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source: LMDZ6/trunk/makelmdz @ 3996

Last change on this file since 3996 was 3996, checked in by Ehouarn Millour, 4 years ago
Code cleanup. Remove obsolete "phymar" package and references thereto in the maklmdz[_fcm] scripts. EM
Property copyright set to Name of program: LMDZ Creation date: 1984 Version: LMDZ5 License: CeCILL version 2 Holder: Laboratoire de m\'et\'eorologie dynamique, CNRS, UMR 8539 See the license file in the root directory Property svn:executable set to ``*
File size: 25.2 KB

Line
1	#!/bin/bash
2	#
3	# $Id$
4	#
5	#
6	########################################################################
7	# for debug, uncomment line below
8	#set -xv
9	########################################################################
10	# options par defaut pour la commande make
11	########################################################################
12	dim="96x72x19"
13	physique=lmd
14	code=gcm
15	filtre=filtrez
16	grille=reg
17	couple=false
18	veget=false
19	chimie=false
20	parallel=none
21	paramem="par"
22	compil_mod=prod
23	io=ioipsl
24	LIBPREFIX=""
25	fcm_path=none
26	cosp=false
27	cosp2=false
28	cospv2=false
29	inlandsis=false
30	rrtm=false
31	rad=""
32	dust=false
33	strataer=false
34	full=""
35
36	arch_defined="FALSE"
37	arch_path="arch"
38	arch_default_path="arch"
39
40	# guess a default 'arch'
41	arch="local" # start with assuming we're on a local machine with local arch file
42	arch_defined="TRUE" # and thus also set arch_defined to true
43	## try to recognise machine and infer arch from it
44	machine=`hostname`
45	if [[ "${machine:0:4}" == "jean" ]]
46	then
47	arch="X64_JEANZAY"
48	fi
49	if [[ "${machine:0:7}" == "platine" ]]
50	then
51	arch="IA64_PLATINE"
52	fi
53	if [[ "${machine:0:6}" == "titane" ]]
54	then
55	arch="X64_TITANE"
56	fi
57	if [[ "${machine:0:8}" == "mercure1" ]]
58	then
59	arch="SX8_MERCURE"
60	fi
61	if [[ "${machine:0:8}" == "mercure2" ]]
62	then
63	arch="SX9_MERCURE"
64	fi
65
66	LMDGCM=`pwd -P`
67	LIBFGCM=$LMDGCM/libf
68	LIBOGCM=$LMDGCM/libo
69	if [[ ! -d $LIBOGCM ]]
70	then
71	# create the directory
72	mkdir $LIBOGCM
73	if [[ ! $? ]]
74	then
75	echo "Failed to create directory $LIBOGCM"
76	exit
77	fi
78	fi
79	#COSP_PATH=$LMDGCM/.void_dir
80
81
82
83	localdir=`pwd -P`
84	########################################################################
85	# Quelques initialisations de variables du shell.
86	########################################################################
87
88	CPP_KEY="IN_LMDZ"
89	INCLUDE='-I$(LIBF)/grid -I$(LIBF)/misc -I$(LIBF)/filtrez -I. '
90	LIB=""
91	adjnt=""
92	##COMPIL_FFLAGS="%PROD_FFLAGS"
93	PARA_FFLAGS=""
94	PARA_LD=""
95	EXT_SRC=""
96	#src_dirs: directories containing source files
97	src_dirs="grid misc"
98	########################################################################
99	# lecture des options
100	########################################################################
101
102	while (($# > 0))
103	do
104	case $1 in
105	"-h") cat <<fin
106	Usage :
107	makelmdz [options] -arch nom_arch exec
108	[-h] : brief help
109	[-d [[IMx]JMx]LM] : IM, JM, LM are the dimensions in x, y, z (default: $dim)
110	[-p PHYS] : set of physical parametrizations (in libf/phyPHYS), (default: lmd)
111	[-prod / -dev / -debug] : compilation mode production (default) / developement / debug
112	[-c false/MPI1/MPI2] : coupling with ocean model : MPI1/MPI2/false (default: false)
113	[-v false/orchidee2.0/orchidee1.9/true] : version of the vegetation model to include (default: false)
114	false : no vegetation model
115	orchidee2.1 : compile using ORCHIDEE 2.1 (or more recent version)
116	orchidee2.0 : compile using ORCHIDEE 2.0 (or more recent version)
117	orchidee1.9 : compile using ORCHIDEE up to the version including OpenMP in ORCHIDEE : tag 1.9-1.9.5(version AR5)-1.9.6
118	true : (obsolete; for backward compatibility) use ORCHIDEE tag 1.9-1.9.6
119	[-chimie INCA/false] : with INCA chemistry model or without (default: false)
120	[-cosp true/false] : compile with/without cosp package (default: false)
121	[-cosp2 true/false] : compile with/without cosp2 package (default: false)
122	[-cospv2 true/false] : compile with/without cospv2 package (default: false)
123	[-inlandsis true/false] : compile with/without inlandsis package (default: false)
124	[-rrtm true/false] : compile with/without rrtm package (default: false)
125	[-rad old/rrtm/ecrad] : compile with old/rrtm/ecrad radiatif code (default: old)
126	[-dust true/false] : compile with/without the dust package from Boucher et al. (default: false)
127	[-strataer true/false] : compile with/without the strat aer package from Boucher et al. (default: false)
128	[-parallel none/mpi/omp/mpi_omp] : parallelism (default: none) : mpi, openmp or mixted mpi_openmp
129	[-g GRI] : grid configuration in dyn3d/GRI_xy.h (default: reg, inclues a zoom)
130	[-io ioipsl/mix/xios] : Input/Output library (default: ioipsl)
131	[-include INCLUDES] : extra include path to add
132	[-cpp CPP_KEY] : additional preprocessing definitions
133	[-adjnt] : adjoint model, not operational ...
