[1279] | 1 | #!/bin/bash |
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| 2 | # $Id: makelmdz_fcm 5306 2024-10-30 18:30:12Z fairhead $ |
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| 3 | # This is a script in Bash. |
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| 4 | |
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[2098] | 5 | # FH : on ne cr\'ee plus le fichier arch.mk qui est suppos\'e exister par |
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[783] | 6 | # FH : ailleurs. |
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[2098] | 7 | # FH : ulterieurement, ce fichier sera pr\'e-existant pour une s\'erie |
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| 8 | # FH : de configurations en versions optimis\'ees et debug qui seront |
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| 9 | # FH : li\'es (ln -s) avec arch.mk en fonction de l'architecture. |
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| 10 | # FH : Pour le moment, cette version est en test et on peut cr\'eer les |
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| 11 | # FH : arch.mk en lan\c{}cant une premi\`ere fois makegcm. |
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[783] | 12 | # |
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[1279] | 13 | ##set -x |
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[2202] | 14 | set -e |
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[783] | 15 | ######################################################################## |
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| 16 | # options par defaut pour la commande make |
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| 17 | ######################################################################## |
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| 18 | |
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[1279] | 19 | dim="96x72x19" |
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| 20 | physique=lmd |
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| 21 | filtre=filtrez |
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| 22 | couple=false |
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| 23 | veget=false |
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[3793] | 24 | inlandsis=false |
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[1990] | 25 | rrtm=false |
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[4195] | 26 | rad="oldrad" |
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[2631] | 27 | dust=false |
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[2690] | 28 | strataer=false |
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[1279] | 29 | chimie=false |
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| 30 | parallel=none |
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[3997] | 31 | paramem="mem" |
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[1279] | 32 | compil_mod=prod |
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| 33 | io=ioipsl |
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| 34 | LIBPREFIX="" |
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| 35 | cosp=false |
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[3358] | 36 | cosp2=false |
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[3491] | 37 | cospv2=false |
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[1802] | 38 | job=1 |
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| 39 | full='' |
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[2358] | 40 | libphy=false |
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[3924] | 41 | isotopes=false |
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| 42 | isoverif=false |
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| 43 | diagiso=false |
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| 44 | isotrac=false |
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[4096] | 45 | force_compile=false |
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[4247] | 46 | cplocninca=false |
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[783] | 47 | |
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[2743] | 48 | arch_defined="FALSE" |
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| 49 | arch_path="arch" |
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| 50 | arch_default_path="arch" |
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| 51 | |
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[1279] | 52 | LMDGCM=`/bin/pwd` |
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| 53 | LIBOGCM=$LMDGCM/libo |
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| 54 | LIBFGCM=$LMDGCM/libf |
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[2239] | 55 | DYN_COMMON_PATH=$LIBFGCM/dyn3d_common |
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[2084] | 56 | # path for optional packages, but default set to ".void_dir" |
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[2239] | 57 | FILTRE_PATH=$LMDGCM/.void_dir |
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| 58 | DYN_PHYS_PATH=$LMDGCM/.void_dir |
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[2242] | 59 | DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir |
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[2326] | 60 | PHY_COMMON_PATH=$LMDGCM/.void_dir |
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[3908] | 61 | RAD_PATH=$LMDGCM/.void_dir |
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[3901] | 62 | INLANDSIS_PATH=$LMDGCM/.void_dir |
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[2631] | 63 | DUST_PATH=$LMDGCM/.void_dir |
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[2690] | 64 | STRATAER_PATH=$LMDGCM/.void_dir |
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[1327] | 65 | COSP_PATH=$LMDGCM/.void_dir |
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[1578] | 66 | fcm_path=$LMDGCM/tools/fcm/bin |
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[783] | 67 | |
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| 68 | ######################################################################## |
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| 69 | # Quelques initialisations de variables du shell. |
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| 70 | ######################################################################## |
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| 71 | |
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[3815] | 72 | CPP_KEY="IN_LMDZ" |
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[1279] | 73 | INCLUDE="" |
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| 74 | LIB="" |
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| 75 | adjnt="" |
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| 76 | COMPIL_FFLAGS="%PROD_FFLAGS" |
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| 77 | PARA_FFLAGS="" |
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| 78 | PARA_LD="" |
