source: LMDZ6/trunk/libf/phylmd/regr_horiz_time_climoz_m.F90 @ 5249

Last change on this file since 5249 was 5084, checked in by Laurent Fairhead, 5 months ago

Reverting to r4065. Updating fortran standard broke too much stuff. Will do it by smaller chunks
AB, LF

File size: 32.2 KB
Line 
1MODULE regr_horiz_time_climoz_m
2
3  USE interpolation,     ONLY: locate
4  USE mod_grid_phy_lmdz, ONLY: nbp_lon, nbp_lat, grid_type, unstructured
5  USE nrtype,            ONLY: pi
6  USE netcdf,   ONLY: NF90_CLOBBER, NF90_FLOAT,     NF90_OPEN,   &
7                      NF90_NOWRITE, NF90_NOERR,     NF90_GET_ATT, NF90_GLOBAL
8  USE netcdf95, ONLY: NF95_DEF_DIM, NF95_INQ_DIMID, NF95_INQUIRE_DIMENSION,    &
9       NF95_DEF_VAR, NF95_INQ_VARID, NF95_INQUIRE_VARIABLE, &
10       NF95_OPEN,  NF95_CREATE,  NF95_GET_ATT,   NF95_GW_VAR,  nf95_get_var,  &
11       NF95_CLOSE, NF95_ENDDEF,  NF95_PUT_ATT,   NF95_PUT_VAR, NF95_COPY_ATT
12  USE print_control_mod, ONLY: lunout
13  USE dimphy
14  IMPLICIT NONE
15  PRIVATE
16  PUBLIC :: regr_horiz_time_climoz
17  REAL, PARAMETER :: deg2rad=pi/180.
18  CHARACTER(LEN=13), PARAMETER :: vars_in(2)=['tro3         ','tro3_daylight']
19
20  INTEGER :: nlat_ou, nlon_ou
21  REAL, ALLOCATABLE :: latitude_glo(:)
22!$OMP THREADPRIVATE(latitude_glo)
23  INTEGER, ALLOCATABLE :: ind_cell_glo_glo(:)
24!$OMP THREADPRIVATE(ind_cell_glo_glo)
25
26CONTAINS
27
28!-------------------------------------------------------------------------------
29!
30SUBROUTINE regr_horiz_time_climoz(read_climoz,interpt)
31!
32!-------------------------------------------------------------------------------
33! Purpose: Regrid horizontally and in time zonal or 3D ozone climatologies.
34!   * Read ozone climatology from netcdf file
35!   * Regrid it horizontaly to LMDZ grid (quasi-conservative method)
36!   * If interpt=T, interpolate linearly in time (one record each day)
37!     If interpt=F, keep original time sampling  (14 months).
38!   * Save it to a new netcdf file.
39!-------------------------------------------------------------------------------
40! Remarks:
41!   * Up to 2 variables treated: "tro3" and "tro3_daylight" (if read_climoz=2)
42!   * Input fields coordinates: (longitudes, latitudes, pressure_levels, time)
43!   * Output grid cells centers coordinates given by [rlonv,] rlatu.
44!   * Output grid cells edges   coordinates given by [rlonu,] rlatv.
45!   * Input file [longitudes and] latitudes given in degrees.
46!   * Input file pressure levels are given in Pa or hPa.
47!   * All coordinates variables are stricly monotonic.
48!   * Monthly fields are interpolated linearly in time to get daily values.
49!   * Fields are known at the middle of the months, so interpolation requires an
50!     additional record both for 1st half of january and 2nd half of december:
51!     - For a 14-records "climoz.nc": records 1 and 14.
52!     - For 12-records files:
53!       record 12 of "climoz_m.nc" if available, or record 1  of "climoz.nc".
54!       record 1  of "climoz_p.nc" if available, or record 12 of "climoz.nc".
55!   * Calendar is taken into account to get one record each day (not 360 always).
56!   * Missing values are filled in from sky to ground by copying lowest valid one.
57!     Attribute "missing_value" or "_FillValue" must be present in input file.
58!-------------------------------------------------------------------------------
59  USE assert_m,           ONLY: assert
60  USE cal_tools_m,        ONLY: year_len, mid_month
61!!  USE control_mod,        ONLY: anneeref
62  USE time_phylmdz_mod,   ONLY: annee_ref
63  USE ioipsl,             ONLY: ioget_year_len, ioget_calendar
64  USE regr_conserv_m,     ONLY: regr_conserv
65  USE regr_lint_m,        ONLY: regr_lint
66  USE regular_lonlat_mod, ONLY: boundslon_reg, boundslat_reg, south, west, east
67  USE slopes_m,           ONLY: slopes
68  USE lmdz_xios
69  USE mod_phys_lmdz_para, ONLY: is_mpi_root, is_master, is_omp_master, gather, gather_mpi, bcast_mpi, klon_mpi
70  USE geometry_mod, ONLY : latitude_deg, ind_cell_glo
71  USE mod_grid_phy_lmdz, ONLY: klon_glo
72
73!-------------------------------------------------------------------------------
74! Arguments:
75  INTEGER, INTENT(IN) :: read_climoz ! read ozone climatology, 1 or 2
76!                         1: read a single ozone climatology used day and night
77!                         2: same + read also a daylight climatology
78  LOGICAL, INTENT(IN) :: interpt     ! TRUE  => daily interpolation
79                                     ! FALSE => no interpolation (14 months)
80!-------------------------------------------------------------------------------
81! Local variables:
82
83!--- Input files variables
84  INTEGER :: nlon_in                       ! Number of longitudes
85  INTEGER :: nlat_in                       ! Number of latitudes
86  INTEGER :: nlev_in                       ! Number of pressure levels
87  INTEGER :: nmth_in                       ! Number of months
88  REAL, ALLOCATABLE:: lon_in(:)           ! Longitudes   (ascending order, rad)
89  REAL, ALLOCATABLE:: lat_in(:)           ! Latitudes    (ascending order, rad)
90  REAL, ALLOCATABLE:: lev_in(:)           ! Pressure levels (ascen. order, hPa)
91  REAL, ALLOCATABLE :: lon_in_edge(:)      ! Longitude intervals edges
92                                           !              (ascending order,  / )
93  REAL, ALLOCATABLE :: sinlat_in_edge(:)   ! Sinus of latitude intervals edges
94                                           !              (ascending order,  / )
95  LOGICAL :: ldec_lon, ldec_lat, ldec_lev  ! Decreasing order in input file
96  CHARACTER(LEN=20) :: cal_in              ! Calendar
97  REAL, ALLOCATABLE :: o3_in3(:,:,:,:,:)   ! Ozone climatologies
98  REAL, ALLOCATABLE :: o3_in3bis(:,:,:,:,:)   ! Ozone climatologies
99  REAL, ALLOCATABLE :: o3_in2  (:,:,:,:)   ! Ozone climatologies
100  REAL, ALLOCATABLE :: o3_in2bis(:,:,:,:,:)   ! Ozone climatologies
101  ! last index: 1 for the day-night average, 2 for the daylight field.