134	[-mem] : reduced memory dynamics (if in parallel mode)
135	[-filtre NOMFILTRE] : use filtre from libf/NOMFILTRE (default: filtrez)
136	[-full] : Full (re)compilation (from scratch)
137	[-link LINKS] : additional links with other libraries
138	[-fcm_path path] : path to the fcm tool (default: tools/fcm/bin)
139	[-ext_src path] : path to an additional set of routines to compile with the model
140	[-arch_path path] : path to architecture files (default: $arch_default_path)
141	-arch nom_arch : target architecture
142	exec : executable to build
143	fin
144	exit;;
145	"-d")
146	dim=$2 ; shift ; shift ;;
147
148	"-p")
149	physique="$2" ; shift ; shift ;;
150
151	"-g")
152	grille="$2" ; shift ; shift ;;
153
154	"-c")
155	couple="$2" ; shift ; shift ;;
156
157	"-prod")
158	compil_mod="prod" ; shift ;;
159
160	"-dev")
161	compil_mod="dev" ; shift ;;
162
163	"-debug")
164	compil_mod="debug" ; shift ;;
165
166	"-io")
167	io="$2" ; shift ; shift ;;
168
169	"-v")
170	veget="$2" ; shift ; shift ;;
171
172	"-chimie")
173	chimie="$2" ; shift ; shift ;;
174
175	"-parallel")
176	parallel="$2" ; shift ; shift ;;
177
178	"-include")
179	INCLUDE="$INCLUDE -I$2" ; shift ; shift ;;
180
181	"-cpp")
182	CPP_KEY="$CPP_KEY $2" ; shift ; shift ;;
183
184	"-cosp")
185	cosp="$2" ; shift ; shift ;;
186
187	"-cosp2")
188	cosp2="$2" ; shift ; shift ;;
189
190	"-cosp2")
191	cospv2="$2" ; shift ; shift ;;
192
193	"-inlandsis")
194	inlandsis="$2" ; shift ; shift ;;
195
196	"-rrtm")
197	rrtm="$2" ; if [ "$2" = "false" ] ; then rad="old" ; else rad="rrtm" ; fi ; shift ; shift ;;
198
199	"-rad")
200	rad="$2" ; shift ; shift ;;
201
202	"-dust")
203	dust="$2" ; shift ; shift ;;
204
205	"-strataer")
206	strataer="$2" ; shift ; shift ;;
207
208	"-mem")
209	paramem="mem" ; shift ;;
210
211	"-filtre")
212	filtre=$2 ; shift ; shift ;;
213
214	"-full")
215	full="full" ; shift ;;
216
217	"-link")
218	LIB="$LIB $2" ; shift ; shift ;;
219
220	"-fcm_path")
221	fcm_path=$2 ; shift ; shift ;;
222
223	"-ext_src")
224	EXT_SRC=$2 ; src_dirs="$src_dirs $EXT_SRC" ; shift ; shift ;;
225
226	"-arch")
227	arch=$2 ; arch_defined="TRUE" ; shift ; shift ;;
228
229	"-arch_path")
230	arch_path=$2 ; arch_path_defined="TRUE"; shift ; shift ;;
231
232	*)
233	code="$1" ; shift ;;
234	esac
235	done
236
237	###############################################################
238	# lecture des chemins propres \`a l'architecture de la machine #
239	###############################################################
240	rm -f .void_file
241	echo > .void_file
242	rm -rf .void_dir
243	mkdir .void_dir
244
245	if [[ "$arch_defined" == "TRUE" ]]
246	then
247	rm -f arch.path
248	rm -f arch.fcm
249	rm -f arch.env
250
251	if test -f $arch_path/arch-${arch}.path
252	then
253	ln -s $arch_path/arch-${arch}.path arch.path
254	elif test -f $arch_default_path/arch-${arch}.path
255	then
256	ln -s $arch_default_path/arch-${arch}.path arch.path
257	fi
258
259	if test -f $arch_path/arch-${arch}.fcm
260	then
261	ln -s $arch_path/arch-${arch}.fcm arch.fcm
262	elif test -f $arch_default_path/arch-${arch}.fcm
263	then
264	ln -s $arch_default_path/arch-${arch}.fcm arch.fcm