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| 79 | EXT_SRC="" |
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[783] | 80 | |
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| 81 | ######################################################################## |
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| 82 | # lecture des options de mymake |
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| 83 | ######################################################################## |
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| 84 | |
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[1279] | 85 | while (($# > 0)) |
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| 86 | do |
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| 87 | case $1 in |
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| 88 | "-h") cat <<fin |
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[783] | 89 | Usage : |
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[1772] | 90 | makelmdz_fcm [options] -arch nom_arch exec |
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| 91 | [-h] : brief help |
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| 92 | [-d [[IMx]JMx]LM] : IM, JM, LM are the dimensions in x, y, z (default: $dim) |
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| 93 | [-p PHYS] : set of physical parametrizations (in libf/phyPHYS), (default: lmd) |
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| 94 | [-prod / -dev / -debug] : compilation mode production (default) / developement / debug |
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[1965] | 95 | [-c false/MPI1/OMCT] : coupling with ocean model : MPI1/OMCT/false (default: false) |
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[4283] | 96 | [-v false/orchideetrunk/orchidee2.1/orchidee2.0/orchidee1.9] : version of the vegetation model to include (default: false) |
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[1772] | 97 | false : no vegetation model |
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[4283] | 98 | orchideetrunk : compile using ORCHIDEE trunk from revision 7757 or higher |
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| 99 | orchidee2.1 : compile using ORCHIDEE 2.1 until 4.1 included or until revision 7757 on the trunk |
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[3435] | 100 | orchidee2.0 : compile using ORCHIDEE 2.0 |
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[1772] | 101 | orchidee1.9 : compile using ORCHIDEE up to the version including OpenMP in ORCHIDEE : tag 1.9-1.9.5(version AR5)-1.9.6 |
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| 102 | true : (obsolete; for backward compatibility) use ORCHIDEE tag 1.9-1.9.6 |
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| 103 | [-chimie INCA/false] : with INCA chemistry model or without (default: false) |
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[4247] | 104 | [-cplocninca ] : allow transfer of species from PISCES to INCA (default: false) |
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[2238] | 105 | [-cosp true/false] : compile with/without cosp package (default: false) |
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[3358] | 106 | [-cosp2 true/false] : compile with/without cosp2 package (default: false) |
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[3491] | 107 | [-cospv2 true/false] : compile with/without cospv2 package (default: false) |
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[3793] | 108 | [-inlandsis true/false] : compile with/without inlandsis package (default: false) |
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[2238] | 109 | [-rrtm true/false] : compile with/without rrtm package (default: false) |
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[4195] | 110 | [-rad oldrad/rrtm/ecrad] : compile with oldrad/rrtm/ecrad radiatif code (default: oldrad) |
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[2631] | 111 | [-dust true/false] : compile with/without the dust package by Boucher and co (default: false) |
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[2690] | 112 | [-strataer true/false] : compile with/without the strat aer package by Boucher and co (default: false) |
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[3924] | 113 | [-isotopes true/false] : compile with/without water isotopes in the physics |
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| 114 | [-isoverif true/false] : compile with/without verifications for water isotopes in the physics |
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| 115 | [-diagiso true/false] : compile with/without special diagnostics for water isotopes in the physics |
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| 116 | [-isotrac true/false] : compile with/without tracers of water isotopes in the physics |
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[1772] | 117 | [-parallel none/mpi/omp/mpi_omp] : parallelism (default: none) : mpi, openmp or mixted mpi_openmp |
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[2097] | 118 | [-io ioipsl/mix/xios] : Input/Output library (default: ioipsl) |
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[1772] | 119 | [-include INCLUDES] : extra include path to add |
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| 120 | [-cpp CPP_KEY] : additional preprocessing definitions |
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| 121 | [-adjnt] : adjoint model, not operational ... |
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[3997] | 122 | [-mem] : reduced memory dynamics (obsolete flag; always on in parallel mode) |
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[1772] | 123 | [-filtre NOMFILTRE] : use filtre from libf/NOMFILTRE (default: filtrez) |
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| 124 | [-link LINKS] : additional links with other libraries |
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[1802] | 125 | [-j n] : active parallel compiling on ntask |
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| 126 | [-full] : full recompiling |
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[2358] | 127 | [-libphy] : only compile physics package (no dynamics or main program) |
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[1772] | 128 | [-fcm_path path] : path to the fcm tool (default: tools/fcm/bin) |
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| 129 | [-ext_src path] : path to an additional set of routines to compile with the model |
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[2743] | 130 | [-arch_path path] : path to architecture files (default: $arch_default_path) |
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[4096] | 131 | [-force_compile] : recompile although there seems to be an on-going compilation |
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[1772] | 132 | -arch nom_arch : target architecture |
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| 133 | exec : executable to build |
