}
1912	set TMPDIR = $DEF_DIR
1913	if ( -d $DEF_DIR ) then
1914	echo "${0}: ERROR:: Directory ${DEF_DIR} exists, please remove it"
1915	exit ( 1 )
1916	else
1917	mkdir -p $DEF_DIR
1918	echo "See ${DEF_DIR}/wrftest.output and other files in ${DEF_DIR} for test results"
1919	endif
1920	set CUR_DIR = ${LOADL_STEP_INITDIR}
1921	endif
1922	if ( ! -d $TMPDIR ) mkdir $TMPDIR
1923	set MAIL = /usr/bin/mailx
1924	set COMPOPTS = ( 1 2 3 )
1925	set COMPOPTS_NO_NEST = 0
1926	set COMPOPTS_NEST_STATIC = 1
1927	set COMPOPTS_NEST_PRESCRIBED = 2
1928	set Num_Procs = 4
1929	set OPENMP = $Num_Procs
1930	setenv MP_PROCS $Num_Procs
1931	setenv MP_RMPOOL 1
1932	if ( `hostname \| cut -c 1-2` == bs ) then
1933	set MPIRUNCOMMAND = poe
1934	else if ( `hostname \| cut -c 1-2` == bv ) then
1935	set MPIRUNCOMMAND = mpirun.lsf
1936	else if ( `hostname \| cut -c 1-2` == be ) then
1937	set MPIRUNCOMMAND = /contrib/mpiruns/be/mpirun.lsf
1938	else if ( ( `hostname \| cut -c 1-2` != bs ) && \
1939	( `hostname \| cut -c 1-2` != bv ) && ( `hostname \| cut -c 1-2` != be ) ) then
1940	set MPIRUNCOMMAND = poe
1941	endif
1942	if ( $CHEM == TRUE ) then
1943	set ZAP_OPENMP = TRUE
1944	else if ( $CHEM == FALSE ) then
1945	set ZAP_OPENMP = FALSE
1946	endif
1947	# check compiler version, JM
1948	lslpp -i \| grep xlf \| grep ' xlfcmp ' \| head -1
1949	set xlfvers=`lslpp -i \| grep xlf \| grep ' xlfcmp ' \| head -1 \| awk '{print $2}' \| sed 's/\...*$//'`
1950	if ( ( $xlfvers > 9 ) && ( $NESTED == TRUE ) ) then
1951	# set ZAP_OPENMP = TRUE
1952	endif
1953	# end of compiler check, JM
1954	echo "Compiler version info: " >! version_info
1955	echo "FORTRAN: " `lslpp -l \| grep xlfrte \| head -1 \| awk '{print $1 " " $2}'` >>! version_info
1956	echo " " >>! version_info
1957	echo "OS version info: " >>! version_info
1958	echo "AIX: " `lslpp -l \| grep bos.mp \| head -1 \| awk '{print $1 " " $2}'` >>! version_info
1959	echo " " >>! version_info
1960	setenv MP_SHARED_MEMORY yes
1961	else if ( $ARCH[1] == Darwin ) then
1962	if ( ( `hostname` == stink ) && ( -d /stink/gill/Regression_Tests ) ) then
1963	set DEF_DIR = /stink/gill/Regression_Tests/wrf_regression
1964	mkdir $DEF_DIR
1965	else
1966	echo "We at least need a directory from which to do stuff"
1967	exit ( 2 )
1968	endif
1969	set TMPDIR = .
1970	set MAIL = /usr/bin/mailx
1971	if ( $LINUX_COMP == PGI ) then
1972	set COMPOPTS = ( 1 2 3 )
1973	set ZAP_OPENMP = FALSE
1974	else if ( $LINUX_COMP == G95 ) then
1975	set COMPOPTS = ( 13 0 14 )
1976	set ZAP_OPENMP = TRUE
1977	endif
1978	set COMPOPTS_NO_NEST = 0
1979	set COMPOPTS_NEST_STATIC = 1
1980	set COMPOPTS_NEST_PRESCRIBED = 2
1981	set Num_Procs = 4
1982	set OPENMP = 2
1983	cat >! `pwd`/machfile << EOF
1984	`hostname`
1985	`hostname`
1986	`hostname`
1987	`hostname`
1988	EOF
1989	set Mach = `pwd`/machfile
1990	set SERIALRUNCOMMAND =
1991	set OMPRUNCOMMAND =
1992	echo "Compiler version info: " >! version_info
1993	if ( $LINUX_COMP == PGI ) then
1994	set MPIRUNCOMMAND = ( /usr/local/mpich2-1.0.6p1-pgi/bin/mpirun -np $Num_Procs -machinefile $Mach )
1995	pgf90 -V \| head -2 \| tail -1 >>&! version_info
1996	else if ( $LINUX_COMP == G95 ) then
1997	set MPIRUNCOMMAND = ( /usr/local/mpich/bin/mpirun -np $Num_Procs -machinefile $Mach )
1998	g95 -v \|& grep gcc >>&! version_info
1999	endif
2000	echo " " >>! version_info
2001	echo "OS version info: " >>! version_info
2002	uname -a >>&! version_info
2003	echo " " >>! version_info
2004	ps -A \| grep mpd \| grep -v grep >& /dev/null
2005	set ok = $status
2006	if ( $ok != 0 ) then
2007	echo starting an mpd process
2008	mpd &
2009	endif
2010	else if ( $ARCH[1] == OSF1 && $clrm == 1 ) then
2011	set DEF_DIR = /`hostname \| cut -d. -f1`/$user
2012	set TMPDIR = /mmmtmp/$user
2013	set MAIL = /usr/bin/mailx
2014	if ( ( $NESTED == TRUE ) && ( $RSL_LITE != TRUE ) ) then
2015	set COMPOPTS = ( 2 4 6 )
2016	else if ( ( $NESTED != TRUE ) && ( $RSL_LITE != TRUE ) ) then
2017	set COMPOPTS = ( 1 3 6 )
2018	else if ( ( $NESTED == TRUE ) && ( $RSL_LITE == TRUE ) ) then
2019	set COMPOPTS = ( 2 4 5 )
2020	else if ( ( $NESTED != TRUE ) && ( $RSL_LITE == TRUE ) ) then
2021	set COMPOPTS = ( 1 3 5 )
2022	endif
2023	set Num_Procs = 4
2024	set OPENMP = 0
2025	set ZAP_OPENMP = TRUE
2026	cat >! $TMPDIR/machfile << EOF
2027	service03
2028	service04
2029	service05
2030	service06
2031	EOF
2032	set Mach = $TMPDIR/machfile
2033	set MPIRUNCOMMAND = ( mpirun -np $Num_Procs -machinefile $Mach )
2034	echo "Compiler version info: " >! version_info
2035	f90 -version >>&! version_info
2036	echo " " >>! version_info
2037	echo "OS version info: " >>! version_info
2038	uname -a >>&! version_info
2039	echo " " >>! version_info
2040	else if ( ( $ARCH[1] == Linux ) && ( `hostname` == bay-mmm ) ) then
2041	set DEF_DIR = /data3/mp/${user}/`hostname`
2042	if ( ! -d $DEF_DIR ) mkdir $DEF_DIR
2043	set TMPDIR = .
2044	set MAIL = /bin/mail
2045	if ( $LINUX_COMP == PGI ) then
2046	if ( ( $NESTED == TRUE ) && ( $RSL_LITE != TRUE ) ) then
2047	set COMPOPTS = ( 2 4 5 )
2048	else if ( ( $NESTED != TRUE ) && ( $RSL_LITE != TRUE ) ) then
2049	set COMPOPTS = ( 1 3 5 )
2050	else if ( ( $NESTED == TRUE ) && ( $RSL_LITE == TRUE ) ) then
2051	set COMPOPTS = ( 2 4 6 )
2052	else if ( ( $NESTED != TRUE ) && ( $RSL_LITE == TRUE ) ) then
2053	set COMPOPTS = ( 1 3 6 )
2054	endif
2055	else if ( $LINUX_COMP == INTEL ) then
2056	if ( $NESTED == TRUE ) then
2057	set COMPOPTS = ( 8 10 11 )
2058	else if ( $NESTED != TRUE ) then
2059	set COMPOPTS = ( 7 9 11 )
2060	endif
2061	endif
2062	set Num_Procs = 2
2063	set OPENMP = $Num_Procs
2064	cat >! machfile << EOF
2065	`hostname`
2066	`hostname`
2067	`hostname`
2068	`hostname`
2069	EOF
2070	set Mach = `pwd`/machfile
2071	if ( $CHEM == TRUE ) then
2072	set ZAP_OPENMP = TRUE
2073	else if ( $CHEM == FALSE ) then
2074	set ZAP_OPENMP = FALSE
2075	endif
2076	if ( $LINUX_COMP == INTEL ) then
2077	set ZAP_OPENMP = TRUE
2078	endif
2079	set MPIRUNCOMMAND = ( mpirun -np $Num_Procs -machinefile $Mach )
2080	echo "Compiler version info: " >! version_info
2081	if ( $LINUX_COMP == PGI ) then
2082	pgf90 -V >>&! version_info
2083	else if ( $LINUX_COMP == INTEL ) then
2084	ifort -v >>&! version_info
2085	endif
2086	echo " " >>! version_info
2087	echo "OS version info: " >>! version_info
2088	uname -a >>&! version_info
2089	echo " " >>! version_info
2090	else if ( ( $ARCH[1] == Linux ) && ( `hostname \| cut -c 1-2` == ln ) ) then
2091	set DEF_DIR = /ptmp/${user}/wrf_regtest
2092	if ( ! -d $DEF_DIR ) mkdir $DEF_DIR
2093	set TMPDIR = .
2094	set MAIL = /bin/mail
2095	if ( $LINUX_COMP == PGI ) then
2096	if ( ( $NESTED == TRUE ) && ( $RSL_LITE != TRUE ) ) then
2097	set COMPOPTS = ( 4 2 3 )
2098	else if ( ( $NESTED != TRUE ) && ( $RSL_LITE != TRUE ) ) then
2099	set COMPOPTS = ( 1 2 3 )
2100	endif
2101	endif
2102	set Num_Procs = 4
2103	set OPENMP = 2
2104	cat >! machfile << EOF
2105	`hostname`
2106	`hostname`
2107	`hostname`
2108	`hostname`
2109	EOF
2110	set Mach = `pwd`/machfile
2111	set ZAP_OPENMP = TRUE
2112	set MPIRUNCOMMAND = mpirun.lsf
2113	echo "Compiler version info: " >! version_info
2114	if ( $LINUX_COMP == PGI ) then
2115	pgf90 -V >>&! version_info
2116	else if ( $LINUX_COMP == INTEL ) then
2117	ifort -v >>&! version_info
2118	endif
2119	echo " " >>! version_info
2120	echo "OS version info: " >>! version_info
2121	uname -a >>&! version_info
2122	echo " " >>! version_info
2123	else if ( ( $ARCH[1] == Linux ) && ( `hostname` == basswood ) ) then
2124	set job_id = $$
2125	set DEF_DIR = /basswood/$user/Regression_Tests/wrf_regression
2126	set TMPDIR = $DEF_DIR
2127	if ( -d $DEF_DIR ) then
2128	echo "${0}: ERROR:: Directory ${DEF_DIR} exists, please remove it"
2129	exit ( 1 )
2130	else
2131	mkdir -p $DEF_DIR
2132	echo "See directory ${DEF_DIR}/ for wrftest.output and other test results"
2133	endif
2134	set MAIL = /bin/mail
2135	set COMPOPTS_NO_NEST = 0
2136	set COMPOPTS_NEST_STATIC = 1
2137	set COMPOPTS_NEST_PRESCRIBED = 2
2138	if ( $LINUX_COMP == PGI ) then
2139	set COMPOPTS = ( 7 8 9 )
2140	else if ( $LINUX_COMP == G95 ) then
2141	set COMPOPTS = ( 5 5 6 )
2142	endif
2143	set Num_Procs = 4
2144	set OPENMP = $Num_Procs
2145	cat >! machfile << EOF
2146	`hostname`
2147	`hostname`
2148	`hostname`
2149	`hostname`
2150	EOF
2151	set Mach = `pwd`/machfile
2152	if ( $CHEM == TRUE ) then
2153	set ZAP_OPENMP = TRUE
2154	else if ( $CHEM == FALSE ) then
2155	set ZAP_OPENMP = FALSE
2156	endif
2157	if ( $LINUX_COMP == G95 ) then
2158	set ZAP_OPENMP = TRUE
2159	endif
2160	set ZAP_OPENMP = TRUE
2161	set MPIRUNCOMMAND = ( mpirun -np $Num_Procs -machinefile $Mach )
2162	echo "Compiler version info: " >! version_info
2163	if ( $LINUX_COMP == PGI ) then
2164	pgf90 -V >>&! version_info
2165	else if ( $LINUX_COMP == G95 ) then
2166	g95 -v \|& grep gcc >>&! version_info
2167	endif
2168	echo " " >>! version_info
2169	echo "OS version info: " >>! version_info
2170	uname -a >>&! version_info
2171	echo " " >>! version_info
2172	else if ( `hostname` == tempest ) then
2173	set DEF_DIR = /ptmp/${user}/wrf_regtest.${QSUB_REQID}
2174	if ( ! -d $DEF_DIR ) mkdir $DEF_DIR
2175	set TMPDIR = .
