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source: LMDZ6/trunk/makelmdz_fcm @ 4046

Last change on this file since 4046 was 3997, checked in by Ehouarn Millour, 4 years ago
Code cleanup. Remove obsolete "dyn3dpar" dynamics and make dyn3dmem the default parallel core in the maklmdz[_fcm] scripts. EM
Property copyright set to Name of program: LMDZ Creation date: 1984 Version: LMDZ5 License: CeCILL version 2 Holder: Laboratoire de m\'et\'eorologie dynamique, CNRS, UMR 8539 See the license file in the root directory Property svn:eol-style set to `native` Property svn:executable set to ``* Property svn:keywords set to `Author Date Id Revision`
File size: 22.2 KB

Line
1	#!/bin/bash
2	# $Id: makelmdz_fcm 3997 2021-11-02 10:24:08Z dcugnet $
3	# This is a script in Bash.
4
5	# FH : on ne cr\'ee plus le fichier arch.mk qui est suppos\'e exister par
6	# FH : ailleurs.
7	# FH : ulterieurement, ce fichier sera pr\'e-existant pour une s\'erie
8	# FH : de configurations en versions optimis\'ees et debug qui seront
9	# FH : li\'es (ln -s) avec arch.mk en fonction de l'architecture.
10	# FH : Pour le moment, cette version est en test et on peut cr\'eer les
11	# FH : arch.mk en lan\c{}cant une premi\`ere fois makegcm.
12	#
13	##set -x
14	set -e
15	########################################################################
16	# options par defaut pour la commande make
17	########################################################################
18
19	dim="96x72x19"
20	physique=lmd
21	filtre=filtrez
22	grille=reg
23	couple=false
24	veget=false
25	inlandsis=false
26	rrtm=false
27	rad="old"
28	dust=false
29	strataer=false
30	chimie=false
31	parallel=none
32	paramem="mem"
33	compil_mod=prod
34	io=ioipsl
35	LIBPREFIX=""
36	cosp=false
37	cosp2=false
38	cospv2=false
39	job=1
40	full=''
41	libphy=false
42	isotopes=false
43	isoverif=false
44	diagiso=false
45	isotrac=false
46
47	arch_defined="FALSE"
48	arch_path="arch"
49	arch_default_path="arch"
50
51	LMDGCM=`/bin/pwd`
52	LIBOGCM=$LMDGCM/libo
53	LIBFGCM=$LMDGCM/libf
54	DYN_COMMON_PATH=$LIBFGCM/dyn3d_common
55	# path for optional packages, but default set to ".void_dir"
56	FILTRE_PATH=$LMDGCM/.void_dir
57	DYN_PHYS_PATH=$LMDGCM/.void_dir
58	DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir
59	PHY_COMMON_PATH=$LMDGCM/.void_dir
60	RAD_PATH=$LMDGCM/.void_dir
61	INLANDSIS_PATH=$LMDGCM/.void_dir
62	DUST_PATH=$LMDGCM/.void_dir
63	STRATAER_PATH=$LMDGCM/.void_dir
64	COSP_PATH=$LMDGCM/.void_dir
65	fcm_path=$LMDGCM/tools/fcm/bin
66
67	########################################################################
68	# Quelques initialisations de variables du shell.