102  REAL :: NaN
103
104!--- Partially or totally regridded variables      (:,:,nlev_in,:,read_climoz)
105  REAL, ALLOCATABLE :: o3_regr_lon   (:,:,:,:,:) ! (nlon_ou,nlat_in,:,0:13   ,:)
106  REAL, ALLOCATABLE :: o3_regr_lonlat(:,:,:,:,:) ! (nlon_ou,nlat_ou,:,0:13   ,:)
107  REAL, ALLOCATABLE :: o3_out3       (:,:,:,:,:) ! (nlon_ou,nlat_ou,:,ntim_ou,:)
108  REAL, ALLOCATABLE :: o3_out3_glo   (:,:,:,:) !   (nbp_lat,:,ntim_ou,:)
109  REAL, ALLOCATABLE :: o3_regr_lat     (:,:,:,:) !         (nlat_in,:,0:13   ,:)
110  REAL, ALLOCATABLE :: o3_out2         (:,:,:,:) !         (nlat_ou,:,ntim_ou,:)
111  REAL, ALLOCATABLE :: o3_out2_glo     (:,:,:,:) !         (nbp_lat,:,ntim_ou,:)
112  REAL, ALLOCATABLE :: o3_out          (:,:,:,:) !         (nbp_lat,:,ntim_ou,:)
113! Dimension number  | Interval                | Contains  | For variables:
114!   1 (longitude)   | [rlonu(i-1), rlonu(i)]  | rlonv(i)  | all
115!   2 (latitude)    | [rlatv(j), rlatv(j-1)]  | rlatu(j)  | all but o3_regr_lon
116!   3 (press level) |                         |   lev(k)  | all
117! Note that rlatv(0)=pi/2 and rlatv(nlat_ou)=-pi/2.
118! Dimension 4 is: month number                             (all vars but o3_out)
119!                 days elapsed since Jan. 1st 0h at mid-day (o3_out only)
120  REAL, ALLOCATABLE :: v1(:)
121
122!--- For NetCDF:
123  INTEGER :: fID_in_m, fID_in, levID_ou, dimid, vID_in(read_climoz), ntim_ou
124  INTEGER :: fID_in_p, fID_ou, timID_ou, varid, vID_ou(read_climoz), ndims, ncerr
125  INTEGER, ALLOCATABLE :: dIDs(:)
126  CHARACTER(LEN=20) :: cal_ou     !--- Calendar; no time inter => same as input
127  CHARACTER(LEN=80) :: press_unit !--- Pressure unit
128  REAL    :: tmidmonth(0:13)      !--- Elapsed days since Jan-1 0h at mid-months
129                                  ! Additional records 0, 13 for interpolation
130  REAL, ALLOCATABLE :: tmidday(:) !--- Output times (mid-days since Jan 1st 0h)
131  LOGICAL :: lprev, lnext         !--- Flags: previous/next files are present
132  LOGICAL :: l3D, l2D             !--- Flag:  input fields are 3D or zonal
133  INTEGER :: ii, i, j, k, l, m, dln, ib, ie, iv, dx1, dx2
134  INTEGER, ALLOCATABLE :: sta(:), cnt(:)
135  CHARACTER(LEN=80) :: sub, dim_nam, msg
136  REAL :: null_array(0)
137  LOGICAL,SAVE :: first=.TRUE.
138!$OMP THREADPRIVATE(first) 
139  REAL, ALLOCATABLE :: test_o3_in(:,:)
140  REAL, ALLOCATABLE :: test_o3_out(:)
141
142
143  IF (grid_type==unstructured) THEN
144    IF (first) THEN
145      IF (is_master) THEN
146        ALLOCATE(latitude_glo(klon_glo))
147        ALLOCATE(ind_cell_glo_glo(klon_glo))
148      ELSE
149        ALLOCATE(latitude_glo(0))
150        ALLOCATE(ind_cell_glo_glo(0))
151      ENDIF
152      CALL gather(latitude_deg,  latitude_glo)
153      CALL gather(ind_cell_glo,  ind_cell_glo_glo)
154    ENDIF
155  ENDIF
156   
157  IF (is_omp_master) THEN
158    nlat_ou=nbp_lat
159    nlon_ou=nbp_lon
160   
161   !-------------------------------------------------------------------------------
162    IF (is_mpi_root) THEN
163      sub="regr_horiz_time_climoz"
164      WRITE(lunout,*)"Call sequence information: "//TRIM(sub)
165      CALL assert(read_climoz == 1 .OR. read_climoz == 2, "regr_lat_time_climoz")
166
167      CALL  NF95_OPEN("climoz.nc"  , NF90_NOWRITE, fID_in)
168      lprev=NF90_OPEN("climoz_m.nc", NF90_NOWRITE, fID_in_m)==NF90_NOERR
169      lnext=NF90_OPEN("climoz_p.nc", NF90_NOWRITE, fID_in_p)==NF90_NOERR
170
171      !--- Get coordinates from the input file. Converts lon/lat in radians.