2176	set MAIL = /usr/sbin/Mail
2177	set COMPOPTS = ( 1 2 3 )
2178	set Num_Procs = 2
2179	set OPENMP = $Num_Procs
2180	set Mach = `pwd`/machfile
2181	set ZAP_OPENMP = TRUE
2182	set MPIRUNCOMMAND = ( mpirun -np $Num_Procs )
2183	echo "Compiler version info: " >! version_info
2184	f90 -version >>&! version_info
2185	echo " " >>! version_info
2186	echo "OS version info: " >>! version_info
2187	uname -a >>&! version_info
2188	echo " " >>! version_info
2189	else if ( ( $ARCH[1] == Linux ) && ( `hostname` == master ) ) then
2190	set DEF_DIR = /big6/gill/DO_NOT_REMOVE_DIR
2191	set TMPDIR = .
2192	set MAIL = /bin/mail
2193	if ( $LINUX_COMP == PGI ) then
2194	if ( $NESTED == TRUE ) then
2195	set COMPOPTS = ( 2 4 5 )
2196	else if ( ( $NESTED != TRUE ) && ( $RSL_LITE == TRUE ) ) then
2197	set COMPOPTS = ( 1 3 6 )
2198	else if ( ( $NESTED != TRUE ) && ( $RSL_LITE != TRUE ) ) then
2199	set COMPOPTS = ( 1 3 5 )
2200	endif
2201	else if ( $LINUX_COMP == INTEL ) then
2202	if ( $NESTED == TRUE ) then
2203	set COMPOPTS = ( 8 10 11 )
2204	else if ( $NESTED != TRUE ) then
2205	set COMPOPTS = ( 7 9 11 )
2206	endif
2207	endif
2208	set Num_Procs = 4
2209	set OPENMP = 2
2210	cat >! machfile << EOF
2211	node3
2212	node3
2213	node4
2214	node4
2215	EOF
2216	set Mach = `pwd`/machfile
2217	if ( $CHEM == TRUE ) then
2218	set ZAP_OPENMP = TRUE
2219	else if ( $CHEM == FALSE ) then
2220	set ZAP_OPENMP = FALSE
2221	endif
2222	if ( $LINUX_COMP == INTEL ) then
2223	set ZAP_OPENMP = TRUE
2224	endif
2225	set MPIRUNCOMMAND = ( mpirun -v -np $Num_Procs -machinefile $Mach -nolocal )
2226	set MPIRUNCOMMANDPOST = "< /dev/null"
2227	echo "Compiler version info: " >! version_info
2228	if ( $LINUX_COMP == PGI ) then
2229	pgf90 -V >>&! version_info
2230	else if ( $LINUX_COMP == INTEL ) then
2231	ifort -v >>&! version_info
2232	endif
2233	echo " " >>! version_info
2234	echo "OS version info: " >>! version_info
2235	uname -a >>&! version_info
2236	echo " " >>! version_info
2237	else
2238	echo "Unrecognized architecture for regression test" >! error_message
2239	echo `uname` >> error_message
2240	echo `hostname` >> error_message
2241	$MAIL -s "Unknown architecture $ARCH[1] ${WHERE_AM_I} " $FAIL_MAIL < error_message
2242	exit ( 1 )
2243	endif
2244
2245	#####################################################################
2246	#DAVE###################################################
2247	echo did the arch specific stuff
2248	banner 3
2249	#set ans = "$<"
2250	#DAVE###################################################
2251
2252	if ( $FDDA == TRUE ) then
2253	if ( ( $PHYSOPTS_FDDA == GRID ) && ( $ZAP_OPENMP == FALSE ) ) then
2254	set ZAP_OPENMP = FALSE
2255	else if ( $PHYSOPTS_FDDA == BOTH ) then
2256	set ZAP_OPENMP = TRUE
2257	endif
2258	endif
2259
2260	# First of all, in which particular directory do we start.
2261
2262	cd $DEF_DIR
2263
2264	# We want to keep the old regression stuff around
2265
2266	if ( -d regression_test ) then
2267	if ( -d regression_test.old ) then
2268	/bin/rm -fr regression_test.old
2269	endif
2270	/bin/mv regression_test regression_test.old
2271	endif
2272
2273	# Go to the regression test directory
2274
2275	mkdir regression_test
2276	set ok = $status
2277	if ( $ok != 0 ) then
2278	echo "Gee, I cannot make a directory in $DEF_DIR" >! error_message
2279	echo `pwd` >> error_message
2280	echo `\ls -ls` >> error_message
2281	$MAIL -s "$DEF_DIR not writable $ARCH[1] ${WHERE_AM_I} " $FAIL_MAIL < error_message
2282	exit ( 1 )
2283	else
2284	pushd regression_test
2285	endif
2286
2287	if ( $acquire_from == "cvs" ) then
2288
2289	# Checkout the most recent version of WRF from the NCAR cvs repository,
2290	# and pick up the required input data from the anonymous ftp site.
2291
2292	cvs checkout -D $thedate WRFV3
2293	find ./WRFV3 -exec touch \{\} \;
2294	ftp -n ftp.ucar.edu < ftp_script_data
2295
2296
2297	else if ( $acquire_from == "filearg" ) then
2298
2299	# A tar file of the WRF source was provided, so that is used, along with
2300	# the required input data files from the ftp site.
2301
2302	tar xvf $thefile
2303	cd WRFV3
2304	clean -a
2305	cd ..
2306	ftp -n ftp.ucar.edu < ftp_script_data
2307
2308	else if ( $acquire_from == "environment" ) then
2309
2310	# A tar file of WRF is assumed to be available.
2311
2312	tar xvf $thefile
2313
2314	endif
2315
2316	# And we can stick the input data where we want, the WRFV3 directory has been created.
2317
2318	( cd WRFV3/test/em_real ; ln -sf $thedataem/* . )
2319	( cd WRFV3/test/nmm_real ; ln -s $thedatanmm/met_nmm* . ; \
2320	cp $thedatanmm/namelist.input.regtest . )
2321	#DAVE###################################################
2322	( cd WRFV3/test/em_real ; ls -ls )
2323	( cd WRFV3/test/nmm_real ; ls -ls )
2324	banner 4
2325	#set ans = "$<"
2326	#DAVE###################################################
2327
2328	# John-specific stuff for maple is the else; part of the "using service machines".
2329
2330	if ( ! $clrm ) then
2331	pushd WRFV3
2332	else
2333	if ( ! -d $TMPDIR ) then
2334	echo something wrong 1
2335	endif
2336	if ( ! -d $TMPDIR/RUN ) then
2337	mkdir $TMPDIR/RUN
2338	/bin/rm -fr $TMPDIR/RUN/*
2339	endif
2340	if ( -d $TMPDIR/RUN ) then
2341	tar cf - ./WRFV3/test ./WRFV3/main \| ( cd $TMPDIR/RUN ; tar xvf - )
2342	pushd WRFV3
2343	else
2344	echo something wrong 2
2345	exit
2346	endif
2347	endif
2348
2349	# Here we initialize our output message.
2350
2351	if ( -e ${DEF_DIR}/wrftest.output ) rm ${DEF_DIR}/wrftest.output
2352	echo "Architecture $ARCH[1] machine: `hostname`" >>! ${DEF_DIR}/wrftest.output
2353	echo "Test run from directory: ${WHERE_AM_I}" >>! ${DEF_DIR}/wrftest.output
2354	echo "WRFV3 source from: $acquire_from " >>! ${DEF_DIR}/wrftest.output
2355	echo "Number of OpenMP processes to use: $OPENMP" >>! ${DEF_DIR}/wrftest.output
2356	echo "Number of MPI processes to use: $Num_Procs" >>! ${DEF_DIR}/wrftest.output
2357	if ( $ARCH[1] == Darwin ) then
2358	set name = `finger $user \| grep "Name:" \| awk '{print $4 " " $5}'`
2359	else
2360	set name = ( `grep ^${user}: /etc/passwd \| cut -d: -f5` )
2361	endif
2362	echo "Test conducted by $name" >>! ${DEF_DIR}/wrftest.output
2363	echo " " >>! ${DEF_DIR}/wrftest.output
2364	echo "Test run from directory ${CUR_DIR}" >>! ${DEF_DIR}/wrftest.output
2365	echo " " >>! ${DEF_DIR}/wrftest.output
2366	if ( $?LOADL_JOB_NAME ) then
2367	echo "Loadlever job name = ${LOADL_JOB_NAME}" >>! ${DEF_DIR}/wrftest.output
2368	echo " " >>! ${DEF_DIR}/wrftest.output
2369	endif
2370	echo "Real data case for EM is from $dataset " >>! ${DEF_DIR}/wrftest.output
2371	echo " " >>! ${DEF_DIR}/wrftest.output
2372	echo "The em real and ideal forecasts will be nested: $NESTED " >>! ${DEF_DIR}/wrftest.output
2373	echo " " >>! ${DEF_DIR}/wrftest.output
2374	if ( $REG_TYPE == BIT4BIT ) then
2375	echo "This is a bit-wise (traditional) regression test. " >>! ${DEF_DIR}/wrftest.output
2376	echo " " >>! ${DEF_DIR}/wrftest.output
2377	else if ( $REG_TYPE == OPTIMIZED ) then
2378	echo "This is a fully optimized regression test. " >>! ${DEF_DIR}/wrftest.output
2379	echo "No inter-comparisons are made. " >>! ${DEF_DIR}/wrftest.output
2380	echo " " >>! ${DEF_DIR}/wrftest.output
2381	endif
2382	if ( $REAL8 == TRUE ) then
2383	echo "Floating point precision is 8-bytes" >>! ${DEF_DIR}/wrftest.output
2384	echo " " >>! ${DEF_DIR}/wrftest.output
2385	endif
2386	if ( ( $CHEM == TRUE ) && ( $KPP != TRUE ) ) then
2387	echo "WRF_CHEM tests run for em_real core only" >>! ${DEF_DIR}/wrftest.output
2388	echo " " >>! ${DEF_DIR}/wrftest.output
2389	else if ( ( $CHEM == TRUE ) && ( $KPP == TRUE ) ) then
2390	echo "WRF_CHEM KPP tests run for em_real core only" >>! ${DEF_DIR}/wrftest.output
2391	echo " " >>! ${DEF_DIR}/wrftest.output
2392	endif
2393	if ( $ADAPTIVE == TRUE ) then
2394	echo "Adaptive time step for em_real core only" >>! ${DEF_DIR}/wrftest.output
2395	echo " " >>! ${DEF_DIR}/wrftest.output
2396	endif
2397	if ( $GLOBAL == TRUE ) then
2398	echo "Global tests run for em_real core only" >>! ${DEF_DIR}/wrftest.output
2399	echo " " >>! ${DEF_DIR}/wrftest.output
2400	endif
2401	if ( $ESMF_LIB == TRUE ) then
2402	echo "A separately installed version of the latest ESMF library" >>! ${DEF_DIR}/wrftest.output
2403	echo "(NOT the ESMF library included in the WRF tarfile) will" >>! ${DEF_DIR}/wrftest.output
2404	echo "be used for MPI tests" >>! ${DEF_DIR}/wrftest.output
2405	echo " " >>! ${DEF_DIR}/wrftest.output
2406	endif
2407	if ( $QUILT == TRUE ) then
2408	echo "One WRF output quilt server will be used for some tests" >>! ${DEF_DIR}/wrftest.output
2409	echo " " >>! ${DEF_DIR}/wrftest.output
2410	endif
2411	if ( $FDDA == TRUE ) then
2412	if ( $PHYSOPTS_FDDA == GRID ) then
2413	echo "Running FDDA tests (3D & SFC grid nudging only)" >>! ${DEF_DIR}/wrftest.output
2414	echo " " >>! ${DEF_DIR}/wrftest.output
2415	else if ( $PHYSOPTS_FDDA == BOTH ) then
2416	echo "Running FDDA tests (3D&SFC=1, obs=2, 3D&SFC=3, 3D&SFC+obs=4, Spectral=5)" >>! ${DEF_DIR}/wrftest.output
2417	echo " " >>! ${DEF_DIR}/wrftest.output
2418	endif
2419	endif
2420	if ( $GENERATE_BASELINE != FALSE ) then
2421	echo "WRF output will be archived in baseline directory ${GENERATE_BASELINE} for some tests" >>! \
2422	${DEF_DIR}/wrftest.output
2423	echo " " >>! ${DEF_DIR}/wrftest.output
2424	endif
2425	if ( $COMPARE_BASELINE != FALSE ) then
2426	echo "WRF output will be compared with files in baseline directory ${COMPARE_BASELINE} for some tests" >>! \
2427	${DEF_DIR}/wrftest.output
2428	echo " " >>! ${DEF_DIR}/wrftest.output
2429	endif
2430	echo "The selected I/O option is $IO_FORM ($IO_FORM_NAME[$IO_FORM])" >>! ${DEF_DIR}/wrftest.output
2431	if ( $IO_FORM_WHICH[$IO_FORM] == IO ) then
2432	echo "This option is for both input and history files" >>! ${DEF_DIR}/wrftest.output
2433	echo " " >>! ${DEF_DIR}/wrftest.output
2434	else if ( $IO_FORM_WHICH[$IO_FORM] == I ) then
2435	echo "This option is for input files only" >>! ${DEF_DIR}/wrftest.output
2436	echo " " >>! ${DEF_DIR}/wrftest.output
2437	else if ( $IO_FORM_WHICH[$IO_FORM] == O ) then
2438	echo "This option is for history files only" >>! ${DEF_DIR}/wrftest.output
2439	echo " " >>! ${DEF_DIR}/wrftest.output
2440	endif
2441
2442	cat ${CUR_DIR}/version_info >>! ${DEF_DIR}/wrftest.output
2443
2444	# There are three WRF em executables to be considered that can run in threaded and
2445	# distributed memory. The 2d hills and 2d squall lines cannot be parallelized with
2446	# MPI, and are therefore not considered in this shell. The nmm is only run with
2447	# distributed memory (1 vs 4 procs).