69	########################################################################
70
71	CPP_KEY="IN_LMDZ"
72	INCLUDE=""
73	LIB=""
74	adjnt=""
75	COMPIL_FFLAGS="%PROD_FFLAGS"
76	PARA_FFLAGS=""
77	PARA_LD=""
78	EXT_SRC=""
79
80	########################################################################
81	# lecture des options de mymake
82	########################################################################
83
84	while (($# > 0))
85	do
86	case $1 in
87	"-h") cat <<fin
88	Usage :
89	makelmdz_fcm [options] -arch nom_arch exec
90	[-h] : brief help
91	[-d [[IMx]JMx]LM] : IM, JM, LM are the dimensions in x, y, z (default: $dim)
92	[-p PHYS] : set of physical parametrizations (in libf/phyPHYS), (default: lmd)
93	[-prod / -dev / -debug] : compilation mode production (default) / developement / debug
94	[-c false/MPI1/OMCT] : coupling with ocean model : MPI1/OMCT/false (default: false)
95	[-v false/orchidee2.0/orchidee1.9/true] : version of the vegetation model to include (default: false)
96	false : no vegetation model
97	orchidee2.1 : compile using ORCHIDEE 2.1 (or more recent version)
98	orchidee2.0 : compile using ORCHIDEE 2.0
99	orchidee1.9 : compile using ORCHIDEE up to the version including OpenMP in ORCHIDEE : tag 1.9-1.9.5(version AR5)-1.9.6
100	true : (obsolete; for backward compatibility) use ORCHIDEE tag 1.9-1.9.6
101	[-chimie INCA/false] : with INCA chemistry model or without (default: false)
102	[-cosp true/false] : compile with/without cosp package (default: false)
103	[-cosp2 true/false] : compile with/without cosp2 package (default: false)
104	[-cospv2 true/false] : compile with/without cospv2 package (default: false)
105	[-inlandsis true/false] : compile with/without inlandsis package (default: false)
106	[-rrtm true/false] : compile with/without rrtm package (default: false)
107	[-rad old/rrtm/ecrad] : compile with old/rrtm/ecrad radiatif code (default: old)
108	[-dust true/false] : compile with/without the dust package by Boucher and co (default: false)
109	[-strataer true/false] : compile with/without the strat aer package by Boucher and co (default: false)
110	[-isotopes true/false] : compile with/without water isotopes in the physics
111	[-isoverif true/false] : compile with/without verifications for water isotopes in the physics
112	[-diagiso true/false] : compile with/without special diagnostics for water isotopes in the physics
113	[-isotrac true/false] : compile with/without tracers of water isotopes in the physics
114	[-parallel none/mpi/omp/mpi_omp] : parallelism (default: none) : mpi, openmp or mixted mpi_openmp
115	[-g GRI] : grid configuration in dyn3d/GRI_xy.h (default: reg, inclues a zoom)
116	[-io ioipsl/mix/xios] : Input/Output library (default: ioipsl)
117	[-include INCLUDES] : extra include path to add
118	[-cpp CPP_KEY] : additional preprocessing definitions
119	[-adjnt] : adjoint model, not operational ...
120	[-mem] : reduced memory dynamics (obsolete flag; always on in parallel mode)
121	[-filtre NOMFILTRE] : use filtre from libf/NOMFILTRE (default: filtrez)
122	[-link LINKS] : additional links with other libraries
123	[-j n] : active parallel compiling on ntask
124	[-full] : full recompiling
125	[-libphy] : only compile physics package (no dynamics or main program)
126	[-fcm_path path] : path to the fcm tool (default: tools/fcm/bin)
127	[-ext_src path] : path to an additional set of routines to compile with the model
128	[-arch_path path] : path to architecture files (default: $arch_default_path)
129	-arch nom_arch : target architecture
130	exec : executable to build
131	fin
132	exit;;
133
134	"-d")
135	dim=$2 ; shift ; shift ;;
