Changeset 5203 for LMDZ6/branches/cirrus/libf/dyn3d_common

Timestamp:

Sep 20, 2024, 1:10:18 PM (3 months ago)

Author:

Laurent Fairhead

Message:

Merge with trunk revision 5202 before reintegration to trunk

Location:

LMDZ6/branches/cirrus

Files:

• . (modified) (1 prop)
• libf/dyn3d_common/infotrac.F90 (modified) (18 diffs)
• libf/dyn3d_common/iso_verif_dyn.F (modified) (2 diffs)

LMDZ6/branches/cirrus/libf/dyn3d_common/infotrac.F90

@@ -7 +7 @@
         delPhase, niso, getKey, isot_type, processIsotopes,  isotope, maxTableWidth, iqIsoPha, nphas, ixIso, isoPhas, &
         addPhase, iH2O, addKey, isoSelect, testTracersFiles, isoKeys, indexUpdate,  iqWIsoPha, nbIso, ntiso, isoName, isoCheck
+   USE readTracFiles_mod, ONLY: new2oldH2O, newHNO3, oldHNO3
    IMPLICIT NONE
 
@@ -16 +17 @@
    PUBLIC :: nqtot,   nbtr,   nqo,   nqCO2,   nqtottr      !--- Main dimensions
    PUBLIC :: conv_flg, pbl_flg                             !--- Convection & boundary layer activation keys
+   PUBLIC :: new2oldH2O, newHNO3, oldHNO3                  !--- For backwards compatibility in dynetat0
+   PUBLIC :: addPhase, delPhase                            !--- Add/remove the phase from the name of a tracer
 
