Changeset 1239 for LMDZ4/branches/LMDZ4-dev/libf

Timestamp:

Sep 8, 2009, 11:16:12 AM (15 years ago)

Author:

lguez

Message:

Print only defined values of "timeyear" in procedure "limit_netcdf".

Processing of input variable "read_climoz" by procedure "conf_phys"
was broken in revision 1227. Fixed it back (no need for a variable
"read_climoz_omp"; "read_climoz" is OpenMP shared).

Procedure "regr_lat_time_climoz" now takes into account missing values
in the input field.

Location:

LMDZ4/branches/LMDZ4-dev/libf

Files:

• dyn3d/limit_netcdf.F (modified) (4 diffs)
• dyn3dpar/limit_netcdf.F (modified) (4 diffs)
• phylmd/conf_phys.F90 (modified) (3 diffs)
• phylmd/regr_lat_time_climoz_m.F90 (modified) (7 diffs)

LMDZ4/branches/LMDZ4-dev/libf/dyn3d/limit_netcdf.F

@@ -406 +406 @@
       ENDDO
 
-      PRINT 222, timeyear
+      PRINT 222, timeyear(:lmdep)
 222   FORMAT(2x,' Time year ',10f6.1)
 c
@@ -623 +623 @@
          timeyear(l) = tmidmonth(l)
       ENDDO
-      PRINT 222,  timeyear
+      PRINT 222,  timeyear(:lmdep)
 c
       PRINT*, 'Interpolation temporelle'
@@ -942 +942 @@
          timeyear(l) = tmidmonth(l)
       ENDDO
-      print 222,  timeyear
+      print 222,  timeyear(:lmdep)
 c
 C interpolation temporelle
@@ -1137 +1137 @@
          timeyear(l) = timecoord(l)
       ENDDO
-      print 222,  timeyear
+      print 222,  timeyear(:lmdep)
 c
 C interpolation temporelle

LMDZ4/branches/LMDZ4-dev/libf/dyn3dpar/limit_netcdf.F

@@ -406 +406 @@
       ENDDO
 
-      PRINT 222, timeyear
+      PRINT 222, timeyear(:lmdep)
 222   FORMAT(2x,' Time year ',10f6.1)
 c
@@ -623 +623 @@
          timeyear(l) = tmidmonth(l)
       ENDDO
-      PRINT 222,  timeyear
+      PRINT 222,  timeyear(:lmdep)
 c
       PRINT*, 'Interpolation temporelle'
@@ -942 +942 @@
          timeyear(l) = tmidmonth(l)
       ENDDO
-      print 222,  timeyear
+      print 222,  timeyear(:lmdep)
 c
 C interpolation temporelle
@@ -1137 +1137 @@
          timeyear(l) = timecoord(l)
       ENDDO
-      print 222,  timeyear
+      print 222,  timeyear(:lmdep)
 c
 C interpolation temporelle

LMDZ4/branches/LMDZ4-dev/libf/phylmd/conf_phys.F90

@@ -146 +146 @@
   LOGICAL,SAVE :: ok_strato_omp
   LOGICAL,SAVE :: ok_hines_omp
-  LOGICAL      :: read_climoz_omp
   LOGICAL      :: carbon_cycle_tr_omp
   LOGICAL      :: carbon_cycle_cpl_omp
@@ -1282 +1281 @@
   call getin('ecrit_LES', ecrit_LES_omp)
 !
-  read_climoz_omp = .false. ! default value
-  call getin('read_climoz', read_climoz_omp)
+  read_climoz = .false. ! default value
+  call getin('read_climoz', read_climoz)
 
   carbon_cycle_tr_omp=.FALSE.
@@ -1421 +1420 @@
     ok_LES = ok_LES_omp
     ecrit_LES = ecrit_LES_omp
-    read_climoz = read_climoz_omp
     carbon_cycle_tr = carbon_cycle_tr_omp
     carbon_cycle_cpl = carbon_cycle_cpl_omp