136
137	"-p")
138	physique="$2" ; shift ; shift ;;
139
140	"-g")
141	grille="$2" ; shift ; shift ;;
142
143	"-c")
144	couple="$2" ; shift ; shift ;;
145
146	"-prod")
147	compil_mod="prod" ; shift ;;
148
149	"-dev")
150	compil_mod="dev" ; shift ;;
151
152	"-debug")
153	compil_mod="debug" ; shift ;;
154
155	"-io")
156	io="$2" ; shift ; shift ;;
157
158	"-v")
159	veget="$2" ; shift ; shift ;;
160
161	"-inlandsis")
162	inlandsis="$2" ; shift ; shift ;;
163
164	"-rrtm")
165	rrtm="$2" ; if [ "$2" = "false" ] ; then rad="old" ; else rad="rrtm" ; fi ; shift ; shift ;;
166
167	"-rad")
168	rad="$2" ; shift ; shift ;;
169
170	"-dust")
171	dust="$2" ; shift ; shift ;;
172
173	"-strataer")
174	strataer="$2" ; shift ; shift ;;
175
176	"-chimie")
177	chimie="$2" ; shift ; shift ;;
178
179	"-isotopes")
180	isotopes="$2" ; shift ; shift ;;
181
182	"-isoverif")
183	isoverif="$2" ; shift ; shift ;;
184
185	"-diagiso")
186	diagiso="$2" ; shift ; shift ;;
187
188	"-isotrac")
189	isotrac="$2" ; shift ; shift ;;
190
191	"-parallel")
192	parallel="$2" ; shift ; shift ;;
193
194	"-include")
195	INCLUDE="$INCLUDE -I$2" ; shift ; shift ;;
196
197	"-cpp")
198	CPP_KEY="$CPP_KEY $2" ; shift ; shift ;;
199
200	"-adjnt")
201	echo "not operational ... work to be done here ";exit
202	opt_dep="$opt_dep adjnt" ; adjnt="-ladjnt -ldyn3d "
203	optim="$optim -Dadj" ; shift ;;
204
205	"-cosp")
206	cosp="$2" ; shift ; shift ;;
207
208	"-cosp2")
209	cosp2="$2" ; shift ; shift ;;
210
211	"-cospv2")
212	cospv2="$2" ; shift ; shift ;;
213
214	"-mem")
215	echo "option -mem is obsolete (now always on in parallel)"
216	paramem="mem" ; shift ;;
217
218	"-filtre")
219	filtre=$2 ; shift ; shift ;;
220
221	"-link")
222	LIB="$LIB $2" ; shift ; shift ;;
223
224	"-fcm_path")
225	fcm_path=$2 ; shift ; shift ;;
226
227	"-ext_src")
228	EXT_SRC=$2 ; shift ; shift ;;
229
230	"-j")
231	job=$2 ; shift ; shift ;;
232
233	"-full")
234	full="-full" ; shift ;;
235
236	"-libphy")
237	libphy="true" ; shift ;;
238
239	"-arch")
240	arch=$2 ; arch_defined="TRUE" ; shift ; shift ;;
241
242	"-arch_path")
243	arch_path=$2 ; arch_path_defined="TRUE"; shift ; shift ;;
244
245	*)
246	code="$1" ; shift ;;
247	esac
248	done
249
250	###############################################################
251	# path to fcm
252	###############################################################
253	# handle case when provided path to fcm was given as a relative
254	# path (from makelmdz_fcm script directory) and not an absolute path
255	if [[ ${fcm_path:0:1} != "/" ]] ; then
256	# prepend with makelmdz_fcm location
257	fcm_path=$(cd $(dirname $0) ; pwd)"/"${fcm_path}
258	fi
259
260	# add fcm_path to PATH
261	export PATH=${fcm_path}:${PATH}
262
263	echo "Path to fcm:"
264	echo ${fcm_path}
265
266	###############################################################
267	# lecture des chemins propres \`a l'architecture de la machine #
268	###############################################################
269	rm -f .void_file
270	echo > .void_file
271	rm -rf .void_dir
272	mkdir .void_dir
273
274	if [[ "$arch_defined" == "TRUE" ]]
275	then
276	rm -f arch.path
277	rm -f arch.fcm
278	rm -f arch.env
279
280	if test -f $arch_path/arch-${arch}.path
281	then
282	ln -s $arch_path/arch-${arch}.path arch.path
283	elif test -f $arch_default_path/arch-${arch}.path
284	then
285	ln -s $arch_default_path/arch-${arch}.path arch.path
286	fi
287
288	if test -f $arch_path/arch-${arch}.fcm
289	then
290	ln -s $arch_path/arch-${arch}.fcm arch.fcm
291	elif test -f $arch_default_path/arch-${arch}.fcm
292	then
293	ln -s $arch_default_path/arch-${arch}.fcm arch.fcm