265	fi
266
267	if test -f $arch_path/arch-${arch}.env
268	then
269	ln -s $arch_path/arch-${arch}.env arch.env
270	elif test -f $arch_default_path/arch-${arch}.env
271	then
272	ln -s $arch_default_path/arch-${arch}.env arch.env
273	else
274	ln -s .void_file arch.env
275	fi
276	# source architecture PATH and ENV files
277	source arch.env
278	source arch.path
279	else
280	echo "You must define a target architecture"
281	exit 1
282	fi
283
284	########################################################################
285	# Definition des clefs CPP, des chemins des includes et modules
286	# et des libraries
287	########################################################################
288
289	# basic compile flags from arch.fcm file
290	archfileline=$( grep -i '^%BASE_FFLAGS' arch.fcm )
291	COMPIL_FFLAGS=$( echo ${archfileline##%BASE_FFLAGS} )
292
293	# other compile flags, depending on compilation mode
294	if [[ "$compil_mod" == "prod" ]]
295	then
296	## read COMPIL_FFLAGS from arch.fcm file
297	archfileline=$( grep -i '^%PROD_FFLAGS' arch.fcm )
298	archfileopt=$( echo ${archfileline##%PROD_FFLAGS} )
299	COMPIL_FFLAGS="${COMPIL_FFLAGS} ${archfileopt}"
300	elif [[ "$compil_mod" == "dev" ]]
301	then
302	## read %DEV_FFLAGS from arch.fcm file
303	archfileline=$( grep -i '^%DEV_FFLAGS' arch.fcm )
304	archfileopt=$( echo ${archfileline##%DEV_FFLAGS} )
305	COMPIL_FFLAGS="${COMPIL_FFLAGS} ${archfileopt}"
306	elif [[ "$compil_mod" == "debug" ]]
307	then
308	## read %DEBUG_FFLAGS from arch.fcm file
309	archfileline=$( grep -i '^%DEBUG_FFLAGS' arch.fcm )
310	archfileopt=$( echo ${archfileline##%DEBUG_FFLAGS} )
311	COMPIL_FFLAGS="${COMPIL_FFLAGS} ${archfileopt}"
312	fi
313
314	# add CPP_KEY defined in arch.fcm file
315	archfileline=$( grep -i '^%FPP_DEF' arch.fcm )
316	archfileopt=$( echo ${archfileline##%FPP_DEF} )
317	CPP_KEY="$CPP_KEY ${archfileopt}"
318
319	# get compiler name from arch.fcm file
320	archfileline=$( grep -i '^%COMPILER' arch.fcm )
321	fcompiler=$( echo ${archfileline##%COMPILER} )
322
323	# get linker name from arch.fcm file
324	archfileline=$( grep -i '^%LINK' arch.fcm )
325	linker=$( echo ${archfileline##%LINK} )
326
327	# get ar command from arch.fcm file
328	archfileline=$( grep -i '^%AR ' arch.fcm )
329	arcommand=$( echo ${archfileline##%AR} )
330
331	# get ar command options from arch.fcm file
332	archfileline=$( grep -i '^%ARFLAGS' arch.fcm )
333	arflags=$( echo ${archfileline##%ARFLAGS} )
334
335	# get make utility from arch.fcm file
336	archfileline=$( grep -i '^%MAKE' arch.fcm )
337	makecommand=$( echo ${archfileline##%MAKE} )
338
339	# get basic libraries to link with arch.fcm file
340	archfileline=$( grep -i '^%BASE_LD' arch.fcm )
341	archfileopt=$( echo ${archfileline##%BASE_LD} )
342	LIB="$LIB ${archfileopt}"
343
344	# add Include files defined in arch.fcm file for pre-processing
345	archfileline=$( grep -i '^%FPP_FLAGS' arch.fcm )
346	for inc in $archfileline ; do INCLUDE="$INCLUDE `echo $inc \| grep '\-I'`" ; done
347
348	phys_root=$physique
349	if [[ "${physique:0:3}" == "lmd" ]] ; then phys_root=lmd ; fi