    !=== FOR ISOTOPES: General
@@ -21 +24 @@
    PUBLIC :: isoSelect, ixIso                              !--- Isotopes family selection tool + selected family index
    !=== FOR ISOTOPES: Specific to water
-   PUBLIC :: iH2O                                          !--- H2O isotopes class index
+   PUBLIC :: iH2O                                          !--- Value of "ixIso" for "H2O" isotopes class
    PUBLIC :: min_qParent, min_qMass, min_ratio             !--- Min. values for various isotopic quantities
    !=== FOR ISOTOPES: Depending on the selected isotopes family
-   PUBLIC :: isotope, isoKeys                              !--- Selected isotopes database + associated keys (cf. getKey)
-   PUBLIC :: isoName, isoZone, isoPhas                     !--- Isotopes and tagging zones names, phases
-   PUBLIC :: niso,    nzone,   nphas,   ntiso              !---  " " numbers + isotopes & tagging tracers number
-   PUBLIC :: itZonIso                                      !--- idx "it" (in "isoName(1:niso)") = function(tagging idx, isotope idx)
-   PUBLIC :: iqIsoPha                                      !--- idx "iq" (in "qx") = function(isotope idx, phase idx) + aliases
+   PUBLIC :: isotope                                       !--- Selected isotopes database (argument of getKey)
+   PUBLIC :: isoKeys, isoName, isoZone, isoPhas            !--- Isotopes keys & names, tagging zones names, phases
+   PUBLIC ::    niso,   ntiso,   nzone,   nphas            !--- Number of   "   "
+   PUBLIC :: itZonIso                                      !--- index "it" in "isoName(1:niso)" = f(tagging idx, isotope idx)
+   PUBLIC :: iqIsoPha                                      !--- index "iq" in "qx"              = f(isotope idx,   phase idx)
    PUBLIC :: isoCheck                                      !--- Run isotopes checking routines
    !=== FOR BOTH TRACERS AND ISOTOPES
@@ -36 +39 @@
 !  |--------------------+-----------------------+-----------------+---------------+----------------------------|
 !  | water in different |    water tagging      |  water isotopes | other tracers | additional tracers moments |
-!  | phases: H2O_[gls]  |      isotopes         |                 |               |  for higher order schemes  |
+!  | phases: H2O_[glsrb]|      isotopes         |                 |               |  for higher order schemes  |
 !  |--------------------+-----------------------+-----------------+---------------+----------------------------|
 !  |                    |                       |                 |               |                            |
@@ -61 +64 @@
 !  |-------------+------------------------------------------------------+-------------+------------------------+
 !  | name        | Name (short)                                         | tname       |                        |
+!  | keys        | key/val pairs accessible with "getKey" routine       | /           |                        |
 !  | gen0Name    | Name of the 1st generation ancestor                  | /           |                        |
 !  | parent      | Name of the parent                                   | /           |                        |
 !  | longName    | Long name (with adv. scheme suffix) for outputs      | ttext       |                        |
 !  | type        | Type (so far: tracer or tag)                         | /           | tracer,tag             |
-!  | phase       | Phases list ("g"as / "l"iquid / "s"olid)             | /           | [g][l][s]              |
+!  | phase       | Phases list ("g"as / "l"iquid / "s"olid              |             | [g|l|s|r|b]            |
+!  |             |              "r"(cloud) / "b"lowing)                 | /           |                        |
 !  | component   | Name(s) of the merged/cumulated section(s)           | /           | coma-separated names   |
 !  | iGeneration | Generation (>=1)                                     | /           |                        |
@@ -72 +77 @@
 !  | nqDescen    | Number of the descendants   (all generations)        | nqdesc      | 1:nqtot                |
 !  | nqChildren  | Number of childs            (1st generation only)    | nqfils      | 1:nqtot                |
-!  | keys        | key/val pairs accessible with "getKey" routine       | /           |                        |
 !  | iadv        | Advection scheme number                              | iadv        | 1,2,10-20(exc.15,19),30|
-!  | isAdvected  | advected tracers flag (.TRUE. if iadv >= 0)          | /           | nqtrue  .TRUE. values  |
-!  | isInPhysics | tracers not extracted from the main table in physics | /           | nqtottr .TRUE. values  |
+!  | isAdvected  | Advected tracers flag (.TRUE. if iadv >= 0)          | /           | nqtrue  .TRUE. values  |
+!  | isInPhysics | Tracers not extracted from the main table in physics | /           | nqtottr .TRUE. values  |
 !  | iso_iGroup  | Isotopes group index in isotopes(:)                  | /           | 1:nbIso                |
 !  | iso_iName   | Isotope  name  index in isotopes(iso_iGroup)%trac(:) | iso_indnum  | 1:niso                 |
@@ -91 +95 @@
 !  | trac   | ntiso  | Isotopes + tagging tracers list + number         | / | ntraciso       |                 |
 !  | zone   | nzone  | Geographic tagging zones   list + number         | / | ntraceurs_zone |                 |
-!  | phase  | nphas  | Phases                     list + number         |                    | [g][l][s], 1:3  |
+!  | phase  | nphas  | Phases                     list + number         |                    | [g|l|s|r|b] 1:5 |
 !  | iqIsoPha        | Index in "qx"           = f(name(1:ntiso)),phas) | iqiso              | 1:nqtot         |
 !  | itZonIso        | Index in "trac(1:ntiso)"= f(zone, name(1:niso))  | index_trac         | 1:ntiso         |
@@ -99 +103 @@
 
    !=== DIMENSIONS OF THE TRACERS TABLES AND OTHER SCALAR VARIABLES
-   INTEGER,               SAVE :: nqtot,  &                     !--- Tracers nb in dynamics (incl. higher moments + H2O)
-                                  nbtr,   &                     !--- Tracers nb in physics  (excl. higher moments + H2O)
-                                  nqo,    &                     !--- Number of water phases
+   INTEGER,               SAVE :: nqtot,   &                    !--- Tracers nb in dynamics (incl. higher moments + H2O)
+                                  nbtr,    &                    !--- Tracers nb in physics  (excl. higher moments + H2O)
+                                  nqo,     &                    !--- Number of water phases
                                   nqtottr, &                    !--- Number of tracers passed to phytrac (TO BE DELETED ?)
                                   nqCO2                         !--- Number of tracers of CO2  (ThL)
-   CHARACTER(LEN=maxlen), SAVE :: type_trac                     !--- Keyword for tracers type
+   CHARACTER(LEN=maxlen), SAVE :: type_trac                     !--- Keyword for tracers type(s)
 