294	fi
295
296	if test -f $arch_path/arch-${arch}.env
297	then
298	ln -s $arch_path/arch-${arch}.env arch.env
299	elif test -f $arch_default_path/arch-${arch}.env
300	then
301	ln -s $arch_default_path/arch-${arch}.env arch.env
302	else
303	ln -s .void_file arch.env
304	fi
305	# source architecture PATH and ENV files
306	source arch.env
307	source arch.path
308	else
309	echo "You must define a target architecture"
310	exit 1
311	fi
312
313	########################################################################
314	# Definition des clefs CPP, des chemins des includes et modules
315	# et des libraries
316	########################################################################
317
318	if [[ "$compil_mod" == "prod" ]]
319	then
320	COMPIL_FFLAGS="%PROD_FFLAGS"
321	elif [[ "$compil_mod" == "dev" ]]
322	then
323	COMPIL_FFLAGS="%DEV_FFLAGS"
324	elif [[ "$compil_mod" == "debug" ]]
325	then
326	COMPIL_FFLAGS="%DEBUG_FFLAGS"
327	fi
328
329	phys_root=$physique
330	if [[ "${physique:0:3}" == "lmd" ]] ; then phys_root=lmd ; fi
331	if [[ "${physique:0:4}" == "mars" ]] ; then phys_root=mars ; fi
332	if [[ "${physique:0:3}" == "std" ]] ; then phys_root=std ; fi
333	if [[ "${physique:0:5}" == "venus" ]] ; then phys_root=venus ; fi
334	if [[ "${physique:0:5}" == "titan" ]] ; then phys_root=titan ; fi
335	if [[ "${physique:0:3}" == "dev" ]] ; then phys_root=dev ; fi
336
337	if [[ "$physique" != "nophys" ]]
338	then
339	#We'll use some physics
340	CPP_KEY="$CPP_KEY CPP_PHYS"
341	if [[ "${phys_root}" == "lmd" ]]
342	then
343	#For lmd physics, default planet type is Earth
344	CPP_KEY="$CPP_KEY CPP_EARTH"
345	fi
346	# set physics common utilities path
347	PHY_COMMON_PATH="${LIBFGCM}/phy_common"
348	# set the dyn/phys interface path
349	DYN_PHYS_PATH="${LIBFGCM}/dynphy_lonlat"
350	DYN_PHYS_SUB_PATH="${LIBFGCM}/dynphy_lonlat/phy${phys_root}"
351	fi
352
353	if [[ "$filtre" == "filtrez" ]]
354	then
355	FILTRE_PATH=${LIBFGCM}/$filtre
356	fi
357
358	if [[ "$chimie" == "INCA" ]]
359	then
360	CPP_KEY="$CPP_KEY INCA"
361	INCLUDE="$INCLUDE -I${INCA_INCDIR}"
362	LIB="$LIB -L${INCA_LIBDIR} -lchimie"
363	fi
364
365	if [[ "$isotopes" == "true" ]]
366	then
367	CPP_KEY="$CPP_KEY ISO"
368	fi
369
370	if [[ "$isoverif" == "true" ]]
371	then
372	CPP_KEY="$CPP_KEY ISOVERIF"
373	fi
374
375	if [[ "$diagiso" == "true" ]]
376	then
377	CPP_KEY="$CPP_KEY DIAGISO"
378	fi
379
380	if [[ "$isotrac" == "true" ]]
381	then
382	CPP_KEY="$CPP_KEY ISOTRAC"
383	fi
384
385	if [[ "$couple" != "false" ]]
386	then
387	if [[ "$couple" == "MPI1" ]]
388	then
389	CPP_KEY="$CPP_KEY CPP_COUPLE"
390	export OASIS_INCDIR=$LMDGCM/../../prism/X64/build/lib/psmile.MPI1
391	export OASIS_LIBDIR=$LMDGCM/../../prism/X64/lib
392	INCLUDE="$INCLUDE -I${OASIS_INCDIR}"
393	LIB="$LIB -L${OASIS_LIBDIR} -lpsmile.MPI1 -lmpp_io"
394	else
395	CPP_KEY="$CPP_KEY CPP_COUPLE CPP_OMCT"
396	INCLUDE="$INCLUDE -I${OASIS_INCDIR}"
397	LIB="$LIB -L${OASIS_LIBDIR} -lpsmile.MPI1 -lscrip -lmct -lmpeu"
398	fi
399	fi
400
401	if [[ "$parallel" == "mpi" ]]
402	then
403	CPP_KEY="$CPP_KEY CPP_PARA CPP_MPI"
404	PARA_FFLAGS="%MPI_FFLAGS"
405	PARA_LD="%MPI_LD"
406	elif [[ "$parallel" == "omp" ]]
407	then
408	CPP_KEY="$CPP_KEY CPP_PARA CPP_OMP"
409	PARA_FFLAGS="%OMP_FFLAGS"
410	PARA_LD="%OMP_LD"
411	elif [[ "$parallel" == "mpi_omp" ]]
412	then
413	CPP_KEY="$CPP_KEY CPP_PARA CPP_MPI CPP_OMP"
414	PARA_FFLAGS="%MPI_FFLAGS %OMP_FFLAGS"
415	PARA_LD="%MPI_LD %OMP_LD"
416	fi
417
418	if [[ ( "$parallel" == "omp" \|\| "$parallel" == "mpi_omp" ) \
419	&& "$compil_mod" == "debug" ]]
420	then
421	echo "Usually, parallelization with OpenMP requires some optimization."