350	if [[ "${physique:0:4}" == "mars" ]] ; then phys_root=mars ; fi
351	if [[ "${physique:0:3}" == "std" ]] ; then phys_root=std ; fi
352	if [[ "${physique:0:5}" == "venus" ]] ; then phys_root=venus ; fi
353	if [[ "${physique:0:5}" == "titan" ]] ; then phys_root=titan ; fi
354	if [[ "${physique:0:3}" == "dev" ]] ; then phys_root=dev ; fi
355
356	if [[ "$physique" != "nophys" ]]
357	then
358	#We'll use some physics
359	src_dirs="$src_dirs phy_common phy$physique"
360	LIBPHY='$(LIBO)/libphy'"$physique"'.a'
361	LIBPHY_COMMON='$(LIBO)/libphy_common.a'
362	lib_phy='-lphy'"$physique"' -lphy_common'
363	CPP_KEY="$CPP_KEY CPP_PHYS"
364	if [[ $phys_root == "lmd" ]]
365	then
366	#For lmd physics, default planet type is Earth
367	CPP_KEY="$CPP_KEY CPP_EARTH"
368	fi
369	fi
370
371	if [[ "$chimie" == "INCA" ]]
372	then
373	CPP_KEY="$CPP_KEY INCA"
374	INCLUDE="$INCLUDE -I${INCA_INCDIR}"
375	LIB="$LIB -L${INCA_LIBDIR} -lchimie"
376	libchimie=" -L${INCA_LIBDIR} -lchimie"
377	fi
378
379	if [[ "$couple" != "false" ]]
380	then
381	CPP_KEY="$CPP_KEY CPP_COUPLE"
382	INCLUDE="$INCLUDE -I${OASIS_INCDIR}"
383	LIB="$LIB -L${OASIS_LIBDIR} -lpsmile.${couple} -lmpp_io"
384	fi
385
386	if [[ "$parallel" == "none" ]]
387	then
388	FLAG_PARA=''
389	else
390	FLAG_PARA="$paramem"
391	if [[ $paramem == par ]]
392	then
393	echo "The version of the dynamics in dyn3dpar is no longer updated."
394	echo "You should use option \"-mem\"."
395	exit 1
396	fi
397	fi
398
399	if [[ "$parallel" == "mpi" ]]
400	then
401	CPP_KEY="$CPP_KEY CPP_PARA CPP_MPI"
402	# MPI additional compilation options
403	archfileline=$( grep -i '^%MPI_FFLAGS' arch.fcm )
404	PARA_FFLAGS=$( echo ${archfileline##%MPI_FFLAGS} )
405	# MPI additional links
406	archfileline=$( grep -i '^%MPI_LD' arch.fcm )
407	PARA_LD=$( echo ${archfileline##%MPI_LD} )
408	elif [[ "$parallel" == "omp" ]]
409	then
410	CPP_KEY="$CPP_KEY CPP_PARA CPP_OMP"
411	# OMP additional compilation options
412	archfileline=$( grep -i '^%OMP_FFLAGS' arch.fcm )
413	PARA_FFLAGS=$( echo ${archfileline##%OMP_FFLAGS} )
414	# OMP additional links
415	archfileline=$( grep -i '^%OMP_LD' arch.fcm )
416	PARA_LD=$( echo ${archfileline##%OMP_LD} )
417	elif [[ "$parallel" == "mpi_omp" ]]
418	then
419	CPP_KEY="$CPP_KEY CPP_PARA CPP_MPI CPP_OMP"
420	# MPI additional compilation options
421	archfileline=$( grep -i '^%MPI_FFLAGS' arch.fcm )
422	PARA_FFLAGS=$( echo ${archfileline##%MPI_FFLAGS} )
423	# OMP additional compilation options
424	archfileline=$( grep -i '^%OMP_FFLAGS' arch.fcm )
425	PARA_FFLAGS="${PARA_FFLAGS} "$( echo $archfileopt ${archfileline##%OMP_FFLAGS} )
426	# MPI additional links
427	archfileline=$( grep -i '^%MPI_LD' arch.fcm )
428	PARA_LD=$( echo ${archfileline##%MPI_LD} )
429	# OMP additional links
430	archfileline=$( grep -i '^%OMP_LD' arch.fcm )
431	PARA_LD="${PARA_LD} "$( echo $archfileopt ${archfileline##%OMP_LD} )
432	fi
433
434	if [[ ( "$parallel" == "omp" \|\| "$parallel" == "mpi_omp" ) \
435	&& "$compil_mod" == "debug" ]]
436	then
437	echo "Usually, parallelization with OpenMP requires some optimization."
438	echo "We suggest switching to \"-dev\"."