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[783] | 134 | fin |
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[1279] | 135 | exit;; |
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[783] | 136 | |
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[1279] | 137 | "-d") |
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| 138 | dim=$2 ; shift ; shift ;; |
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| 139 | |
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| 140 | "-p") |
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| 141 | physique="$2" ; shift ; shift ;; |
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[783] | 142 | |
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[1279] | 143 | "-c") |
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| 144 | couple="$2" ; shift ; shift ;; |
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[783] | 145 | |
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[1279] | 146 | "-prod") |
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| 147 | compil_mod="prod" ; shift ;; |
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[1002] | 148 | |
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[1279] | 149 | "-dev") |
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| 150 | compil_mod="dev" ; shift ;; |
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[1002] | 151 | |
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[1279] | 152 | "-debug") |
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| 153 | compil_mod="debug" ; shift ;; |
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[1002] | 154 | |
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[1279] | 155 | "-io") |
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| 156 | io="$2" ; shift ; shift ;; |
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[783] | 157 | |
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[1279] | 158 | "-v") |
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| 159 | veget="$2" ; shift ; shift ;; |
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[783] | 160 | |
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[3793] | 161 | "-inlandsis") |
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[3908] | 162 | inlandsis="$2" ; shift ; shift ;; |
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[3793] | 163 | |
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[1990] | 164 | "-rrtm") |
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[4195] | 165 | rrtm="$2" ; if [ "$2" = "false" ] ; then rad="oldrad" ; else rad="rrtm" ; fi ; shift ; shift ;; |
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[1990] | 166 | |
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[3908] | 167 | "-rad") |
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| 168 | rad="$2" ; shift ; shift ;; |
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| 169 | |
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[2631] | 170 | "-dust") |
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| 171 | dust="$2" ; shift ; shift ;; |
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| 172 | |
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[2690] | 173 | "-strataer") |
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| 174 | strataer="$2" ; shift ; shift ;; |
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| 175 | |
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[1279] | 176 | "-chimie") |
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| 177 | chimie="$2" ; shift ; shift ;; |
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[783] | 178 | |
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[4247] | 179 | "-cplocninca") |
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| 180 | cplocninca=TRUE ; shift ;; |
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| 181 | |
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[3924] | 182 | "-isotopes") |
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| 183 | isotopes="$2" ; shift ; shift ;; |
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| 184 | |
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| 185 | "-isoverif") |
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| 186 | isoverif="$2" ; shift ; shift ;; |
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| 187 | |
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| 188 | "-diagiso") |
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| 189 | diagiso="$2" ; shift ; shift ;; |
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| 190 | |
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| 191 | "-isotrac") |
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| 192 | isotrac="$2" ; shift ; shift ;; |
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| 193 | |
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[1279] | 194 | "-parallel") |
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| 195 | parallel="$2" ; shift ; shift ;; |
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| 196 | |
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| 197 | "-include") |
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| 198 | INCLUDE="$INCLUDE -I$2" ; shift ; shift ;; |
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[783] | 199 | |
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[1279] | 200 | "-cpp") |
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| 201 | CPP_KEY="$CPP_KEY $2" ; shift ; shift ;; |
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[1132] | 202 | |
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[1279] | 203 | "-adjnt") |
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[1772] | 204 | echo "not operational ... work to be done here ";exit |
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[1279] | 205 | opt_dep="$opt_dep adjnt" ; adjnt="-ladjnt -ldyn3d " |
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| 206 | optim="$optim -Dadj" ; shift ;; |
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[783] | 207 | |
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[1279] | 208 | "-cosp") |
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| 209 | cosp="$2" ; shift ; shift ;; |
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[3358] | 210 | |
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| 211 | "-cosp2") |
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| 212 | cosp2="$2" ; shift ; shift ;; |
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[3491] | 213 | |
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| 214 | "-cospv2") |
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| 215 | cospv2="$2" ; shift ; shift ;; |
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[1680] | 216 | |
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| 217 | "-mem") |
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[3997] | 218 | echo "option -mem is obsolete (now always on in parallel)" |
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[1680] | 219 | paramem="mem" ; shift ;; |