422	echo "We suggest switching to \"-dev\"."
423	fi
424
425	if [ "$veget" = "true" -o "$veget" = "orchidee1.9" -o "$veget" = "orchidee2.0" -o "$veget" = "orchidee2.1" ]
426	then
427	#NB: option 'true': for backward compatibility. To be used with ORCHIDEE tag 1.9-1.9.6
428	# For this case, cpp flag ORCHIDEE_NOOPENMP must be added to the makelmdz_fcm arguments
429	# option orchidee1.9 : Compile with ORCHIDEE version up to the inclusion of OpenMP in ORCHIDEE : tag 1.9-1.9.5(version AR5)-1.9.6
430	INCLUDE="${INCLUDE} -I${ORCH_INCDIR}"
431	CPP_KEY="$CPP_KEY CPP_VEGET"
432	# temporary, for Orchidee versions 1.9.* (before openmp activation)
433	if [[ "$veget" == "orchidee1.9" ]] ; then
434	CPP_KEY="$CPP_KEY ORCHIDEE_NOOPENMP"
435	fi
436	if [[ "$veget" == "orchidee2.0" ]] ; then
437	orch_libs="sechiba parameters stomate parallel orglob orchidee"
438	CPP_KEY="$CPP_KEY ORCHIDEE_NOUNSTRUCT"
439	elif [[ "$veget" == "orchidee2.1" ]] ; then
440	orch_libs="sechiba parameters stomate parallel orglob orchidee"
441	else
442	orch_libs="sechiba parameters stomate parallel orglob"
443	fi
444	LIB="${LIB} -L${ORCH_LIBDIR}"
445	for lib in ${orch_libs} ; do
446	if [ -f ${ORCH_LIBDIR}/lib${LIBPREFIX}$lib.a ] ; then
447	LIB="${LIB} -l${LIBPREFIX}$lib "
448	fi
449	done
450	elif [[ "$veget" != "false" ]] ; then
451	echo "Option -v $veget does not exist"
452	echo "Use ./makelmdz_fcm -h for more information"
453	exit
454	fi
455
456	if [[ "$inlandsis" == "true" ]]
457	then
458	CPP_KEY="$CPP_KEY CPP_INLANDSIS"
459	INLANDSIS_PATH="$LIBFGCM/%PHYS/inlandsis"
460	fi
461
462
463	if [[ "$rad" == "rrtm" ]]
464	then
465	CPP_KEY="$CPP_KEY CPP_RRTM"
466	RAD_PATH="$LIBFGCM/%PHYS/rrtm"
467	fi
468	if [[ "$rad" == "ecrad" ]]
469	then
470	CPP_KEY="$CPP_KEY CPP_ECRAD"
471	RAD_PATH="$LIBFGCM/%PHYS/ecrad"
472	fi
473
474	if [[ "$dust" == "true" ]]
475	then
476	CPP_KEY="$CPP_KEY CPP_Dust"
477	DUST_PATH="$LIBFGCM/%PHYS/Dust"
478	fi
479
480	if [[ "$strataer" == "true" ]]
481	then
482	CPP_KEY="$CPP_KEY CPP_StratAer"
483	STRATAER_PATH="$LIBFGCM/%PHYS/StratAer"
484	fi
485
486	if [[ $io == ioipsl ]]
487	then
488	CPP_KEY="$CPP_KEY CPP_IOIPSL"
489	INCLUDE="$INCLUDE -I${IOIPSL_INCDIR}"
490	LIB="$LIB -L${IOIPSL_LIBDIR} -l${LIBPREFIX}ioipsl"
491	elif [[ $io == mix ]]
492	then
493	# For now, xios implies also using ioipsl
494	CPP_KEY="$CPP_KEY CPP_IOIPSL CPP_XIOS"
495	INCLUDE="$INCLUDE -I${IOIPSL_INCDIR} -I${XIOS_INCDIR}"
496	LIB="$LIB -L${IOIPSL_LIBDIR} -l${LIBPREFIX}ioipsl -L${XIOS_LIBDIR} -l${LIBPREFIX}stdc++ -l${LIBPREFIX}xios -l${LIBPREFIX}stdc++"
497	elif [[ $io == xios ]]
498	then
499	# For now, xios implies also using ioipsl
500	CPP_KEY="$CPP_KEY CPP_IOIPSL CPP_XIOS CPP_IOIPSL_NO_OUTPUT"
501	INCLUDE="$INCLUDE -I${IOIPSL_INCDIR} -I${XIOS_INCDIR}"