172      !    Few inversions because "regr_conserv" and gcm need ascending vectors.
173      CALL NF95_INQ_VARID(fID_in, vars_in(1), varid)
174      CALL NF95_INQUIRE_VARIABLE(fID_in, varid, dimids=dIDs, ndims=ndims)
175      l3D=ndims==4; l2D=ndims==3
176      IF(l3D) WRITE(lunout,*)"Input files contain full 3D ozone fields."
177      IF(l2D) WRITE(lunout,*)"Input files contain zonal 2D ozone fields."
178      DO i=1,ndims
179        CALL NF95_INQUIRE_DIMENSION(fID_in, dIDs(i), name=dim_nam, nclen=dln)
180        CALL NF95_INQ_VARID(fID_in, dim_nam, varid)
181        ii=i; IF(l2D) ii=i+1                              !--- ndims==3:NO LONGITUDE
182        SELECT CASE(ii)
183          CASE(1)                                         !--- LONGITUDE
184            CALL NF95_GW_VAR(fID_in, varid, lon_in)
185            ldec_lon=lon_in(1)>lon_in(dln); IF(ldec_lon) lon_in=lon_in(dln:1:-1)
186            nlon_in=dln; lon_in=lon_in*deg2rad
187          CASE(2)                                         !--- LATITUDE
188            CALL NF95_GW_VAR(fID_in, varid, lat_in)
189            ldec_lat=lat_in(1)>lat_in(dln); IF(ldec_lat) lat_in=lat_in(dln:1:-1)
190            nlat_in=dln; lat_in=lat_in*deg2rad
191          CASE(3)                                         !--- PRESSURE LEVELS
192            CALL NF95_GW_VAR(fID_in, varid, lev_in)
193            ldec_lev=lev_in(1)>lev_in(dln); IF(ldec_lev) lev_in=lev_in(dln:1:-1)
194            nlev_in=dln
195            CALL NF95_GET_ATT(fID_in, varid, "units", press_unit)
196            k=LEN_TRIM(press_unit)
197            DO WHILE(ICHAR(press_unit(k:k))==0)
198              press_unit(k:k)=' '; k=LEN_TRIM(press_unit) !--- REMOVE NULL END CHAR
199            END DO
200            IF(press_unit ==  "Pa") THEN
201              lev_in = lev_in/100.                        !--- CONVERT TO hPa
202            ELSE IF(press_unit /= "hPa") THEN
203              CALL abort_physic(sub, "the only recognized units are Pa and hPa.",1)
204            END IF
205          CASE(4)                                         !--- TIME
206            CALL NF95_INQUIRE_DIMENSION(fID_in, dIDs(i), nclen=nmth_in)
207            cal_in='gregorian'
208            IF(NF90_GET_ATT(fID_in, varid, 'calendar', cal_in)/=NF90_NOERR)        & 
209            WRITE(lunout,*)'WARNING: missing "calendar" attribute for "'//       &
210            TRIM(dim_nam)//'" in "climoz.nc". Choosing default: "gregorian".'
211            k=LEN_TRIM(cal_in)
212            DO WHILE(ICHAR(cal_in(k:k))==0)
213              cal_in(k:k)=' '; k=LEN_TRIM(cal_in)         !--- REMOVE NULL END CHAR
214            END DO
215        END SELECT
216      END DO
217
218      !--- Prepare quantities for time interpolation
219      tmidmonth=mid_month(annee_ref, cal_in)
220      IF(interpt) THEN
221        ntim_ou=ioget_year_len(annee_ref)
222        ALLOCATE(tmidday(ntim_ou))
223        tmidday=[(REAL(k)-0.5,k=1,ntim_ou)]
224        CALL ioget_calendar(cal_ou)
225      ELSE
226        ntim_ou=14
227        cal_ou=cal_in
228      END IF
229    ENDIF
230
231    IF (grid_type==unstructured) THEN
232      CALL bcast_mpi(nlon_in)
233      CALL bcast_mpi(nlat_in)
234      CALL bcast_mpi(nlev_in)
235      CALL bcast_mpi(l3d)
236      CALL bcast_mpi(tmidmonth)
237      IF(interpt) CALL bcast_mpi(tmidday)
238      CALL bcast_mpi(ntim_ou)
239
240      IF (is_mpi_root) THEN
241        CALL xios_set_domain_attr("domain_climoz",nj_glo=nlat_in, nj=nlat_in, jbegin=0, latvalue_1d=lat_in/deg2rad)
242        IF (l3D) THEN
243          CALL xios_set_domain_attr("domain_climoz",ni_glo=nlon_in, ni=nlon_in, ibegin=0, lonvalue_1d=lon_in/deg2rad)
244        ELSE
245          CALL xios_set_domain_attr("domain_climoz",ni_glo=8, ni=8, ibegin=0, lonvalue_1d = (/ 0.,45.,90.,135.,180.,225.,270., 315. /))