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[783] | 220 | |
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[1279] | 221 | "-filtre") |
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| 222 | filtre=$2 ; shift ; shift ;; |
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[783] | 223 | |
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[1279] | 224 | "-link") |
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| 225 | LIB="$LIB $2" ; shift ; shift ;; |
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[1136] | 226 | |
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[1279] | 227 | "-fcm_path") |
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| 228 | fcm_path=$2 ; shift ; shift ;; |
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[783] | 229 | |
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[1279] | 230 | "-ext_src") |
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| 231 | EXT_SRC=$2 ; shift ; shift ;; |
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[2358] | 232 | |
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[1802] | 233 | "-j") |
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| 234 | job=$2 ; shift ; shift ;; |
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[2358] | 235 | |
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[1802] | 236 | "-full") |
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| 237 | full="-full" ; shift ;; |
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[783] | 238 | |
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[2358] | 239 | "-libphy") |
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| 240 | libphy="true" ; shift ;; |
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| 241 | |
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[1279] | 242 | "-arch") |
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[2743] | 243 | arch=$2 ; arch_defined="TRUE" ; shift ; shift ;; |
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[783] | 244 | |
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[2743] | 245 | "-arch_path") |
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| 246 | arch_path=$2 ; arch_path_defined="TRUE"; shift ; shift ;; |
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| 247 | |
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[4096] | 248 | "-force_compile") |
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| 249 | force_compile=true ; shift ;; |
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| 250 | |
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[1279] | 251 | *) |
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| 252 | code="$1" ; shift ;; |
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| 253 | esac |
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| 254 | done |
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| 255 | |
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[1136] | 256 | ############################################################### |
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[1755] | 257 | # path to fcm |
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[1136] | 258 | ############################################################### |
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[1755] | 259 | # handle case when provided path to fcm was given as a relative |
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| 260 | # path (from makelmdz_fcm script directory) and not an absolute path |
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| 261 | if [[ ${fcm_path:0:1} != "/" ]] ; then |
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| 262 | # prepend with makelmdz_fcm location |
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| 263 | fcm_path=$(cd $(dirname $0) ; pwd)"/"${fcm_path} |
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| 264 | fi |
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[783] | 265 | |
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[1757] | 266 | # add fcm_path to PATH |
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| 267 | export PATH=${fcm_path}:${PATH} |
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| 268 | |
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[1755] | 269 | echo "Path to fcm:" |
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| 270 | echo ${fcm_path} |
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[1136] | 271 | |
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[783] | 272 | ############################################################### |
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[2098] | 273 | # lecture des chemins propres \`a l'architecture de la machine # |
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[783] | 274 | ############################################################### |
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[1279] | 275 | rm -f .void_file |
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| 276 | echo > .void_file |
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[1327] | 277 | rm -rf .void_dir |
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| 278 | mkdir .void_dir |
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[783] | 279 | |
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[2743] | 280 | if [[ "$arch_defined" == "TRUE" ]] |
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| 281 | then |
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| 282 | rm -f arch.path |
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| 283 | rm -f arch.fcm |
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| 284 | rm -f arch.env |
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| 285 | |
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| 286 | if test -f $arch_path/arch-${arch}.path |
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| 287 | then |
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| 288 | ln -s $arch_path/arch-${arch}.path arch.path |
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| 289 | elif test -f $arch_default_path/arch-${arch}.path |
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| 290 | then |
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| 291 | ln -s $arch_default_path/arch-${arch}.path arch.path |
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| 292 | fi |
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| 293 | |
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| 294 | if test -f $arch_path/arch-${arch}.fcm |
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| 295 | then |
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| 296 | ln -s $arch_path/arch-${arch}.fcm arch.fcm |
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| 297 | elif test -f $arch_default_path/arch-${arch}.fcm |
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| 298 | then |
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| 299 | ln -s $arch_default_path/arch-${arch}.fcm arch.fcm |