502	LIB="$LIB -L${IOIPSL_LIBDIR} -l${LIBPREFIX}ioipsl -L${XIOS_LIBDIR} -l${LIBPREFIX}stdc++ -l${LIBPREFIX}xios -l${LIBPREFIX}stdc++"
503	fi
504
505	if [[ "$cosp" == "true" ]]
506	then
507	CPP_KEY="$CPP_KEY CPP_COSP"
508	COSP_PATH="$LIBFGCM/phylmd/cosp"
509	# LIB="${LIB} -l${LIBPREFIX}cosp"
510	fi
511
512	if [[ "$cosp2" == "true" ]]
513	then
514	CPP_KEY="$CPP_KEY CPP_COSP2"
515	COSP_PATH="$LIBFGCM/phylmd/cosp2"
516	# LIB="${LIB} -l${LIBPREFIX}cosp2"
517	fi
518
519	if [[ "$cospv2" == "true" ]]
520	then
521	CPP_KEY="$CPP_KEY CPP_COSPV2"
522	COSP_PATH="$LIBFGCM/phylmd/cospv2"
523	# LIB="${LIB} -l${LIBPREFIX}cosp2"
524	fi
525
526
527
528	INCLUDE="$INCLUDE ${NETCDF_INCDIR}"
529	LIB="$LIB ${NETCDF_LIBDIR}"
530
531	########################################################################
532	# calcul du nombre de dimensions
533	########################################################################
534
535
536	dim_full=$dim
537	dim=`echo $dim \| sed -e 's/[^0-9]/ /g'`
538	set $dim
539	dimc=$#
540	echo calcul de la dimension
541	echo dim $dim
542	echo dimc $dimc
543
544
545	########################################################################
546	# Gestion des dimensions du modele.
547	# on cree ou remplace le fichier des dimensions
548	########################################################################
549
550	cd $LIBFGCM/grid
551	if [[ -f dimensions.h ]]
552	then
553	echo 'ATTENTION: vous etes sans doute en train de compiler le modele par ailleurs'
554	echo "Attendez que la premiere compilation soit terminee pour relancer la suivante."
555	echo "Si vous etes sur que vous ne compilez pas le modele par ailleurs,"
556	echo vous pouvez continuer en repondant oui.
557	echo "Voulez-vous vraiment continuer?"
558	echo ""
559	echo "WARNING: you are probably already compiling the model somewhere else."
560	echo "Wait until the first compilation is finished before launching this one."
561	echo "If you are sure that you are not compiling elsewhere, just answer "
562	echo "yes (or 'oui') to the question below to proceed."
563	echo "Do you wish to continue?"
564	read reponse
565	if [[ $reponse == "oui" \|\| $reponse == "yes" ]]
566	then
567	\rm -f $LIBFGCM/grid/dimensions.h
568	else
569	exit
570	fi
571	fi
572
573
574	cd $LIBFGCM/grid/dimension
575	./makdim $dim
576	cat $LIBFGCM/grid/dimensions.h
577	cd $LMDGCM
578
579
580	########################################################################
581	# Differentes dynamiques (3d, 2d, 1d)
582	########################################################################
583
584	dimension=`echo $dim \| wc -w`
585	echo dimension $dimension
586
587	if (( $dimension == 3 ))
588	then
589	cd $LIBFGCM/grid
590	\rm fxyprim.h
591	cp -p fxy_${grille}.h fxyprim.h
592	#else
593	# echo "Probleme dans les dimensions de la dynamique !!"
