Changeset 5109 for LMDZ6/trunk/arch

Timestamp:

Jul 24, 2024, 11:16:13 AM (4 months ago)

Author:

Sebastien Nguyen

Message:

added runoffland (bucket runoff) to outputs and automatic output for water isotopes defined in tracer.def

Location:

LMDZ6/trunk/arch

Files:

• arch-X64_JEANZAY.env (modified) (1 diff)
• arch-X64_JEANZAY.path (modified) (1 diff)

LMDZ6/trunk/arch/arch-X64_JEANZAY.env

@@ -1 @@
-module purge
-module load intel-compilers/19.0.4
- module load intel-mkl/19.0.4
-module load hdf5/1.10.5-mpi
-module load netcdf/4.7.2-mpi
-module load netcdf-fortran/4.5.2-mpi
-module load netcdf95
-module load subversion/1.9.7
-module load cmake
 
-export FC=mpiifort
-export CPP="icc -E"
-export CC=icc
+##############################################################
+# Gestion des modules
+##############################################################
 
+hostname=jean-zay4
+echo lmdz_env $hostname 0:3 ${hostname:0:3}
+
+case ${hostname:0:5} in
+
+        jean-) ARCH=X64_JEANZAY
+                module purge
+                compilo=19.0.4 # available 2013.0, 2017.2
+                module load intel-compilers/$compilo
+                #module load intel-mpi/$compilo
+                module load intel-mkl/$compilo
+                module load hdf5/1.10.5-mpi
+                module load netcdf/4.7.2-mpi
+                module load netcdf-fortran/4.5.2-mpi
+        module load netcdf95/0.3-mpi
+                module load subversion/1.9.7
+                #Pour module gcc, voir : https://trac.lmd.jussieu.fr/LMDZ/wiki/PortageJeanZay
+                #module load gcc/6.5.0
+                module load nco
+                module load cdo
+                # Imputation de la consommation sur le groupe (projet) actif par defaut,
+                #   idrproj indique le groupe (projet) actif par defaut
+                #   idrproj -d newproj   redefinit "newproj" en tant que  projet actif, 
+                #        alors $STORE, $WORK etc vont designer les espaces de "newproj")
+                groupe=`idrproj | grep active | awk '{ print $1}'`
+        groupe="nfl"
+                submit="sbatch -A ${groupe}@cpu "
+                run="srun --label -n "
+                # Espaces suivants definis par defaut en fonction du groupe actif,
+                #  par exemple : SCRATCHD=$SCRATCH is /gpfsstore/rech/$groupe/$login
+                #    * On peut aussi ne pas installer les scripts a la racine de STORE, 
+                #        mais dans STORED=$STORE/your_folder
+                STORED=$STORE
+                SCRATCHD=$SCRATCH
+                LMDZD=$WORK
+                nb_mpi_max=2000
+                nb_omp_max=20
+                #LMDZ_Init sur le $STORE du $groupe
+                LMDZ_Init=$STORE/LMDZ_Init ;;
+        *) ARCH=
+                submit=". "
+                run="mpirun -np "
+                SCRATCHD=~/TMP/SCRATCH
+                STORED=~/TMP/
+                LMDZD=~/TMP
+                nb_mpi_max=2
+                nb_omp_max=2
+                LMDZ_Init=~/LMDZ/LMDZ_Init
+esac
+
+
+echo LMDZ_Init dans lmdz_env $LMDZ_Init

LMDZ6/trunk/arch/arch-X64_JEANZAY.path

@@ -1 @@
-NETCDF_INCDIR="-I$(nf-config --includedir) -I$(nc-config --includedir)"  # nc required for xios
-# Ugly hack for orchidee <=2.0
-NETCDF_LIBDIR="-L$(nf-config --flibs | sed -e "s/-L//")"
+# $Id$
+#NETCDF_LIBDIR="-L$NETCDFFORTRAN_LIBDIR -L$NETCDF_LIBDIR -lnetcdf -lnetcdff"
+#NETCDF_INCDIR=-I$NETCDFFORTRAN_INCDIR
+NETCDF_INCDIR=""
+NETCDF_LIBDIR=""
 NETCDF_LIB="-lnetcdff -lnetcdf"
-NETCDF95_INCDIR="-I$(pwd)/../../include"
-NETCDF95_LIBDIR="-L$(pwd)/../../lib"
-NETCDF95_LIB="-lnetcdf95"
 
-# Exported
-IOIPSL_INCDIR="-I$(pwd)/../IOIPSL/inc -I$(pwd)/../IOIPSL/lib"
-IOIPSL_LIBDIR="-L$(pwd)/../IOIPSL/inc -L$(pwd)/../IOIPSL/lib"
+NETCDF95_INCDIR=-I$NETCDF95_ROOT/include/NetCDF95
+NETCDF95_LIBDIR=-L$NETCDF95_ROOT/lib
+NETCDF95_LIB=-lnetcdf95
+
+IOIPSL_INCDIR="-I$LMDGCM/../../lib -I$LMDGCM/../IOIPSL/inc"
+IOIPSL_LIBDIR="-L$LMDGCM/../../lib -L$LMDGCM/../IOIPSL/lib"
 IOIPSL_LIB="-lioipsl"
 
-# Exported
-XIOS_INCDIR="-I$(pwd)/../XIOS/inc"
-XIOS_LIBDIR="-L$(pwd)/../XIOS/lib"
+XIOS_INCDIR="-I$LMDGCM/../XIOS/inc"
+XIOS_LIBDIR="-L$LMDGCM/../XIOS/lib"
 XIOS_LIB="-lxios -lstdc++"
 
-# Exported
-ORCH_INCDIR="-I$(pwd)/../ORCHIDEE/inc -I$(pwd)/../ORCHIDEE/lib"
-ORCH_LIBDIR="-L$(pwd)/../ORCHIDEE/inc -L$(pwd)/../ORCHIDEE/lib"
+ORCH_INCDIR="-I$LMDGCM/../../lib"
+ORCH_LIBDIR="-L$LMDGCM/../../lib"
+ORCH_LIB=
+
+OASIS_INCDIR="-I$LMDGCM/../../oasis3-mct/BLD/build/lib/psmile.MPI1"
+OASIS_LIBDIR="-L$LMDGCM/../../oasis3-mct/BLD/lib"
+OASIS_LIB="-lpsmile.MPI1 -lscrip -lmct -lmpeu"
+
+INCA_INCDIR="-I$LMDGCM/../INCA/build/inc"
+INCA_LIBDIR="-L$LMDGCM/../INCA/build/lib"
+INCA_LIB="-lchimie"