2448
2449	set first_time_in = TRUE
2450	foreach core ( $CORES )
2451	#DAVE###################################################
2452	echo doing core $core
2453	banner 5
2454	#set ans = "$<"
2455	#DAVE###################################################
2456
2457	# Some sleight of hand is required for the chemistry tests because we need to
2458	# build it twice. But normally, we only build with different real vs ideal, or em vs nmm.
2459	# What to do, what to do? Well, we ask for em_real TWICE. The first time we build without chemistry
2460	# activated, the second time with it activated. The first time, we do a single
2461	# test, the second time through, we do the other 5 tests.
2462
2463	if ( ( $CHEM == TRUE ) && ( ${#CORES} == 2 ) && ( $first_time_in == TRUE ) ) then
2464	setenv WRF_CHEM 0
2465	set PHYSOPTS = ( 1 )
2466	set first_time_in = FALSE
2467	else if ( ( $CHEM == TRUE ) && ( $KPP != TRUE ) && ( ${#CORES} == 2 ) && ( $first_time_in != TRUE ) ) then
2468	setenv WRF_CHEM 1
2469	set PHYSOPTS = ( 2 3 4 5 6 )
2470	else if ( ( $CHEM == TRUE ) && ( $KPP == TRUE ) && ( ${#CORES} == 2 ) && ( $first_time_in != TRUE ) ) then
2471	setenv WRF_CHEM 1
2472	set PHYSOPTS = ( 2 3 )
2473	endif
2474
2475	# Cores to test.
2476
2477	set ZAP_SERIAL_FOR_THIS_CORE = FALSE
2478	set ZAP_OPENMP_FOR_THIS_CORE = FALSE
2479	if ( `echo $core \| cut -c 1-2` == em ) then
2480	setenv WRF_EM_CORE 1
2481	setenv WRF_NMM_CORE 0
2482	setenv WRF_COAMPS_CORE 0
2483	setenv WRF_EXP_CORE 0
2484	set ZAP_SERIAL_FOR_THIS_CORE = FALSE
2485	set ZAP_OPENMP_FOR_THIS_CORE = FALSE
2486	else if ( `echo $core \| cut -c 1-3` == nmm ) then
2487	setenv WRF_EM_CORE 0
2488	setenv WRF_NMM_CORE 1
2489	setenv WRF_COAMPS_CORE 0
2490	setenv WRF_EXP_CORE 0
2491	set ZAP_SERIAL_FOR_THIS_CORE = TRUE
2492	set ZAP_OPENMP_FOR_THIS_CORE = TRUE
2493	endif
2494
2495	# Here we are looping over all of the various compilation configurations,
2496	# such as serial only, OpenMP only, MPI only, etc. Each architecture
2497	# has its own list of these options. We build each of the executables for
2498	# this particular ${core}.
2499
2500	foreach compopt ( $COMPOPTS )
2501	#DAVE###################################################
2502	echo doing compile option $compopt
2503	banner 6
2504	#set ans = "$<"
2505	#DAVE###################################################
2506
2507	# We sometimes are interested in bypassing the OpenMP option.
2508
2509	if ( $compopt == $COMPOPTS[2] ) then
2510	if ( $ZAP_OPENMP == TRUE \|\| $ZAP_OPENMP_FOR_THIS_CORE == TRUE ) then
2511	goto GOT_THIS_EXEC
2512	endif
2513	endif
2514
2515	# NMM only runs parallel
2516	if ( $compopt == $COMPOPTS[1] ) then
2517	if ( $ZAP_SERIAL == TRUE \|\| $ZAP_SERIAL_FOR_THIS_CORE == TRUE ) then
2518	goto GOT_THIS_EXEC
2519	endif
2520	endif
2521
2522	if ( `uname` == AIX ) goto BUILD_REGARDLESS
2523
2524	# Did we already build this one?
2525
2526	if ( $core == em_real ) then
2527	if ( ( $compopt == $COMPOPTS[1] ) && \
2528	( -e main/wrf_${core}.exe.$compopt ) && \
2529	( -e main/real_${core}.exe.1 ) && \
2530	( -e ${DEF_DIR}/regression_test/WRFV3/external/$IO_FORM_NAME[$IO_FORM]/diffwrf ) ) then
2531	goto GOT_THIS_EXEC
2532	else if ( ( $compopt != $COMPOPTS[1] ) && \
2533	( -e main/wrf_${core}.exe.$compopt ) && \
2534	( -e ${DEF_DIR}/regression_test/WRFV3/external/$IO_FORM_NAME[$IO_FORM]/diffwrf ) ) then
2535	goto GOT_THIS_EXEC
2536	endif
2537	else
2538	if ( ( $compopt == $COMPOPTS[1] ) && \
2539	( -e main/wrf_${core}.exe.$compopt ) && \
2540	( -e main/ideal_${core}.exe.1 ) && \
2541	( -e ${DEF_DIR}/regression_test/WRFV3/external/$IO_FORM_NAME[$IO_FORM]/diffwrf ) ) then
2542	goto GOT_THIS_EXEC
2543	else if ( ( $compopt != $COMPOPTS[1] ) && \
2544	( -e main/wrf_${core}.exe.$compopt ) && \
2545	( -e ${DEF_DIR}/regression_test/WRFV3/external/$IO_FORM_NAME[$IO_FORM]/diffwrf ) ) then
2546	goto GOT_THIS_EXEC
2547	endif
2548	endif
2549
2550	BUILD_REGARDLESS:
2551
2552	# The WRF configuration file works with a single integer
2553	# input, which is the compiler option. By convention, option $COMPOPTS[1] is
2554	# serial, $COMPOPTS[2] is OMP, and $COMPOPTS[3] is MPI.
2555
2556	# Print info about use of separately installed ESMF library.
2557	set esmf_lib_str = " - - - - - - - - - - - - - "
2558	if ( $ESMF_LIB == TRUE ) then
2559	# only test ESMF with MPI
2560	if ( $compopt == $COMPOPTS[3] ) then
2561	echo "A separately installed version of the latest ESMF library" >>! ${DEF_DIR}/wrftest.output
2562	echo "(NOT the ESMF library included in the WRF tarfile) is" >>! ${DEF_DIR}/wrftest.output
2563	echo "being used for this test of $core parallel $compopt..." >>! ${DEF_DIR}/wrftest.output
2564	set esmf_lib_str = "using separate ESMF library"
2565	echo "Setting ESMFLIB = ${ESMFLIBSAVE}" >>! ${DEF_DIR}/wrftest.output
2566	echo "Setting ESMFINC = ${ESMFINCSAVE}" >>! ${DEF_DIR}/wrftest.output
2567	setenv ESMFLIB $ESMFLIBSAVE
2568	setenv ESMFINC $ESMFINCSAVE
2569	else
2570	unsetenv ESMFLIB
2571	unsetenv ESMFINC
2572	endif
2573	endif
2574
2575	#DAVE###################################################
2576	echo start build mechanism
2577	banner 7
2578	#set ans = "$<"
2579	#DAVE###################################################
2580	./clean -a
2581
2582	# Edit build command for either bit-wise comparison or full optimization.
2583
2584	if ( $REG_TYPE == BIT4BIT ) then
2585	set DEBUG_FLAG = -d
2586	else
2587	set DEBUG_FLAG =
2588	endif
2589
2590	# Edit build command. If this is a nested run, then either static nest
2591	# (idealized) or prescribed move (em_real). If not nested, then shut off
2592	# the nesting build option.
2593
2594	if ( $NESTED == TRUE ) then
2595	if ( $core == em_real ) then
2596	set compopts_nest = $COMPOPTS_NEST_PRESCRIBED
2597	else
2598	set compopts_nest = $COMPOPTS_NEST_STATIC
2599	endif
2600	else
2601	set compopts_nest = $COMPOPTS_NO_NEST
2602	endif
2603
2604	./configure $DEBUG_FLAG << EOF
2605	$compopt
2606	$compopts_nest
2607	EOF
2608	cp configure.wrf configure.wrf.core=${core}_build=${compopt}
2609
2610	# The configure.wrf file needs to be adjusted as to whether we are requesting real4 or real8
2611	# as the default floating precision.
2612
2613	if ( $REAL8 == TRUE ) then
2614	sed -e '/^RWORDSIZE/s/\$(NATIVE_RWORDSIZE)/8/' configure.wrf > ! foo ; /bin/mv foo configure.wrf
2615	endif
2616
2617	# For AIX, remove the MASSV libs for bit-wise comparisons.
2618
2619	if ( ( `uname` == AIX ) && ( $REG_TYPE == BIT4BIT ) ) then
2620	sed -e '/^LDFLAGS_LOCAL/s/-lmass -lmassv/ /' \
2621	-e '/^ARCH_LOCAL/s/-DNATIVE_MASSV/ /' \
2622	configure.wrf > ! foo ; /bin/mv foo configure.wrf
2623	endif
2624
2625	# Fix the OpenMP default for IBM regression testing - noopt required for bit-wise comparison.
2626
2627	# this should not be needed any more, with changes to have only OMP modules compiled with -qsmp=noauto. JM 20090217
2628	# if ( ( $compopt == $COMPOPTS[2] ) && ( `uname` == AIX ) ) then
2629	# sed -e '/^OMP/s/-qsmp=noauto/-qsmp=noauto:noopt/' configure.wrf > ! foo ; /bin/mv foo configure.wrf
2630	# endif
2631
2632	# A special flag to insure the same results from a random number used in the SAS CU scheme.
2633
2634	sed -e '/^ARCH_LOCAL/s/=/= -DREGTEST /' configure.wrf > ! foo ; /bin/mv foo configure.wrf
2635
2636	# Save the configure file.
2637
2638	cp configure.wrf configure.wrf.core=${core}_build=${compopt}
2639
2640	#DAVE###################################################
2641	echo configure built with optim mods removed, ready to compile
2642	banner 8
2643	#set ans = "$<"
2644	#DAVE###################################################
2645
2646	# The WRF_SRC_ROOT_DIR hack is only used by the OSF1 build.
2647	# It works around the annoying fact that in OSF1 $(PWD) does
2648	# not change during execution of regtest.csh, despite the "cd"
2649	# and "pushd" commands.
2650	setenv WRF_SRC_ROOT_DIR "${DEF_DIR}/regression_test/WRFV3"
2651	# Build this executable
2652
2653	./compile $core >&! compile_${core}_build=${compopt}.log
2654	#DAVE###################################################
2655	echo compile done
2656	banner 9
2657	#set ans = "$<"
2658	#DAVE###################################################
2659
2660	# Did the compile work? Check the expected executable names and locations.