246        ENDIF
247      ELSE
248        CALL xios_set_domain_attr("domain_climoz",nj_glo=nlat_in, nj=0, jbegin=0, latvalue_1d=null_array )
249        IF (l3D) THEN
250          CALL xios_set_domain_attr("domain_climoz",ni_glo=nlon_in, ni=0, ibegin=0, lonvalue_1d=null_array)
251        ELSE
252          CALL xios_set_domain_attr("domain_climoz",ni_glo=8, ni=0, ibegin=0, lonvalue_1d=null_array)
253        ENDIF
254      ENDIF
255      CALL  xios_set_axis_attr("axis_climoz", n_glo=nlev_in)
256      CALL  xios_set_axis_attr("time_axis_climoz", n_glo=ntim_ou)
257      CALL  xios_set_axis_attr("time_axis_climoz", n_glo=ntim_ou)
258      CALL  xios_set_axis_attr("tr_climoz", n_glo=read_climoz)
259      CALL  xios_set_field_attr("tro3_out", enabled=.TRUE.)
260      CALL  xios_set_field_attr("tro3_out", enabled=.TRUE.)
261     
262      IF (first) THEN
263        first=.FALSE.
264        RETURN
265      ENDIF
266    ENDIF
267   
268   
269    IF (is_mpi_root) THEN     
270      !--- Longitudes management:
271      !    * Need to shift data if the origin of input file longitudes /= -pi
272      !    * Need to add some margin in longitude to ensure input interval contains
273      !      all the output intervals => at least one longitudes slice has to be
274      !      duplicated, possibly more for undersampling.
275      IF(l3D) THEN
276        IF (grid_type==unstructured) THEN
277          dx2=0
278        ELSE
279          !--- Compute input edges longitudes vector (no end point yet)
280          ALLOCATE(v1(nlon_in+1))
281          v1(1)=(lon_in(nlon_in)+lon_in(1))/2.-pi
282          FORALL(i=2:nlon_in) v1(i)=(lon_in(i-1)+lon_in(i))/2.
283          v1(nlon_in+1)=v1(1)+2.*pi
284          DEALLOCATE(lon_in)
285
286          !--- Shift input longitudes vector until it contains first output point boundslon_reg(1,west)
287          v1=v1+2*pi*REAL(FLOOR((boundslon_reg(1,west)-v1(1))/(2.*pi)))
288
289          !--- Ensure first input longitudes interval contains first output point boundslon_reg(1,west)
290          dx1=locate(v1,boundslon_reg(1,west))-1
291          v1=CSHIFT(v1,SHIFT=dx1,DIM=1)
292          v1(nlon_in-dx1+2:)=v1(nlon_in-dx1+2:)+2.*pi
293   
294          !--- Extend input longitudes vector until last interval contains boundslon_reg(nlat_ou,east)
295          dx2=0; DO WHILE(v1(1+dx2)+2.*pi<=boundslon_reg(nlon_ou,east)); dx2=dx2+1; END DO
296
297          !--- Final edges longitudes vector (with margin and end point)
298          ALLOCATE(lon_in_edge(nlon_in+dx2+1)); lon_in_edge=[v1,v1(2:1+dx2)+2.*pi]
299          DEALLOCATE(v1)
300        ENDIF
301      END IF
302
303      !--- Compute sinus of intervals edges latitudes:
304      ALLOCATE(sinlat_in_edge(nlat_in+1))
305      sinlat_in_edge(1) = -1. ; sinlat_in_edge(nlat_in+1) = 1.
306      FORALL(j=2:nlat_in) sinlat_in_edge(j)=SIN((lat_in(j-1)+lat_in(j))/2.)
307      DEALLOCATE(lat_in)
308
309
310
311      !--- Check for contiguous years:
