Changeset 1731


Ignore:
Timestamp:
Mar 5, 2013, 10:00:50 AM (11 years ago)
Author:
Ehouarn Millour
Message:

Update of "install.sh" script to make it work on Ada.
EM

Location:
BOL/script_install
Files:
3 edited

Legend:

Unmodified
Added
Removed

  • BOL/script_install/LISMOI.testing

    r1693 r1731  
    15315320121016.testing                1669    OK      OK      OK      OK
    15415420121016.testing                1669    OK      OK      OK      OK
     15520130111.testing                1707    OK      OK      OK      OK
     156

  • BOL/script_install/LISMOI.trunk

    r1693 r1731  
    28028020121121.trunk          1685    OK      OK      OK      OK
    28128120121206.trunk          1689    OK      OK      OK      -
     28220121212.trunk          1692    OK      OK      OK      -
     28320121212.trunk          1693    OK      OK      OK      -
     28420121212.trunk          1693    OK      OK      OK      -
     285
     28620121219.trunk          1696    OK      OK      OK      noc
     28720121219.trunk          1698    OK      OK      OK      OK
     28820121220.trunk          1700    OK      OK      OK      OK
     28920121221.trunk          1704    OK      OK      OK      OK
     29020130109.trunk          1706    OK      OK      OK      OK
     29120130118.trunk          1714    OK      OK      OK      OK
     29220130125.trunk          1719    -                       
     29320130125.trunk          1720    OK      OK      OK      OK
     29420130129.trunk          1722    OK      OK      OK      OK
     29520130207.trunk          1724    OK      OK      OK      OK
     29620130227.trunk          1727    OK      OK      OK      OK
     297