2661
2662	set ok = $status
2663	if ( ! -x main/wrf.exe ) set ok = 1
2664
2665	if ( ( $core == em_real ) && ( $compopt == $COMPOPTS[1] ) ) then
2666	if ( ! -e main/real.exe ) set ok = 1
2667	else if ( ( $core == nmm_real ) && ( $compopt == $COMPOPTS[3] ) ) then
2668	if ( ! -e main/real_nmm.exe ) set ok = 1
2669	else if ( $compopt == $COMPOPTS[1] ) then
2670	if ( ! -e main/ideal.exe ) set ok = 1
2671	endif
2672
2673	if ( ! -x external/io_netcdf/diffwrf ) set ok = 1
2674	# if ( ! -x external/io_int/diffwrf ) set ok = 1
2675
2676	if ( $ok != 0 ) then
2677	echo "SUMMARY compilation for $core parallel $compopt $esmf_lib_str FAIL" >>! ${DEF_DIR}/wrftest.output
2678	$MAIL -s "REGRESSION FAILURE $ARCH[1] ${WHERE_AM_I} " $FAIL_MAIL < ${DEF_DIR}/wrftest.output
2679	exit ( 3 )
2680	else
2681	echo "SUMMARY compilation for $core parallel $compopt $esmf_lib_str PASS" >>! ${DEF_DIR}/wrftest.output
2682	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
2683	mv main/wrf.exe main/wrf_${core}.exe.$compopt
2684	if ( ( $core == em_real ) && ( $compopt == $COMPOPTS[1] ) ) then
2685	mv main/real.exe main/real_${core}.exe.1
2686	else if ( ( $core == nmm_real ) && ( $compopt == $COMPOPTS[3] ) ) then
2687	mv main/real_nmm.exe main/real_${core}.exe.$COMPOPTS[3]
2688	else if ( $compopt == $COMPOPTS[1] ) then
2689	mv main/ideal.exe main/ideal_${core}.exe.1
2690	endif
2691	#DAVE###################################################
2692	echo exec exists
2693	ls -ls main/.exe
2694	banner 10
2695	#set ans = "$<"
2696	#DAVE###################################################
2697	endif
2698
2699	GOT_THIS_EXEC:
2700
2701	if ( $clrm ) then
2702	cp main/exe $TMPDIR/RUN/WRFV3/main
2703	endif
2704
2705	end
2706
2707	if ( $clrm ) then
2708	pushd $TMPDIR/RUN/WRFV3
2709	endif
2710
2711	# We have all of the executables built, now we run'em. This is a loop
2712	# over all of the various physics options for this particular
2713	# ${core}. Inside the physics loop, we loop over the parallel options.
2714	# This allows us to use the same WRF input files for each of the parallel
2715	# choices for a single physics loop index.
2716
2717	foreach phys_option ( $PHYSOPTS )
2718	#DAVE###################################################
2719	echo which phys option $phys_option
2720	banner 11
2721	#set ans = "$<"
2722	#DAVE###################################################
2723
2724	# For each of the executables, we need to run several physics
2725	# options.
2726
2727	if ( $core == em_real ) then
2728
2729	if ( $CHEM != TRUE ) then
2730	set filetag=$filetag_real
2731	else if ( $CHEM == TRUE ) then
2732	if ( $phys_option <= 3 ) then
2733	set filetag=$filetag_real[1]
2734	else
2735	set filetag=$filetag_real[2]
2736	endif
2737	endif
2738
2739	foreach compopt ( $COMPOPTS )
2740	#DAVE###################################################
2741	echo real if filetag is $filetag
2742	echo compopt = $compopt
2743	banner 12
2744	#set ans = "$<"
2745	#DAVE###################################################
2746
2747	# We sometimes are interested in bypassing the OpenMP option.
2748
2749	if ( $compopt == $COMPOPTS[2] ) then
2750	if ( $ZAP_OPENMP == TRUE \|\| $ZAP_OPENMP_FOR_THIS_CORE == TRUE ) then
2751	goto BYPASS_COMP_LOOP_REAL
2752	endif
2753	endif
2754
2755	if ( $compopt == $COMPOPTS[1] ) then
2756	if ( $ZAP_SERIAL == TRUE \|\| $ZAP_SERIAL_FOR_THIS_CORE == TRUE ) then
2757	goto BYPASS_COMP_LOOP_REAL
2758	endif
2759	endif
2760
2761	pushd test/$core
2762
2763	#
2764	# Create the correct namelist.input file for real data cases.
2765	#
2766
2767	if ( $CHEM != TRUE ) then
2768	cp ${CUR_DIR}/phys_real_${phys_option} phys_opt
2769	if ( $NESTED != TRUE ) then
2770	cp ${CUR_DIR}/dyn_real_${phys_option} dyn_opt
2771	else
2772	cp ${CUR_DIR}/dyn_real_SAFE dyn_opt
2773	endif
2774	cp ${CUR_DIR}/time_real_${phys_option} time_opt
2775	cp ${CUR_DIR}/dom_real dom_real
2776	cp ${CUR_DIR}/nest_real_${phys_option} nest_input_opt
2777	cp ${CUR_DIR}/damp_real_${phys_option} damp_real
2778	if ( -e fdda_opt ) rm fdda_opt
2779	cat " grid_fdda=0" > fdda_opt
2780	if ( -e fdda_time ) rm fdda_time
2781
2782	if ( $FDDA == TRUE ) then
2783	cp ${CUR_DIR}/fdda_real_${phys_option} fdda_opt
2784	cp ${CUR_DIR}/fdda_real_time_${phys_option} fdda_time
2785	endif
2786
2787	set time_step = `awk ' /^ time_step /{ print $3 } ' namelist.input.$dataset \| cut -d, -f1`
2788
2789	# Wanna do more/less time steps on the real cases? Easy. Those last two numbers
2790	# in the eqns are all you need. Their product must be 60. So, instead of 3 and 20,
2791	# (3 coarse grid timesteps), you could use 20 and 3 (20 coarse grid time steps).
2792
2793	if ( $NESTED == TRUE ) then
2794	@ run_seconds = $time_step * 3
2795	@ history_interval = $time_step / 20
2796	else if ( $NESTED != TRUE ) then
2797	@ run_seconds = $time_step * 10
2798	@ history_interval = $time_step / 6
2799	endif
2800	rm ed_in namelist.input.temp
2801	cat >! ed_in << EOF
2802	g/run_seconds/s/[0-9]/$run_seconds
2803	g/history_interval/s/[0-9][0-9][0-9]/$history_interval
2804	w namelist.input.temp
2805	q
2806	EOF
2807	ed namelist.input.$dataset < ed_in
2808
2809	cp ${CUR_DIR}/io_format io_format
2810	sed -e '/^ mp_physics/,/ensdim/d' -e '/^ &physics/r ./phys_opt' \
2811	-e '/^ moist_adv_opt/,/scalar_adv_opt/d' -e '/^ non_hydrostatic/r ./dyn_opt' \
2812	-e '/^ auxinput1_inname/d' -e '/^ debug_level/r ./time_opt' \
2813	-e '/^ input_from_file/d' -e '/^ interval_seconds/r ./nest_input_opt' \
2814	-e '/^ time_step /,/^ smooth_option/d' -e '/^ &domains/r ./dom_real' \
2815	-e '/^ damp_opt /,/^ dampcoef/d' -e '/^ base_temp/r ./damp_real' \
2816	-e '/^ io_form_history /,/^ io_form_boundary/d' -e '/^ restart_interval/r ./io_format' \
2817	-e 's/ frames_per_outfile = [0-9][0-9]/ frames_per_outfile = 200/g' \
2818	-e 's/ run_days = [0-9][0-9]/ run_days = 0/g' \
2819	-e 's/ run_hours = [0-9][0-9]/ run_hours = 0/g' \
2820	-e 's/ run_minutes = [0-9][0-9]/ run_minutes = 0/g' \
2821	-e '/^ &fdda/r fdda_opt' \
2822	-e '/^ debug_level/r fdda_time' \
2823	-e '/dyn_opt/d' \
2824	namelist.input.temp >! namelist.input
2825
2826	# The chem run has its own namelist, due to special input files (io_form not tested for chem)
2827
2828	else if ( $CHEM == TRUE ) then
2829	if ( ( $KPP == TRUE ) && ( $phys_option >= 3 ) ) then
2830	sed -e '/dyn_opt/d' \
2831	-e 's/^ chem_opt = [0-9][0-9]/ chem_opt = '${CHEM_OPT}'/' \
2832	namelist.input.chem_test_${phys_option} >! namelist.input
2833	else
2834	sed -e '/dyn_opt/d' \
2835	namelist.input.chem_test_${phys_option} >! namelist.input
2836	endif
2837
2838	if ( -e met_em.d01.${filetag} ) then
2839	\rm met_em.d01.*
2840	endif
2841	if ( ${phys_option} <= 3 ) then
2842	ln -s 00z/met_em* .
2843	else
2844	ln -s 12z/met_em* .
2845	endif
2846
2847	endif
2848
2849	# WRF output quilt servers are only tested for MPI configuration.
2850	# Currently, only one WRF output quilt server is used.
2851
2852	if ( $QUILT == TRUE ) then
2853	if ( $compopt == $COMPOPTS[3] ) then
2854	# For now, test only one group of one output quilt servers.
2855	sed -e 's/ nio_tasks_per_group = [0-9][0-9]*/ nio_tasks_per_group = 1/g' \
2856	-e 's/ nio_groups = [0-9][0-9]*/ nio_groups = 1/g' \
2857	namelist.input >! namelist.input.temp
2858	mv -f namelist.input.temp namelist.input
2859	echo "Building namelist.input.$core.${phys_option}.$compopt with one I/O quilt server enabled."
2860	echo "NOTE one I/O quilt server enabled for $core physics $phys_option parallel $compopt..." >>! ${DEF_DIR}/wrftest.output
2861	endif
2862	endif
2863
2864	/bin/cp namelist.input $TMPDIR/namelist.input.$core.${phys_option}.$compopt
2865	#DAVE###################################################
2866	echo built namelist $TMPDIR/namelist.input.$core.${phys_option}.$compopt
2867	cat $TMPDIR/namelist.input.$core.${phys_option}.$compopt
2868	echo need history interval to be 30
2869	banner 13
2870	#set ans = "$<"
2871	#DAVE###################################################
2872	#DAVE###################################################
2873	echo skipped link of data files, we push them elsewhere
2874	ls -ls met_em*
2875	banner 14
2876	#set ans = "$<"
2877	#DAVE###################################################
2878
2879	# If this is the serial code, generate the IC and BC. The real.exe program is not
2880	# parallelized, so the data is generated and saved for the rest of the parallel tests.
2881	# This data is necessarily updated for each of the physics tests.
2882
2883	if ( $compopt == $COMPOPTS[1] ) then
2884
2885	# Zap any old input data laying around.
2886
2887	rm wrfinput_d01 >& /dev/null
2888	rm wrfbdy_d01 >& /dev/null
2889
2890	if ( $NESTED == TRUE ) then
2891	setenv OMP_NUM_THREADS 1
2892	$SERIALRUNCOMMAND ../../main/real_${core}.exe.1 >! print.out.real_${core}_Phys=${phys_option}_Parallel=${compopt}
2893	else if ( $NESTED != TRUE ) then
2894	../../main/real_${core}.exe.1 >! print.out.real_${core}_Phys=${phys_option}_Parallel=${compopt}
2895	endif
2896	#DAVE###################################################
2897	echo finished real
2898	banner 15
2899	#set ans = "$<"
2900	#DAVE###################################################
2901
2902	grep "SUCCESS COMPLETE" print.out.real_${core}_Phys=${phys_option}_Parallel=${compopt} >& /dev/null
2903	set success = $status
2904
2905	# Did making the IC BC files work?
2906
2907	if ( $GLOBAL == FALSE ) then
2908	if ( ( -e wrfinput_d01 ) && ( -e wrfbdy_d01 ) && ( $success == 0 ) ) then
2909	echo "SUMMARY generate IC/BC for $core physics $phys_option parallel $compopt $esmf_lib_str PASS" >>! ${DEF_DIR}/wrftest.output
2910	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
2911	else
2912	echo "SUMMARY generate IC/BC for $core physics $phys_option parallel $compopt $esmf_lib_str FAIL" >>! ${DEF_DIR}/wrftest.output
2913	$MAIL -s "WRF FAIL making IC/BC $ARCH[1] ${WHERE_AM_I} " $FAIL_MAIL < ${DEF_DIR}/wrftest.output
2914	if ( $KEEP_ON_RUNNING == FALSE ) exit ( 4 )
2915	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
2916	endif
2917	else if ( $GLOBAL == TRUE ) then
2918	if ( ( -e wrfinput_d01 ) && ( $success == 0 ) ) then
2919	echo "SUMMARY generate IC for $core physics $phys_option parallel $compopt $esmf_lib_str PASS" >>! ${DEF_DIR}/wrftest.output
2920	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
2921	else
2922	echo "SUMMARY generate IC for $core physics $phys_option parallel $compopt $esmf_lib_str FAIL" >>! ${DEF_DIR}/wrftest.output
2923	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
2924	$MAIL -s "WRF FAIL making IC $ARCH[1] ${WHERE_AM_I} " $FAIL_MAIL < ${DEF_DIR}/wrftest.output
2925	if ( $KEEP_ON_RUNNING == FALSE ) exit ( 41 )
2926	endif
2927	endif
2928	#DAVE###################################################
2929	echo IC BC must be OK
2930	ls -ls wrfi* wrfb*
2931	if ( $IO_FORM_NAME[$IO_FORM] == io_netcdf ) then
2932	ncdump -v Times wrfb* \| tail -20
2933	endif
2934	banner 16
2935	#set ans = "$<"
2936	#DAVE###################################################
2937	endif
2938
2939	# Run the forecast for this core, physics package and parallel option
2940
2941	rm $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$compopt >& /dev/null
2942
2943	# The chem run has its own set of namelists, due to special input files.
2944
2945	if ( $CHEM == TRUE ) then
2946
2947	# WRF output quilt servers are only tested for MPI configuration.