312      ib=0; ie=13
313      IF(nmth_in == 14) THEN; lprev=.FALSE.; lnext=.FALSE.
314        WRITE(lunout,*)'Using 14 months ozone climatology "climoz.nc"...'
315      ELSE 
316        IF(     lprev) WRITE(lunout,*)'Using "climoz_m.nc" last record (previous year).'
317        IF(.NOT.lprev) WRITE(lunout,*)"No previous year file ; assuming periodicity."
318        IF(     lnext) WRITE(lunout,*)'Using "climoz_p.nc" first record (next year).'
319        IF(.NOT.lnext) WRITE(lunout,*)"No next year file ; assuming periodicity."
320        IF(.NOT.lprev) ib=1
321        IF(.NOT.lnext) ie=12
322      END IF
323      ALLOCATE(sta(ndims),cnt(ndims)); sta(:)=1 
324      IF(l3D) cnt=[nlon_in,nlat_in,nlev_in,1]
325      IF(l2D) cnt=[        nlat_in,nlev_in,1] 
326      IF(l3D) ALLOCATE(o3_in3(nlon_in+dx2,nlat_in,nlev_in,ib:ie,read_climoz))
327      IF(l2D) ALLOCATE(o3_in2(            nlat_in,nlev_in,ib:ie,read_climoz))
328
329      !--- Read full current file and one record each available contiguous file
330      DO iv=1,read_climoz
331        CALL NF95_INQ_VARID(fID_in, vars_in(1), vID_in(iv))
332        IF(l3D) call NF95_GET_VAR(fID_in, vID_in(iv), o3_in3(1:nlon_in,:,:,1:12,iv))
333        IF(l2D) call NF95_GET_VAR(fID_in, vID_in(iv), o3_in2(          :,:,1:12,iv))
334        IF(lprev) THEN; sta(ndims)=12 
335          CALL NF95_INQ_VARID(fID_in_m, vars_in(1), vID_in(iv))
336          IF(l3D) call NF95_GET_VAR(fID_in_m,vID_in(iv),o3_in3(1:nlon_in,:,:, 0,iv),sta,cnt)
337          IF(l2d) call NF95_GET_VAR(fID_in_m,vID_in(iv),o3_in2(          :,:, 0,iv),sta,cnt)
338        END IF
339        IF(lnext) THEN; sta(ndims)=1 
340          CALL NF95_INQ_VARID(fID_in_p, vars_in(1), vID_in(iv))
341          IF(l3D) call NF95_GET_VAR(fID_in_p,vID_in(iv),o3_in3(1:nlon_in,:,:,13,iv),sta,cnt)
342          IF(l2D) call NF95_GET_VAR(fID_in_p,vID_in(iv),o3_in2(          :,:,13,iv),sta,cnt)
343        END IF
344      END DO
345      IF(lprev.OR.lnext) DEALLOCATE(sta,cnt)
346      IF(lprev) CALL NF95_CLOSE(fID_in_m)
347      IF(lnext) CALL NF95_CLOSE(fID_in_p)
348
349      !--- Revert decreasing coordinates vector
350      IF(l3D) THEN
351        IF(ldec_lon) o3_in3(1:nlon_in,:,:,:,:) = o3_in3(nlon_in:1:-1,:,:,:,:)
352        IF(ldec_lat) o3_in3 = o3_in3(:,nlat_in:1:-1,:,:,:)
353        IF(ldec_lev) o3_in3 = o3_in3(:,:,nlev_in:1:-1,:,:)
354       
355        IF (grid_type /= unstructured) THEN
356          !--- Shift values for longitude and duplicate some longitudes slices
357          o3_in3(1:nlon_in,:,:,:,:)=CSHIFT(o3_in3(1:nlon_in,:,:,:,:),SHIFT=dx1,DIM=1)
358          o3_in3(nlon_in+1:nlon_in+dx2,:,:,:,:)=o3_in3(1:dx2,:,:,:,:)
359        ENDIF
360      ELSE
361        IF(ldec_lat) o3_in2 = o3_in2(  nlat_in:1:-1,:,:,:)
362        IF(ldec_lev) o3_in2 = o3_in2(  :,nlev_in:1:-1,:,:)
363      END IF
364
365     !--- Deal with missing values
366      DO m=1, read_climoz
367        WRITE(msg,'(a,i0)')"regr_lat_time_climoz: field Nr.",m
368        IF(NF90_GET_ATT(fID_in,vID_in(m),"missing_value",NaN)/= NF90_NOERR) THEN
369          IF(NF90_GET_ATT(fID_in, vID_in(m),"_FillValue",NaN)/= NF90_NOERR) THEN
370            WRITE(lunout,*)TRIM(msg)//": no missing value attribute found."; CYCLE
371          END IF
372        END IF
373        WRITE(lunout,*)TRIM(msg)//": missing value attribute found."
374        WRITE(lunout,*)"Trying to fill in NaNs ; a full field would be better."
375
376        !--- Check top layer contains no NaNs & search NaNs from top to ground
377        msg=TRIM(sub)//": NaNs in top layer !"
378        IF(l3D) THEN
379          IF(ANY(o3_in3(:,:,1,:,m)==NaN)) CALL abort_physic(sub,msg,1)
380          DO k = 2,nlev_in
381            WHERE(o3_in3(:,:,k,:,m)==NaN) o3_in3(:,:,k,:,m)=o3_in3(:,:,k-1,:,m)
382          END DO
383        ELSE
384          IF(ANY(o3_in2(  :,1,:,m)==NaN)) THEN
385            WRITE(lunout,*)msg
386            !--- Fill in latitudes where all values are missing
387            DO l=1,nmth_in
388              !--- Next to south pole
389              j=1;       DO WHILE(o3_in2(j,1,l,m)==NaN); j=j+1; END DO
390              IF(j>1) &
391                o3_in2(:j-1,:,l,m)=SPREAD(o3_in2(j,:,l,m),DIM=1,ncopies=j-1)
392              !--- Next to north pole
393              j=nlat_in; DO WHILE(o3_in2(j,1,l,m)==NaN); j=j+1; END DO
394              IF(j<nlat_in) &
395                o3_in2(j+1:,:,l,m)=SPREAD(o3_in2(j,:,l,m),DIM=1,ncopies=nlat_in-j)
396            END DO
397          END IF
398
399          !--- Fill in high latitudes missing values
400          !--- Highest level been filled-in, so has always valid values.