439	fi
440
441
442	#==============================================================================
443	if [ "$veget" = "true" -o "$veget" = "orchidee1.9" -o "$veget" = "orchidee2.0" -o "$veget" = "orchidee2.1" ]
444	then
445
446	INCLUDE="${INCLUDE} -I${ORCH_INCDIR}"
447	CPP_KEY="$CPP_KEY CPP_VEGET"
448	# temporary, for Orchidee versions 1.9.* (before openmp activation)
449	if [[ "$veget" == "orchidee1.9" ]] ; then
450	CPP_KEY="$CPP_KEY ORCHIDEE_NOOPENMP"
451	fi
452	if [[ "$veget" == "orchidee2.0" ]] ; then
453	orch_libs="sechiba parameters stomate parallel orglob orchidee"
454	CPP_KEY="$CPP_KEY ORCHIDEE_NOUNSTRUCT"
455	elif [[ "$veget" == "orchidee2.1" ]] ; then
456	orch_libs="sechiba parameters stomate parallel orglob orchidee"
457	else
458	orch_libs="sechiba parameters stomate parallel orglob"
459	fi
460	LIB="${LIB} -L${ORCH_LIBDIR}"
461	for lib in ${orch_libs} ; do
462	if [ -f ${ORCH_LIBDIR}/lib${LIBPREFIX}$lib.a ] ; then
463	LIB="${LIB} -l${LIBPREFIX}$lib "
464	fi
465	done
466	elif [[ "$veget" != "false" ]] ; then
467	echo "Option -v $veget does not exist"
468	echo "Use ./makelmdz -h for more information"
469	exit
470	fi
471
472	#===============================================================================
473	if [[ $io == ioipsl ]]
474	then
475	CPP_KEY="$CPP_KEY CPP_IOIPSL"
476	INCLUDE="$INCLUDE -I${IOIPSL_INCDIR}"
477	LIB="$LIB -L${IOIPSL_LIBDIR} -l${LIBPREFIX}ioipsl"
478	elif [[ $io == mix ]]
479	then
480	# For now, xios implies also using ioipsl
481	CPP_KEY="$CPP_KEY CPP_IOIPSL CPP_XIOS"
482	INCLUDE="$INCLUDE -I${IOIPSL_INCDIR} -I${XIOS_INCDIR}"
483	LIB="$LIB -L${IOIPSL_LIBDIR} -l${LIBPREFIX}ioipsl -L${XIOS_LIBDIR} -l${LIBPREFIX}stdc++ -l${LIBPREFIX}xios -l${LIBPREFIX}stdc++"
484	elif [[ $io == xios ]]
485	then
486	# For now, xios implies also using ioipsl
487	CPP_KEY="$CPP_KEY CPP_IOIPSL CPP_XIOS CPP_IOIPSL_NO_OUTPUT"
488	INCLUDE="$INCLUDE -I${IOIPSL_INCDIR} -I${XIOS_INCDIR}"
489	LIB="$LIB -L${IOIPSL_LIBDIR} -l${LIBPREFIX}ioipsl -L${XIOS_LIBDIR} -l${LIBPREFIX}stdc++ -l${LIBPREFIX}xios -l${LIBPREFIX}stdc++"
490	fi
491
492	if [[ "$cosp" == "true" ]]
493	then
494	CPP_KEY="$CPP_KEY CPP_COSP"
495	# COSP_PATH="$LIBFGCM/phylmd/cosp"
496	src_dirs="$src_dirs phy${physique}/cosp"
497	# LIB="${LIB} -l${LIBPREFIX}cosp"
498	# opt_dep="$opt_dep cosp"
499	# lcosp="-l${LIBPREFIX}cosp"
500	INCLUDE="$INCLUDE"' -I$(LIBF)/'phy${physique}'/cosp'
501	fi
502
503	if [[ "$cosp2" == "true" ]]
504	then
505	CPP_KEY="$CPP_KEY CPP_COSP2"
506	src_dirs="$src_dirs phy${physique}/cosp2"
507	INCLUDE="$INCLUDE"' -I$(LIBF)/'phy${physique}'/cosp2'
508	fi
509
510	if [[ "$cospv2" == "true" ]]
511	then
512	CPP_KEY="$CPP_KEY CPP_COSPV2"
513	src_dirs="$src_dirs phy${physique}/cospv2"
514	INCLUDE="$INCLUDE"' -I$(LIBF)/'phy${physique}'/cospv2'
515	fi
516
517
518	if [[ "$inlandsis" == "true" ]]
519	then
520	CPP_KEY="$CPP_KEY CPP_INLANDSIS"
521	src_dirs="$src_dirs phy${physique}/inlandsis"
522	fi
523
524
525	if [[ "$rad" == "rrtm" ]]
526	then
527	CPP_KEY="$CPP_KEY CPP_RRTM"
528	src_dirs="$src_dirs phy${physique}/rrtm"
529	fi
530	if [[ "$rad" == "ecrad" ]]
531	then
532	CPP_KEY="$CPP_KEY CPP_ECRAD"
533	src_dirs="$src_dirs phy${physique}/ecrad"
534	fi
535
536	if [[ "$dust" == "true" ]]
537	then
538	CPP_KEY="$CPP_KEY CPP_Dust"
539	src_dirs="$src_dirs phy${physique}/Dust"
540	fi
541
542	if [[ "$strataer" == "true" ]]
543	then
544	CPP_KEY="$CPP_KEY CPP_StratAer"
545	src_dirs="$src_dirs phy${physique}/StratAer"
546	fi
547
548	#add new ocean skin modelisation to source dir by default
549
550	src_dirs="$src_dirs phy${physique}/Ocean_skin"
551
552
553	INCLUDE="$INCLUDE ${NETCDF_INCDIR}"
554	LIB="$LIB ${NETCDF_LIBDIR}"
555
556	########################################################################
557	# calcul du nombre de dimensions
558	########################################################################
559
560
561	dim_full=$dim
562	dim=`echo $dim \| sed -e 's/[^0-9]/ /g'`
563	set $dim
564	dimc=$#
565	echo calcul de la dimension
566	echo dim $dim
567	echo dimc $dimc
568
569	########################################################################
570	# Gestion des dimensions du modele.