2948	# Currently, only one WRF output quilt server is used.
2949
2950	if ( $QUILT == TRUE ) then
2951	if ( $compopt == $COMPOPTS[3] ) then
2952	# For now, test only one group of one output quilt servers.
2953	sed -e 's/ nio_tasks_per_group = [0-9][0-9]*/ nio_tasks_per_group = 1/g' \
2954	-e 's/ nio_groups = [0-9][0-9]*/ nio_groups = 1/g' \
2955	namelist.input >! namelist.input.temp
2956	mv -f namelist.input.temp namelist.input
2957	echo "Building namelist.input.$core.${phys_option}.$compopt with one I/O quilt server enabled."
2958	echo "NOTE one I/O quilt server enabled for $core physics $phys_option parallel $compopt..." >>! ${DEF_DIR}/wrftest.output
2959	endif
2960	endif
2961	endif
2962
2963	if ( $compopt == $COMPOPTS[1] ) then
2964	setenv OMP_NUM_THREADS 1
2965	if ( $NESTED == TRUE ) then
2966	$SERIALRUNCOMMAND ../../main/wrf_${core}.exe.$compopt >! print.out.wrf_${core}_Phys=${phys_option}_Parallel=${compopt}
2967	else if ( $NESTED != TRUE ) then
2968	../../main/wrf_${core}.exe.$compopt >! print.out.wrf_${core}_Phys=${phys_option}_Parallel=${compopt}
2969	endif
2970	else if ( $compopt == $COMPOPTS[2] ) then
2971	setenv OMP_NUM_THREADS $OPENMP
2972	if ( $NESTED == TRUE ) then
2973	$OMPRUNCOMMAND ../../main/wrf_${core}.exe.$compopt >! print.out.wrf_${core}_Phys=${phys_option}_Parallel=${compopt}
2974	else if ( $NESTED != TRUE ) then
2975	../../main/wrf_${core}.exe.$compopt >! print.out.wrf_${core}_Phys=${phys_option}_Parallel=${compopt}
2976	endif
2977	else if ( $compopt == $COMPOPTS[3] ) then
2978	setenv OMP_NUM_THREADS 1
2979	$MPIRUNCOMMAND ../../main/wrf_${core}.exe.$compopt $MPIRUNCOMMANDPOST
2980	mv rsl.error.0000 print.out.wrf_${core}_Phys=${phys_option}_Parallel=${compopt}
2981	endif
2982	#DAVE###################################################
2983	echo ran wrf fcst compopt = $compopt
2984	banner 17
2985	#set ans = "$<"
2986	#DAVE###################################################
2987
2988	grep "SUCCESS COMPLETE" print.out.wrf_${core}_Phys=${phys_option}_Parallel=${compopt}
2989	set success = $status
2990
2991	# Did making the forecast work, by that, we mean "is there an output file created", and "are there 2 times periods".
2992
2993	if ( ( -e wrfout_d01_${filetag} ) && ( $success == 0 ) ) then
2994	if ( $IO_FORM_NAME[$IO_FORM] == io_netcdf ) then
2995	ncdump -h wrfout_d01_${filetag} \| grep Time \| grep UNLIMITED \| grep currently \| grep -q 2
2996	set ok = $status
2997	set found_nans = 1
2998	if ( `uname` == AIX ) then
2999	ncdump wrfout_d01_${filetag} \| grep NaN >& /dev/null
3000	set found_nans = $status
3001	else if ( `uname` == OSF1 ) then
3002	ncdump wrfout_d01_${filetag} \| grep nan >& /dev/null
3003	# set found_nans = $status
3004	else if ( `uname` == Linux ) then
3005	ncdump wrfout_d01_${filetag} \| grep nan >& /dev/null
3006	set found_nans = $status
3007	endif
3008	if ( $found_nans == 0 ) then
3009	echo found nans
3010	set ok = 1
3011	endif
3012
3013	else if ( $IO_FORM_NAME[$IO_FORM] == io_grib1 ) then
3014	# set joe_times = `../../external/io_grib1/wgrib.exe -s -4yr wrfout_d01_${filetag} \| grep -v ":anl:" \| wc -l`
3015	# if ( $joe_times >= 100 ) then
3016	set joe_times = `../../external/io_grib1/wgrib.exe -s -4yr wrfout_d01_${filetag} \| grep "UGRD:10 m" \| wc -l`
3017	if ( $joe_times == 2 ) then
3018	set ok = 0
3019	else
3020	set ok = 1
3021	endif
3022	endif
3023	if ( $ok == 0 ) then
3024	echo "SUMMARY generate FCST for $core physics $phys_option parallel $compopt $esmf_lib_str PASS" >>! ${DEF_DIR}/wrftest.output
3025	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3026	else
3027	echo "SUMMARY generate FCST for $core physics $phys_option parallel $compopt $esmf_lib_str FAIL" >>! ${DEF_DIR}/wrftest.output
3028	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3029	$MAIL -s "WRF FAIL FCST $ARCH[1] ${WHERE_AM_I} " $FAIL_MAIL < ${DEF_DIR}/wrftest.output
3030	if ( $KEEP_ON_RUNNING == FALSE ) exit ( 5 )
3031	endif
3032	else
3033	echo "SUMMARY generate FCST for $core physics $phys_option parallel $compopt $esmf_lib_str FAIL" >>! ${DEF_DIR}/wrftest.output
3034	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3035	$MAIL -s "WRF FAIL FCST $ARCH[1] ${WHERE_AM_I} " $FAIL_MAIL < ${DEF_DIR}/wrftest.output
3036	if ( $KEEP_ON_RUNNING == FALSE ) exit ( 6 )
3037	endif
3038	#DAVE###################################################
3039	echo success or failure of fcst
3040	if ( $IO_FORM_NAME[$IO_FORM] == io_netcdf ) then
3041	ncdump -v Times wrfout_d01_${filetag} \| tail -20
3042	endif
3043	banner 18
3044	#set ans = "$<"
3045	#DAVE###################################################
3046
3047	# We have to save this output file for our biggy comparison after all of the
3048	# parallel options have been considered.
3049
3050	mv wrfout_d01_${filetag} $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$compopt
3051
3052	# To save space, we move the executables after we are finished with them.
3053
3054	if ( $phys_option == $PHYSOPTS[${#PHYSOPTS}] ) then
3055	mv ../../main/wrf_${core}.exe.$compopt $TMPDIR/wrf_${core}.exe.$compopt
3056	endif
3057
3058	popd
3059
3060	BYPASS_COMP_LOOP_REAL:
3061
3062	end
3063
3064	else if ( $core == nmm_real ) then
3065	#DAVE###################################################
3066	echo doing nmm pre
3067	banner 19
3068	#set ans = "$<"
3069	#DAVE###################################################
3070
3071	set compopt = $COMPOPTS[3] # ! parallel only
3072	set filetag = 2008-12-02_12:00:00
3073	set phys_option=1
3074	pushd test/$core
3075
3076	#DAVE###################################################
3077	echo did rms
3078	echo $filetag $phys_option
3079	banner 19a
3080	#set ans = "$<"
3081	#DAVE###################################################
3082
3083	# Build NMM namelist
3084
3085	cp ${CUR_DIR}/io_format io_format
3086	sed -e '/^ io_form_history /,/^ io_form_boundary/d' -e '/^ restart_interval/r ./io_format' \
3087	namelist.input.regtest >! namelist.input.temp
3088
3089	# A fairly short forecast, 10 time steps
3090
3091	sed -e 's/^ run_days = [0-9]*/ run_days = 0 /' \
3092	-e 's/^ run_hours = [0-9]*/ run_hours = 0 /' \
3093	-e 's/^ run_seconds = [0-9]*/ run_seconds = 900 /' \
3094	-e 's/^ history_interval = [0-9][0-9]*/ history_interval = 15 /' \
3095	-e 's/^ frames_per_outfile = [0-9]/ frames_per_outfile = 200/g' \
3096	namelist.input.temp >! namelist.input
3097
3098	#DAVE###################################################
3099	echo did cp of namelist
3100	ls -ls namelist.input
3101	cat namelist.input
3102	banner 19b
3103	#set ans = "$<"
3104	#DAVE###################################################
3105
3106	# Generate IC/BC for NMM run
3107
3108	set RUNCOMMAND = `echo $MPIRUNCOMMAND \| sed "s/$Num_Procs/1/"`
3109
3110	# Zap any old input data laying around.
3111
3112	rm wrfinput_d01 >& /dev/null
3113	rm wrfbdy_d01 >& /dev/null
3114
3115	$RUNCOMMAND ../../main/real_${core}.exe.$COMPOPTS[3] >! print.out.real_${core}_Phys=${phys_option}_Parallel=$COMPOPTS[3]
3116	#DAVE###################################################
3117	echo finished real
3118	banner 19c
3119	#set ans = "$<"
3120	#DAVE###################################################
3121
3122	mv rsl.out.0000 print.out.real_${core}_Phys=${phys_option}_Parallel=${compopt}
3123	grep "SUCCESS COMPLETE" print.out.real_${core}_Phys=${phys_option}_Parallel=${compopt} >& /dev/null
3124	set success = $status
3125
3126	# Did making the IC BC files work?
3127
3128	if ( ( -e wrfinput_d01 ) && ( -e wrfbdy_d01 ) && ( $success == 0 ) ) then
3129	echo "SUMMARY generate IC/BC for $core physics $phys_option parallel $compopt $esmf_lib_str PASS" >>! ${DEF_DIR}/wrftest.output
3130	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3131	else
3132	echo "SUMMARY generate IC/BC for $core physics $phys_option parallel $compopt $esmf_lib_str FAIL" >>! ${DEF_DIR}/wrftest.output
3133	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3134	$MAIL -s "WRF FAIL making IC/BC $ARCH[1] ${WHERE_AM_I} " $FAIL_MAIL < ${DEF_DIR}/wrftest.output
3135	if ( $KEEP_ON_RUNNING == FALSE ) exit ( 4 )
3136	endif
3137	#DAVE###################################################
3138	echo IC BC must be OK
3139	ls -lsL wrfinput* wrfb*
3140	if ( $IO_FORM_NAME[$IO_FORM] == io_netcdf ) then
3141	ncdump -v Times wrfb* \| tail -20
3142	endif
3143	banner 20
3144	#set ans = "$<"
3145	#DAVE###################################################
3146
3147	# Run on 1 and then on Num_Procs processors
3148
3149	foreach n ( 1 $Num_Procs )
3150	#DAVE###################################################
3151	echo running nmm on $n procs
3152	banner 21
3153	#set ans = "$<"
3154	#DAVE###################################################
3155
3156	if ( ( $n != 1 ) && ( $QUILT != TRUE ) ) then
3157	@ nmm_proc = $Num_Procs
3158	cat >! nproc_xy << EOF
3159	nproc_x = $nmm_proc
3160	nproc_y = 1
3161	EOF
3162	sed -e '/^ numtiles/r nproc_xy' namelist.input >! file.foo
3163	mv file.foo namelist.input
3164	else if ( ( $n != 1 ) && ( $QUILT == TRUE ) ) then
3165	@ nmm_proc = $Num_Procs - 1
3166	cat >! nproc_xy << EOF
3167	nproc_x = $nmm_proc
3168	nproc_y = 1
3169	EOF
3170	sed -e '/^ numtiles/r nproc_xy' namelist.input >! file.foo
3171	mv file.foo namelist.input
3172	endif
3173
3174	if ( `uname` == AIX ) then
3175	set RUNCOMMAND = $MPIRUNCOMMAND
3176	else
3177	set RUNCOMMAND = `echo $MPIRUNCOMMAND \| sed "s/$Num_Procs/$n/"`
3178	endif
3179
3180	# WRF output quilt servers are only tested for MPI configuration.
3181	# Currently, only one WRF output quilt server is used.
3182
3183	if ( ( $QUILT == TRUE ) && ( $n == $Num_Procs ) ) then
3184	if ( $compopt == $COMPOPTS[3] ) then
3185	# For now, test only one group of one output quilt servers.
3186	sed -e 's/ nio_tasks_per_group = [0-9]*/ nio_tasks_per_group = 1/g' \
3187	-e 's/ nio_groups = [0-9]*/ nio_groups = 1/g' \
3188	namelist.input >! namelist.input.temp
3189	mv -f namelist.input.temp namelist.input
3190	echo "Building namelist.input.$core.${phys_option}.$compopt with one I/O quilt server enabled."
3191	echo "NOTE one I/O quilt server enabled for $core physics $phys_option parallel $compopt..." >>! ${DEF_DIR}/wrftest.output
3192	endif
3193	endif
3194
3195	# NMM can fail on spurious fp exceptions that don't affect soln. Retry if necessary.