    !=== VARIABLES FOR INCA
-   INTEGER,               SAVE, ALLOCATABLE :: conv_flg(:), &   !--- Convection     activation ; needed for INCA        (nbtr)
-                                                pbl_flg(:)      !--- Boundary layer activation ; needed for INCA        (nbtr)
+   INTEGER, DIMENSION(:), SAVE, ALLOCATABLE :: &
+                    conv_flg, pbl_flg                           !--- Convection / boundary layer activation (nbtr)
 
 CONTAINS
@@ -115 +119 @@
    USE control_mod, ONLY: planet_type
 #ifdef REPROBUS
-   USE CHEM_REP,    ONLY: Init_chem_rep_trac
+   USE CHEM_REP, ONLY: Init_chem_rep_trac
 #endif
    IMPLICIT NONE
@@ -160 +164 @@
    TYPE(trac_type), ALLOCATABLE, TARGET :: ttr(:)
    TYPE(trac_type), POINTER             :: t1, t(:)
-   CHARACTER(LEN=maxlen),   ALLOCATABLE :: types_trac(:)  !--- Keyword for tracers type(s), parsed version
-
+   CHARACTER(LEN=maxlen),   ALLOCATABLE :: types_trac(:)             !--- Keywords for tracers type(s), parsed version
    CHARACTER(LEN=*), PARAMETER :: modname="init_infotrac"
 !------------------------------------------------------------------------------------------------------------------------------
@@ -171 +174 @@
    descrq(10:20) = ['VL1','VLP','FH1','FH2','VLH','   ','PPM','PPS','PPP','   ','SLP']
    descrq(30)    =  'PRA'
-    
-   CALL msg('type_trac = "'//TRIM(type_trac)//'"', modname)
 
    lerr=strParse(type_trac, '|', types_trac, n=nt)
    IF (nt .GT. 1) THEN
       IF (nt .GT. 2) CALL abort_gcm(modname, 'you need to modify type_trac, this version is not supported by lmdz', 1)
-      if (nt .EQ. 2) type_trac=types_trac(2)
+      IF (nt .EQ. 2) type_trac=types_trac(2)
    ENDIF
 
+   CALL msg('type_trac = "'//TRIM(type_trac)//'"', modname)
 