594	# echo "Non reactive pour l'instant !!!"
595	fi
596
597	if (( $dimension == 1 ))
598	then
599	CPP_KEY="$CPP_KEY CPP_1D"
600	##in 1D, add dyn3d to include path (because main prog is in physics)
601	INCLUDE="$INCLUDE -Ilibf/dyn3d -Ilibf/dyn3d_common"
602	## no filtre in 1d:
603	FILTRE_PATH=$LMDGCM/.void_dir
604	## no need to compile all routines in dyn3d_common either:
605	DYN_COMMON_PATH=$LMDGCM/.void_dir
606	## no need to compile all routines in dynlmdz_phy... ;
607	## (because key ones are included in 1D main program)
608	DYN_PHYS_PATH=$LMDGCM/.void_dir
609	DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir
610	fi
611
612	######################################################################
613	# Traitement special pour le nouveau rayonnement de Laurent Li.
614	# ---> YM desactive pour le traitemement en parallele
615	######################################################################
616
617	#if [[ -f $libf/phy$physique/raddim.h ]]
618	#then
619	# if [[ -f $libf/phy$physique/raddim.$dimh.h ]]
620	#then
621	# \rm -f $libf/phy$physique/raddim.h
622	# cp -p $libf/phy$physique/raddim.$dimh.h $libf/phy$physique/raddim.h
623	# echo $libf/phy$physique/raddim.$dimh.h
624	# cat $libf/phy$physique/raddim.h
625	# else
626	# echo On peut diminuer la taille de l executable en creant
627	# echo le fichier $libf/phy$physique/raddim.$dimh.h
628	# \cp -p $libf/phy$physique/raddim.defaut.h $libf/phy$physique/raddim.h
629	# fi
630	#fi
631
632	######################################################################
633	# Gestion du filtre qui n'existe qu'en 3d.
634	######################################################################
635
636	if (( `expr $dimc \> 2` == 1 ))
637	then
638	filtre="FILTRE=$filtre"
639	else
640	filtre="FILTRE= L_FILTRE= "
641	fi
642	echo MACRO FILTRE $filtre
643
644	echo $dimc
645
646
647
648	######################################################################
649	# Creation du suffixe de la configuration
650	######################################################################
651
652
653	SUFF_NAME=_${dim_full}
654	SUFF_NAME=${SUFF_NAME}_phy${physique}
655
656	if [[ "$parallel" != "none" ]]
657	then
658	SUFF_NAME=${SUFF_NAME}_para
659	DYN=dyn${dimc}d${paramem}
660	if [[ "$paramem" == "mem" ]]
661	then
662	SUFF_NAME=${SUFF_NAME}_${paramem}
663	else
664	echo "The version of the dynamics in dyn3dpar is no longer updated."
665	echo "You should use option \"-mem\"."