3196
3197	set tries=0
3198	while ( $tries < 2 )
3199	#DAVE###################################################
3200	echo try attempt $tries allowed to be less than 2
3201	banner 22
3202	#set ans = "$<"
3203	#DAVE###################################################
3204	@ tries = $tries + 1
3205	$RUNCOMMAND ../../main/wrf_${core}.exe.$compopt $MPIRUNCOMMANDPOST
3206	mv rsl.error.0000 print.out.wrf_${core}_Phys=${phys_option}_Parallel=${compopt}_${n}p
3207	grep "SUCCESS COMPLETE" print.out.wrf_${core}_Phys=${phys_option}_Parallel=${compopt}_${n}p
3208	set success = $status
3209	set ok = $status
3210	if ( ( -e wrfout_d01_${filetag} ) && ( $success == 0 ) ) then
3211	if ( $IO_FORM_NAME[$IO_FORM] == io_netcdf ) then
3212	ncdump -h wrfout_d01_${filetag} \| grep Time \| grep UNLIMITED \| grep currently \| grep -q 2
3213	set ok = $status
3214	set found_nans = 1
3215	if ( `uname` == AIX ) then
3216	ncdump wrfout_d01_${filetag} \| grep NaN >& /dev/null
3217	set found_nans = $status
3218	else if ( `uname` == OSF1 ) then
3219	ncdump wrfout_d01_${filetag} \| grep nan >& /dev/null
3220	# set found_nans = $status
3221	else if ( `uname` == Linux ) then
3222	ncdump wrfout_d01_${filetag} \| grep nan >& /dev/null
3223	set found_nans = $status
3224	endif
3225	if ( $found_nans == 0 ) then
3226	echo found nans
3227	set ok = 1
3228	endif
3229
3230	else if ( $IO_FORM_NAME[$IO_FORM] == io_grib1 ) then
3231	../../external/io_grib1/wgrib.exe -s -4yr wrfout_d01_${filetag} \| grep "UGRD:10 m above gnd:3600 sec fcst"
3232	set ok = $status
3233	endif
3234	if ( $ok == 0 ) then
3235	echo "SUMMARY generate FCST for $core physics $phys_option parallel $compopt $esmf_lib_str PASS" >>! ${DEF_DIR}/wrftest.output
3236	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3237	set tries=2 # success, bail from loop
3238	else
3239	echo "SUMMARY generate FCST for $core physics $phys_option parallel $compopt $esmf_lib_str FAIL" >>! ${DEF_DIR}/wrftest.output
3240	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3241	$MAIL -s "WRF FAIL FCST $ARCH[1] ${WHERE_AM_I} " $FAIL_MAIL < ${DEF_DIR}/wrftest.output
3242	if ( if ( $KEEP_ON_RUNNING == FALSE ) && ( $tries == 2 ) )exit ( 5 )
3243	endif
3244	else
3245	echo "SUMMARY generate FCST for $core physics $phys_option parallel $compopt $esmf_lib_str FAIL" >>! ${DEF_DIR}/wrftest.output
3246	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3247	$MAIL -s "WRF FAIL FCST $ARCH[1] ${WHERE_AM_I} " $FAIL_MAIL < ${DEF_DIR}/wrftest.output
3248	if ( ( $KEEP_ON_RUNNING == FALSE ) && ( $tries == 2 ) ) exit ( 6 )
3249	endif
3250	mv wrfout_d01_${filetag} $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.${compopt}_${n}p
3251	#DAVE###################################################
3252	echo did nmm fcst
3253	ls -ls $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.${compopt}_${n}p
3254	banner 23
3255	#set ans = "$<"
3256	#DAVE###################################################
3257	end
3258	end
3259
3260	popd
3261
3262	else
3263
3264	#DAVE###################################################
3265	echo doing ideal runs
3266	banner 24
3267	#set ans = "$<"
3268	#DAVE###################################################
3269	# The ideal cases have different physics tests than the real cases. If this is
3270	# more that the total number of ideal physics experiments that we were led to
3271	# believe would exist, jump to the end of the physics loop.
3272
3273	if ( $phys_option > $Max_Ideal_Physics_Options ) then
3274	goto BOTTOM_OF_PHYSICS_LOOP
3275	endif
3276
3277	set filetag=$filetag_ideal
3278
3279	foreach compopt ( $COMPOPTS )
3280	#DAVE###################################################
3281	echo doing compopt = $compopt
3282	echo filetag = $filetag
3283	banner 25
3284	#set ans = "$<"
3285	#DAVE###################################################
3286
3287
3288	# We sometimes are interested in bypassing the OpenMP option.
3289
3290	if ( $compopt == $COMPOPTS[2] ) then
3291	if ( $ZAP_OPENMP == TRUE ) then
3292	goto BYPASS_COMP_LOOP_IDEAL
3293	endif
3294	endif
3295
3296	pushd test/$core
3297
3298	if ( ! -e namelist.input.template ) cp namelist.input namelist.input.template
3299
3300	# Create the correct namelist.input file.
3301
3302	cp ${CUR_DIR}/dom_ideal dom_ideal
3303	if ( $core == em_quarter_ss ) then
3304	cp ${CUR_DIR}/phys_quarter_ss_${phys_option}a phys_tke
3305	cp ${CUR_DIR}/phys_quarter_ss_${phys_option}b phys_mp
3306	cp ${CUR_DIR}/phys_quarter_ss_${phys_option}c phys_nh
3307	cp ${CUR_DIR}/phys_quarter_ss_${phys_option}d phys_nest
3308	cp ${CUR_DIR}/phys_quarter_ss_${phys_option}e phys_bc
3309	cp ${CUR_DIR}/phys_quarter_ss_${phys_option}f phys_sfclay
3310	else if ( $core == em_b_wave ) then
3311	cp ${CUR_DIR}/phys_b_wave_${phys_option}a phys_tke
3312	cp ${CUR_DIR}/phys_b_wave_${phys_option}b phys_mp
3313	cp ${CUR_DIR}/phys_b_wave_${phys_option}c phys_nh
3314	cp ${CUR_DIR}/phys_b_wave_${phys_option}d phys_nest
3315	endif
3316
3317	cp ${CUR_DIR}/io_format io_format
3318	if ( $NESTED == TRUE ) then
3319	if ( $core == em_quarter_ss ) then
3320	sed -e 's/ run_days = [0-9][0-9]*/ run_days = 00/g' \
3321	-e 's/ run_minutes = [0-9][0-9]*/ run_minutes = 1/g' \
3322	-e 's/ run_seconds = [0-9][0-9]*/ run_seconds = 0/g' \
3323	-e 's/ history_interval = [0-9][0-9]/ history_interval = 1/g' \
3324	-e 's/ frames_per_outfile = [0-9][0-9]/ frames_per_outfile = 100/g' \
3325	-e '/^ diff_opt/d' -e '/^ km_opt/d' -e '/^ damp_opt/d' -e '/^ rk_ord/r ./phys_tke' \
3326	-e '/^ io_form_history /,/^ io_form_boundary/d' -e '/^ restart_interval/r ./io_format' \
3327	-e '/^ mp_physics/d' -e '/^ &physics/r ./phys_mp' \
3328	-e '/^ sf_sfclay_physics/d' -e '/^ radt/r ./phys_sfclay' \
3329	-e '/^ moist_adv_opt/,/^ non_hydrostatic/d' -e '/^ v_sca_adv_order/r ./phys_nh' \
3330	-e '/^ periodic_x /,/^ open_ye/d' \
3331	-e '/^ &bdy_control/r ./phys_bc' \
3332	-e '/^ max_dom/d' -e '/^ time_step_fract_den/r ./dom_ideal' \
3333	./namelist.input.template >! namelist.input
3334	else if ( $core == em_b_wave ) then
3335	sed -e 's/ run_days = [0-9][0-9]*/ run_days = 00/g' \
3336	-e 's/ run_minutes = [0-9][0-9]*/ run_minutes = 20/g' \
3337	-e 's/ history_interval = [0-9][0-9]/ history_interval = 20/g' \
3338	-e 's/ frames_per_outfile = [0-9][0-9]/ frames_per_outfile = 100/g' \
3339	-e '/^ diff_opt/d' -e '/^ km_opt/d' -e '/^ damp_opt/d' -e '/^ rk_ord/r ./phys_tke' \
3340	-e '/^ io_form_history /,/^ io_form_boundary/d' -e '/^ restart_interval/r ./io_format' \
3341	-e '/^ mp_physics/d' -e '/^ &physics/r ./phys_mp' \
3342	-e '/^ non_hydrostatic/d' -e '/^ v_sca_adv_order/r ./phys_nh' \
3343	-e '/^ max_dom/d' -e '/^ time_step_fract_den/r ./dom_ideal' \
3344	./namelist.input.template >! namelist.input
3345	endif
3346	else if ( $NESTED != TRUE ) then
3347	if ( $core == em_quarter_ss ) then
3348	sed -e 's/ run_days = [0-9][0-9]*/ run_days = 00/g' \
3349	-e 's/ run_minutes = [0-9][0-9]*/ run_minutes = 2/g' \
3350	-e 's/ history_interval = [0-9][0-9]/ history_interval = 2/g' \
3351	-e 's/ frames_per_outfile = [0-9][0-9]/ frames_per_outfile = 100/g' \
3352	-e '/^ diff_opt/d' -e '/^ km_opt/d' -e '/^ damp_opt/d' -e '/^ rk_ord/r ./phys_tke' \
3353	-e '/^ io_form_history /,/^ io_form_boundary/d' -e '/^ restart_interval/r ./io_format' \
3354	-e '/^ mp_physics/d' -e '/^ &physics/r ./phys_mp' \
3355	-e '/^ sf_sfclay_physics/d' -e '/^ radt/r ./phys_sfclay' \
3356	-e '/^ moist_adv_opt/,/^ non_hydrostatic/d' -e '/^ v_sca_adv_order/r ./phys_nh' \
3357	-e '/^ periodic_x/d' -e '/^ open_xs/d' -e '/^ open_xe/d' \
3358	-e '/^ periodic_y/d' -e '/^ open_ys/d' -e '/^ open_ye/d' \
3359	-e '/^ &bdy_control/r ./phys_bc' \
3360	-e '/^ max_dom/d' -e '/^ time_step_fract_den/r ./dom_ideal' \
3361	./namelist.input.template >! namelist.input
3362	else if ( $core == em_b_wave ) then
3363	sed -e 's/ run_days = [0-9][0-9]*/ run_days = 00/g' \
3364	-e 's/ run_minutes = [0-9][0-9]*/ run_minutes = 100/g' \
3365	-e 's/ history_interval = [0-9][0-9]/ history_interval = 100/g' \
3366	-e 's/ frames_per_outfile = [0-9][0-9]/ frames_per_outfile = 100/g' \
3367	-e '/^ diff_opt/d' -e '/^ km_opt/d' -e '/^ damp_opt/d' -e '/^ rk_ord/r ./phys_tke' \
3368	-e '/^ io_form_history /,/^ io_form_boundary/d' -e '/^ restart_interval/r ./io_format' \
3369	-e '/^ mp_physics/d' -e '/^ &physics/r ./phys_mp' \
3370	-e '/^ non_hydrostatic/d' -e '/^ v_sca_adv_order/r ./phys_nh' \
3371	-e '/^ max_dom/d' -e '/^ time_step_fract_den/r ./dom_ideal' \
3372	./namelist.input.template >! namelist.input
3373	endif
3374	endif
3375
3376	# WRF output quilt servers are only tested for MPI configuration.
3377	# Currently, only one WRF output quilt server is used.
3378
3379	if ( $QUILT == TRUE ) then
3380	if ( $compopt == $COMPOPTS[3] ) then
3381	# For now, test only one group of one output quilt servers.
3382	sed -e 's/ nio_tasks_per_group = [0-9][0-9]*/ nio_tasks_per_group = 1/g' \
3383	-e 's/ nio_groups = [0-9][0-9]*/ nio_groups = 1/g' \
3384	namelist.input >! namelist.input.temp
3385	mv -f namelist.input.temp namelist.input
3386	echo "Building namelist.input.$core.${phys_option}.$compopt with one I/O quilt server enabled."
3387	echo "NOTE one I/O quilt server enabled for $core physics $phys_option parallel $compopt..." >>! ${DEF_DIR}/wrftest.output
3388	endif
3389	endif
3390
3391	/bin/cp namelist.input $TMPDIR/namelist.input.$core.${phys_option}.$compopt
3392	#DAVE###################################################
3393	echo built namelist
3394	ls -ls namelist.input
3395	banner 26
3396	#set ans = "$<"
3397	#DAVE###################################################
3398
3399	# If this is the serial code, generate the IC and BC. The ideal.exe program is not
3400	# parallelized, so the data is generated and saved for the rest of the parallel tests.
3401
3402	if ( $compopt == $COMPOPTS[1] ) then
3403
3404	# Zap any old input data laying around.
3405
3406	rm wrfinput_d01 >& /dev/null
3407	rm wrfbdy_d01 >& /dev/null
3408
3409	../../main/ideal_${core}.exe.1 >! print.out.ideal_${core}_Parallel=${compopt}
3410	#DAVE###################################################
3411	echo ran ideal
3412	ls -ls wrfinput*
3413	banner 27
3414	#set ans = "$<"
3415	#DAVE###################################################
3416
3417	grep "SUCCESS COMPLETE" print.out.ideal_${core}_Parallel=${compopt} >& /dev/null
3418	set success = $status
3419
3420	# Did making the IC BC files work?