571	# on cree ou remplace le fichier des dimensions
572	########################################################################
573
574	cd $LIBFGCM/grid
575	if [[ -f dimensions.h ]]
576	then
577	echo 'ATTENTION: vous etes sans doute en train de compiler le modele par ailleurs'
578	echo "Attendez que la premiere compilation soit terminee pour relancer la suivante."
579	echo "Si vous etes sur que vous ne compilez pas le modele par ailleurs,"
580	echo vous pouvez continuer en repondant oui.
581	echo "Voulez-vous vraiment continuer?"
582	echo ""
583	echo "WARNING: you are probably already compiling the model somewhere else."
584	echo "Wait until the first compilation is finished before launching this one."
585	echo "If you are sure that you are not compiling elsewhere, just answer "
586	echo "yes (or 'oui') to the question below to proceed."
587	echo "Do you wish to continue?"
588	read reponse
589	if [[ $reponse == "oui" \|\| $reponse == "yes" ]]
590	then
591	\rm -f $LIBFGCM/grid/dimensions.h
592	else
593	exit
594	fi
595	fi
596
597	cd $LIBFGCM/grid/dimension
598	./makdim $dim
599	if (($? != 0))
600	then
601	exit 1
602	fi
603
604	cat $LIBFGCM/grid/dimensions.h
605	cd $LMDGCM
606
607	########################################################################
608	# Differentes dynamiques (3d, 2d, 1d)
609	########################################################################
610
611	if (( $dimc == 3 )) ; then
612	src_dirs="$src_dirs $filtre dyn3d_common dyn3d${FLAG_PARA}"
613	if [[ $physique != "nophys" ]] ; then
614	src_dirs="$src_dirs dynphy_lonlat dynphy_lonlat/phy${phys_root}"
615	libdyn_phy="-ldynphy_lonlat"
616	LIBDYN_PHYS='$(LIBO)/libdynphy_lonlat.a'
617	INCLUDE="$INCLUDE "'-I$(LIBF)/dynphy_lonlat'
618	INCLUDE="$INCLUDE "'-I$(LIBF)/dynphy_lonlat/'"phy${phys_root}"
619	fi
620	cd $LIBFGCM/grid
621	\rm fxyprim.h
622	cp -p fxy_${grille}.h fxyprim.h
623	filtre="FILTRE=$filtre"
624	INCLUDE="$INCLUDE "'-I$(LIBF)/dyn3d${FLAG_PARA} -I$(LIBF)/dyn3d_common '
625	elif (( $dimc == 2 )) ; then
626	src_dirs="$src_dirs dyn2d"
627	filtre="FILTRE= L_FILTRE= "
628	INCLUDE="$INCLUDE "'-I$(LIBF)/dyn2d'
629	elif (( $dimc == 1 )) ; then
630	#src_dirs="$src_dirs dyn3d dyn3d_common filtrez"
631	src_dirs="$src_dirs phy${physique}/dyn1d"
632	CPP_KEY="$CPP_KEY CPP_1D"
633	filtre="L_DYN= DYN= FILTRE= L_FILTRE= "
634	#INCLUDE="$INCLUDE "'-I$(LIBF)/dyn3d -I$(LIBF)/dyn3d_common ' # Pas tres propre
635	INCLUDE="$INCLUDE "' -I$(LIBF)/phy'"$physique"'/dyn1d'
636	else
637	echo Dimension dimc=$dimc pas prevu ; exit
638	fi
639
640	cd $LMDGCM
641
642	########################################################################
643	# library directory name:
644	########################################################################
645
646	nomlib=`echo ${arch}_${physique}_${dim_full}_${grille}_${compil_mod}_parall${parallel}_${CPP_KEY}_${FLAG_PARA} \| sed -e 's/ //g' -e 's/-//g ' \| sed -e 's/CPP_//g'`
647	echo "Path to library: "$nomlib
648
649	########################################################################
650	# Cleanup for a full recompilation, if requested
651	########################################################################
652
653	if [[ $full == "full" ]]
654	then
655	# remove makefile and librairies
656	echo "-full option: recompiling from scratch"
657	\rm -f makefile
658	\rm -rf "${LIBOGCM}/${nomlib}"
659	fi
660
661	########################################################################
662	# Avant de lancer le make, on recree le makefile si necessaire
663	########################################################################
664	########################################################################
665	# c'est a dire dans 3 cas:
666	# 1. si la liste des fichiers .F et .h a ete modifiee depuis la
667	# derniere creation du makefile
668	# 2. si le fichier contenant cette liste "liste_des_sources"
669	# n'existe pas.