401          DO k = 2,nlev_in
402            WHERE(o3_in2(:,k,:,m)==NaN) o3_in2(:,k,:,m)=o3_in2(:,k-1,:,m)
403          END DO
404        END IF
405      END DO
406
407    ENDIF
408   
409    !=============================================================================
410    IF(l3D) THEN                                                   !=== 3D FIELDS
411    !=============================================================================
412     IF (grid_type==unstructured) THEN
413       nlat_ou=klon_mpi
414       
415       IF (is_mpi_root) THEN
416         ALLOCATE(o3_in3bis(nlon_in,nlat_in,nlev_in,0:13,read_climoz))
417         o3_in3bis(:,:,:,ib:ie,:)=o3_in3(1:nlon_in,:,:,ib:ie,:)
418       ELSE
419         ALLOCATE(o3_in3bis(0,0,0,0,read_climoz))
420       ENDIF
421       ALLOCATE(o3_regr_lonlat(1, nlat_ou, nlev_in, 0:13, read_climoz))
422       
423       CALL xios_send_field("tro3_in",o3_in3bis(:,:,:,:,:))
424       CALL xios_recv_field("tro3_out",o3_regr_lonlat(1,:,:,:,:))
425     ELSE
426         
427       !--- Regrid in longitude
428        ALLOCATE(o3_regr_lon(nlon_ou, nlat_in, nlev_in, ie-ib+1, read_climoz))
429        CALL regr_conserv(1, o3_in3, xs = lon_in_edge,                             &
430                            xt = [boundslon_reg(1,west),boundslon_reg(:,east)],    &
431                            vt = o3_regr_lon, slope = slopes(1,o3_in3, lon_in_edge))
432        DEALLOCATE(o3_in3)
433
434        !--- Regrid in latitude: averaging with respect to SIN(lat) is
435        !                        equivalent to weighting by COS(lat)
436        !--- (inverted indices in "o3_regr_lonlat" because "rlatu" is decreasing)
437        ALLOCATE(o3_regr_lonlat(nlon_ou, nlat_ou, nlev_in, 0:13, read_climoz))
438        CALL regr_conserv(2, o3_regr_lon, xs = sinlat_in_edge,                     &
439                        xt = [- 1., SIN(boundslat_reg(nlat_ou-1:1:-1,south)), 1.], &
440                        vt = o3_regr_lonlat(:,nlat_ou:1:- 1,:,ib:ie,:),            &
441                   slope = slopes(2,o3_regr_lon, sinlat_in_edge))
442        DEALLOCATE(o3_regr_lon)
443
444     ENDIF
445
446     !--- Duplicate previous/next record(s) if they are not available
447     IF(.NOT.lprev) o3_regr_lonlat(:,:,:, 0,:) = o3_regr_lonlat(:,:,:,12,:)
448     IF(.NOT.lnext) o3_regr_lonlat(:,:,:,13,:) = o3_regr_lonlat(:,:,:, 1,:)
449     
450     !--- Regrid in time by linear interpolation:
451     ALLOCATE(o3_out3(nlon_ou, nlat_ou, nlev_in, ntim_ou, read_climoz))
452     IF(     interpt) CALL regr_lint(4,o3_regr_lonlat,tmidmonth,tmidday,o3_out3)
453     IF(.NOT.interpt) o3_out3=o3_regr_lonlat
454     DEALLOCATE(o3_regr_lonlat)
455
456     nlat_ou=nbp_lat
457     IF (grid_type==unstructured) THEN
458       CALL xios_send_field('o3_out',o3_out3)
459       ndims=3
460       ALLOCATE(o3_out3_glo(nlat_ou, nlev_in, ntim_ou, read_climoz))
461       CALL gather_mpi(o3_out3(1,:,:,:,:), o3_out3_glo)
462     ENDIF
463
464    !--- Create the output file and get the variable IDs:
465    CALL prepare_out(fID_in,nlev_in,ntim_ou, fID_ou,levID_ou,timID_ou,vID_ou, &
466                     ndims, cal_ou)
467
468    IF (is_mpi_root) THEN
469      !--- Write remaining coordinate variables:
470      CALL NF95_PUT_VAR(fID_ou, levID_ou, lev_in); DEALLOCATE(lev_in)
471      IF(     interpt) CALL NF95_PUT_VAR(fID_ou, timID_ou, tmidday)
472      IF(.NOT.interpt) CALL NF95_PUT_VAR(fID_ou, timID_ou, tmidmonth)
473
474      !--- Write to file (the order of "rlatu" is inverted in the output file):
475        IF (grid_type==unstructured) THEN
476
477          ALLOCATE(o3_out(nlat_ou, nlev_in, ntim_ou, read_climoz))
478          DO i=1,klon_glo
479            o3_out(ind_cell_glo_glo(i),:,:,:)=o3_out3_glo(i,:,:,:)
480          ENDDO
481
482          DO m = 1, read_climoz
483            CALL NF95_PUT_VAR(fID_ou, vID_ou(m), o3_out(nlat_ou:1:-1,:,:,m))
484          END DO
485         
486        ELSE
487          DO m = 1, read_climoz
488            CALL NF95_PUT_VAR(fID_ou, vID_ou(m), o3_out3(:,nlat_ou:1:-1,:,:,m))
489          END DO
490      ENDIF
491      CALL NF95_CLOSE(fID_ou)
492
493
494    ENDIF
495
496
497    !=============================================================================
498    ELSE                                                         !=== ZONAL FIELDS
499    !=============================================================================
500   
501     IF (grid_type==unstructured) THEN