  • BOL/script_install/install.sh

    r1710 r1731  
    102102   # ifort
    103103   if [ $real = r8 ] ; then OPTPREC="-real-size 64 -DNC_DOUBLE" ; fi
    104    OPTIM="-O2 -ip -mkl=sequential -align all -static "
     104   OPTIM="-O2 -fp-model strict -ip -align all "
    105105   # with ifort, compile with fcm
    106106   compile_with_fcm=1
    … …  
    116116
    117117##########################################################################
    118 # If installing on know machines such as NEC Brodie
     118# If installing on know machines such as IBM x3750 (Ada)
    119119# at IDRIS, don't check for available software and don"t install netcdf
    120 if [ $hostname = brodie ] ; then
    121 netcdf=0
    122 check_linux=0
    123 pclinux=0
     120if [ $hostname = ada338 ] ; then
     121  netcdf=0 # no need to recompile netcdf, alreday available
     122  check_linux=0
     123  pclinux=0
     124  ioipsl=0 # no need to recompile ioipsl, already available
     125  #netcdf="/smplocal/pub/NetCDF/4.1.3"
     126  compilo="ifort"
     127  fmod='module '
     128  if [ $real = r8 ] ; then OPTPREC="-real-size 64 -DNC_DOUBLE" ; fi
     129  OPTIM="-O2 -fp-model strict -ip -axAVX,SSE4.2 -align all "
     130  OPTIMGCM="$OPTIM $OPTPREC"
    124131fi
    125132##########################################################################
    … …  
    266273make check
    267274make install
    268 fi
     275fi # of if [ $netcdf = 1 ]
    269276
    270277echo OK2 ioipsl=$ioipsl
    271278echo '##########################################################'
    272 echo Installing MODIPSL, the installation package manager for the
    273 echo IPSL models and tools
     279echo 'Installing MODIPSL, the installation package manager for the '
     280echo 'IPSL models and tools'
    274281echo '##########################################################'
    275282
    … …  
    281288
    282289if [ $ioipsl = 1 ] ; then
    283 cd $MODEL/modipsl
    284 \rm -r lib/*
    285 
    286 cd util
    287 
    288 if [ $compilo = pgf90 ] ; then
    289   fmod='module '
    290 elif [ $compilo = g95 ] ; then
    291   fmod='fmod='
    292 elif [ $compilo = ifort ] ; then
    293   fmod='module '
    294 else # gfortran
    295   fmod='I '
    296 fi
    297 cp AA_make.gdef AA_make.orig
    298 sed -e 's/^\#.*.g95.*.\#.*.$/\#/' AA_make.gdef > tmp
    299 sed -e "s:F_L = g95:F_L = $compilo:" -e "s:F_C = g95 -c:F_C = $compilo -c": \
    300 -e 's/g95.*.w_w.*.(F_D)/g95      w_w = '"$OPTIMGCM"'/' \
    301 -e 's:g95.*.NCDF_INC.*.$:g95      NCDF_INC= '"$ncdfdir"'/include:' \
    302 -e 's:g95.*.NCDF_LIB.*.$:g95      NCDF_LIB= -L'"$ncdfdir"'/lib -lnetcdf:' \
    303 -e "s:-fmod=:-$fmod:" -e 's/-fno-second-underscore//' \
    304 -e 's:#-Q- g95      M_K = gmake:#-Q- g95      M_K = make:' \
    305 tmp >| AA_make.gdef
    306 
    307 
    308 if [ "$use_shell" = "ksh" ] ; then
     290  cd $MODEL/modipsl
     291  \rm -r lib/*
     292
     293  cd util
     294
     295  if [ $compilo = pgf90 ] ; then
     296    fmod='module '
     297  elif [ $compilo = g95 ] ; then
     298    fmod='fmod='
     299  elif [ $compilo = ifort ] ; then
     300    fmod='module '
     301  else # gfortran
     302    fmod='I '
     303  fi
     304  cp AA_make.gdef AA_make.orig
     305  sed -e 's/^\#.*.g95.*.\#.*.$/\#/' AA_make.gdef > tmp
     306  sed -e "s:F_L = g95:F_L = $compilo:" -e "s:F_C = g95 -c:F_C = $compilo -c": \
     307  -e 's/g95.*.w_w.*.(F_D)/g95      w_w = '"$OPTIMGCM"'/' \
     308  -e 's:g95.*.NCDF_INC.*.$:g95      NCDF_INC= '"$ncdfdir"'/include:' \
     309  -e 's:g95.*.NCDF_LIB.*.$:g95      NCDF_LIB= -L'"$ncdfdir"'/lib -lnetcdf:' \
     310  -e "s:-fmod=:-$fmod:" -e 's/-fno-second-underscore//' \
     311  -e 's:#-Q- g95      M_K = gmake:#-Q- g95      M_K = make:' \
     312  tmp >| AA_make.gdef
     313
     314
     315  if [ "$use_shell" = "ksh" ] ; then
     316    if [ "$pclinux" = 1 ] ; then
     317       ./ins_make -t g95 # We use lines for g95 even for the other compilers
     318    fi
     319  else # bash
     320    sed -e s:/bin/ksh:/bin/bash:g ins_make > ins_make.bash
     321    chmod u=rwx ins_make.bash
     322    if [ "$pclinux" = 1 ] ; then
     323    ./ins_make.bash -t g95 # We use lines for g95 even for the other compilers
     324    else
     325    ./ins_make.bash
     326    fi
     327  fi # of if [ "$use_shell" = "ksh" ]
     328
     329  echo '##########################################################'
     330  echo 'Compiling IOIPSL, the interface library with Netcdf'
     331  echo '##########################################################'