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| 300 | fi |
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| 301 | |
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| 302 | if test -f $arch_path/arch-${arch}.env |
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| 303 | then |
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| 304 | ln -s $arch_path/arch-${arch}.env arch.env |
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| 305 | elif test -f $arch_default_path/arch-${arch}.env |
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| 306 | then |
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| 307 | ln -s $arch_default_path/arch-${arch}.env arch.env |
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| 308 | else |
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| 309 | ln -s .void_file arch.env |
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| 310 | fi |
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| 311 | # source architecture PATH and ENV files |
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| 312 | source arch.env |
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| 313 | source arch.path |
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| 314 | else |
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| 315 | echo "You must define a target architecture" |
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| 316 | exit 1 |
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| 317 | fi |
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| 318 | |
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[783] | 319 | ######################################################################## |
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| 320 | # Definition des clefs CPP, des chemins des includes et modules |
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| 321 | # et des libraries |
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| 322 | ######################################################################## |
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| 323 | |
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[1279] | 324 | if [[ "$compil_mod" == "prod" ]] |
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| 325 | then |
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| 326 | COMPIL_FFLAGS="%PROD_FFLAGS" |
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| 327 | elif [[ "$compil_mod" == "dev" ]] |
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| 328 | then |
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| 329 | COMPIL_FFLAGS="%DEV_FFLAGS" |
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| 330 | elif [[ "$compil_mod" == "debug" ]] |
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| 331 | then |
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| 332 | COMPIL_FFLAGS="%DEBUG_FFLAGS" |
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| 333 | fi |
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[783] | 334 | |
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[2250] | 335 | phys_root=$physique |
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| 336 | if [[ "${physique:0:3}" == "lmd" ]] ; then phys_root=lmd ; fi |
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| 337 | if [[ "${physique:0:4}" == "mars" ]] ; then phys_root=mars ; fi |
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| 338 | if [[ "${physique:0:3}" == "std" ]] ; then phys_root=std ; fi |
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| 339 | if [[ "${physique:0:5}" == "venus" ]] ; then phys_root=venus ; fi |
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| 340 | if [[ "${physique:0:5}" == "titan" ]] ; then phys_root=titan ; fi |
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| 341 | if [[ "${physique:0:3}" == "dev" ]] ; then phys_root=dev ; fi |
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| 342 | |
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[1279] | 343 | if [[ "$physique" != "nophys" ]] |
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| 344 | then |
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[1615] | 345 | #We'll use some physics |
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| 346 | CPP_KEY="$CPP_KEY CPP_PHYS" |
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[2250] | 347 | if [[ "${phys_root}" == "lmd" ]] |
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[1615] | 348 | then |
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| 349 | #For lmd physics, default planet type is Earth |
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[1279] | 350 | CPP_KEY="$CPP_KEY CPP_EARTH" |
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[1615] | 351 | fi |
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[2326] | 352 | # set physics common utilities path |
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| 353 | PHY_COMMON_PATH="${LIBFGCM}/phy_common" |
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[2239] | 354 | # set the dyn/phys interface path |
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[2417] | 355 | DYN_PHYS_PATH="${LIBFGCM}/dynphy_lonlat" |
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| 356 | DYN_PHYS_SUB_PATH="${LIBFGCM}/dynphy_lonlat/phy${phys_root}" |
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[1279] | 357 | fi |
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[783] | 358 | |
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[2239] | 359 | if [[ "$filtre" == "filtrez" ]] |
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| 360 | then |
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| 361 | FILTRE_PATH=${LIBFGCM}/$filtre |
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| 362 | fi |
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| 363 | |
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[1279] | 364 | if [[ "$chimie" == "INCA" ]] |
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| 365 | then |
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| 366 | CPP_KEY="$CPP_KEY INCA" |
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[4426] | 367 | INCLUDE="$INCLUDE ${INCA_INCDIR}" |
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| 368 | LIB="$LIB ${INCA_LIBDIR} ${INCA_LIB}" |
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[1279] | 369 | fi |
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[783] | 370 | |
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[3924] | 371 | if [[ "$isotopes" == "true" ]] |
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| 372 | then |
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| 373 | CPP_KEY="$CPP_KEY ISO" |
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| 374 | fi |
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| 375 | |
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| 376 | if [[ "$isoverif" == "true" ]] |
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| 377 | then |