670	# 3. Si le makefile n'existe pas.
671	########################################################################
672	cd $LMDGCM
673
674
675	if [[ -r .makelmdz ]]
676	then
677	old_lmdz_configuration=$(cat .makelmdz )
678	else
679	old_lmdz_configuration=""
680	fi
681	lmdz_configuration="$src_dirs"
682	if [[ "$lmdz_configuration" != "$old_lmdz_configuration" ]]
683	then
684	configuration_change="true"
685	else
686	configuration_change="false"
687	fi
688
689	mkdir -p make_dir
690	suf_make=`echo $src_dirs \| sed -e 's/\//_/g' -e 's/ /_/g'`
691	echo suf_make $suf_make
692
693	\rm tmp77 tmp90
694	for dir in $src_dirs ; do
695	find libf/$dir -name '*.[Fh]' -print \| sort >> tmp77
696	find libf/$dir -name '*.F90' -print \| sort >> tmp90
697	done
698
699	liste77=make_dir/liste_des_sources_f77_$suf_make
700	liste90=make_dir/liste_des_sources_f90_$suf_make
701	makefile=make_dir/makefile_$suf_make
702
703	if [[ $configuration_change == "true" \|\| ! ( -r $makefile ) \|\| ! ( -r $liste90 ) \|\| ! ( -r $liste77 ) \|\| ` diff tmp77 $liste77 \| wc -w ` -ne 0 \|\| ` diff tmp90 $liste90 \| wc -w ` -ne 0 ]]
704	then
705	echo "les fichiers suivants ont ete crees ou detruits"
706	echo "ou les fichiers suivants sont passes ou ne sont plus en Fortran 90"
707	diff $liste77 tmp77
708	diff $liste90 tmp90
709	\cp -f tmp77 $liste77
710	\cp -f tmp90 $liste90
711	echo "Recreating the makefile"
712	echo "src_dirs: $src_dirs"
713	./create_make_gcm $src_dirs > tmp
714	\mv -f tmp $makefile
715	echo "New makefile created"
716	fi
717
718	ln -sf $makefile makefile
719
720	#Create a .makelmdz file containing main compilation option for later comparisons
721	echo "$lmdz_configuration" > .makelmdz
722
723	#################################################################
724	# Preparation de l'execution de la comande make
725	#################################################################
726
727	source_code=${code}.F
728	dirmain=dyn${dimc}d${FLAG_PARA}
729	if [[ -r $LMDGCM/libf/dyn${dimc}d${FLAG_PARA}/${code}.F90 ]]
730	then
731	source_code=${code}.F90
732	elif [[ -r $LMDGCM/libf/phy$physique/${code}.F90 ]] ; then
733	dirmain=phy$physique
734	source_code=${code}.F90
735	elif [[ -r $LMDGCM/libf/dynphy_lonlat/phy$phys_root/${code}.F90 ]] ; then
736	dirmain="dynphy_lonlat/phy${phys_root}"
737	source_code=${code}.F90
738	elif [[ -r $LMDGCM/libf/phy$physique/dyn1d/${code}.F90 ]] ; then
739	dirmain=phy$physique/dyn1d
740	source_code=${code}.F90
741	fi
742
743	if [[ ! -d "${LIBOGCM}/${nomlib}" ]]
744	then
745	mkdir ${LIBOGCM}/${nomlib}
746	# check we indeed managed to create the directory
747	if [[ ! $? ]]
748	then
749	echo "Error: could not create directory ${LIBOGCM}/${nomlib}"
750	exit
751	fi
752	fi
753
754	# where module files are created
755	mod_loc_dir=$localdir
756
757	if [[ "$physique" != "nophys" ]]
758	then
759	INCLUDE="$INCLUDE"' -I$(LIBF)/phy'"$physique"
760	fi
761	INCLUDE="$INCLUDE"' -I'${LIBOGCM}/${nomlib}