3421
3422	if ( ( -e wrfinput_d01 ) && ( $success == 0 ) ) then
3423	echo "SUMMARY generate IC/BC for $core physics $phys_option parallel $compopt $esmf_lib_str PASS" >>! ${DEF_DIR}/wrftest.output
3424	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3425	else
3426	echo "SUMMARY generate IC/BC for $core physics $phys_option parallel $compopt $esmf_lib_str FAIL" >>! ${DEF_DIR}/wrftest.output
3427	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3428	$MAIL -s "WRF FAIL making IC/BC $ARCH[1] ${WHERE_AM_I} " $FAIL_MAIL < ${DEF_DIR}/wrftest.output
3429	if ( $KEEP_ON_RUNNING == FALSE ) exit ( 7 )
3430	endif
3431	endif
3432
3433	# Run the forecast for this core and parallel option
3434
3435	rm $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$compopt >& /dev/null
3436
3437	if ( $compopt == $COMPOPTS[1] ) then
3438	setenv OMP_NUM_THREADS 1
3439	if ( $NESTED == TRUE ) then
3440	$SERIALRUNCOMMAND ../../main/wrf_${core}.exe.$compopt >! print.out.wrf_${core}_Parallel=${compopt}
3441	else if ( $NESTED != TRUE ) then
3442	../../main/wrf_${core}.exe.$compopt >! print.out.wrf_${core}_Parallel=${compopt}
3443	endif
3444	else if ( $compopt == $COMPOPTS[2] ) then
3445	setenv OMP_NUM_THREADS $OPENMP
3446	if ( $NESTED == TRUE ) then
3447	$OMPRUNCOMMAND ../../main/wrf_${core}.exe.$compopt >! print.out.wrf_${core}_Parallel=${compopt}
3448	else if ( $NESTED != TRUE ) then
3449	../../main/wrf_${core}.exe.$compopt >! print.out.wrf_${core}_Parallel=${compopt}
3450	endif
3451	else if ( $compopt == $COMPOPTS[3] ) then
3452	setenv OMP_NUM_THREADS 1
3453	$MPIRUNCOMMAND ../../main/wrf_${core}.exe.$compopt $MPIRUNCOMMANDPOST
3454	mv rsl.error.0000 print.out.wrf_${core}_Parallel=${compopt}
3455	endif
3456	#DAVE###################################################
3457	echo ran ideal fcst
3458	banner 28
3459	#set ans = "$<"
3460	#DAVE###################################################
3461
3462	grep "SUCCESS COMPLETE" print.out.wrf_${core}_Parallel=${compopt}
3463	set success = $status
3464
3465	# Did making the forecast work, by that, we mean "is there an output file created?"
3466
3467	if ( ( -e wrfout_d01_${filetag} ) && ( $success == 0 ) ) then
3468	if ( $IO_FORM_NAME[$IO_FORM] == io_netcdf ) then
3469	ncdump -h wrfout_d01_${filetag} \| grep Time \| grep UNLIMITED \| grep currently \| grep -q 2
3470	set ok = $status
3471	set found_nans = 1
3472	if ( `uname` == AIX ) then
3473	ncdump wrfout_d01_${filetag} \| grep NaN >& /dev/null
3474	set found_nans = $status
3475	else if ( `uname` == OSF1 ) then
3476	ncdump wrfout_d01_${filetag} \| grep nan >& /dev/null
3477	# set found_nans = $status
3478	else if ( `uname` == Linux ) then
3479	ncdump wrfout_d01_${filetag} \| grep nan >& /dev/null
3480	set found_nans = $status
3481	endif
3482	if ( $found_nans == 0 ) then
3483	echo found nans
3484	set ok = 1
3485	endif
3486
3487	else if ( $IO_FORM_NAME[$IO_FORM] == io_grib1 ) then
3488	# set joe_times = `../../external/io_grib1/wgrib.exe -s -4yr wrfout_d01_${filetag} \| grep -v ":anl:" \| wc -l`
3489	# if ( $joe_times >= 100 ) then
3490	set joe_times = `../../external/io_grib1/wgrib.exe -s -4yr wrfout_d01_${filetag} \| grep "UGRD:10 m" \| wc -l`
3491	if ( $joe_times == 2 ) then
3492	set ok = 0
3493	else
3494	set ok = 1
3495	endif
3496	endif
3497	if ( $ok == 0 ) then
3498	echo "SUMMARY generate FCST for $core physics $phys_option parallel $compopt $esmf_lib_str PASS" >>! ${DEF_DIR}/wrftest.output
3499	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3500	else
3501	echo "SUMMARY generate FCST for $core physics $phys_option parallel $compopt $esmf_lib_str FAIL" >>! ${DEF_DIR}/wrftest.output
3502	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3503	$MAIL -s "WRF FAIL FCST $ARCH[1] ${WHERE_AM_I} " $FAIL_MAIL < ${DEF_DIR}/wrftest.output
3504	if ( $KEEP_ON_RUNNING == FALSE ) exit ( 8 )
3505	endif
3506	else
3507	echo "SUMMARY generate FCST for $core physics $phys_option parallel $compopt $esmf_lib_str FAIL" >>! ${DEF_DIR}/wrftest.output
3508	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3509	$MAIL -s "WRF FAIL FCST $ARCH[1] ${WHERE_AM_I} " $FAIL_MAIL < ${DEF_DIR}/wrftest.output
3510	if ( $KEEP_ON_RUNNING == FALSE ) exit ( 9 )
3511	endif
3512
3513	# We have to save this output file for our biggy comparison after all of the
3514	# parallel options have been considered.
3515
3516	mv wrfout_d01_${filetag} $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$compopt
3517
3518	# To save space, we move the executables after we are finished with them.
3519
3520	if ( $phys_option == $Max_Ideal_Physics_Options ) then
3521	mv ../../main/wrf_${core}.exe.$compopt $TMPDIR/wrf_${core}.exe.$compopt
3522	endif
3523	#DAVE###################################################
3524	echo fcst was a success
3525	ls -ls $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$compopt
3526	if ( $IO_FORM_NAME[$IO_FORM] == io_netcdf ) then
3527	ncdump -v Times $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$compopt \| tail -20
3528	endif
3529	banner 29
3530	#set ans = "$<"
3531	#DAVE###################################################
3532
3533	popd
3534
3535	BYPASS_COMP_LOOP_IDEAL:
3536
3537	end
3538
3539	endif
3540
3541	# OK, once more, we gotta check if this is a BIT4BIT run. If so then there
3542	# are a number of comparisons to do. If this is a an OPTIMIZED run, then the
3543	# comparisons will fail the bit-wise comparisons.
3544
3545	if ( $REG_TYPE == BIT4BIT) then
3546
3547	if ( $core == nmm_real ) then
3548
3549	pushd ${DEF_DIR}/regression_test/WRFV3/test/$core
3550	set DIFFWRF = ${DEF_DIR}/regression_test/WRFV3/external/$IO_FORM_NAME[$IO_FORM]/diffwrf
3551
3552	if ( ( -e $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[3]_1p ) && \
3553	( -e $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[3]_${Num_Procs}p ) ) then
3554	set foo1 = ( ` \ls -ls $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[3]_1p `)
3555	set foo2 = ( ` \ls -ls $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[3]_${Num_Procs}p `)
3556	set size1 = $foo1[6]
3557	set size2 = $foo2[6]
3558	if ( $size1 == $size2 ) then
3559	set RIGHT_SIZE = TRUE
3560	else
3561	set RIGHT_SIZE = FALSE
3562	endif
3563	else
3564	set RIGHT_SIZE = FALSE
3565	endif
3566
3567	# 1p vs Num_Procs MPI
3568
3569	rm fort.88 fort.98 >& /dev/null
3570	if ( ( -e $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[3]_1p ) && \
3571	( -e $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[3]_${Num_Procs}p ) && \
3572	( $RIGHT_SIZE == TRUE ) ) then
3573	$DIFFWRF $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[3]_1p \
3574	$TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[3]_${Num_Procs}p >& /dev/null
3575	else
3576	touch fort.88 fort.98
3577	endif
3578	if ( ! -e fort.88 ) then
3579	echo "SUMMARY 1 vs $Num_Procs MPI for $core physics $phys_option $esmf_lib_str PASS" >>! ${DEF_DIR}/wrftest.output
3580	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3581	else
3582	echo "SUMMARY 1 vs $Num_Procs MPI for $core physics $phys_option $esmf_lib_str FAIL" >>! ${DEF_DIR}/wrftest.output
3583	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3584	endif
3585
3586	popd
3587
3588	else if ( ${#COMPOPTS} != 1 ) then
3589
3590	# If there is only a single parallel option, then we are just trying to
3591	# build the serial code. That implies no comparisons are needed.
3592
3593	# All of the forecasts for this set of physics and core have been
3594	# generated. We now compare the WRF model output files to see
3595	# if they are S^2D^2.
3596
3597	pushd ${DEF_DIR}/regression_test/WRFV3/test/$core
3598	set DIFFWRF = ${DEF_DIR}/regression_test/WRFV3/external/$IO_FORM_NAME[$IO_FORM]/diffwrf
3599
3600	# Are we skipping the OpenMP runs?
3601
3602	if ( $ZAP_OPENMP == TRUE ) then
3603	goto BYPASS_OPENMP_SUMMARY1
3604	endif
3605
3606	# Are the files the same size? If not, then only the initial times
3607	# will be compared. That means, on a failure to run a forecast, the
3608	# diffwrf will give a pass. We need to root out this evil.
3609
3610	if ( ( -e $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[1] ) && \
3611	( -e $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[2] ) ) then
3612	set foo1 = ( ` \ls -ls $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[1] `)
3613	set foo2 = ( ` \ls -ls $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[2] `)
3614	set size1 = $foo1[6]
3615	set size2 = $foo2[6]
3616	if ( $size1 == $size2 ) then
3617	set RIGHT_SIZE_OMP = TRUE
3618	else
3619	set RIGHT_SIZE_OMP = FALSE
3620	endif
3621	else
3622	set RIGHT_SIZE_OMP = FALSE
3623	endif
3624
3625	BYPASS_OPENMP_SUMMARY1:
3626
3627	if ( ( -e $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[1] ) && \
3628	( -e $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[3] ) ) then
3629	set foo1 = ( ` \ls -ls $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[1] `)
3630	set foo3 = ( ` \ls -ls $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[3] `)
3631	set size1 = $foo1[6]
3632	set size3 = $foo3[6]
3633	if ( $size1 == $size3 ) then
3634	set RIGHT_SIZE_MPI = TRUE
3635	else
3636	set RIGHT_SIZE_MPI = FALSE
3637	endif
3638	else
3639	set RIGHT_SIZE_MPI = FALSE
3640	endif
3641
3642	! We just check to see if the files have two times worth of data in them.
3643	! We might be able to get rid of this test later. Dec 2009.
3644
3645	set times1 = ( ` ncdump -h $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[1] \| grep Time \| grep UNLIMITED \| grep currently \| cut -d"(" -f 2 \| cut -d" " -f1 `)
3646	set times3 = ( ` ncdump -h $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[3] \| grep Time \| grep UNLIMITED \| grep currently \| cut -d"(" -f 2 \| cut -d" " -f1 `)
3647	if ( ( $RIGHT_SIZE_MPI != TRUE ) && ( $times1 == 2 ) && ( $times3 == 2 ) ) then
3648	echo "--- RIGHT_SIZE_MPI false ---" >>! ${DEF_DIR}/wrftest.output
3649	set RIGHT_SIZE_MPI = TRUE
3650	endif
3651
3652	# Are we skipping the OpenMP runs?