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| 378 | CPP_KEY="$CPP_KEY ISOVERIF" |
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| 379 | fi |
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| 380 | |
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| 381 | if [[ "$diagiso" == "true" ]] |
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| 382 | then |
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| 383 | CPP_KEY="$CPP_KEY DIAGISO" |
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| 384 | fi |
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| 385 | |
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| 386 | if [[ "$isotrac" == "true" ]] |
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| 387 | then |
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| 388 | CPP_KEY="$CPP_KEY ISOTRAC" |
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| 389 | fi |
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| 390 | |
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[1279] | 391 | if [[ "$couple" != "false" ]] |
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| 392 | then |
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[1965] | 393 | if [[ "$couple" == "MPI1" ]] |
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| 394 | then |
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| 395 | CPP_KEY="$CPP_KEY CPP_COUPLE" |
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| 396 | export OASIS_INCDIR=$LMDGCM/../../prism/X64/build/lib/psmile.MPI1 |
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| 397 | export OASIS_LIBDIR=$LMDGCM/../../prism/X64/lib |
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| 398 | INCLUDE="$INCLUDE -I${OASIS_INCDIR}" |
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| 399 | LIB="$LIB -L${OASIS_LIBDIR} -lpsmile.MPI1 -lmpp_io" |
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| 400 | else |
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| 401 | CPP_KEY="$CPP_KEY CPP_COUPLE CPP_OMCT" |
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[4426] | 402 | INCLUDE="$INCLUDE ${OASIS_INCDIR}" |
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| 403 | LIB="$LIB ${OASIS_LIBDIR} -lpsmile.MPI1 -lscrip -lmct -lmpeu" |
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[1965] | 404 | fi |
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[1279] | 405 | fi |
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[783] | 406 | |
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[1279] | 407 | if [[ "$parallel" == "mpi" ]] |
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| 408 | then |
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| 409 | CPP_KEY="$CPP_KEY CPP_PARA CPP_MPI" |
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| 410 | PARA_FFLAGS="%MPI_FFLAGS" |
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| 411 | PARA_LD="%MPI_LD" |
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| 412 | elif [[ "$parallel" == "omp" ]] |
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| 413 | then |
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| 414 | CPP_KEY="$CPP_KEY CPP_PARA CPP_OMP" |
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| 415 | PARA_FFLAGS="%OMP_FFLAGS" |
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| 416 | PARA_LD="%OMP_LD" |
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| 417 | elif [[ "$parallel" == "mpi_omp" ]] |
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| 418 | then |
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| 419 | CPP_KEY="$CPP_KEY CPP_PARA CPP_MPI CPP_OMP" |
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| 420 | PARA_FFLAGS="%MPI_FFLAGS %OMP_FFLAGS" |
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| 421 | PARA_LD="%MPI_LD %OMP_LD" |
---|
| 422 | fi |
---|
[783] | 423 | |
---|
[1279] | 424 | if [[ ( "$parallel" == "omp" || "$parallel" == "mpi_omp" ) \ |
---|
| 425 | && "$compil_mod" == "debug" ]] |
---|
| 426 | then |
---|
| 427 | echo "Usually, parallelization with OpenMP requires some optimization." |
---|
| 428 | echo "We suggest switching to \"-dev\"." |
---|
| 429 | fi |
---|
[783] | 430 | |
---|
[4283] | 431 | if [ "$veget" = "true" -o "$veget" = "orchidee1.9" -o "$veget" = "orchidee2.0" -o "$veget" = "orchidee2.1" -o "$veget" = "orchideetrunk" ] |
---|
[1279] | 432 | then |
---|
[4426] | 433 | echo "doing orchidee" |
---|
[1811] | 434 | #NB: option 'true': for backward compatibility. To be used with ORCHIDEE tag 1.9-1.9.6 |
---|
| 435 | # For this case, cpp flag ORCHIDEE_NOOPENMP must be added to the makelmdz_fcm arguments |
---|
| 436 | # option orchidee1.9 : Compile with ORCHIDEE version up to the inclusion of OpenMP in ORCHIDEE : tag 1.9-1.9.5(version AR5)-1.9.6 |
---|
[4426] | 437 | INCLUDE="${INCLUDE} ${ORCH_INCDIR}" |
---|
[1772] | 438 | CPP_KEY="$CPP_KEY CPP_VEGET" |
---|
[1811] | 439 | # temporary, for Orchidee versions 1.9.* (before openmp activation) |
---|
| 440 | if [[ "$veget" == "orchidee1.9" ]] ; then |
---|
| 441 | CPP_KEY="$CPP_KEY ORCHIDEE_NOOPENMP" |
---|
| 442 | fi |
---|
| 443 | if [[ "$veget" == "orchidee2.0" ]] ; then |
---|
[4426] | 444 | orch_libs="-lsechiba -lparameters -lstomate -lparallel -lorglob -lorchidee" |
---|
[3435] | 445 | CPP_KEY="$CPP_KEY ORCHIDEE_NOUNSTRUCT" |
---|
| 446 | elif [[ "$veget" == "orchidee2.1" ]] ; then |
---|
[4283] | 447 | CPP_KEY="$CPP_KEY ORCHIDEE_NOLIC" |
---|
[4426] | 448 | orch_libs="-lsechiba -lparameters -lstomate -lparallel -lorglob -lorchidee" |
---|
[4283] | 449 | elif [[ "$veget" == "orchideetrunk" ]] ; then |
---|
[4426] | 450 | orch_libs="-lorchidee" |
---|
[1811] | 451 | else |
---|
[4426] | 452 | orch_libs="-lsechiba -lparameters -lstomate -lparallel -lorglob" |
---|
[1811] | 453 | fi |
---|
[4426] | 454 | LIB="${LIB} ${ORCH_LIBDIR} ${orch_libs}" |
---|
| 455 | # for lib in ${orch_libs} ; do |
---|
| 456 | # if [ -f ${ORCH_LIBDIR#-L}/lib${LIBPREFIX}$lib.a ] ; then |
---|
| 457 | # LIB="${LIB} -l${LIBPREFIX}$lib " |
---|
| 458 | # fi |
---|
| 459 | # done |
---|
| 460 | echo "orchidee lib" |
---|
| 461 | echo ${LIB} |
---|
[1811] | 462 | elif [[ "$veget" != "false" ]] ; then |
---|
[1772] | 463 | echo "Option -v $veget does not exist" |
---|
| 464 | echo "Use ./makelmdz_fcm -h for more information" |
---|
| 465 | exit |
---|
[1279] | 466 | fi |
---|
[783] | 467 | |
---|
[5259] | 468 | INLANDSIS_PATH="$LIBFGCM/phy${physique}/inlandsis" |
---|
| 469 | if [[ "$inlandsis" == "true" ]]; then |
---|
[3793] | 470 | CPP_KEY="$CPP_KEY CPP_INLANDSIS" |
---|
| 471 | fi |
---|
| 472 | |
---|
[3908] | 473 | if [[ "$rad" == "rrtm" ]] |
---|
[1990] | 474 | then |
---|
| 475 | CPP_KEY="$CPP_KEY CPP_RRTM" |
---|
[5036] | 476 | RAD_PATH="$LIBFGCM/phy${physique}/rrtm" |
---|
[1990] | 477 | fi |
---|
[3908] | 478 | if [[ "$rad" == "ecrad" ]] |
---|
| 479 | then |
---|
| 480 | CPP_KEY="$CPP_KEY CPP_ECRAD" |
---|
[5036] | 481 | RAD_PATH="$LIBFGCM/phy${physique}/ecrad" |
---|
[3908] | 482 | fi |
---|
[1990] | 483 | |
---|
[5253] | 484 | DUST_PATH="$LIBFGCM/phy${physique}/Dust" |