LMDZ4/branches/LMDZ4-dev/libf/phylmd/regr_lat_time_climoz_m.F90

@@ -21 +21 @@
 
     ! The input field depends on time, pressure level and latitude.
+
+    ! If the input field has missing values, they must be signaled by
+    ! the "missing_value" attribute. At each latitude and each date, the
+    ! missing values are replaced by the lowest valid value above missing
+    ! values.
+
     ! We assume that the input field is a step function of latitude
     ! and that the input latitude coordinate gives the centers of steps.
@@ -52 +58 @@
     ! -- time increases (even though we do not use values of the input
     ! time coordinate);
+    ! -- missing values are vertically contiguous, at the bottom of
+    ! the vertical domain;
+    ! -- there is no missing value at the top level of the atmosphere.
 
     use regr1_step_av_m, only: regr1_step_av
@@ -57 +66 @@
     use netcdf95, only: nf95_open, nf95_close, nf95_inq_varid, handle_err, &
          nf95_put_var, nf95_gw_var
-    use netcdf, only: nf90_nowrite, nf90_get_var
+    use netcdf, only: nf90_nowrite, nf90_get_att, nf90_noerr
 
     ! Variables local to the procedure:
@@ -89 +98 @@
     real, pointer:: o3_in(:, :, :) ! (n_lat, n_plev, 12 or 0:13)
     ! (ozone climatology from the input file)
-    ! ("o3_in(j, l, month)" is at latitude "latitude(j)" and pressure
-    ! level "plev(l)". "month" is between 1 and 12 or between 0 and 13)
+    ! ("o3_in(j, k, l)" is at latitude "latitude(j)" and pressure
+    ! level "plev(k)". "l" is between 1 and 12 or between 0 and 13)
+
+    real missing_value
 
     real, allocatable:: o3_regr_lat(:, :, :) ! (jjm + 1, n_plev, 0:13)
@@ -103 +114 @@
     ! [- pi / 2, rlatv(jjm)]
     ! respectively.
-    ! "o3_regr_lat(:, l, :)" is for pressure level "plev(l)".
+    ! "o3_regr_lat(:, k, :)" is for pressure level "plev(k)".
     ! Last dimension is month number.)
 
     real, allocatable:: o3_out(:, :, :) ! (jjm + 1, n_plev, 360)
     ! (regridded ozone climatology)
-    ! ("o3_out(j, l, day)" is at latitude "rlatu(j)", pressure
-    ! level "plev(l)" and date "January 1st 0h" + "tmidday(day)", in a
+    ! ("o3_out(j, k, l)" is at latitude "rlatu(j)", pressure
+    ! level "plev(k)" and date "January 1st 0h" + "tmidday(l)", in a
     ! 360-day calendar.)
 
-    integer j
-    integer varid_in, varid_out, varid_plev, varid_time, varid ! (for NetCDF)
-
-    real, parameter:: tmidmonth(0:13) = (/(-15. + 30. * j, j = 0, 13)/)
+    integer j, k, l
+
+    ! For NetCDF:
+    integer varid_in, varid_out, varid_plev, varid_time, varid, ncerr
+
+    real, parameter:: tmidmonth(0:13) = (/(-15. + 30. * l, l = 0, 13)/)
     ! (time to middle of month, in days since January 1st 0h, in a
     ! 360-day calendar)
@@ -121 +134 @@
     ! interpolated between the December and the January value.)
 
-    real, parameter:: tmidday(360) = (/(j + 0.5, j = 0, 359)/)
+    real, parameter:: tmidday(360) = (/(l + 0.5, l = 0, 359)/)
     ! (time to middle of day, in days since January 1st 0h, in a
     ! 360-day calendar)
@@ -175 +188 @@
     if (desc_plev) o3_in = o3_in(:, n_plev:1:-1, :)
 
+    ncerr = nf90_get_att(ncid_in, varid_in, "missing_value", missing_value)
+    if (ncerr == nf90_noerr) then
+       do l = 1, size(o3_in, 3)
+          do j = 1, n_lat
+             ! Find missing values, starting from top of atmosphere
+             ! and going down.
+             ! We assume that the highest level contains no missing value.
+             k = 2
+             do
+                if (o3_in(j, k, l) == missing_value .or. k == n_plev) exit
+                k = k + 1
+             end do
+             ! Replace missing values with the valid value at the
+             ! lowest level above missing values:
+             if (o3_in(j, k, l) == missing_value) &
+                  o3_in(j, k:n_plev, l) = o3_in(j, k-1, l)
+          end do
+       end do
+    else
+       print *, "regr_lat_time_climoz: no missing value attribute"
+    end if
+    
     call nf95_close(ncid_in)