502       nlat_ou=klon_mpi
503
504       IF (is_mpi_root) THEN
505         ALLOCATE(o3_in2bis(8,nlat_in,nlev_in,0:13,read_climoz))
506         o3_in2bis(:,:,:,ib:ie,:)=SPREAD(o3_in2,1,8)
507       ELSE
508         ALLOCATE(o3_in2bis(0,0,0,0,read_climoz))
509       ENDIF
510       ALLOCATE(o3_regr_lat(nlat_ou, nlev_in, 0:13, read_climoz))
511       CALL xios_send_field("tro3_in",o3_in2bis(:,:,:,:,:))
512       CALL xios_recv_field("tro3_out",o3_regr_lat(:,:,:,:))
513       IF(.NOT.lprev) o3_regr_lat(:,:, 0, :) = o3_regr_lat(:,:,12,:)
514       IF(.NOT.lnext) o3_regr_lat(:,:,13, :) = o3_regr_lat(:,:, 1,:)
515     
516     ELSE
517        !--- Regrid in latitude: averaging with respect to SIN(lat) is
518        !                        equivalent to weighting by COS(lat)
519        !--- (inverted indices in "o3_regr_lat" because "rlatu" is decreasing)
520        ALLOCATE(o3_regr_lat(nlat_ou, nlev_in, 0:13, read_climoz))
521        CALL regr_conserv(1, o3_in2, xs = sinlat_in_edge,                          &
522                        xt = [- 1., SIN(boundslat_reg(nlat_ou-1:1:-1,south)), 1.], &
523                        vt = o3_regr_lat(nlat_ou:1:- 1,:,ib:ie,:),                 &
524                     slope = slopes(1,o3_in2, sinlat_in_edge))
525        DEALLOCATE(o3_in2)
526
527        !--- Duplicate previous/next record(s) if they are not available
528        IF(.NOT.lprev) o3_regr_lat(:,:, 0,:) = o3_regr_lat(:,:,12,:)
529        IF(.NOT.lnext) o3_regr_lat(:,:,13,:) = o3_regr_lat(:,:, 1,:)
530
531     ENDIF
532     
533      !--- Regrid in time by linear interpolation:
534      ALLOCATE(o3_out2(nlat_ou, nlev_in, ntim_ou, read_climoz))
535      IF(     interpt) CALL regr_lint(3,o3_regr_lat, tmidmonth, tmidday, o3_out2)
536      IF(.NOT.interpt) o3_out2=o3_regr_lat
537      DEALLOCATE(o3_regr_lat)
538
539      nlat_ou=nbp_lat
540   
541      IF (grid_type==unstructured) THEN
542        ndims=3
543        ALLOCATE(o3_out2_glo(nlat_ou, nlev_in, ntim_ou, read_climoz))
544        CALL gather_mpi(o3_out2, o3_out2_glo)
545      ENDIF
546     
547      !--- Create the output file and get the variable IDs:
548      CALL prepare_out(fID_in,nlev_in,ntim_ou, fID_ou,levID_ou,timID_ou,vID_ou, &
549                         ndims, cal_ou)
550
551      IF (is_mpi_root) THEN
552     
553        !--- Write remaining coordinate variables:
554        CALL NF95_PUT_VAR(fID_ou, levID_ou, lev_in); DEALLOCATE(lev_in)
555        IF(     interpt) CALL NF95_PUT_VAR(fID_ou, timID_ou, tmidday)
556        IF(.NOT.interpt) CALL NF95_PUT_VAR(fID_ou, timID_ou, tmidmonth)
557
558        IF (grid_type==unstructured) THEN
559
560          ALLOCATE(o3_out3_glo(nlat_ou, nlev_in, ntim_ou, read_climoz))
561          DO i=1,klon_glo
562            o3_out(ind_cell_glo_glo(i),:,:,:)=o3_out2_glo(i,:,:,:)
563          ENDDO
564
565
566          DO m = 1, read_climoz
567            CALL NF95_PUT_VAR(fID_ou, vID_ou(m), o3_out(nlat_ou:1:-1,:,:,m))
568          END DO
569        ELSE
570          !--- Write to file (the order of "rlatu" is inverted in the output file):
571          DO m = 1, read_climoz
572            CALL NF95_PUT_VAR(fID_ou, vID_ou(m), o3_out2(nlat_ou:1:-1,:,:,m))
573          END DO
574        ENDIF
575       
576        CALL NF95_CLOSE(fID_ou)
577     
578      ENDIF
579
580    !=============================================================================
581    END IF
582    !=============================================================================
583
584    IF (is_mpi_root) CALL NF95_CLOSE(fID_in)
585
586  ENDIF ! is_omp_master
587
588  first=.FALSE.
589END SUBROUTINE regr_horiz_time_climoz
590!
591!-------------------------------------------------------------------------------
592
593
594!-------------------------------------------------------------------------------
595!
596SUBROUTINE prepare_out(fID_in, nlev_in, ntim_ou, fID_ou, vlevID, vtimID, &
597                       vID_ou, ndims, cal_ou)
598!-------------------------------------------------------------------------------
599! Purpose:  This subroutine creates the NetCDF output file, defines
600!     dimensions and variables, and writes some of the coordinate variables.
601!-------------------------------------------------------------------------------
602  USE regular_lonlat_mod, ONLY: lon_reg, lat_reg
603  USE regular_lonlat_mod, ONLY: lon_reg, lat_reg
604  USE mod_phys_lmdz_para, ONLY: is_mpi_root
605  USE mod_grid_phy_lmdz, ONLY: klon_glo
606!