---|
| 485 | if [[ "$dust" == "true" ]]; then |
---|
[2631] | 486 | CPP_KEY="$CPP_KEY CPP_Dust" |
---|
| 487 | fi |
---|
| 488 | |
---|
[5252] | 489 | STRATAER_PATH="$LIBFGCM/phy${physique}/StratAer" |
---|
| 490 | if [[ "$strataer" == "true" ]]; then |
---|
[2690] | 491 | CPP_KEY="$CPP_KEY CPP_StratAer" |
---|
| 492 | fi |
---|
| 493 | |
---|
[4489] | 494 | INCLUDE="$INCLUDE ${NETCDF95_INCDIR}" |
---|
| 495 | LIB="$LIB ${NETCDF95_LIBDIR} ${NETCDF95_LIB}" |
---|
| 496 | |
---|
[1279] | 497 | if [[ $io == ioipsl ]] |
---|
| 498 | then |
---|
| 499 | CPP_KEY="$CPP_KEY CPP_IOIPSL" |
---|
[4426] | 500 | INCLUDE="$INCLUDE ${IOIPSL_INCDIR}" |
---|
| 501 | LIB="$LIB ${IOIPSL_LIBDIR} ${IOIPSL_LIB}" |
---|
[2097] | 502 | elif [[ $io == mix ]] |
---|
[1897] | 503 | then |
---|
| 504 | # For now, xios implies also using ioipsl |
---|
| 505 | CPP_KEY="$CPP_KEY CPP_IOIPSL CPP_XIOS" |
---|
[4426] | 506 | INCLUDE="$INCLUDE ${IOIPSL_INCDIR} ${XIOS_INCDIR}" |
---|
| 507 | LIB="$LIB ${IOIPSL_LIBDIR} ${IOIPSL_LIB} ${XIOS_LIBDIR} ${XIOS_LIB}" |
---|
[2097] | 508 | elif [[ $io == xios ]] |
---|
| 509 | then |
---|
| 510 | # For now, xios implies also using ioipsl |
---|
| 511 | CPP_KEY="$CPP_KEY CPP_IOIPSL CPP_XIOS CPP_IOIPSL_NO_OUTPUT" |
---|
[4426] | 512 | INCLUDE="$INCLUDE ${IOIPSL_INCDIR} ${XIOS_INCDIR}" |
---|
| 513 | LIB="$LIB ${IOIPSL_LIBDIR} ${IOIPSL_LIB} ${XIOS_LIBDIR} ${XIOS_LIB}" |
---|
[1279] | 514 | fi |
---|
[1897] | 515 | |
---|
[1279] | 516 | if [[ "$cosp" == "true" ]] |
---|
| 517 | then |
---|
| 518 | CPP_KEY="$CPP_KEY CPP_COSP" |
---|
[2239] | 519 | COSP_PATH="$LIBFGCM/phylmd/cosp" |
---|
[1279] | 520 | # LIB="${LIB} -l${LIBPREFIX}cosp" |
---|
| 521 | fi |
---|
[783] | 522 | |
---|
[3358] | 523 | if [[ "$cosp2" == "true" ]] |
---|
| 524 | then |
---|
| 525 | CPP_KEY="$CPP_KEY CPP_COSP2" |
---|
| 526 | COSP_PATH="$LIBFGCM/phylmd/cosp2" |
---|
| 527 | # LIB="${LIB} -l${LIBPREFIX}cosp2" |
---|
| 528 | fi |
---|
| 529 | |
---|
[3491] | 530 | if [[ "$cospv2" == "true" ]] |
---|
| 531 | then |
---|
| 532 | CPP_KEY="$CPP_KEY CPP_COSPV2" |
---|
| 533 | COSP_PATH="$LIBFGCM/phylmd/cospv2" |
---|
| 534 | # LIB="${LIB} -l${LIBPREFIX}cosp2" |
---|
| 535 | fi |
---|
[3358] | 536 | |
---|
[4247] | 537 | if [[ "$cplocninca" == "TRUE" ]] |
---|
| 538 | then |
---|
| 539 | CPP_KEY="${CPP_KEY} CPP_CPLOCNINCA" |
---|
| 540 | fi |
---|
[3491] | 541 | |
---|
| 542 | |
---|
[1551] | 543 | INCLUDE="$INCLUDE ${NETCDF_INCDIR}" |
---|
[4426] | 544 | LIB="$LIB ${NETCDF_LIBDIR} ${NETCDF_LIB}" |
---|
[1551] | 545 | |
---|
[783] | 546 | ######################################################################## |
---|
| 547 | # calcul du nombre de dimensions |
---|
| 548 | ######################################################################## |
---|
| 549 | |
---|
| 550 | |
---|
[1279] | 551 | dim_full=$dim |
---|
| 552 | dim=`echo $dim | sed -e 's/[^0-9]/ /g'` |
---|
| 553 | set $dim |
---|
| 554 | dimc=$# |
---|
[783] | 555 | echo calcul de la dimension |
---|
| 556 | echo dim $dim |
---|
| 557 | echo dimc $dimc |
---|
| 558 | |
---|
| 559 | |
---|
| 560 | ######################################################################## |
---|
| 561 | # Gestion des dimensions du modele. |
---|
[1114] | 562 | # on cree ou remplace le fichier des dimensions |
---|
[783] | 563 | ######################################################################## |
---|
| 564 | |
---|
[1695] | 565 | cd $LIBFGCM/grid |
---|
[5271] | 566 | if [[ -f dimensions_mod.f90 ]] |
---|
[1695] | 567 | then |
---|
[4096] | 568 | if [[ $force_compile == true ]] |
---|
| 569 | then |
---|
[5271] | 570 | \rm -f $LIBFGCM/grid/dimensions_mod.f90 |
---|
[4096] | 571 | else |
---|
[5048] | 572 | echo "WARNING: you are probably already compiling the model somewhere else." |
---|
| 573 | echo "Wait until the first compilation is finished before launching this one." |
---|
| 574 | echo "If you are sure that you are not compiling elsewhere, " |
---|
| 575 | echo "If you are sure that you are not compiling elsewhere, then" |
---|
[5271] | 576 | echo rm -f $LIBFGCM/grid/dimensions_mod.f90 |
---|
[5048] | 577 | echo "before reruning the compilation" |
---|
| 578 | echo "or run makelmdz_fcm with option -force_compile" |
---|
| 579 | exit 1 |
---|
[4096] | 580 | fi |
---|
[1695] | 581 | fi |
---|
| 582 | |
---|
| 583 | |
---|
[5048] | 584 | |
---|
[783] | 585 | cd $LIBFGCM/grid/dimension |
---|
[1114] | 586 | ./makdim $dim |
---|
[5271] | 587 | cat $LIBFGCM/grid/dimensions_mod.f90 |
---|
[783] | 588 | cd $LMDGCM |
---|
| 589 | |
---|
| 590 | |
---|
| 591 | ######################################################################## |
---|
| 592 | # Differentes dynamiques (3d, 2d, 1d) |
---|
| 593 | ######################################################################## |
---|
| 594 | |
---|
[1279] | 595 | dimension=`echo $dim | wc -w` |
---|
[783] | 596 | echo dimension $dimension |
---|
| 597 | |
---|
[2239] | 598 | if (( $dimension == 1 )) |
---|
| 599 | then |
---|
| 600 | CPP_KEY="$CPP_KEY CPP_1D" |
---|
| 601 | ## no filtre in 1d: |
---|
| 602 | FILTRE_PATH=$LMDGCM/.void_dir |
---|
| 603 | ## no need to compile all routines in dyn3d_common either: |
---|
| 604 | DYN_COMMON_PATH=$LMDGCM/.void_dir |
---|
| 605 | ## no need to compile all routines in dynlmdz_phy... ; |
---|
| 606 | ## (because key ones are included in 1D main program) |
---|
| 607 | DYN_PHYS_PATH=$LMDGCM/.void_dir |
---|
[2242] | 608 | DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir |
---|
[2239] | 609 | fi |
---|
| 610 | |
---|
[783] | 611 | ###################################################################### |
---|
| 612 | # Traitement special pour le nouveau rayonnement de Laurent Li. |
---|
| 613 | # ---> YM desactive pour le traitemement en parallele |
---|
| 614 | ###################################################################### |
---|
| 615 | |
---|
[1279] | 616 | #if [[ -f $libf/phy$physique/raddim.h ]] |
---|
| 617 | #then |
---|
| 618 | # if [[ -f $libf/phy$physique/raddim.$dimh.h ]] |
---|
| 619 | #then |
---|
[783] | 620 | # \rm -f $libf/phy$physique/raddim.h |
---|
| 621 | # cp -p $libf/phy$physique/raddim.$dimh.h $libf/phy$physique/raddim.h |
---|
| 622 | # echo $libf/phy$physique/raddim.$dimh.h |
---|
| 623 | # cat $libf/phy$physique/raddim.h |
---|
| 624 | # else |
---|
| 625 | # echo On peut diminuer la taille de l executable en creant |
---|
| 626 | # echo le fichier $libf/phy$physique/raddim.$dimh.h |
---|
| 627 | # \cp -p $libf/phy$physique/raddim.defaut.h $libf/phy$physique/raddim.h |
---|
[1279] | 628 | # fi |
---|
| 629 | #fi |
---|
[783] | 630 | |
---|
| 631 | ###################################################################### |
---|
| 632 | # Gestion du filtre qui n'existe qu'en 3d. |
---|
| 633 | ###################################################################### |
---|
| 634 | |
---|
[1279] | 635 | if (( `expr $dimc \> 2` == 1 )) |
---|
| 636 | then |
---|
| 637 | filtre="FILTRE=$filtre" |
---|
[783] | 638 | else |
---|
[1279] | 639 | filtre="FILTRE= L_FILTRE= " |