     332
     333  cd $MODEL/modipsl/modeles/IOIPSL/src
     334  if [ "$use_shell" = "bash" ] ; then
     335    cp Makefile Makefile.ksh
     336    sed -e s:/bin/ksh:/bin/bash:g Makefile.ksh > Makefile
     337  fi
    309338  if [ "$pclinux" = 1 ] ; then
    310      ./ins_make -t g95 # We use lines for g95 even for the other compilers
    311   fi
    312 else # bash
    313   sed -e s:/bin/ksh:/bin/bash:g ins_make > ins_make.bash
    314   chmod u=rwx ins_make.bash
    315   if [ "$pclinux" = 1 ] ; then
    316   ./ins_make.bash -t g95 # We use lines for g95 even for the other compilers
    317   else
    318   ./ins_make.bash
    319   fi
    320 fi
    321 
    322 echo '##########################################################'
    323 echo Compiling IOIPSL, the interface library with Netcdf
    324 echo '##########################################################'
    325 
    326 cd $MODEL/modipsl/modeles/IOIPSL/src
    327 if [ "$use_shell" = "bash" ] ; then
    328   cp Makefile Makefile.ksh
    329   sed -e s:/bin/ksh:/bin/bash:g Makefile.ksh > Makefile
    330 fi
    331 if [ "$pclinux" = 1 ] ; then
    332   # Build IOIPSL modules and library
    333   make clean
     339    # Build IOIPSL modules and library
     340    make clean
     341    make
     342    if [ $compilo = gfortran ] ; then # copy module files to lib
     343      cp -f *.mod ../../../lib
     344    fi
     345    # Build IOIPSL tools (ie: "rebuild", if present)
     346    if [ -f $MODEL/modipsl/modeles/IOIPSL/tools/rebuild ] ; then
     347      cd $MODEL/modipsl/modeles/IOIPSL/tools
     348      # adapt Makefile & rebuild script if in bash
     349      if [ "$use_shell" = "bash" ] ; then
     350        cp Makefile Makefile.ksh
     351        sed -e s:/bin/ksh:/bin/bash:g Makefile.ksh > Makefile
     352        cp rebuild rebuild.ksh
     353        sed -e 's:/bin/ksh:/bin/bash:g' \
     354            -e 's:print -u2:echo:g' \
     355            -e 's:print:echo:g' rebuild.ksh > rebuild
     356      fi
     357      make clean
     358      make
     359    fi
     360  fi # of if [ "$pclinux" = 1 ]
     361
     362else # of if [ $ioipsl = 1 ]
     363  if [ $hostname = ada338 ] ; then
     364    cd $MODEL/modipsl
     365    cd util
     366
     367    cp AA_make.gdef AA_make.orig
     368    sed -e 's/^\#.*.g95.*.\#.*.$/\#/' AA_make.gdef > tmp
     369    sed -e "s:F_L = g95:F_L = $compilo:" -e "s:F_C = g95 -c:F_C = $compilo -c": \
     370    -e 's/g95.*.w_w.*.(F_D)/g95      w_w = '"$OPTIMGCM"'/' \
     371    -e 's:g95.*.NCDF_INC.*.$:g95      NCDF_INC= -I/smplocal/pub/HDF5/1.8.9/seq/include -I/smplocal/pub/NetCDF/4.1.3/include:' \
     372    -e 's:g95.*.NCDF_LIB.*.$:g95      NCDF_LIB= -L/smplocal/pub/NetCDF/4.1.3/lib -lnetcdff -lnetcdf:' \
     373    -e "s:-fmod=:-$fmod:" -e 's/-fno-second-underscore//' \
     374    -e 's:#-Q- g95      M_K = gmake:#-Q- g95      M_K = make:' \
     375    tmp >| AA_make.gdef
     376
     377    ./ins_make -t g95 # We use lines for g95 even for the other compilers
     378
     379    # on Ada, IOIPSL is already installed in ~rpsl035/IOIPSL_PLUS
     380    # so link it to current settings
     381    cd $MODEL/modipsl/modeles/
     382    \rm -r -f IOIPSL
     383    ln -s ~rpsl035/IOIPSL_PLUS IOIPSL
     384    cd ..
     385    ln -s ~rpsl035/IOIPSL_PLUS/modipsl/bin/* bin/
     386    ln -s ~rpsl035/IOIPSL_PLUS/modipsl/lib/* lib/
     387
     388  fi # of if [ $hostname = ada338 ]
     389fi # of if [ $ioipsl = 1 ]
     390
     391if [ "$veget" = 1 ] ; then
     392  echo '########################################################'
     393  echo 'Compiling ORCHIDEE, the continental surfaces model '
     394  echo '########################################################'
     395  cd $MODEL/modipsl/modeles/ORCHIDEE
     396  cd src_parameters
     397  # A trick to compile ORCHIDEE depending on if we are using real*4 or real*8
     398
     399  \cp reqdprec.$real reqdprec.f90
    334400  make
    335401  if [ $compilo = gfortran ] ; then # copy module files to lib
    336402    cp -f *.mod ../../../lib
    337403  fi
    338   # Build IOIPSL tools (ie: "rebuild", if present)
    339   if [ -f $MODEL/modipsl/modeles/IOIPSL/tools/rebuild ] ; then
    340     cd $MODEL/modipsl/modeles/IOIPSL/tools
    341     # adapt Makefile & rebuild script if in bash
    342     if [ "$use_shell" = "bash" ] ; then
    343       cp Makefile Makefile.ksh
    344       sed -e s:/bin/ksh:/bin/bash:g Makefile.ksh > Makefile
    345       cp rebuild rebuild.ksh