607!-------------------------------------------------------------------------------
608! Arguments:
609  INTEGER, INTENT(IN)  :: fID_in, nlev_in, ntim_ou
610  INTEGER, INTENT(OUT) :: fID_ou, vlevID,  vtimID
611  INTEGER, INTENT(OUT) :: vID_ou(:)      ! dim(1/2) 1: O3day&night 2: O3daylight
612  INTEGER, INTENT(IN)  :: ndims          ! fields rank (3 or 4)
613  CHARACTER(LEN=*), INTENT(IN) :: cal_ou ! calendar
614!-------------------------------------------------------------------------------
615! Local variables:
616  INTEGER :: dlonID, dlatID, dlevID, dtimID, dIDs(4)
617  INTEGER :: vlonID, vlatID, ncerr,  is
618  REAL,ALLOCATABLE    :: latitude_glo_(:)
619  CHARACTER(LEN=80) :: sub
620  INTEGER :: i
621
622
623!-------------------------------------------------------------------------------
624 
625  IF (is_mpi_root) THEN 
626    sub="prepare_out"
627    WRITE(lunout,*)"CALL sequence information: "//TRIM(sub)
628    CALL NF95_CREATE("climoz_LMDZ.nc", NF90_clobber, fID_ou)
629
630  !--- Dimensions:
631    IF(ndims==4) &
632    CALL NF95_DEF_DIM(fID_ou, "rlonv", nlon_ou, dlonID)
633    CALL NF95_DEF_DIM(fID_ou, "rlatu", nlat_ou, dlatID)
634    CALL NF95_DEF_DIM(fID_ou, "plev",  nlev_in, dlevID)
635    CALL NF95_DEF_DIM(fID_ou, "time",  ntim_ou, dtimID)
636
637    !--- Define coordinate variables:
638    IF(ndims==4) &
639    CALL NF95_DEF_VAR(fID_ou, "rlonv", NF90_FLOAT, dlonID, vlonID)
640    CALL NF95_DEF_VAR(fID_ou, "rlatu", NF90_FLOAT, dlatID, vlatID)
641    CALL NF95_DEF_VAR(fID_ou, "plev",  NF90_FLOAT, dlevID, vlevID)
642    CALL NF95_DEF_VAR(fID_ou, "time",  NF90_FLOAT, dtimID, vtimID)
643    IF(ndims==4) &
644    CALL NF95_PUT_ATT(fID_ou, vlonID, "units", "degrees_east")
645    CALL NF95_PUT_ATT(fID_ou, vlatID, "units", "degrees_north")
646    CALL NF95_PUT_ATT(fID_ou, vlevID, "units", "millibar")
647    CALL NF95_PUT_ATT(fID_ou, vtimID, "units", "days since 2000-1-1")
648    IF(ndims==4) &
649    CALL NF95_PUT_ATT(fID_ou, vlonID, "standard_name", "longitude")
650    CALL NF95_PUT_ATT(fID_ou, vlatID, "standard_name", "latitude")
651    CALL NF95_PUT_ATT(fID_ou, vlevID, "standard_name", "air_pressure")
652    CALL NF95_PUT_ATT(fID_ou, vtimID, "standard_name", "time")
653    CALL NF95_PUT_ATT(fID_ou, vlevID, "long_name",     "air pressure")
654    CALL NF95_PUT_ATT(fID_ou, vtimID, "calendar",      cal_ou)
655
656  !--- Define the main variables:
657    IF(ndims==3) dIDs(1:3) = [ dlatID, dlevID, dtimID]
658    IF(ndims==4) dIDs=[dlonID, dlatID, dlevID, dtimID]
659    CALL NF95_DEF_VAR(fID_ou, vars_in(1), NF90_FLOAT, dIDs(1:ndims), vID_ou(1))
660    CALL NF95_PUT_ATT(fID_ou, vID_ou(1), "long_name", "ozone mole fraction")
661    CALL NF95_PUT_ATT(fID_ou, vID_ou(1), "standard_name", "mole_fraction_of_ozone&
662      &_in_air")
663    IF(SIZE(vID_ou) == 2) THEN
664      CALL NF95_DEF_VAR(fID_ou, vars_in(2), NF90_FLOAT, dIDs(1:ndims), vID_ou(2))
665      CALL NF95_PUT_ATT(fID_ou, vID_ou(2), "long_name","ozone mole fraction in da&
666        &ylight")
667    END IF
668
669  !--- Global attributes:
670  ! The following commands, copying attributes, may fail. That is OK.
671  ! It should just mean that the attribute is not defined in the input file.
672    CALL NF95_COPY_ATT(fID_in,NF90_GLOBAL,"Conventions",fID_ou,NF90_GLOBAL, ncerr)
673    CALL handle_err_copy_att("Conventions")
674    CALL NF95_COPY_ATT(fID_in,NF90_GLOBAL,"title",      fID_ou,NF90_GLOBAL, ncerr)
675    CALL handle_err_copy_att("title")
676    CALL NF95_COPY_ATT(fID_in,NF90_GLOBAL,"institution",fID_ou,NF90_GLOBAL, ncerr)
677    CALL handle_err_copy_att("institution")
678    CALL NF95_COPY_ATT(fID_in,NF90_GLOBAL,"source",     fID_ou,NF90_GLOBAL, ncerr)
679    CALL handle_err_copy_att("source")
680    CALL NF95_PUT_ATT (fID_ou,NF90_GLOBAL,"comment", "Regridded for LMDZ")
681    CALL NF95_ENDDEF(fID_ou)
682
683    IF (grid_type==unstructured) THEN
684      ALLOCATE(latitude_glo_(klon_glo))
685      DO i=1,klon_glo
686        latitude_glo_(ind_cell_glo_glo(i))=latitude_glo(i)
687      ENDDO
688      CALL NF95_PUT_VAR(fID_ou, vlatID, latitude_glo_)
689    ELSE
690      !--- Write one of the coordinate variables:
691      IF(ndims==4) CALL NF95_PUT_VAR(fID_ou, vlonID, lon_reg/deg2rad)
692      CALL NF95_PUT_VAR(fID_ou, vlatID, lat_reg(nlat_ou:1:-1)/deg2rad)
693    !    (convert from rad to degrees and sort in ascending order)
694    ENDIF
695  ENDIF
696 
697CONTAINS
698
699!-------------------------------------------------------------------------------
700!
701SUBROUTINE handle_err_copy_att(att_name)
702!
703!-------------------------------------------------------------------------------
704  USE netcdf, ONLY: NF90_NOERR, NF90_strerror
705!-------------------------------------------------------------------------------
706! Arguments:
707  CHARACTER(LEN=*), INTENT(IN) :: att_name
708!-------------------------------------------------------------------------------
709  IF(ncerr /= NF90_NOERR) &
710    WRITE(lunout,*)TRIM(sub)//" prepare_out NF95_COPY_ATT "//TRIM(att_name)//  &
711                      " -- "//TRIM(NF90_strerror(ncerr))
712
713END SUBROUTINE handle_err_copy_att
714!
715!-------------------------------------------------------------------------------
716
717END SUBROUTINE prepare_out
718!
719!-------------------------------------------------------------------------------
720
721END MODULE regr_horiz_time_climoz_m
722!
723!-------------------------------------------------------------------------------
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