762
763	# ranlib utility (check it exists or else default to ls)
764	if [[ `which ranlib > /dev/null 2>&1 ; echo $?` -eq 0 ]]
765	then
766	ranlib="ranlib"
767	else
768	ranlib="ls"
769	fi
770
771	# add CPP keys to COMPIL_FLAGS
772	# (but first add -D before all CPP_KEY items)
773	cpp_definitions=`echo $CPP_KEY \| sed -e 's/[A-Za-z_=0-9]*/-D&/g'`
774	# (but add a -WF,-D before all CPP_KEY items) => for xlf on Vargas
775	if [[ "${fcompiler:0:3}" == "xlf" ]]
776	then
777	cpp_definitions=`echo $CPP_KEY \| sed -e 's/[A-Za-z_=0-9]*/-WF,-D&/g'`
778	fi
779	COMPIL_FFLAGS="${COMPIL_FFLAGS} ${cpp_definitions}"
780
781	#################################################################
782	# Execution du make
783	#################################################################
784	echo $makecommand RANLIB=$ranlib -f $LMDGCM/makefile \
785	OPTION_DEP="$opt_dep" OPTION_LINK="$LIB ${PARA_LD}" \
786	OPTIM90="${COMPIL_FFLAGS} ${PARA_FFLAGS}" \
787	OPTIMTRU90="${COMPIL_FFLAGS} ${PARA_FFLAGS}" \
788	OPTIM="${COMPIL_FFLAGS} ${PARA_FFLAGS}" \
789	INCLUDE="$INCLUDE" \
790	$filtre \
791	LIBO=${LIBOGCM}/${nomlib} \
792	"PHYS=$physique" \
793	LIBPHY=${LIBPHY} \
794	LIBPHY_COMMON=${LIBPHY_COMMON} \
795	LIBDYN_PHYS=${LIBDYN_PHYS} \
796	DIM=$dimc \
797	FLAG_PARA=$FLAG_PARA \
798	L_PHY="$lib_phy" \
799	L_DYN_PHY="$libdyn_phy" \
800	L_ADJNT=$adjnt \
801	L_COSP="$lcosp" \
802	L_COSP2="$lcosp2" \
803	L_COSPV2="$lcospv2" \
804	L_CHIMIE="$libchimie" \
805	LOCAL_DIR="$localdir" \
806	F77="$fcompiler" \
807	F90="$fcompiler" \
808	OPLINK="$LIB" \
809	LINK="$linker" \
810	GCM="$LMDGCM" \
811	MOD_LOC_DIR=$mod_loc_dir \
812	MOD_SUFFIX="mod" \
813	AR=$arcommand \
814	ARFLAGS="$arflags" \
815	DIRMAIN=$dirmain \
816	SOURCE=$source_code \
817	PROG=$code
818
819	$makecommand RANLIB=$ranlib -f $LMDGCM/makefile \
820	OPTION_DEP="$opt_dep" OPTION_LINK="$LIB ${PARA_LD}" \
821	OPTIM90="${COMPIL_FFLAGS} ${PARA_FFLAGS}" \
822	OPTIMTRU90="${COMPIL_FFLAGS} ${PARA_FFLAGS}" \
823	OPTIM="${COMPIL_FFLAGS} ${PARA_FFLAGS}" \
824	INCLUDE="$INCLUDE" \
825	$filtre \
826	LIBO=${LIBOGCM}/${nomlib} \
827	"PHYS=$physique" \
828	LIBPHY=${LIBPHY} \
829	LIBPHY_COMMON=${LIBPHY_COMMON} \
830	LIBDYN_PHYS=${LIBDYN_PHYS} \
831	DIM=$dimc \
832	FLAG_PARA=$FLAG_PARA \
833	L_PHY="$lib_phy" \
834	L_DYN_PHY="$libdyn_phy" \
835	L_ADJNT=$adjnt \
836	L_COSP="$lcosp" \
837	L_COSP2="$lcosp2" \
838	L_COSPV2="$lcospv2" \
839	L_CHIMIE="$libchimie" \
840	LOCAL_DIR="$localdir" \
841	F77="$fcompiler" \
842	F90="$fcompiler" \
843	OPLINK="$LIB" \
844	LINK="$linker" \
845	GCM="$LMDGCM" \
846	MOD_LOC_DIR=$mod_loc_dir \
847	MOD_SUFFIX="mod" \
848	AR=$arcommand \
849	ARFLAGS="$arflags" \
850	DIRMAIN=$dirmain \
851	SOURCE=$source_code \
852	PROG=$code
853
854
855	if [[ -r $LIBFGCM/grid/dimensions.h ]]
856	then
857	# Cleanup: remove dimension.h file
858	\rm -f $LIBFGCM/grid/dimensions.h
859	fi

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