    346       sed -e 's:/bin/ksh:/bin/bash:g' \
    347           -e 's:print -u2:echo:g' \
    348           -e 's:print:echo:g' rebuild.ksh > rebuild
    349     fi
    350     make clean
    351     make
    352   fi
    353 else
    354   # we're on brodie
    355   sxgmake clean
    356   sxgmake
    357 fi
    358 
    359 if [ "$veget" = 1 ] ; then
    360 echo '########################################################'
    361 echo Compiling ORCHIDEE, the continental surfaces model
    362 echo '########################################################'
    363 cd $MODEL/modipsl/modeles/ORCHIDEE
    364 cd src_parameters
    365 # A trick to compile ORCHIDEE depending on if we are using real*4 or real*8
    366 
    367 
    368 \cp reqdprec.$real reqdprec.f90
    369 make
    370 if [ $compilo = gfortran ] ; then # copy module files to lib
    371   cp -f *.mod ../../../lib
    372 fi
    373 cd ../src_stomate
    374 make
    375 if [ $compilo = gfortran ] ; then # copy module files to lib
    376   cp -f *.mod ../../../lib
    377 fi
    378 cd ../src_sechiba
    379 make
    380 if [ $compilo = gfortran ] ; then # copy module files to lib
    381   cp -f *.mod ../../../lib
    382 fi
    383 fi
    384 fi
    385 
     404  cd ../src_stomate
     405  make
     406  if [ $compilo = gfortran ] ; then # copy module files to lib
     407    cp -f *.mod ../../../lib
     408  fi
     409  cd ../src_sechiba
     410  make
     411  if [ $compilo = gfortran ] ; then # copy module files to lib
     412    cp -f *.mod ../../../lib
     413  fi
     414fi # of if [ "$veget" = 1 ]
    386415
    387416# Ehouarn: it may be directory LMDZ4 or LMDZ5 depending on tar file...
    388417if [[ -d $MODEL/modipsl/modeles/LMDZ4 ]] ; then
    389418  echo '##########################################################'
    390   echo 'Compilation de LMDZ4'
     419  echo 'Compiling LMDZ4'
    391420  echo '##########################################################'
    392421  cd $MODEL/modipsl/modeles/LMDZ4
    … …  
    541570echo "bld::tool::SHELL   $whereisthatshell" >> bld.cfg
    542571
     572fi # of if [ "$pclinux" = 1 ]
     573
     574
     575cd $MODEL/modipsl/modeles/LMDZ?
     576
    543577### Modify makelmdz_fcm and makelmdz to use ORCHIDEE in the bench:
    544578### remove liborglob.a and libparallel.a
    … …  
    552586    makelmdz.orig > makelmdz
    553587
    554 fi # of if [ "$pclinux" = 1 ]
    555588
    556589##################################################################
    … …  
    558591##################################################################
    559592ok_veget=false
    560 if [ "$veget" = 1 ] ; then $ok_veget = true; fi
     593if [ "$veget" = 1 ] ; then $ok_veget = true ; fi
    561594if [ $compile_with_fcm = 1 ] ; then
    562595# Compile with makelmdz_fcm
     596   if [ "$pclinux" = 1 ] ; then
    563597        ./makelmdz_fcm -d ${grid_resolution} -arch local -v $ok_veget gcm
     598   else
     599   # we are on Ada
     600        ./makelmdz_fcm -d ${grid_resolution} -arch X64_ADA -v $ok_veget gcm
     601   fi
    564602else
    565603# Comple with makegcm:
    … …  
    570608fi
    571609
    572 if [ -f gcm.e ] || [ -f bin/gcm_${grid_resolution}_phylmd_seq_orch.e ] || [ -f bin/gcm_${grid_resolution}_phylmd_seq.e ]  ; then
    573 echo '##########################################################'
    574 echo Compilation successfull !!
    575 echo '##########################################################'
    576 else
    577 echo Compilation failed !!
     610if [ -f gcm.e ] || [ -f bin/gcm_${grid_resolution}_phylmd_seq_orch.e ] || [ -f bin/gcm_${grid_resolution}_phylmd_seq.e ] ; then
     611echo '##########################################################'
     612echo 'Compilation successfull !! '
     613echo '##########################################################'
     614else
     615echo 'Compilation failed !!'
    578616exit
    579617fi
    … …  
    587625
    588626echo '##########################################################'
    589 echo Running a test run
     627echo ' Running a test run '
    590628echo '##########################################################'
    591629
    … …  
    607645fi
    608646
    609 if [ $hostname = brodie ] ; then
    610 echo to run the bench, you must log on to Brodie01
    611 echo and then change directory to `pwd`/BENCH${grid_resolution}
    612 echo and run the gcm
    613 exit
    614 fi
    615 
    616647cd BENCH${grid_resolution}
    617648./bench.sh > bench.out  2>&1
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