    
@@ -213 +215 @@
 
 !==============================================================================================================================
-! 1) Get the numbers of: true (first order only) tracers "nqtrue", water tracers "nqo" (vapor/liquid/solid)
-!==============================================================================================================================
-   texp = type_trac                                                  !=== EXPANDED VERSION OF "type_trac", WITH "|" SEPARATOR
+! 0) DETERMINE THE TYPE OF THE INPUT TRACERS DESCRIPTION FILE AND READ IT
+!==============================================================================================================================
+   texp = type_trac                                                            !=== EXPANDED (WITH "|" SEPARATOR) "type_trac"
    IF(texp == 'inco') texp = 'co2i|inca'
    IF(texp /= 'lmdz') texp = 'lmdz|'//TRIM(texp)
-
-   !=== DETERMINE THE TYPE OF THE INPUT TRACERS DESCRIPTION FILE
    IF(testTracersFiles(modname, texp, fType, .TRUE.)) CALL abort_gcm(modname, 'problem with tracers file(s)',1)
    ttp = type_trac; IF(fType /= 1) ttp = texp
-
    IF(readTracersFiles(ttp, lRepr=type_trac=='repr')) CALL abort_gcm(modname, 'problem with tracers file(s)',1)
-   !---------------------------------------------------------------------------------------------------------------------------
-   IF(fType == 0) CALL abort_gcm(modname, 'Missing tracers file: "traceur.def", "tracer.def" or "tracer_<keyword>.def file.',1)
-   !---------------------------------------------------------------------------------------------------------------------------
-   IF(fType == 1 .AND. ANY(['inca','inco']==type_trac)) THEN         !=== FOUND OLD STYLE INCA "traceur.def"
+
+!==============================================================================================================================
+! 1) Get various numbers: "nqtrue" (first order only tracers), "nqo" (water phases), 'nbtr' (tracers passed to physics), etc.
+!==============================================================================================================================
+   !---------------------------------------------------------------------------------------------------------------------------
+   IF(fType == 0) CALL abort_gcm(modname, 'Missing "traceur.def", "tracer.def" or "tracer_<keyword>.def tracers file.',1)
+   !---------------------------------------------------------------------------------------------------------------------------
+   IF(fType == 1 .AND. ANY(['inca', 'inco'] == type_trac)) THEN      !=== FOUND OLD STYLE INCA "traceur.def"
    !---------------------------------------------------------------------------------------------------------------------------
 #ifdef INCA
@@ -264 +267 @@
    ELSE                                                              !=== OTHER CASES (OLD OR NEW FORMAT, NO INCA MODULE)
    !---------------------------------------------------------------------------------------------------------------------------
-      nqo    =        COUNT(delPhase(tracers(:)%name)     == 'H2O' &
-                               .AND. tracers(:)%component == 'lmdz') !--- Number of water phases
-      nqtrue = SIZE(tracers)                                         !--- Total number of "true" tracers
-      nbtr   = nqtrue-COUNT(delPhase(tracers(:)%gen0Name) == 'H2O' &
-                               .AND. tracers(:)%component == 'lmdz') !--- Number of tracers passed to phytrac
+   nqtrue = SIZE(tracers)                                                                               !--- "true" tracers
+   nqo    =      COUNT(tracers(:)%component == 'lmdz' .AND. delPhase(tracers(:)%name)     == 'H2O')     !--- Water phases
+   nbtr = nqtrue-COUNT(tracers(:)%component == 'lmdz' .AND. delPhase(tracers(:)%gen0Name) == 'H2O')     !--- Passed to phytrac
+   nqCO2  =      COUNT( [type_trac == 'inco', type_trac == 'co2i'] )
 #ifdef INCA
-      nqINCA = COUNT(tracers(:)%component == 'inca')
-#endif
-      lerr = getKey('hadv', hadv, ky=tracers(:)%keys)
-      lerr = getKey('vadv', vadv, ky=tracers(:)%keys)
+   nqINCA =      COUNT(tracers(:)%component == 'inca')
+#endif
+   IF(getKey('hadv', hadv, ky=tracers(:)%keys)) CALL abort_gcm(modname, 'missing key "hadv"', 1)
+   IF(getKey('vadv', vadv, ky=tracers(:)%keys)) CALL abort_gcm(modname, 'missing key "vadv"', 1)
    !---------------------------------------------------------------------------------------------------------------------------
    END IF
@@ -279 +281 @@
 
 #ifdef REPROBUS
-   !--- Transfert the number of tracers to Reprobus
    CALL Init_chem_rep_trac(nbtr, nqo, tracers(:)%name)
-
-#endif
+#endif
+
 !==============================================================================================================================
 ! 2) Calculate nqtot, number of tracers needed (greater if advection schemes 20 or 30 have been chosen).
@@ -332 +333 @@
       IF(iad == -1) CALL abort_gcm(modname, msg1, 1)
 
-      !--- SET FIELDS %longName, %iadv, %isAdvected, %isInPhysics
+      !--- SET FIELDS longName, iadv, isAdvected, isInPhysics
       t1%longName   = t1%name; IF(iad > 0) t1%longName=TRIM(t1%name)//descrq(iad)
       t1%iadv       = iad
       t1%isAdvected = iad >= 0
-      t1%isInPhysics= delPhase(t1%gen0Name) /= 'H2O' &
-                          .OR. t1%component /= 'lmdz' !=== OTHER EXCEPTIONS TO BE ADDED: CO2i, SURSATURATED WATER CLOUD...
+      t1%isInPhysics= delPhase(t1%gen0Name) /= 'H2O' .OR. t1%component /= 'lmdz' !=== MORE EXCEPTIONS ? CO2i, SURSAT CLOUD H2O
       ttr(iq)       = t1
 