---|
| 640 | fi |
---|
[783] | 641 | echo MACRO FILTRE $filtre |
---|
| 642 | |
---|
| 643 | echo $dimc |
---|
| 644 | |
---|
| 645 | |
---|
| 646 | |
---|
| 647 | ###################################################################### |
---|
| 648 | # Creation du suffixe de la configuration |
---|
| 649 | ###################################################################### |
---|
| 650 | |
---|
| 651 | |
---|
[1279] | 652 | SUFF_NAME=_${dim_full} |
---|
[4186] | 653 | SUFF_NAME=${SUFF_NAME}_phy${physique}_${rad} |
---|
[783] | 654 | |
---|
[1279] | 655 | if [[ "$parallel" != "none" ]] |
---|
| 656 | then |
---|
| 657 | SUFF_NAME=${SUFF_NAME}_para |
---|
[1680] | 658 | DYN=dyn${dimc}d${paramem} |
---|
| 659 | if [[ "$paramem" == "mem" ]] |
---|
| 660 | then |
---|
[2202] | 661 | SUFF_NAME=${SUFF_NAME}_${paramem} |
---|
| 662 | else |
---|
| 663 | echo "The version of the dynamics in dyn3dpar is no longer updated." |
---|
| 664 | echo "You should use option \"-mem\"." |
---|
| 665 | exit 1 |
---|
[1680] | 666 | fi |
---|
[783] | 667 | else |
---|
[1279] | 668 | SUFF_NAME=${SUFF_NAME}_seq |
---|
[2239] | 669 | if (( $dimension == 1 )) |
---|
| 670 | then |
---|
| 671 | # dynamics-related routines in"dyn1d" subdirectory of phy${physique} |
---|
| 672 | DYN=phy${physique}/dyn1d |
---|
| 673 | else |
---|
| 674 | DYN=dyn${dimc}d |
---|
| 675 | fi |
---|
[1279] | 676 | fi |
---|
[783] | 677 | |
---|
[1772] | 678 | if [[ $veget != "false" ]] |
---|
[1279] | 679 | then |
---|
| 680 | SUFF_NAME=${SUFF_NAME}_orch |
---|
| 681 | fi |
---|
[783] | 682 | |
---|
[3804] | 683 | if [[ $dust == "true" ]] |
---|
| 684 | then |
---|
| 685 | SUFF_NAME=${SUFF_NAME}_spla |
---|
| 686 | fi |
---|
| 687 | |
---|
[1279] | 688 | if [[ $couple != "false" ]] |
---|
| 689 | then |
---|
| 690 | SUFF_NAME=${SUFF_NAME}_couple |
---|
| 691 | fi |
---|
[783] | 692 | |
---|
[1279] | 693 | if [[ $chimie == "INCA" ]] |
---|
| 694 | then |
---|
| 695 | SUFF_NAME=${SUFF_NAME}_inca |
---|
| 696 | fi |
---|
[783] | 697 | |
---|
[3924] | 698 | if [[ "$isotopes" == "true" ]] |
---|
[2358] | 699 | then |
---|
[3924] | 700 | SUFF_NAME=${SUFF_NAME}_iso |
---|
| 701 | fi |
---|
| 702 | if [[ "$isoverif" == "true" ]] |
---|
| 703 | then |
---|
| 704 | SUFF_NAME=${SUFF_NAME}_isoverif |
---|
| 705 | fi |
---|
| 706 | if [[ "$isotrac" == "true" ]] |
---|
| 707 | then |
---|
| 708 | SUFF_NAME=${SUFF_NAME}_isotrac |
---|
| 709 | fi |
---|
| 710 | if [[ "$diagiso" == "true" ]] |
---|
| 711 | then |
---|
| 712 | SUFF_NAME=${SUFF_NAME}_diagiso |
---|
| 713 | fi |
---|
| 714 | |
---|
[3925] | 715 | if [[ $libphy == "true" ]] |
---|
[3924] | 716 | then |
---|
[2358] | 717 | # special case where we compile only the physics |
---|
| 718 | DYN=$LMDGCM/.void_dir |
---|
| 719 | DYN_COMMON_PATH=$LMDGCM/.void_dir |
---|
| 720 | FILTRE_PATH=$LMDGCM/.void_dir |
---|
| 721 | DYN_PHYS_PATH=$LMDGCM/.void_dir |
---|
| 722 | DYN_PHYS_SUB_PATH=$LMDGCM/.void_dir |
---|
| 723 | #and there is no main program to generate |
---|
| 724 | code="" |
---|
| 725 | SUFF_NAME="" |
---|
| 726 | else |
---|
| 727 | SUFF_NAME=${SUFF_NAME}.e |
---|
| 728 | fi |
---|
| 729 | |
---|
[783] | 730 | cd $LMDGCM |
---|
[1279] | 731 | config_fcm="config.fcm" |
---|
[783] | 732 | rm -f $config_fcm |
---|
| 733 | touch $config_fcm |
---|
| 734 | rm -f bin/${code}${SUFF_NAME}.e |
---|
[5306] | 735 | rm -f bin/gcm.e |
---|
[783] | 736 | rm -f arch.fcm |
---|
[1279] | 737 | rm -f arch.opt |
---|
[783] | 738 | |
---|
| 739 | echo "%ARCH $arch" >> $config_fcm |
---|
| 740 | echo "%INCDIR $INCLUDE" >> $config_fcm |
---|
| 741 | echo "%LIB $LIB" >> $config_fcm |
---|
| 742 | echo "%ROOT_PATH $PWD" >> $config_fcm |
---|
| 743 | echo "%LIBF $LIBFGCM" >> $config_fcm |
---|
| 744 | echo "%LIBO $LIBOGCM" >> $config_fcm |
---|
| 745 | echo "%DYN $DYN" >> $config_fcm |
---|
[2239] | 746 | echo "%DYN_COMMON $DYN_COMMON_PATH" >> $config_fcm |
---|
[2326] | 747 | echo "%PHY_COMMON $PHY_COMMON_PATH" >> $config_fcm |
---|
[2239] | 748 | echo "%FILTRE $FILTRE_PATH" >> $config_fcm |
---|
[783] | 749 | echo "%PHYS phy${physique}" >> $config_fcm |
---|
[2239] | 750 | echo "%DYN_PHYS $DYN_PHYS_PATH" >> $config_fcm |
---|
[2242] | 751 | echo "%DYN_PHYS_SUB $DYN_PHYS_SUB_PATH" >> $config_fcm |
---|
[3908] | 752 | echo "%RAD $RAD_PATH" >> $config_fcm |
---|
[2631] | 753 | echo "%DUST $DUST_PATH" >> $config_fcm |
---|
[2690] | 754 | echo "%STRATAER $STRATAER_PATH" >> $config_fcm |
---|
[3793] | 755 | echo "%INLANDSIS $INLANDSIS_PATH" >> $config_fcm |
---|
[1327] | 756 | echo "%COSP $COSP_PATH" >> $config_fcm |
---|
[783] | 757 | echo "%CPP_KEY $CPP_KEY" >> $config_fcm |
---|
| 758 | echo "%EXEC $code" >> $config_fcm |
---|
| 759 | echo "%SUFF_NAME $SUFF_NAME" >> $config_fcm |
---|
[1002] | 760 | echo "%COMPIL_FFLAGS $COMPIL_FFLAGS" >> $config_fcm |
---|
| 761 | echo "%PARA_FFLAGS $PARA_FFLAGS" >> $config_fcm |
---|
| 762 | echo "%PARA_LD $PARA_LD" >> $config_fcm |
---|
[1279] | 763 | echo "%EXT_SRC $EXT_SRC" >> $config_fcm |
---|
[783] | 764 | |
---|
[4773] | 765 | if [[ "$rad" == "ecrad" ]] |
---|
| 766 | then |
---|
| 767 | \cp bld.cfg.ecrad bld.cfg |
---|
| 768 | else |
---|
| 769 | \cp bld.cfg.rrtm bld.cfg |
---|
| 770 | fi |
---|
[1002] | 771 | |
---|
[1137] | 772 | ln -s arch/arch-${arch}.fcm arch.fcm |
---|
[1279] | 773 | if test -f arch/arch-${arch}.opt && [ $compil_mod = "prod" ] |
---|
| 774 | then |
---|
| 775 | ln -s arch/arch-${arch}.opt arch.opt |
---|
| 776 | else |
---|
| 777 | ln -s .void_file arch.opt |
---|
| 778 | fi |
---|
| 779 | |
---|
[4103] | 780 | set +e |
---|
| 781 | |
---|
[1002] | 782 | rm -f $LIBOGCM/${arch}${SUFF_NAME}/.config/fcm.bld.lock |
---|
[1802] | 783 | ./build_gcm ${fcm_path} -j $job $full |
---|
[4103] | 784 | build_status=$? |
---|
[783] | 785 | |
---|
[1279] | 786 | rm -rf tmp_src |
---|
| 787 | rm -rf config |
---|
[783] | 788 | ln -s $LIBOGCM/${arch}${SUFF_NAME}/.config config |
---|
[2358] | 789 | ln -s $LIBOGCM/${arch}${SUFF_NAME}/.config/ppsrc tmp_src |
---|
[1695] | 790 | |
---|
[5271] | 791 | if [[ -r $LIBFGCM/grid/dimensions_mod.f90 ]] |
---|
[1695] | 792 | then |
---|
| 793 | # Cleanup: remove dimension.h file |
---|
[5271] | 794 | \rm -f $LIBFGCM/grid/dimensions_mod.f90 |
---|
[1695] | 795 | fi |
---|
[4103] | 796 | |
---|
[4918] | 797 | # build netcdf95 library necessary for the makelmdz script |
---|
| 798 | if [[ $build_status = 0 ]] |
---|
| 799 | then |
---|
[5306] | 800 | cp bin/${code}${SUFF_NAME} bin/gcm.e |
---|
[4918] | 801 | if [[ ! -d tools/netcdf95/include ]] |
---|
| 802 | then |
---|
| 803 | mkdir tools/netcdf95/include tools/netcdf95/lib |
---|
| 804 | cp config/inc/netcdf95.mod config/inc/nf95_*mod tools/netcdf95/include |
---|
| 805 | cp config/obj/netcdf95.o config/obj/nf95_*o config/obj/check_start_count_m.o tools/netcdf95/lib |
---|
| 806 | cd tools/netcdf95/lib; ar rv libnetcdf95.a *.o; ranlib libnetcdf95.a |
---|
| 807 | cd - |
---|
| 808 | fi |
---|
| 809 | fi |
---|
| 810 | |
---|
[4103] | 811 | exit $build_status |
---|