666	exit 1
667	fi
668	else
669	SUFF_NAME=${SUFF_NAME}_seq
670	if (( $dimension == 1 ))
671	then
672	# dynamics-related routines in"dyn1d" subdirectory of phy${physique}
673	DYN=phy${physique}/dyn1d
674	else
675	DYN=dyn${dimc}d
676	fi
677	fi
678
679	if [[ $veget != "false" ]]
680	then
681	SUFF_NAME=${SUFF_NAME}_orch
682	fi
683
684	if [[ $dust == "true" ]]
685	then
686	SUFF_NAME=${SUFF_NAME}_spla
687	fi
688
689	if [[ $couple != "false" ]]
690	then
691	SUFF_NAME=${SUFF_NAME}_couple
692	fi
693
694	if [[ $chimie == "INCA" ]]
695	then
696	SUFF_NAME=${SUFF_NAME}_inca
697	fi
698
699	if [[ "$isotopes" == "true" ]]
700	then
701	SUFF_NAME=${SUFF_NAME}_iso
702	fi
703	if [[ "$isoverif" == "true" ]]
704	then
705	SUFF_NAME=${SUFF_NAME}_isoverif
706	fi
707	if [[ "$isotrac" == "true" ]]
708	then
709	SUFF_NAME=${SUFF_NAME}_isotrac
710	fi
711	if [[ "$diagiso" == "true" ]]
712	then
713	SUFF_NAME=${SUFF_NAME}_diagiso
714	fi
715
716	if [[ $libphy == "true" ]]
717	then
718	# special case where we compile only the physics
719	DYN=$LMDGCM/.void_dir
720	DYN_COMMON_PATH=$LMDGCM/.void_dir
721	FILTRE_PATH=$LMDGCM/.void_dir
722	DYN_PHYS_PATH=$LMDGCM/.void_dir
723	DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir
724	#and there is no main program to generate
725	code=""
726	SUFF_NAME=""
727	else
728	SUFF_NAME=${SUFF_NAME}.e
729	fi
730
731	cd $LMDGCM
732	config_fcm="config.fcm"
733	rm -f $config_fcm
734	touch $config_fcm
735	rm -f bin/${code}${SUFF_NAME}.e
736	rm -f arch.fcm
737	rm -f arch.opt
738
739	echo "%ARCH $arch" >> $config_fcm
740	echo "%INCDIR $INCLUDE" >> $config_fcm
741	echo "%LIB $LIB" >> $config_fcm
742	echo "%ROOT_PATH $PWD" >> $config_fcm
743	echo "%LIBF $LIBFGCM" >> $config_fcm
744	echo "%LIBO $LIBOGCM" >> $config_fcm
745	echo "%DYN $DYN" >> $config_fcm
746	echo "%DYN_COMMON $DYN_COMMON_PATH" >> $config_fcm
747	echo "%PHY_COMMON $PHY_COMMON_PATH" >> $config_fcm
748	echo "%FILTRE $FILTRE_PATH" >> $config_fcm
749	echo "%PHYS phy${physique}" >> $config_fcm
750	echo "%DYN_PHYS $DYN_PHYS_PATH" >> $config_fcm
751	echo "%DYN_PHYS_SUB $DYN_PHYS_SUB_PATH" >> $config_fcm
752	echo "%RAD $RAD_PATH" >> $config_fcm
753	echo "%DUST $DUST_PATH" >> $config_fcm
754	echo "%STRATAER $STRATAER_PATH" >> $config_fcm
755	echo "%INLANDSIS $INLANDSIS_PATH" >> $config_fcm
756	echo "%COSP $COSP_PATH" >> $config_fcm
757	echo "%CPP_KEY $CPP_KEY" >> $config_fcm
758	echo "%EXEC $code" >> $config_fcm
759	echo "%SUFF_NAME $SUFF_NAME" >> $config_fcm
760	echo "%COMPIL_FFLAGS $COMPIL_FFLAGS" >> $config_fcm
761	echo "%PARA_FFLAGS $PARA_FFLAGS" >> $config_fcm
762	echo "%PARA_LD $PARA_LD" >> $config_fcm
763	echo "%EXT_SRC $EXT_SRC" >> $config_fcm
764
765
766
767	ln -s arch/arch-${arch}.fcm arch.fcm
768	if test -f arch/arch-${arch}.opt && [ $compil_mod = "prod" ]
769	then
770	ln -s arch/arch-${arch}.opt arch.opt
771	else
772	ln -s .void_file arch.opt
773	fi
774
775	rm -f $LIBOGCM/${arch}${SUFF_NAME}/.config/fcm.bld.lock
776	./build_gcm ${fcm_path} -j $job $full
777
778	err=$?
779	# Check error message from fcm build
780	if [ $err != 0 ] ; then
781	exit 1
782	fi
783
784	rm -rf tmp_src
785	rm -rf config
786	ln -s $LIBOGCM/${arch}${SUFF_NAME}/.config config
787	ln -s $LIBOGCM/${arch}${SUFF_NAME}/.config/ppsrc tmp_src
788
789
790	if [[ -r $LIBFGCM/grid/dimensions.h ]]
791	then
792	# Cleanup: remove dimension.h file
793	\rm -f $LIBFGCM/grid/dimensions.h
794	fi

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