@@ -347 +347 @@
       ttr(jq+1:jq+nm)             = t1
       ttr(jq+1:jq+nm)%name        = [ (TRIM(t1%name)    //'-'//TRIM(suff(im)), im=1, nm) ]
+      ttr(jq+1:jq+nm)%gen0Name    = [ (TRIM(t1%name)    //'-'//TRIM(suff(im)), im=1, nm) ]
       ttr(jq+1:jq+nm)%parent      = [ (TRIM(t1%parent)  //'-'//TRIM(suff(im)), im=1, nm) ]
       ttr(jq+1:jq+nm)%longName    = [ (TRIM(t1%longName)//'-'//TRIM(suff(im)), im=1, nm) ]
@@ -356 +357 @@
    CALL MOVE_ALLOC(FROM=ttr, TO=tracers)
 
-   !--- SET FIELDS %iqParent, %nqChildren, %iGeneration, %iqDescen, %nqDescen
+   !--- SET FIELDS iqParent, iqDescen, nqDescen, nqChildren
    IF(indexUpdate(tracers)) CALL abort_gcm(modname, 'problem with tracers indices update', 1)
 
    !=== TEST ADVECTION SCHEME
-   DO iq=1,nqtot ; t1 => tracers(iq); iad = t1%iadv
+   DO iq = 1, nqtot ; t1 => tracers(iq); iad = t1%iadv
 
       !--- ONLY TESTED VALUES FOR TRACERS FOR NOW:               iadv = 14, 10 (and 0 for non-transported tracers)
@@ -405 +406 @@
 #endif
    t => tracers
-   CALL msg('Information stored in infotrac :', modname)
-
-   IF(dispTable('isssssssssiiiiiiiii', ['iq  ', 'name', 'lNam', 'g0Nm', 'prnt', 'type', 'phas', 'comp',    &
-                'isPh', 'isAd', 'iadv', 'iGen', 'iqPr', 'nqDe', 'nqCh', 'iGrp', 'iNam', 'iZon', 'iPha'],   &
-      cat(t%name, t%longName, t%gen0Name, t%parent, t%type, t%phase, t%component, bool2str(t%isInPhysics), &
-                                                                                  bool2str(t%isAdvected)), &
+   CALL msg('Information stored in '//TRIM(modname)//': ', modname)
+   IF(dispTable('isssssssiiiiiiiii', ['iq  ', 'name', 'lNam', 'g0Nm', 'prnt', 'type', 'phas', 'comp',      &
+                              'iAdv', 'iGen', 'iqPr', 'nqDe', 'nqCh', 'iGrp', 'iNam', 'iZon', 'iPha'],     &
+      cat(t%name, t%longName, t%gen0Name, t%parent, t%type, t%phase, t%component),                         &
       cat([(iq, iq=1, nqtot)], t%iadv, t%iGeneration, t%iqParent, t%nqDescen, t%nqChildren, t%iso_iGroup,  &
                   t%iso_iName, t%iso_iZone, t%iso_iPhase), nColMax=maxTableWidth, nHead=2, sub=modname))   &

LMDZ6/branches/cirrus/libf/dyn3d_common/iso_verif_dyn.F

@@ -64 +64 @@
         function iso_verif_aberrant_nostop
      :           (x,iso,q,err_msg)
+#ifdef CPP_IOIPSL
+        USE IOIPSL, ONLY: getin
+#else
+        USE ioipsl_getincom, ONLY: getin
+#endif
         USE infotrac, ONLY: isoName, getKey
         implicit none
@@ -77 +82 @@
         parameter (qmin=1e-11)
         parameter (deltaDmax=200.0,deltaDmin=-999.9)
+        LOGICAL, SAVE :: ltnat1
+        LOGICAL, SAVE :: lFirst=.TRUE.
 
         ! output
         integer iso_verif_aberrant_nostop
 
+        IF(lFirst) THEN
+           ltnat1 = .TRUE.; CALL getin('tnateq1', ltnat1)
+           lFirst = .FALSE.
+        END IF
         iso_verif_aberrant_nostop=0
 
         ! verifier que HDO est raisonable
          if (q.gt.qmin) then
-             IF(getKey('tnat', tnat, isoName(iso))) THEN
+             IF(ltnat1) THEN
+                tnat = 1.0
+             ELSE IF(getKey('tnat', tnat, isoName(iso))) THEN
                   err_msg = 'Missing isotopic parameter "tnat"'
                   iso_verif_aberrant_nostop=1