3653
3654	if ( $ZAP_OPENMP == TRUE ) then
3655	goto BYPASS_OPENMP_SUMMARY2
3656	endif
3657
3658	# Serial vs OpenMP
3659
3660	rm fort.88 fort.98 >& /dev/null
3661	if ( ( -e $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[1] ) && \
3662	( -e $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[2] ) && \
3663	( $RIGHT_SIZE_OMP == TRUE ) ) then
3664	$DIFFWRF $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[1] \
3665	$TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[2] >& /dev/null
3666	else
3667	touch fort.88 fort.98
3668	endif
3669	if ( ! -e fort.88 ) then
3670	echo "SUMMARY serial vs OMP for $core physics $phys_option $esmf_lib_str PASS" >>! ${DEF_DIR}/wrftest.output
3671	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3672	else
3673	echo "SUMMARY serial vs OMP for $core physics $phys_option $esmf_lib_str FAIL" >>! ${DEF_DIR}/wrftest.output
3674	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3675	endif
3676
3677	BYPASS_OPENMP_SUMMARY2:
3678
3679	# Serial vs MPI
3680
3681	rm fort.88 fort.98 >& /dev/null
3682	if ( ( -e $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[1] ) && \
3683	( -e $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[3] ) && \
3684	( $RIGHT_SIZE_MPI == TRUE ) ) then
3685	$DIFFWRF $TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[1] \
3686	$TMPDIR/wrfout_d01_${filetag}.${core}.${phys_option}.$COMPOPTS[3] >& /dev/null
3687	else
3688	touch fort.88 fort.98
3689	endif
3690	if ( ! -e fort.88 ) then
3691	echo "SUMMARY serial vs MPI for $core physics $phys_option $esmf_lib_str PASS" >>! ${DEF_DIR}/wrftest.output
3692	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3693	else
3694	echo "SUMMARY serial vs MPI for $core physics $phys_option $esmf_lib_str FAIL" >>! ${DEF_DIR}/wrftest.output
3695	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3696	endif
3697
3698	popd
3699
3700	endif
3701
3702	# Generate and archive baseline or compare against baseline
3703
3704	if ( $core != nmm_real ) then
3705	if ( $GENERATE_BASELINE != FALSE ) then
3706	if ( ! -d $GENERATE_BASELINE ) then
3707	echo "ERROR: Baseline directory ${GENERATE_BASELINE} does not exist" >>! \
3708	${DEF_DIR}/wrftest.output
3709	exit ( 10 )
3710	else
3711	# Archive serial output file to baseline
3712	pushd ${DEF_DIR}/regression_test/WRFV3/test/$core
3713	set basefilenm = wrfout_d01_${filetag}.${core}.${phys_option}
3714	set basefile = ${GENERATE_BASELINE}/${basefilenm}
3715	set outfile = $TMPDIR/${basefilenm}.$COMPOPTS[1]
3716	if ( -e $outfile ) then
3717	cp $outfile $basefile \|\| \
3718	( echo "ERROR: cannot copy ${outfile} to ${basefile}" >>! \
3719	${DEF_DIR}/wrftest.output; exit 10 )
3720	else
3721	echo "ERROR: Cannot archive baseline, file $outfile does not exist" >>! \
3722	${DEF_DIR}/wrftest.output
3723	echo "SUMMARY baseline archived in ${GENERATE_BASELINE} for $core physics $phys_option FAIL" >>! \
3724	${DEF_DIR}/wrftest.output
3725	echo "-------------------------------------------------------------" >> \
3726	${DEF_DIR}/wrftest.output
3727	exit ( 10 )
3728	endif
3729	echo "SUMMARY baseline archived in ${GENERATE_BASELINE} for $core physics $phys_option PASS" >>! \
3730	${DEF_DIR}/wrftest.output
3731	echo "-------------------------------------------------------------" >> \
3732	${DEF_DIR}/wrftest.output
3733	popd
3734	endif
3735	endif
3736	if ( $COMPARE_BASELINE != FALSE ) then
3737	if ( ! -d $COMPARE_BASELINE ) then
3738	echo "${0}: ERROR:: Baseline directory ${COMPARE_BASELINE} does not exist" >>! \
3739	${DEF_DIR}/wrftest.output
3740	exit ( 10 )
3741	else
3742	# Compare against baseline output file
3743	set basefilenm = wrfout_d01_${filetag}.${core}.${phys_option}
3744	set basefile = ${COMPARE_BASELINE}/${basefilenm}
3745	set DIFFWRF = ${DEF_DIR}/regression_test/WRFV3/external/$IO_FORM_NAME[$IO_FORM]/diffwrf
3746	set testdir = ${DEF_DIR}/regression_test/WRFV3/test/$core
3747	pushd ${testdir}
3748	foreach compopt ( $COMPOPTS )
3749	set cmpfile = $TMPDIR/${basefilenm}.$compopt
3750	rm fort.88 fort.98 >& /dev/null
3751	if ( ( -e ${basefile} ) && ( -e ${cmpfile} ) ) then
3752	# Are the files the same size? If not, then only the initial times
3753	# will be compared. That means, on a failure to run a forecast, the
3754	# diffwrf will give a pass. We need to root out this evil.
3755	set foob = ( ` \ls -ls ${basefile} `)
3756	set fooc = ( ` \ls -ls ${cmpfile} `)
3757	set sizeb = $foob[6]
3758	set sizec = $fooc[6]
3759	if ( $sizeb == $sizec ) then
3760	$DIFFWRF ${basefile} ${cmpfile} >& /dev/null
3761	if ( -e fort.88 ) then
3762	echo "FAIL: Baseline comparison, file ${cmpfile} did not match ${basefile} according to diffwrf" >>! \
3763	${DEF_DIR}/wrftest.output
3764	endif
3765	else
3766	touch fort.88 fort.98
3767	echo "FAIL: Baseline comparison, files ${cmpfile} and ${basefile} have different sizes" >>! \
3768	${DEF_DIR}/wrftest.output
3769	endif
3770	else
3771	echo "FAIL: Baseline comparison, either ${cmpfile} or ${basefile} does not exist" >>! \
3772	${DEF_DIR}/wrftest.output
3773	touch fort.88 fort.98
3774	endif
3775	if ( ! -e fort.88 ) then
3776	echo "SUMMARY compare vs baseline ${COMPARE_BASELINE} for $core physics $phys_option compopt $compopt $esmf_lib_str PASS" >>! \
3777	${DEF_DIR}/wrftest.output
3778	echo "-------------------------------------------------------------" >> \
3779	${DEF_DIR}/wrftest.output
3780	else
3781	echo "SUMMARY compare vs baseline ${COMPARE_BASELINE} for $core physics $phys_option compopt $compopt $esmf_lib_str FAIL" >>! \
3782	${DEF_DIR}/wrftest.output
3783	echo "-------------------------------------------------------------" >> \
3784	${DEF_DIR}/wrftest.output
3785	endif
3786	end
3787	popd
3788	endif
3789	endif
3790	else if ( $core == nmm_real ) then
3791	if ( $GENERATE_BASELINE != FALSE ) then
3792	if ( ! -d $GENERATE_BASELINE ) then
3793	echo "ERROR: Baseline directory ${GENERATE_BASELINE} does not exist" >>! \
3794	${DEF_DIR}/wrftest.output
3795	exit ( 10 )
3796	else
3797	# Archive serial output file to baseline
3798	pushd ${DEF_DIR}/regression_test/WRFV3/test/$core
3799	set basefilenm = wrfout_d01_${filetag}.${core}.${phys_option}
3800	set basefile = ${GENERATE_BASELINE}/${basefilenm}
3801	set outfile = $TMPDIR/${basefilenm}.$COMPOPTS[3]_1p
3802	if ( -e $outfile ) then
3803	cp $outfile $basefile \|\| \
3804	( echo "ERROR: cannot copy ${outfile} to ${basefile}" >>! \
3805	${DEF_DIR}/wrftest.output; exit 10 )
3806	else
3807	echo "ERROR: Cannot archive baseline, file $outfile does not exist" >>! \
3808	${DEF_DIR}/wrftest.output
3809	echo "SUMMARY baseline archived in ${GENERATE_BASELINE} for $core physics $phys_option FAIL" >>! \
3810	${DEF_DIR}/wrftest.output
3811	echo "-------------------------------------------------------------" >> \
3812	${DEF_DIR}/wrftest.output
3813	exit ( 10 )
3814	endif
3815	echo "SUMMARY baseline archived in ${GENERATE_BASELINE} for $core physics $phys_option PASS" >>! \
3816	${DEF_DIR}/wrftest.output
3817	echo "-------------------------------------------------------------" >> \
3818	${DEF_DIR}/wrftest.output
3819	popd
3820	endif
3821	endif
3822	if ( $COMPARE_BASELINE != FALSE ) then
3823	if ( ! -d $COMPARE_BASELINE ) then
3824	echo "${0}: ERROR:: Baseline directory ${COMPARE_BASELINE} does not exist" >>! \
3825	${DEF_DIR}/wrftest.output
3826	exit ( 10 )
3827	else
3828	# Compare against baseline output file
3829	set basefilenm = wrfout_d01_${filetag}.${core}.${phys_option}
3830	set basefile = ${COMPARE_BASELINE}/${basefilenm}
3831	set DIFFWRF = ${DEF_DIR}/regression_test/WRFV3/external/$IO_FORM_NAME[$IO_FORM]/diffwrf
3832	set testdir = ${DEF_DIR}/regression_test/WRFV3/test/$core
3833	pushd ${testdir}
3834	set compopt = $COMPOPTS[3]
3835	foreach proc ( 1p 4p )
3836	set cmpfile = $TMPDIR/${basefilenm}.${compopt}_${proc}
3837	rm fort.88 fort.98 >& /dev/null
3838	if ( ( -e ${basefile} ) && ( -e ${cmpfile} ) ) then
3839	# Are the files the same size? If not, then only the initial times
3840	# will be compared. That means, on a failure to run a forecast, the
3841	# diffwrf will give a pass. We need to root out this evil.
3842	set foob = ( ` \ls -ls ${basefile} `)
3843	set fooc = ( ` \ls -ls ${cmpfile} `)
3844	set sizeb = $foob[6]
3845	set sizec = $fooc[6]
3846	if ( $sizeb == $sizec ) then
3847	$DIFFWRF ${basefile} ${cmpfile} >& /dev/null
3848	if ( -e fort.88 ) then
3849	echo "FAIL: Baseline comparison, file ${cmpfile} did not match ${basefile} according to diffwrf" >>! \
3850	${DEF_DIR}/wrftest.output
3851	endif
3852	else
3853	touch fort.88 fort.98
3854	echo "FAIL: Baseline comparison, files ${cmpfile} and ${basefile} have different sizes" >>! \
3855	${DEF_DIR}/wrftest.output
3856	endif
3857	else
3858	echo "FAIL: Baseline comparison, either ${cmpfile} or ${basefile} does not exist" >>! \
3859	${DEF_DIR}/wrftest.output
3860	touch fort.88 fort.98
3861	endif
3862	if ( ! -e fort.88 ) then
3863	echo "SUMMARY compare vs baseline ${COMPARE_BASELINE} for $core physics $phys_option compopt $compopt $esmf_lib_str PASS" >>! \
3864	${DEF_DIR}/wrftest.output
3865	echo "-------------------------------------------------------------" >> \
3866	${DEF_DIR}/wrftest.output
3867	else
3868	echo "SUMMARY compare vs baseline ${COMPARE_BASELINE} for $core physics $phys_option compopt $compopt $esmf_lib_str FAIL" >>! \
3869	${DEF_DIR}/wrftest.output
3870	echo "-------------------------------------------------------------" >> \
3871	${DEF_DIR}/wrftest.output
3872	endif
3873	end
3874	popd
3875	endif
3876	endif
3877	goto ALL_SHE_WROTE_FOR_NMM
3878	endif
3879	# End of generate and archive baseline or compare against baseline
3880
3881	endif
3882
3883	BOTTOM_OF_PHYSICS_LOOP:
3884
3885	end
3886
3887	ALL_SHE_WROTE_FOR_NMM:
3888
3889	echo "-------------------------------------------------------------" >> ${DEF_DIR}/wrftest.output
3890
3891	if ( $clrm ) then
3892	popd
3893	endif
3894
3895	end
3896
3897
3898	# How long did this take.
3899
3900	set end = ( `date` )
3901	echo "Start WRF Regression: $start " >> ${DEF_DIR}/wrftest.output
3902	echo "End WRF Regression: $end " >> ${DEF_DIR}/wrftest.output
3903
3904	# We have done all of the tests, and placed the PASS FAIL labels in the
3905	# output file. If there are any FAIL messages, we are in trouble.
3906
3907	grep FAIL ${DEF_DIR}/wrftest.output
3908	set ok = $status
3909
3910	# Send email of the status.
3911
3912	if ( $ok == 0 ) then
3913	$MAIL -s "REGRESSION FAILURE $ARCH[1] ${WHERE_AM_I} " $FAIL_MAIL < ${DEF_DIR}/wrftest.output
3914	else
3915	$MAIL -s "REGRESSION SUCCESS $ARCH[1] ${WHERE_AM_I} " $GOOD_MAIL < ${DEF_DIR}/wrftest.output
3916	endif
3917
3918	# Clean left up detritus
3919
3920	cd $CUR_DIR
3921
3922	rm -rf damp_*eal >& /dev/null
3923	rm -rf dom_*eal >& /dev/null
3924	rm -rf phys_real_* >& /dev/null
3925	rm -rf nest_real_* >& /dev/null
3926	rm -rf phys_quarter_* >& /dev/null
3927	rm -rf phys_b_wave_* >& /dev/null
3928	rm -rf version_info >& /dev/null
3929	rm -rf machfile >& /dev/null
3930	rm -rf fdda_real* >& /dev/null
3931	rm -rf time_real_* >& /dev/null
3932	rm -rf dyn_real_* >& /dev/null
3933	rm -rf damp_* >& /dev/null
3934	rm -rf io_format >& /dev/null

Note: See TracBrowser for help on using the repository browser.

Context Navigation

source: lmdz_wrf/WRFV3/tools/regtest.csh @ 1

Download in other formats: