source: LMDZ6/trunk/libf/phylmd/ecrad/radiation/radiation_save.F90 @ 5229

Last change on this file since 5229 was 4853, checked in by idelkadi, 8 months ago

Ecrad update in LMDZ / Implementation of Ecrad double call in LMDZ

  • version 1.6.1 (commit 210d7911380f53a788c3cad73b3cf9b4e022ef87)
  • interface routines between lmdz and ecrad grouped in a new "lmdz" directory
  • double call method redesigned so as to go through the Ecrad initialization and configuration part only once for the entire simulation
  • clean-up in the read.F routine: delete unitules arguments
  • modification of default gas model in namelist (default: ECCKD)
File size: 63.5 KB
Line 
1! radiation_save.F90 - Save data to NetCDF files
2!
3! (C) Copyright 2014- ECMWF.
4!
5! This software is licensed under the terms of the Apache Licence Version 2.0
6! which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.
7!
8! In applying this licence, ECMWF does not waive the privileges and immunities
9! granted to it by virtue of its status as an intergovernmental organisation
10! nor does it submit to any jurisdiction.
11!
12! Author:  Robin Hogan
13! Email:   r.j.hogan@ecmwf.int
14!
15! Modifications
16!   2017-04-22  R. Hogan  Adapt for new way of describing longwave properties
17!   2019-01-02  R. Hogan  Only save cloud properties if do_clouds==.true.
18
19module radiation_save
20
21  use parkind1, only : jprb
22
23  implicit none
24
25  ! Save final fluxes and save intermediate radiative properties
26  public :: save_fluxes, save_radiative_properties, save_inputs
27  ! Save net fluxes IFS style, where upwelling fluxes are actually net down
28  public :: save_net_fluxes
29
30contains
31
32  !---------------------------------------------------------------------
33  ! Save fluxes in "flux" to NetCDF file_name, plus pressure from the
34  ! thermodynamics object
35  subroutine save_fluxes(file_name, config, thermodynamics, flux, &
36       &                 iverbose, is_hdf5_file, experiment_name, &
37       &                 is_double_precision)
38
39    use yomhook,                  only : lhook, dr_hook, jphook
40
41    use easy_netcdf
42
43    use radiation_io,             only : nulout
44    use radiation_config,         only : config_type, IGasModelMonochromatic
45    use radiation_thermodynamics, only : thermodynamics_type
46    use radiation_flux,           only : flux_type
47
48    character(len=*),           intent(in) :: file_name
49    type(config_type),          intent(in) :: config
50    type(thermodynamics_type),  intent(in) :: thermodynamics
51    type(flux_type),            intent(in) :: flux
52    integer,          optional, intent(in) :: iverbose
53    logical,          optional, intent(in) :: is_hdf5_file
54    logical,          optional, intent(in) :: is_double_precision
55    character(len=*), optional, intent(in) :: experiment_name
56
57    type(netcdf_file)                      :: out_file
58    integer                                :: ncol, n_lev_plus1
59    character(5), parameter                :: default_lw_units_str = 'W m-2'
60    character(5)                           :: lw_units_str
61    integer                                :: i_local_verbose
62
63    real(jphook) :: hook_handle
64
65    if (lhook) call dr_hook('radiation_save:save_fluxes',0,hook_handle)
66   
67    if (present(iverbose)) then
68      i_local_verbose = iverbose
69    else
70      i_local_verbose = config%iverbose
71    end if
72
73    ! Work out array dimensions
74    if (config%do_sw) then
75      ncol = size(flux%sw_up,1)
76      n_lev_plus1 = size(flux%sw_up,2)
77    elseif (config%do_lw) then
78      ncol = size(flux%lw_up,1)
79      n_lev_plus1 = size(flux%lw_up,2)
80    else
81      if (i_local_verbose >= 1) then
82        write(nulout,'(a,a,a)') 'Warning: neither longwave nor shortwave computed so ', &
83             &                  trim(file_name),' not written'
84      end if
85      return
86    end if
87
88    if (config%i_gas_model_lw == IGasModelMonochromatic &
89         .and. config%mono_lw_wavelength > 0.0_jprb) then
90      lw_units_str = 'W m-3'
91    else
92      lw_units_str = default_lw_units_str
93    end if
94
95    ! Open the file
96    call out_file%create(trim(file_name), iverbose=i_local_verbose, is_hdf5_file=is_hdf5_file)
97
98    ! Variables stored internally with column varying fastest, but in
99    ! output file column varies most slowly so need to transpose
100    call out_file%transpose_matrices(.true.)
101
102    ! Set default precision for file, if specified
103    if (present(is_double_precision)) then
104      call out_file%double_precision(is_double_precision)
105    end if
106
107    ! Spectral fluxes in memory are dimensioned (nband,ncol,nlev), but
108    ! are reoriented in the output file to be (nband,nlev,ncol), where
109    ! the convention here is first dimension varying fastest
110    call out_file%permute_3d_arrays( (/ 1, 3, 2 /) )
111
112    ! Define dimensions
113    call out_file%define_dimension("column", ncol)
114    call out_file%define_dimension("half_level", n_lev_plus1)
115
116    if (config%do_save_spectral_flux .or. config%do_toa_spectral_flux) then
117      if (config%do_lw) then
118        call out_file%define_dimension("band_lw", config%n_spec_lw)
119      end if
120      if (config%do_sw) then
121        call out_file%define_dimension("band_sw", config%n_spec_sw)
122      end if
123    else if (config%do_surface_sw_spectral_flux) then
124      if (config%do_sw) then
125        call out_file%define_dimension("band_sw", config%n_bands_sw)
126      end if
127    end if
128
129    if (config%do_lw .and. config%do_canopy_fluxes_lw) then
130      call out_file%define_dimension("canopy_band_lw", &
131           &  size(flux%lw_dn_surf_canopy, 1))
132    end if
133    if (config%do_sw .and. config%do_canopy_fluxes_sw) then
134      call out_file%define_dimension("canopy_band_sw", &
135           &  size(flux%sw_dn_diffuse_surf_canopy, 1))
136    end if
137
138    ! Put global attributes
139    call out_file%put_global_attributes( &
140         &   title_str="Radiative flux profiles from the ecRad offline radiation model", &
141         &   references_str="Hogan, R. J., and A. Bozzo, 2018: A flexible and efficient radiation " &
142         &   //"scheme for the ECMWF model. J. Adv. Modeling Earth Sys., 10, 1990–2008", &
143         &   source_str="ecRad offline radiation model")
144
145    ! Save "experiment" global attribute if present and not empty
146    if (present(experiment_name)) then
147      if (experiment_name /= " ") then
148        call out_file%put_global_attribute("experiment", experiment_name)
149      end if
150    end if
151
152    ! Define variables
153    call out_file%define_variable("pressure_hl", &
154         &   dim2_name="column", dim1_name="half_level", &
155         &   units_str="Pa", long_name="Pressure", &
156         &   standard_name="air_pressure")
157
158    if (config%do_lw) then
159      call out_file%define_variable("flux_up_lw", &
160           &   dim2_name="column", dim1_name="half_level", &
161           &   units_str=lw_units_str, long_name="Upwelling longwave flux", &
162           &   standard_name="upwelling_longwave_flux_in_air")
163      call out_file%define_variable("flux_dn_lw", &
164           &   dim2_name="column", dim1_name="half_level", &
165           &   units_str=lw_units_str, long_name="Downwelling longwave flux", &
166           &   standard_name="downwelling_longwave_flux_in_air")
167      if (config%do_clear) then
168        call out_file%define_variable("flux_up_lw_clear", &
169             &   dim2_name="column", dim1_name="half_level", &
170             &   units_str=lw_units_str, &
171             &   long_name="Upwelling clear-sky longwave flux")
172        call out_file%define_variable("flux_dn_lw_clear", &
173             &   dim2_name="column", dim1_name="half_level", &
174             &   units_str=lw_units_str, &
175             &   long_name="Downwelling clear-sky longwave flux")
176      end if
177
178      if (config%do_lw_derivatives) then
179        call out_file%define_variable("lw_derivative", &
180             &  dim2_name="column", dim1_name="half_level", &
181             &  units_str="1", &
182             &  long_name="Derivative of upwelling LW flux w.r.t. surface value")
183      end if
184
185      if (config%do_save_spectral_flux) then
186        call out_file%define_variable("spectral_flux_up_lw", &
187             &   dim3_name="column", dim2_name="half_level", &
188             &   dim1_name="band_lw", units_str=lw_units_str, &
189             &   long_name="Spectral upwelling longwave flux")
190        call out_file%define_variable("spectral_flux_dn_lw", &
191             &   dim3_name="column", dim2_name="half_level", &
192             &   dim1_name="band_lw", units_str=lw_units_str, &
193             &   long_name="Spectral downwelling longwave flux")
194        if (config%do_clear) then
195          call out_file%define_variable("spectral_flux_up_lw_clear", &
196               &   dim3_name="column", dim2_name="half_level", &
197               &   dim1_name="band_lw", units_str=lw_units_str, &
198               &   long_name="Spectral upwelling clear-sky longwave flux")
199          call out_file%define_variable("spectral_flux_dn_lw_clear", &
200               &   dim3_name="column", dim2_name="half_level", &
201               &   dim1_name="band_lw", units_str=lw_units_str, &
202               &   long_name="Spectral downwelling clear-sky longwave flux")
203        end if
204      end if
205   
206      if (config%do_toa_spectral_flux) then
207        call out_file%define_variable("spectral_flux_up_lw_toa", &
208             &   dim2_name="column", dim1_name="band_lw", units_str="W m-2", &
209             &   long_name="Spectral upwelling longwave flux at top-of-atmosphere")
210        if (config%do_clear) then
211          call out_file%define_variable("spectral_flux_up_lw_toa_clear", &
212               &   dim2_name="column", dim1_name="band_lw", units_str="W m-2", &
213               &   long_name="Spectral upwelling clear-sky longwave flux at top-of-atmosphere")
214        end if
215      end if
216   
217      if (config%do_canopy_fluxes_lw) then
218        call out_file%define_variable("canopy_flux_dn_lw_surf", &
219             &   dim2_name="column", dim1_name="canopy_band_lw", units_str=lw_units_str, &
220             &   long_name="Surface downwelling longwave flux in canopy bands")
221      end if
222
223    end if
224
225    if (config%do_sw) then
226      call out_file%define_variable("flux_up_sw", &
227           &   dim2_name="column", dim1_name="half_level", &
228           &   units_str="W m-2", long_name="Upwelling shortwave flux", &
229           &   standard_name="upwelling_shortwave_flux_in_air")
230      call out_file%define_variable("flux_dn_sw", &
231           &   dim2_name="column", dim1_name="half_level", &
232           &   units_str="W m-2", long_name="Downwelling shortwave flux", &
233           &   standard_name="downwelling_shortwave_flux_in_air")
234      if (config%do_sw_direct) then
235        call out_file%define_variable("flux_dn_direct_sw", &
236             &   dim2_name="column", dim1_name="half_level", &
237             &   units_str="W m-2", &
238             &   long_name="Downwelling direct shortwave flux")
239      end if
240      if (config%do_clear) then
241        call out_file%define_variable("flux_up_sw_clear", &
242             &   dim2_name="column", dim1_name="half_level", &
243             &   units_str="W m-2", &
244             &   long_name="Upwelling clear-sky shortwave flux")
245        call out_file%define_variable("flux_dn_sw_clear", &
246             &   dim2_name="column", dim1_name="half_level", &
247             &   units_str="W m-2", &
248             &   long_name="Downwelling clear-sky shortwave flux")
249        if (config%do_sw_direct) then
250          call out_file%define_variable("flux_dn_direct_sw_clear", &
251               &   dim2_name="column", dim1_name="half_level", &
252               &   units_str="W m-2", &
253               &   long_name="Downwelling clear-sky direct shortwave flux")
254        end if
255      end if
256
257      if (config%do_save_spectral_flux) then
258        call out_file%define_variable("spectral_flux_up_sw", &
259             &   dim3_name="column", dim2_name="half_level", &
260             &   dim1_name="band_sw", units_str="W m-2", &
261             &   long_name="Spectral upwelling shortwave flux")
262        call out_file%define_variable("spectral_flux_dn_sw", &
263             &   dim3_name="column", dim2_name="half_level", &
264             &   dim1_name="band_sw", units_str="W m-2", &
265             &   long_name="Spectral downwelling shortwave flux")
266        if (config%do_sw_direct) then
267          call out_file%define_variable("spectral_flux_dn_direct_sw", &
268               &   dim3_name="column", dim2_name="half_level", &
269               &   dim1_name="band_sw", units_str="W m-2", &
270               &   long_name="Spectral downwelling direct shortwave flux")
271        end if
272        if (config%do_clear) then
273          call out_file%define_variable("spectral_flux_up_sw_clear", &
274               &   dim3_name="column", dim2_name="half_level", &
275               &   dim1_name="band_sw", units_str="W m-2", &
276               &   long_name="Spectral upwelling clear-sky shortwave flux")
277          call out_file%define_variable("spectral_flux_dn_sw_clear", &
278               &   dim3_name="column", dim2_name="half_level", &
279               &   dim1_name="band_sw", units_str="W m-2", &
280               &   long_name="Spectral downwelling clear-sky shortwave flux")
281          if (config%do_sw_direct) then
282            call out_file%define_variable("spectral_flux_dn_direct_sw_clear", &
283                 &   dim3_name="column", dim2_name="half_level", &
284                 &   dim1_name="band_sw", units_str="W m-2", &
285                 &   long_name="Spectral downwelling clear-sky direct shortwave flux")
286          end if
287        end if
288      else if (config%do_surface_sw_spectral_flux) then
289        call out_file%define_variable("spectral_flux_dn_sw_surf", &
290             &   dim2_name="column", dim1_name="band_sw", units_str="W m-2", &
291             &   long_name="Spectral downwelling shortwave flux at surface")
292        call out_file%define_variable("spectral_flux_dn_direct_sw_surf", &
293             &   dim2_name="column", dim1_name="band_sw", units_str="W m-2", &
294             &   long_name="Spectral downwelling direct shortwave flux at surface")
295        if (config%do_clear) then
296          call out_file%define_variable("spectral_flux_dn_sw_surf_clear", &
297               &   dim2_name="column", dim1_name="band_sw", units_str="W m-2", &
298               &   long_name="Spectral downwelling clear-sky shortwave flux at surface")
299          call out_file%define_variable("spectral_flux_dn_direct_sw_surf_clear", &
300               &   dim2_name="column", dim1_name="band_sw", units_str="W m-2", &
301               &   long_name="Spectral downwelling clear-sky direct shortwave flux at surface")
302        end if
303      end if
304
305      if (config%do_toa_spectral_flux) then
306        call out_file%define_variable("spectral_flux_dn_sw_toa", &
307             &   dim2_name="column", dim1_name="band_sw", units_str="W m-2", &
308             &   long_name="Spectral downwelling shortwave flux at top-of-atmosphere")
309        call out_file%define_variable("spectral_flux_up_sw_toa", &
310             &   dim2_name="column", dim1_name="band_sw", units_str="W m-2", &
311             &   long_name="Spectral upwelling shortwave flux at top-of-atmosphere")
312        if (config%do_clear) then
313          call out_file%define_variable("spectral_flux_up_sw_toa_clear", &
314               &   dim2_name="column", dim1_name="band_sw", units_str="W m-2", &
315               &   long_name="Spectral upwelling clear-sky shortwave flux at top-of-atmosphere")
316        end if
317      end if
318   
319      if (config%do_canopy_fluxes_sw) then
320        call out_file%define_variable("canopy_flux_dn_diffuse_sw_surf", &
321             &   dim2_name="column", dim1_name="canopy_band_sw", units_str="W m-2", &
322             &   long_name="Surface downwelling diffuse shortwave flux in canopy bands")
323        call out_file%define_variable("canopy_flux_dn_direct_sw_surf", &
324             &   dim2_name="column", dim1_name="canopy_band_sw", units_str="W m-2", &
325             &   long_name="Surface downwelling direct shortwave flux in canopy bands")
326      end if
327
328    end if
329   
330    if (config%do_lw .and. config%do_clouds) then
331      call out_file%define_variable("cloud_cover_lw", &
332           &  dim1_name="column", units_str="1", &
333           &  long_name="Total cloud cover diagnosed by longwave solver", &
334           &  standard_name="cloud_area_fraction")
335    end if
336    if (config%do_sw .and. config%do_clouds) then
337      call out_file%define_variable("cloud_cover_sw", &
338           &  dim1_name="column", units_str="1", &
339           &  long_name="Total cloud cover diagnosed by shortwave solver", &
340           &  standard_name="cloud_area_fraction")
341    end if
342
343    ! Write variables
344
345    call out_file%put("pressure_hl", thermodynamics%pressure_hl)
346
347    if (config%do_lw) then
348      call out_file%put("flux_up_lw", flux%lw_up)
349      call out_file%put("flux_dn_lw", flux%lw_dn)
350      if (config%do_clear) then
351        call out_file%put("flux_up_lw_clear", flux%lw_up_clear)
352        call out_file%put("flux_dn_lw_clear", flux%lw_dn_clear)
353      end if
354
355      if (config%do_lw_derivatives) then
356        call out_file%put("lw_derivative", flux%lw_derivatives)
357      end if
358
359      if (config%do_save_spectral_flux) then
360        call out_file%put("spectral_flux_up_lw", flux%lw_up_band)
361        call out_file%put("spectral_flux_dn_lw", flux%lw_dn_band)
362        if (config%do_clear) then
363          call out_file%put("spectral_flux_up_lw_clear", flux%lw_up_clear_band)
364          call out_file%put("spectral_flux_dn_lw_clear", flux%lw_dn_clear_band)
365        end if
366      end if
367
368      if (config%do_toa_spectral_flux) then
369        call out_file%put("spectral_flux_up_lw_toa", flux%lw_up_toa_band, &
370               &   do_transp=.false.)
371        if (config%do_clear) then
372          call out_file%put("spectral_flux_up_lw_toa_clear", flux%lw_up_toa_clear_band, &
373               &   do_transp=.false.)
374        end if
375      end if
376     
377      if (config%do_canopy_fluxes_lw) then
378        call out_file%put("canopy_flux_dn_lw_surf", flux%lw_dn_surf_canopy, &
379             &            do_transp = .false.)
380      end if
381
382    end if
383
384    if (config%do_sw) then
385      call out_file%put("flux_up_sw", flux%sw_up)
386      call out_file%put("flux_dn_sw", flux%sw_dn)
387      if (config%do_sw_direct) then
388        call out_file%put("flux_dn_direct_sw", flux%sw_dn_direct)
389      end if
390      if (config%do_clear) then
391        call out_file%put("flux_up_sw_clear", flux%sw_up_clear)
392        call out_file%put("flux_dn_sw_clear", flux%sw_dn_clear)
393        if (config%do_sw_direct) then
394          call out_file%put("flux_dn_direct_sw_clear", flux%sw_dn_direct_clear)
395        end if
396      end if
397
398      if (config%do_save_spectral_flux) then
399        call out_file%put("spectral_flux_up_sw", flux%sw_up_band)
400        call out_file%put("spectral_flux_dn_sw", flux%sw_dn_band)
401        if (config%do_sw_direct) then
402          call out_file%put("spectral_flux_dn_direct_sw", &
403               &   flux%sw_dn_direct_band)
404        end if
405        if (config%do_clear) then
406          call out_file%put("spectral_flux_up_sw_clear", flux%sw_up_clear_band)
407          call out_file%put("spectral_flux_dn_sw_clear", flux%sw_dn_clear_band)
408          if (config%do_sw_direct) then
409            call out_file%put("spectral_flux_dn_direct_sw_clear", &
410                 &   flux%sw_dn_direct_clear_band)
411          end if
412        end if
413      else if (config%do_surface_sw_spectral_flux) then
414        call out_file%put("spectral_flux_dn_sw_surf", flux%sw_dn_surf_band, &
415               &   do_transp=.false.)
416        call out_file%put("spectral_flux_dn_direct_sw_surf", flux%sw_dn_direct_surf_band, &
417               &   do_transp=.false.)
418        if (config%do_clear) then
419          call out_file%put("spectral_flux_dn_sw_surf_clear", flux%sw_dn_surf_clear_band, &
420               &   do_transp=.false.)
421          call out_file%put("spectral_flux_dn_direct_sw_surf_clear", &
422               &            flux%sw_dn_direct_surf_clear_band, do_transp=.false.)
423        end if
424      end if
425
426      if (config%do_toa_spectral_flux) then
427        call out_file%put("spectral_flux_dn_sw_toa", flux%sw_dn_toa_band, &
428               &   do_transp=.false.)
429        call out_file%put("spectral_flux_up_sw_toa", flux%sw_up_toa_band, &
430               &   do_transp=.false.)
431        if (config%do_clear) then
432          call out_file%put("spectral_flux_up_sw_toa_clear", flux%sw_up_toa_clear_band, &
433               &   do_transp=.false.)
434        end if
435      end if
436     
437      if (config%do_canopy_fluxes_sw) then
438        call out_file%put("canopy_flux_dn_diffuse_sw_surf", flux%sw_dn_diffuse_surf_canopy, &
439             &            do_transp = .false.)
440        call out_file%put("canopy_flux_dn_direct_sw_surf",  flux%sw_dn_direct_surf_canopy, &
441             &            do_transp = .false.)
442      end if
443
444    end if
445
446    if (config%do_lw .and. config%do_clouds) then
447      call out_file%put("cloud_cover_lw", flux%cloud_cover_lw)
448    end if
449    if (config%do_sw .and. config%do_clouds) then
450      call out_file%put("cloud_cover_sw", flux%cloud_cover_sw)
451    end if
452
453    ! Close file
454    call out_file%close()
455
456    if (lhook) call dr_hook('radiation_save:save_fluxes',1,hook_handle)
457
458  end subroutine save_fluxes
459 
460
461  !---------------------------------------------------------------------
462  ! Save IFS-style net fluxes in "flux" to NetCDF file_name, plus
463  ! pressure from the thermodynamics object
464  subroutine save_net_fluxes(file_name, config, thermodynamics, flux, &
465       &                     iverbose, is_hdf5_file, experiment_name, &
466       &                     is_double_precision)
467
468    use yomhook,                  only : lhook, dr_hook, jphook
469
470    use easy_netcdf
471
472    use radiation_io,             only : nulout
473    use radiation_config,         only : config_type, IGasModelMonochromatic
474    use radiation_thermodynamics, only : thermodynamics_type
475    use radiation_flux,           only : flux_type
476
477    character(len=*),           intent(in) :: file_name
478    type(config_type),          intent(in) :: config
479    type(thermodynamics_type),  intent(in) :: thermodynamics
480    type(flux_type),            intent(in) :: flux
481    integer,          optional, intent(in) :: iverbose
482    logical,          optional, intent(in) :: is_hdf5_file
483    logical,          optional, intent(in) :: is_double_precision
484    character(len=*), optional, intent(in) :: experiment_name
485
486    type(netcdf_file)                      :: out_file
487    integer                                :: ncol, n_lev_plus1
488    character(5), parameter                :: default_lw_units_str = 'W m-2'
489    character(5)                           :: lw_units_str
490    integer                                :: i_local_verbose
491
492    real(jphook) :: hook_handle
493
494    if (lhook) call dr_hook('radiation_save:save_net_fluxes',0,hook_handle)
495   
496    if (present(iverbose)) then
497      i_local_verbose = iverbose
498    else
499      i_local_verbose = config%iverbose
500    end if
501
502    ! Work out array dimensions
503    if (config%do_sw) then
504      ncol = size(flux%sw_up,1)
505      n_lev_plus1 = size(flux%sw_up,2)
506    elseif (config%do_lw) then
507      ncol = size(flux%lw_up,1)
508      n_lev_plus1 = size(flux%lw_up,2)
509    else
510      if (i_local_verbose >= 1) then
511        write(nulout,'(a,a,a)') 'Warning: neither longwave nor shortwave computed so ', &
512             &                  file_name,' not written'
513      end if
514      return
515    end if
516
517    if (config%i_gas_model_lw == IGasModelMonochromatic &
518         .and. config%mono_lw_wavelength > 0.0_jprb) then
519      lw_units_str = 'W m-3'
520    else
521      lw_units_str = default_lw_units_str
522    end if
523
524    ! Open the file
525    call out_file%create(trim(file_name), iverbose=i_local_verbose, is_hdf5_file=is_hdf5_file)
526
527    ! Variables stored internally with column varying fastest, but in
528    ! output file column varies most slowly so need to transpose
529    call out_file%transpose_matrices(.true.)
530
531    ! Set default precision for file, if specified
532    if (present(is_double_precision)) then
533      call out_file%double_precision(is_double_precision)
534    end if
535
536    ! Spectral fluxes in memory are dimensioned (nband,ncol,nlev), but
537    ! are reoriented in the output file to be (nband,nlev,ncol), where
538    ! the convention here is first dimension varying fastest
539    call out_file%permute_3d_arrays( (/ 1, 3, 2 /) )
540
541    ! Define dimensions
542    call out_file%define_dimension("column", ncol)
543    call out_file%define_dimension("half_level", n_lev_plus1)
544
545    if (config%do_lw .and. config%do_canopy_fluxes_lw) then
546      call out_file%define_dimension("canopy_band_lw", &
547           &  size(flux%lw_dn_surf_canopy, 1))
548    end if
549    if (config%do_sw .and. config%do_canopy_fluxes_sw) then
550      call out_file%define_dimension("canopy_band_sw", &
551           &  size(flux%sw_dn_diffuse_surf_canopy, 1))
552    end if
553
554    ! Put global attributes
555    call out_file%put_global_attributes( &
556         &   title_str="Radiative flux profiles from the ecRad offline radiation model", &
557         &   references_str="Hogan, R. J., and A. Bozzo, 2018: A flexible and efficient radiation " &
558         &   //"scheme for the ECMWF model. J. Adv. Modeling Earth Sys., 10, 1990–2008", &
559         &   source_str="ecRad offline radiation model")
560
561    ! Save "experiment" global attribute if present and not empty
562    if (present(experiment_name)) then
563      if (experiment_name /= " ") then
564        call out_file%put_global_attribute("experiment", experiment_name)
565      end if
566    end if
567
568    ! Define variables
569    call out_file%define_variable("pressure_hl", &
570         &   dim2_name="column", dim1_name="half_level", &
571         &   units_str="Pa", long_name="Pressure", &
572         &   standard_name="air_pressure")
573
574    if (config%do_lw) then
575      call out_file%define_variable("flux_net_lw", &
576           &   dim2_name="column", dim1_name="half_level", &
577           &   units_str=lw_units_str, long_name="Net downward longwave flux", &
578           &   standard_name="net_downward_longwave_flux_in_air")
579      call out_file%define_variable("flux_dn_lw_surf", &
580           &   dim1_name="column", &
581           &   units_str=lw_units_str, long_name="Surface downwelling longwave flux", &
582           &   standard_name="surface_downwelling_longwave_flux_in_air")
583      if (config%do_clear) then
584        call out_file%define_variable("flux_net_lw_clear", &
585             &   dim2_name="column", dim1_name="half_level", &
586             &   units_str=lw_units_str, &
587             &   long_name="Net downward clear-sky longwave flux", &
588             &   standard_name="net_downward_longwave_flux_in_air_assuming_clear_sky")
589        call out_file%define_variable("flux_dn_lw_clear_surf", &
590             &   dim1_name="column", &
591             &   units_str=lw_units_str, &
592             &   long_name="Surface downwelling clear-sky longwave flux", &
593             &   standard_name="surface_downwelling_longwave_flux_in_air_assuming_clear_sky")
594      end if
595
596      if (config%do_lw_derivatives) then
597        call out_file%define_variable("lw_derivative", &
598             &  dim2_name="column", dim1_name="half_level", &
599             &  units_str="1", &
600             &  long_name="Derivative of upwelling LW flux w.r.t. surface value")
601      end if
602   
603      if (config%do_canopy_fluxes_lw) then
604        call out_file%define_variable("canopy_flux_dn_lw_surf", &
605             &   dim2_name="column", dim1_name="canopy_band_lw", units_str=lw_units_str, &
606             &   long_name="Surface downwelling longwave flux in canopy bands")
607      end if
608
609    end if
610
611    if (config%do_sw) then
612      call out_file%define_variable("flux_net_sw", &
613           &   dim2_name="column", dim1_name="half_level", &
614           &   units_str="W m-2", long_name="Net downward shortwave flux", &
615           &   standard_name="net_downward_shortwave_flux_in_air")
616      call out_file%define_variable("flux_dn_sw_surf", &
617           &   dim1_name="column", &
618           &   units_str="W m-2", long_name="Surface downwelling shortwave flux", &
619           &   standard_name="surface_downwelling_shortwave_flux_in_air")
620      call out_file%define_variable("flux_dn_sw_toa", &
621           &   dim1_name="column", &
622           &   units_str="W m-2", long_name="Top-of-atmosphere downwelling shortwave flux", &
623           &   standard_name="toa_incoming_shortwave_flux")
624      if (config%do_sw_direct) then
625        call out_file%define_variable("flux_dn_direct_sw_surf", &
626             &   dim1_name="column", &
627             &   units_str="W m-2", &
628             &   long_name="Surface downwelling direct shortwave flux")
629      end if
630      if (config%do_clear) then
631        call out_file%define_variable("flux_net_sw_clear", &
632             &   dim2_name="column", dim1_name="half_level", &
633             &   units_str="W m-2", &
634             &   long_name="Net downward clear-sky shortwave flux")
635        call out_file%define_variable("flux_dn_sw_clear_surf", &
636             &   dim1_name="column", &
637             &   units_str="W m-2", &
638             &   long_name="Surface downwelling clear-sky shortwave flux")
639        if (config%do_sw_direct) then
640          call out_file%define_variable("flux_dn_direct_sw_clear_surf", &
641               &   dim1_name="column", &
642               &   units_str="W m-2", &
643               &   long_name="Surface downwelling clear-sky direct shortwave flux")
644        end if
645      end if
646   
647      if (config%do_canopy_fluxes_sw) then
648        call out_file%define_variable("canopy_flux_dn_diffuse_sw_surf", &
649             &   dim2_name="column", dim1_name="canopy_band_sw", units_str="W m-2", &
650             &   long_name="Surface downwelling diffuse shortwave flux in canopy bands")
651        call out_file%define_variable("canopy_flux_dn_direct_sw_surf", &
652             &   dim2_name="column", dim1_name="canopy_band_sw", units_str="W m-2", &
653             &   long_name="Surface downwelling direct shortwave flux in canopy bands")
654      end if
655
656    end if
657   
658    ! Write variables
659
660    call out_file%put("pressure_hl", thermodynamics%pressure_hl)
661
662    if (config%do_lw) then
663      call out_file%put("flux_net_lw", flux%lw_dn-flux%lw_up)
664      call out_file%put("flux_dn_lw_surf", flux%lw_dn(:,n_lev_plus1))
665      if (config%do_clear) then
666        call out_file%put("flux_net_lw_clear", flux%lw_dn_clear-flux%lw_up_clear)
667        call out_file%put("flux_dn_lw_clear_surf", flux%lw_dn_clear(:,n_lev_plus1))
668      end if
669
670      if (config%do_lw_derivatives) then
671        call out_file%put("lw_derivative", flux%lw_derivatives)
672      end if
673
674      if (config%do_canopy_fluxes_lw) then
675        call out_file%put("canopy_flux_dn_lw_surf", flux%lw_dn_surf_canopy, &
676             &            do_transp = .false.)
677      end if
678
679    end if
680
681    if (config%do_sw) then
682      call out_file%put("flux_net_sw", flux%sw_dn-flux%sw_up)
683      call out_file%put("flux_dn_sw_surf", flux%sw_dn(:,n_lev_plus1))
684      call out_file%put("flux_dn_sw_toa", flux%sw_dn(:,1))
685      if (config%do_sw_direct) then
686        call out_file%put("flux_dn_direct_sw_surf", flux%sw_dn_direct(:,n_lev_plus1))
687      end if
688      if (config%do_clear) then
689        call out_file%put("flux_net_sw_clear", flux%sw_dn_clear-flux%sw_up_clear)
690        call out_file%put("flux_dn_sw_clear_surf", flux%sw_dn_clear(:,n_lev_plus1))
691        if (config%do_sw_direct) then
692          call out_file%put("flux_dn_direct_sw_clear_surf", flux%sw_dn_direct_clear(:,n_lev_plus1))
693        end if
694      end if
695
696      if (config%do_canopy_fluxes_sw) then
697        call out_file%put("canopy_flux_dn_diffuse_sw_surf", flux%sw_dn_diffuse_surf_canopy, &
698             &            do_transp = .false.)
699        call out_file%put("canopy_flux_dn_direct_sw_surf",  flux%sw_dn_direct_surf_canopy, &
700             &            do_transp = .false.)
701      end if
702
703    end if
704
705    ! Close file
706    call out_file%close()
707
708    if (lhook) call dr_hook('radiation_save:save_net_fluxes',1,hook_handle)
709
710  end subroutine save_net_fluxes
711 
712
713  !---------------------------------------------------------------------
714  ! Save intermediate radiative properties, specifically the
715  ! scattering and absorption properties at each g-point/band
716  subroutine save_radiative_properties(file_name, nlev, &
717       &  istartcol, iendcol, &
718       &  config, single_level, thermodynamics, cloud, &
719       &  planck_hl, lw_emission, lw_albedo, &
720       &  sw_albedo_direct, sw_albedo_diffuse, &
721       &  incoming_sw, &
722       &  od_lw, ssa_lw, g_lw, &
723       &  od_sw, ssa_sw, g_sw, &
724       &  od_lw_cloud, ssa_lw_cloud, g_lw_cloud, &
725       &  od_sw_cloud, ssa_sw_cloud, g_sw_cloud)
726
727    use radiation_config,        only : config_type
728    use radiation_single_level,  only : single_level_type
729    use radiation_thermodynamics,only : thermodynamics_type
730    use radiation_cloud,         only : cloud_type
731    use easy_netcdf
732
733    character(len=*),         intent(in) :: file_name
734    type(config_type),        intent(in) :: config
735    type(single_level_type),  intent(in) :: single_level
736    type(thermodynamics_type),intent(in) :: thermodynamics
737    type(cloud_type),         intent(in) :: cloud
738
739    integer, intent(in) :: nlev, istartcol, iendcol
740
741    ! Input variables, as defined in radiation_interface.F90
742
743    ! Layer optical depth, single scattering albedo and asymmetry factor of
744    ! gases and aerosols at each shortwave g-point
745    real(jprb), intent(in), dimension(config%n_g_sw,nlev,istartcol:iendcol) :: od_sw, ssa_sw, g_sw
746
747   ! Layer optical depth, single scattering albedo and asymmetry factor of
748    ! hydrometeors in each shortwave band
749    real(jprb), intent(in), dimension(config%n_bands_sw,nlev,istartcol:iendcol)   :: &
750         &  od_sw_cloud, ssa_sw_cloud, g_sw_cloud
751
752    ! Direct and diffuse surface albedo, and the incoming shortwave
753    ! flux into a plane perpendicular to the incoming radiation at
754    ! top-of-atmosphere in each of the shortwave g-points
755    real(jprb), intent(in), dimension(config%n_g_sw,istartcol:iendcol) &
756         &  :: sw_albedo_direct, sw_albedo_diffuse, incoming_sw
757
758    ! Layer optical depth, single scattering albedo and asymmetry factor of
759    ! gases and aerosols at each longwave g-point, where the latter
760    ! two variables are only defined if aerosol longwave scattering is
761    ! enabled (otherwise both are treated as zero).
762    real(jprb), intent(in), dimension(config%n_g_lw,nlev,istartcol:iendcol) :: od_lw
763    real(jprb), intent(in), dimension(config%n_g_lw_if_scattering,nlev,istartcol:iendcol) :: &
764         &  ssa_lw, g_lw
765
766    ! Layer optical depth, single scattering albedo and asymmetry factor of
767    ! hydrometeors in each longwave band, where the latter two
768    ! variables are only defined if hydrometeor longwave scattering is
769    ! enabled (otherwise both are treated as zero).
770    real(jprb), intent(in), dimension(config%n_bands_lw,nlev,istartcol:iendcol) :: od_lw_cloud
771    real(jprb), intent(in), dimension(config%n_bands_lw_if_scattering,nlev,istartcol:iendcol) :: &
772         &  ssa_lw_cloud, g_lw_cloud
773
774    ! The Planck function (emitted flux from a black body) at half
775    ! levels and at the surface at each longwave g-point
776    real(jprb), intent(in), dimension(config%n_g_lw,nlev+1,istartcol:iendcol) :: planck_hl
777
778    ! Emission (Planck*emissivity) and albedo (1-emissivity) at the
779    ! surface at each longwave g-point
780    real(jprb), intent(in), dimension(config%n_g_lw, istartcol:iendcol) :: lw_emission, lw_albedo
781
782    ! Local variables
783
784    integer :: n_col_local ! Number of columns from istartcol to iendcol
785
786    ! Object for output NetCDF file
787    type(netcdf_file) :: out_file
788
789    n_col_local = iendcol + 1 - istartcol
790
791    ! Alas the NetCDF library is not thread-safe for writing, so we
792    ! must write radiative-property files serially
793
794    !$OMP CRITICAL
795
796    ! Open the file
797    call out_file%create(trim(file_name), iverbose=config%iverbose)
798
799    ! Configure matrix and 3D-array orientation
800    call out_file%transpose_matrices(.true.)
801
802    ! Sometimes the Planck function values are very large or small
803    ! even if the fluxes are within a manageable range
804    call out_file%double_precision(.true.)
805
806    ! Define dimensions
807    !    call out_file%define_dimension("column", n_col_local)
808    call out_file%define_dimension("column", 0) ! "Unlimited" dimension
809    call out_file%define_dimension("level", nlev)
810    call out_file%define_dimension("half_level", nlev+1)
811    if (config%do_clouds) then
812      call out_file%define_dimension("level_interface", nlev-1)
813    end if
814
815    if (config%do_lw) then
816      call out_file%define_dimension("gpoint_lw", config%n_g_lw)
817      if (config%do_clouds) then
818        call out_file%define_dimension("band_lw", config%n_bands_lw)
819      end if
820    end if
821    if (config%do_sw) then
822      call out_file%define_dimension("gpoint_sw", config%n_g_sw)
823      if (config%do_clouds) then
824        call out_file%define_dimension("band_sw", config%n_bands_sw)
825      end if
826    end if
827
828    ! Put global attributes
829    call out_file%put_global_attributes( &
830         &   title_str="Spectral radiative properties from the ecRad offline radiation model", &
831         &   references_str="Hogan, R. J., and A. Bozzo, 2018: A flexible and efficient radiation " &
832         &   //"scheme for the ECMWF model. J. Adv. Modeling Earth Sys., 10, 1990–2008", &
833         &   source_str="ecRad offline radiation model")
834
835    ! Define variables
836    call out_file%define_variable("pressure_hl", &
837         &  dim2_name="column", dim1_name="half_level", &
838         &  units_str="Pa", long_name="Pressure on half-levels")
839
840    if (allocated(thermodynamics%h2o_sat_liq) .and. config%use_aerosols) then
841      call out_file%define_variable("q_sat_liquid", &
842           &  dim2_name="column", dim1_name="level", &
843           &  units_str="kg kg-1", long_name="Specific humidity at liquid saturation")
844    end if
845
846    if (config%do_sw) then
847      call out_file%define_variable("cos_solar_zenith_angle", &
848           &  dim1_name="column", units_str="1", &
849           &  long_name="Cosine of the solar zenith angle")
850    end if
851
852    if (config%do_clouds) then
853      call out_file%define_variable("cloud_fraction", &
854           &  dim2_name="column", dim1_name="level", &
855           &  units_str="1", long_name="Cloud fraction")
856      call out_file%define_variable("overlap_param", &
857           &  dim2_name="column", dim1_name="level_interface", &
858           &  units_str="1", long_name="Cloud overlap parameter")
859    end if
860
861    if (config%do_lw) then
862      call out_file%define_variable("planck_hl", &
863           &  dim3_name="column", dim2_name="half_level", dim1_name="gpoint_lw", &
864           &  units_str="W m-2", long_name="Planck function on half-levels")
865      call out_file%define_variable("lw_emission", &
866           &  dim2_name="column", dim1_name="gpoint_lw", &
867           &  units_str="W m-2", long_name="Longwave surface emission")
868      call out_file%define_variable("lw_emissivity", &
869           &  dim2_name="column", dim1_name="gpoint_lw", &
870           &  units_str="1", long_name="Surface longwave emissivity")
871
872      call out_file%define_variable("od_lw", &
873           &  dim3_name="column", dim2_name="level", dim1_name="gpoint_lw", &
874           &  units_str="1", long_name="Clear-sky longwave optical depth")
875      if (config%do_lw_aerosol_scattering) then
876        call out_file%define_variable("ssa_lw", &
877           &  dim3_name="column", dim2_name="level", dim1_name="gpoint_lw", &
878           &  units_str="1", long_name="Clear-sky longwave single scattering albedo")
879        call out_file%define_variable("asymmetry_lw", &
880           &  dim3_name="column", dim2_name="level", dim1_name="gpoint_lw", &
881           &  units_str="1", long_name="Clear-sky longwave asymmetry factor")
882      end if
883
884      if (config%do_clouds) then
885        call out_file%define_variable("od_lw_cloud", &
886             &  dim3_name="column", dim2_name="level", dim1_name="band_lw", &
887             &  units_str="1", long_name="In-cloud longwave optical depth")
888        if (config%do_lw_cloud_scattering) then
889          call out_file%define_variable("ssa_lw_cloud", &
890               &  dim3_name="column", dim2_name="level", dim1_name="band_lw", &
891               &  units_str="1", long_name="Cloud longwave single scattering albedo")
892          call out_file%define_variable("asymmetry_lw_cloud", &
893               &  dim3_name="column", dim2_name="level", dim1_name="band_lw", &
894               &  units_str="1", long_name="Cloud longwave asymmetry factor")
895        end if
896      end if ! do_clouds
897    end if ! do_lw
898   
899    if (config%do_sw) then
900      call out_file%define_variable("incoming_sw", &
901           &  dim2_name="column", dim1_name="gpoint_sw", &
902           &  units_str="W m-2", long_name="Incoming shortwave flux at top-of-atmosphere in direction of sun")
903
904      call out_file%define_variable("sw_albedo", &
905           &  dim2_name="column", dim1_name="gpoint_sw", &
906           &  units_str="1", long_name="Surface shortwave albedo to diffuse radiation")
907      call out_file%define_variable("sw_albedo_direct", &
908           &  dim2_name="column", dim1_name="gpoint_sw", &
909           &  units_str="1", long_name="Surface shortwave albedo to direct radiation")
910
911      call out_file%define_variable("od_sw", &
912           &  dim3_name="column", dim2_name="level", dim1_name="gpoint_sw", &
913           &  units_str="1", long_name="Clear-sky shortwave optical depth")
914      call out_file%define_variable("ssa_sw", &
915           &  dim3_name="column", dim2_name="level", dim1_name="gpoint_sw", &
916           &  units_str="1", long_name="Clear-sky shortwave single scattering albedo")
917      call out_file%define_variable("asymmetry_sw", &
918           &  dim3_name="column", dim2_name="level", dim1_name="gpoint_sw", &
919           &  units_str="1", long_name="Clear-sky shortwave asymmetry factor")
920
921      if (config%do_clouds) then
922        call out_file%define_variable("od_sw_cloud", &
923             &  dim3_name="column", dim2_name="level", dim1_name="band_sw", &
924             &  units_str="1", long_name="In-cloud shortwave optical depth")
925        call out_file%define_variable("ssa_sw_cloud", &
926             &  dim3_name="column", dim2_name="level", dim1_name="band_sw", &
927             &  units_str="1", long_name="Cloud shortwave single scattering albedo")
928        call out_file%define_variable("asymmetry_sw_cloud", &
929             &  dim3_name="column", dim2_name="level", dim1_name="band_sw", &
930             &  units_str="1", long_name="Cloud shortwave asymmetry factor")
931      end if
932    end if
933   
934    if (config%do_clouds) then
935      if (allocated(cloud%fractional_std)) then
936        call out_file%define_variable("fractional_std", &
937             &  dim2_name="column", dim1_name="level", units_str="1", &
938             &  long_name="Fractional standard deviation of cloud optical depth")
939      end if
940      if (allocated(cloud%inv_cloud_effective_size)) then
941        call out_file%define_variable("inv_cloud_effective_size", &
942             &  dim2_name="column", dim1_name="level", units_str="m-1", &
943             &  long_name="Inverse of cloud effective horizontal size")
944      end if
945      if (allocated(cloud%inv_inhom_effective_size)) then
946        call out_file%define_variable("inv_inhom_effective_size", &
947             &  dim2_name="column", dim1_name="level", units_str="m-1", &
948             &  long_name="Inverse of cloud inhomogeneity effective horizontal size")
949      end if
950   end if
951
952    ! Write variables
953    call out_file%put("pressure_hl", thermodynamics%pressure_hl(istartcol:iendcol,:))
954
955    if (allocated(thermodynamics%h2o_sat_liq) .and. config%use_aerosols) then
956      call out_file%put("q_sat_liquid", thermodynamics%h2o_sat_liq(istartcol:iendcol,:))
957    end if
958
959    if (config%do_clouds) then
960      call out_file%put("cloud_fraction", cloud%fraction(istartcol:iendcol,:))
961      call out_file%put("overlap_param", cloud%overlap_param(istartcol:iendcol,:))
962    end if
963
964    if (config%do_sw) then
965      call out_file%put("cos_solar_zenith_angle", single_level%cos_sza(istartcol:iendcol))
966      call out_file%put("sw_albedo", sw_albedo_diffuse, do_transp=.false.)
967      call out_file%put("sw_albedo_direct", sw_albedo_direct, do_transp=.false.)
968    end if
969
970    if (config%do_lw) then
971      call out_file%put("lw_emissivity", 1.0_jprb - lw_albedo, do_transp=.false.)
972      call out_file%put("planck_hl", planck_hl)
973      call out_file%put("lw_emission", lw_emission, do_transp=.false.)
974     
975      call out_file%put("od_lw", od_lw)
976      if (config%do_lw_aerosol_scattering) then
977        call out_file%put("ssa_lw", ssa_lw)
978        call out_file%put("asymmetry_lw", g_lw)
979      end if
980     
981      if (config%do_clouds) then
982        call out_file%put("od_lw_cloud", od_lw_cloud)
983        if (config%do_lw_cloud_scattering) then
984          call out_file%put("ssa_lw_cloud", ssa_lw_cloud)
985          call out_file%put("asymmetry_lw_cloud", g_lw_cloud)
986        end if
987      end if
988    end if
989   
990    if (config%do_sw) then
991      call out_file%put("incoming_sw", incoming_sw, do_transp=.false.)
992     
993      call out_file%put("od_sw", od_sw)
994      call out_file%put("ssa_sw", ssa_sw)
995      call out_file%put("asymmetry_sw", g_sw)
996     
997      if (config%do_clouds) then
998        call out_file%put("od_sw_cloud", od_sw_cloud)
999        call out_file%put("ssa_sw_cloud", ssa_sw_cloud)
1000        call out_file%put("asymmetry_sw_cloud", g_sw_cloud)
1001      end if
1002    end if
1003   
1004    if (config%do_clouds) then
1005      if (allocated(cloud%fractional_std)) then
1006        call out_file%put("fractional_std", cloud%fractional_std(istartcol:iendcol,:))
1007      end if
1008      if (allocated(cloud%inv_cloud_effective_size)) then
1009        call out_file%put("inv_cloud_effective_size", cloud%inv_cloud_effective_size(istartcol:iendcol,:))
1010      end if
1011      if (allocated(cloud%inv_inhom_effective_size)) then
1012        call out_file%put("inv_inhom_effective_size", cloud%inv_inhom_effective_size(istartcol:iendcol,:))
1013      end if
1014    end if
1015
1016    ! Close the file
1017    call out_file%close()
1018
1019    !$OMP END CRITICAL
1020   
1021  end subroutine save_radiative_properties
1022 
1023
1024  !---------------------------------------------------------------------
1025  ! Save inputs to the radiation scheme
1026  subroutine save_inputs(file_name, config, single_level, thermodynamics, &
1027       &                 gas, cloud, aerosol, lat, lon, iverbose)
1028    use yomhook,                  only : lhook, dr_hook, jphook
1029
1030    use radiation_config,         only : config_type
1031    use radiation_single_level,   only : single_level_type
1032    use radiation_thermodynamics, only : thermodynamics_type
1033    use radiation_gas
1034    use radiation_cloud,          only : cloud_type
1035    use radiation_aerosol,        only : aerosol_type
1036    use easy_netcdf
1037
1038    character(len=*),             intent(in)   :: file_name
1039    type(config_type),            intent(in)   :: config
1040    type(single_level_type),      intent(in)   :: single_level
1041    type(thermodynamics_type),    intent(in)   :: thermodynamics
1042    type(gas_type),               intent(inout):: gas
1043    type(cloud_type),             intent(in)   :: cloud
1044    type(aerosol_type), optional, intent(in)   :: aerosol
1045    real(jprb),         optional, intent(in)   :: lat(:), lon(:)
1046    integer,            optional, intent(in)   :: iverbose
1047
1048    real(jprb), allocatable :: mixing_ratio(:,:)
1049    real(jprb), allocatable :: aerosol_mmr(:,:,:)
1050    real(jprb), allocatable :: seed(:)
1051    integer       :: i_local_verbose
1052    integer       :: ncol, nlev
1053    integer       :: jgas
1054    character(32) :: var_name, long_name
1055
1056    ! Object for output NetCDF file
1057    type(netcdf_file) :: out_file
1058
1059    logical :: do_aerosol
1060
1061    real(jphook) :: hook_handle
1062
1063    if (lhook) call dr_hook('radiation_save:save_inputs',0,hook_handle)
1064
1065    if (present(iverbose)) then
1066      i_local_verbose = iverbose
1067    else
1068      i_local_verbose = config%iverbose
1069    end if
1070
1071    ! Work out array dimensions
1072    ncol = size(thermodynamics%pressure_hl,1)
1073    nlev = size(thermodynamics%pressure_hl,2)
1074    nlev = nlev - 1
1075   
1076    do_aerosol = config%use_aerosols .and. present(aerosol)
1077
1078    ! Open the file
1079    call out_file%create(trim(file_name), iverbose=i_local_verbose)
1080
1081    ! Variables stored internally with column varying fastest, but in
1082    ! output file column varies most slowly so need to transpose
1083    call out_file%transpose_matrices(.true.)
1084
1085    ! In the case of aerosols we convert dimensions (ncol,nlev,ntype)
1086    ! in memory to (nlev,ntype,ncol) in file (in both cases the first
1087    ! dimension varying fastest).
1088    call out_file%permute_3d_arrays( (/ 2, 3, 1 /) ) ! For aerosols
1089
1090    ! Define dimensions
1091    call out_file%define_dimension("column",     ncol)
1092    call out_file%define_dimension("level",      nlev)
1093    call out_file%define_dimension("half_level", nlev+1)
1094    if (allocated(cloud%overlap_param)) then
1095      call out_file%define_dimension("level_interface", nlev-1)
1096    end if
1097    call out_file%define_dimension("sw_albedo_band", &
1098         &                         size(single_level%sw_albedo,2))
1099    call out_file%define_dimension("lw_emissivity_band", &
1100         &                         size(single_level%lw_emissivity,2))
1101
1102    if (do_aerosol) then
1103      call out_file%define_dimension("aerosol_type", size(aerosol%mixing_ratio,3))
1104    end if
1105
1106    ! Put global attributes
1107    call out_file%put_global_attributes( &
1108         &   title_str="Input profiles to the ecRad offline radiation model", &
1109         &   references_str="Hogan, R. J., and A. Bozzo, 2018: A flexible and efficient radiation " &
1110         &   //"scheme for the ECMWF model. J. Adv. Modeling Earth Sys., 10, 1990–2008", &
1111         &   source_str="ecRad offline radiation model")
1112
1113    ! Define single-level variables
1114    call out_file%define_variable("solar_irradiance", &
1115         &   units_str="W m-2", long_name="Solar irradiance at Earth's orbit")
1116    if (present(lat)) then
1117      call out_file%define_variable("lat", &
1118           &   dim1_name="column", units_str="degrees_north", long_name="Latitude")
1119    end if
1120    if (present(lon)) then
1121      call out_file%define_variable("lon", &
1122           &   dim1_name="column", units_str="degrees_east", long_name="Longitude")
1123    end if
1124    call out_file%define_variable("skin_temperature", &
1125         &   dim1_name="column", units_str="K", long_name="Skin_temperature")
1126    if (config%do_sw) then
1127      call out_file%define_variable("cos_solar_zenith_angle", &
1128           &   dim1_name="column", units_str="1", &
1129           &   long_name="Cosine of the solar zenith angle")
1130    end if
1131
1132    if (allocated(single_level%sw_albedo_direct)) then
1133      call out_file%define_variable("sw_albedo", &
1134           &   dim2_name="column", dim1_name="sw_albedo_band", &
1135           &   units_str="1", long_name="Shortwave surface albedo to diffuse radiation")
1136            call out_file%define_variable("sw_albedo_direct", &
1137           &   dim2_name="column", dim1_name="sw_albedo_band", &
1138           &   units_str="1", long_name="Shortwave surface albedo to direct radiation")
1139    else
1140      call out_file%define_variable("sw_albedo", &
1141           &   dim2_name="column", dim1_name="sw_albedo_band", &
1142           &   units_str="1", long_name="Shortwave surface albedo")
1143     
1144    end if
1145    call out_file%define_variable("lw_emissivity", &
1146         &   dim2_name="column", dim1_name="lw_emissivity_band", &
1147         &   units_str="1", long_name="Longwave surface emissivity")
1148
1149    if (allocated(single_level%iseed)) then
1150      call out_file%define_variable("iseed", &
1151           &   dim1_name="column", units_str="1", is_double=.true., &
1152           &   long_name="Seed for random-number generator")
1153    end if
1154
1155    ! Define thermodynamic variables on half levels
1156    call out_file%define_variable("pressure_hl", &
1157         &   dim2_name="column", dim1_name="half_level", &
1158         &   units_str="Pa", long_name="Pressure")
1159    call out_file%define_variable("temperature_hl", &
1160         &   dim2_name="column", dim1_name="half_level", &
1161         &   units_str="K", long_name="Temperature")
1162
1163    ! Define gas mixing ratios on full levels
1164    call out_file%define_variable("q", &
1165         &   dim2_name="column", dim1_name="level", &
1166         &   units_str="1", long_name="Specific humidity")
1167    call out_file%define_variable("o3_mmr", &
1168         &   dim2_name="column", dim1_name="level", &
1169         &   units_str="1", long_name="Ozone mass mixing ratio")
1170    do jgas = 1,NMaxGases
1171      if (gas%is_present(jgas) .and. jgas /= IH2O .and. jgas /= IO3) then
1172        write(var_name,'(a,a)') trim(GasLowerCaseName(jgas)), '_vmr'
1173        write(long_name,'(a,a)') trim(GasName(jgas)), ' volume mixing ratio'
1174        call out_file%define_variable(trim(var_name), &
1175             &   dim2_name="column", dim1_name="level", &
1176             &   units_str="1", long_name=trim(long_name))
1177      end if
1178    end do
1179
1180    if (config%do_clouds) then
1181      ! Define cloud variables on full levels
1182      call out_file%define_variable("cloud_fraction", &
1183           &   dim2_name="column", dim1_name="level", &
1184           &   units_str="1", long_name="Cloud fraction")
1185      call out_file%define_variable("q_liquid", &
1186           &   dim2_name="column", dim1_name="level", &
1187           &   units_str="1", long_name="Gridbox-mean liquid water mixing ratio")
1188      call out_file%define_variable("q_ice", &
1189           &   dim2_name="column", dim1_name="level", &
1190           &   units_str="1", long_name="Gridbox-mean ice water mixing ratio")
1191      call out_file%define_variable("re_liquid", &
1192           &   dim2_name="column", dim1_name="level", &
1193           &   units_str="m", long_name="Ice effective radius")
1194      if (associated(cloud%re_ice)) then
1195        call out_file%define_variable("re_ice", &
1196             &   dim2_name="column", dim1_name="level", &
1197             &   units_str="m", long_name="Ice effective radius")
1198      end if
1199      if (allocated(cloud%overlap_param)) then
1200        call out_file%define_variable("overlap_param", &
1201             &  dim2_name="column", dim1_name="level_interface", &
1202             &  units_str="1", long_name="Cloud overlap parameter")
1203      end if
1204      if (allocated(cloud%fractional_std)) then
1205        call out_file%define_variable("fractional_std", &
1206             &  dim2_name="column", dim1_name="level", units_str="1", &
1207             &  long_name="Fractional standard deviation of cloud optical depth")
1208      end if
1209      if (allocated(cloud%inv_cloud_effective_size)) then
1210        call out_file%define_variable("inv_cloud_effective_size", &
1211             &   dim2_name="column", dim1_name="level", units_str="m-1", &
1212             &   long_name="Inverse of cloud effective horizontal size")
1213      end if
1214      if (allocated(cloud%inv_inhom_effective_size)) then
1215        call out_file%define_variable("inv_inhom_effective_size", &
1216             &  dim2_name="column", dim1_name="level", units_str="m-1", &
1217             &  long_name="Inverse of cloud inhomogeneity effective horizontal size")
1218      end if
1219    end if ! do_clouds
1220
1221    ! Define aerosol mass mixing ratio
1222    if (do_aerosol) then
1223      call out_file%define_variable("aerosol_mmr", &
1224           &   dim3_name="column", dim2_name="aerosol_type", &
1225           &   dim1_name="level", units_str="kg kg-1", &
1226           &   long_name="Aerosol mass mixing ratio")
1227    end if
1228
1229    ! Write variables
1230    call out_file%put("solar_irradiance", single_level%solar_irradiance)
1231    if (present(lat)) then
1232      call out_file%put("lat", lat)
1233    end if
1234    if (present(lon)) then
1235      call out_file%put("lon", lon)
1236    end if
1237    call out_file%put("skin_temperature", single_level%skin_temperature)
1238    if (config%do_sw) then
1239      call out_file%put("cos_solar_zenith_angle", single_level%cos_sza)
1240    end if
1241    call out_file%put("sw_albedo", single_level%sw_albedo)
1242    if (allocated(single_level%sw_albedo_direct)) then
1243      call out_file%put("sw_albedo_direct", single_level%sw_albedo_direct)
1244    end if
1245    call out_file%put("lw_emissivity", single_level%lw_emissivity)
1246    if (config%do_clouds .and. allocated(single_level%iseed)) then
1247      allocate(seed(ncol))
1248      seed = single_level%iseed
1249      call out_file%put("iseed", seed)
1250      deallocate(seed)
1251    end if
1252
1253    call out_file%put("pressure_hl", thermodynamics%pressure_hl)
1254    call out_file%put("temperature_hl", thermodynamics%temperature_hl)
1255
1256    allocate(mixing_ratio(ncol,nlev))
1257    call gas%get(IH2O, IMassMixingRatio, mixing_ratio)
1258    call out_file%put("q", mixing_ratio)
1259    call gas%get(IO3, IMassMixingRatio, mixing_ratio)
1260    call out_file%put("o3_mmr", mixing_ratio)
1261    do jgas = 1,NMaxGases
1262      if (gas%is_present(jgas) .and. jgas /= IH2O .and. jgas /= IO3) then
1263        write(var_name,'(a,a)') trim(GasLowerCaseName(jgas)), '_vmr'
1264        call gas%get(jgas, IVolumeMixingRatio, mixing_ratio)
1265        call out_file%put(trim(var_name), mixing_ratio)
1266      end if
1267    end do
1268    deallocate(mixing_ratio)
1269
1270    if (config%do_clouds) then
1271      call out_file%put("cloud_fraction", cloud%fraction)
1272      call out_file%put("q_liquid", cloud%q_liq)
1273      call out_file%put("q_ice", cloud%q_ice)
1274      call out_file%put("re_liquid", cloud%re_liq)
1275      if (associated(cloud%re_ice)) then
1276        call out_file%put("re_ice", cloud%re_ice)
1277      end if
1278      if (allocated(cloud%overlap_param)) then
1279        call out_file%put("overlap_param", cloud%overlap_param)
1280      end if
1281      if (allocated(cloud%fractional_std)) then
1282        call out_file%put("fractional_std", cloud%fractional_std)
1283      end if
1284      if (allocated(cloud%inv_cloud_effective_size)) then
1285        call out_file%put("inv_cloud_effective_size", cloud%inv_cloud_effective_size)
1286      end if
1287      if (allocated(cloud%inv_inhom_effective_size)) then
1288        call out_file%put("inv_inhom_effective_size", cloud%inv_inhom_effective_size)
1289      end if
1290    end if
1291
1292    if (do_aerosol) then
1293      allocate(aerosol_mmr(ncol, nlev, size(aerosol%mixing_ratio,3)))
1294      aerosol_mmr = 0.0_jprb
1295      aerosol_mmr(:,aerosol%istartlev:aerosol%iendlev,:) = aerosol%mixing_ratio
1296      call out_file%put("aerosol_mmr", aerosol_mmr)
1297      deallocate(aerosol_mmr)
1298    end if
1299
1300    ! Close the file
1301    call out_file%close()
1302
1303    if (lhook) call dr_hook('radiation_save:save_inputs',1,hook_handle)
1304   
1305  end subroutine save_inputs
1306
1307
1308  !---------------------------------------------------------------------
1309  ! Save shortwave diagnostics computed from "flux" to NetCDF
1310  ! file_name.  The "mapping" matrix maps from fluxes in bands or
1311  ! g-points to user specified spectral intervals, and should have
1312  ! been produced by config%get_sw_mapping. See the example in
1313  ! ecrad_driver.F90.
1314  subroutine save_sw_diagnostics(file_name, config, wavelength_bound, mapping, flux, &
1315       &                         iverbose, is_hdf5_file, experiment_name, &
1316       &                         is_double_precision)
1317
1318    use yomhook,                  only : lhook, dr_hook, jphook
1319
1320    use easy_netcdf
1321
1322    use radiation_io,             only : nulout
1323    use radiation_flux,           only : flux_type
1324    use radiation_config,         only : config_type
1325    use radiation_matrix,         only : sparse_x_dense
1326
1327    character(len=*),           intent(in) :: file_name
1328    type(config_type),          intent(in) :: config
1329    real(jprb),                 intent(in) :: wavelength_bound(:) ! m
1330    real(jprb),                 intent(in) :: mapping(:,:)
1331    type(flux_type),            intent(in) :: flux
1332    integer,          optional, intent(in) :: iverbose
1333    logical,          optional, intent(in) :: is_hdf5_file
1334    logical,          optional, intent(in) :: is_double_precision
1335    character(len=*), optional, intent(in) :: experiment_name
1336
1337    integer                                :: nwav ! Number of wavelength intervals
1338    real(jprb), allocatable                :: flux_out(:,:)
1339    type(netcdf_file)                      :: out_file
1340    integer                                :: ncol, n_lev_plus1
1341    integer                                :: i_local_verbose
1342
1343    real(jphook) :: hook_handle
1344
1345    if (lhook) call dr_hook('radiation_save:save_sw_diagnostics',0,hook_handle)
1346   
1347    if (present(iverbose)) then
1348      i_local_verbose = iverbose
1349    else
1350      i_local_verbose = config%iverbose
1351    end if
1352
1353        ! Open the file
1354    call out_file%create(trim(file_name), iverbose=i_local_verbose, is_hdf5_file=is_hdf5_file)
1355
1356    ! Set default precision for file, if specified
1357    if (present(is_double_precision)) then
1358      call out_file%double_precision(is_double_precision)
1359    end if
1360
1361    ! Define dimensions
1362    ncol = size(flux%sw_up,1)
1363    call out_file%define_dimension("column", ncol)
1364    nwav = size(wavelength_bound)-1
1365    call out_file%define_dimension("wavelength", nwav)
1366   
1367    ! Put global attributes
1368    call out_file%put_global_attributes( &
1369         &   title_str="Shortwave spectral diagnostics from the ecRad offline radiation model", &
1370         &   references_str="Hogan, R. J., and A. Bozzo, 2018: A flexible and efficient radiation " &
1371         &   //"scheme for the ECMWF model. J. Adv. Modeling Earth Sys., 10, 1990–2008", &
1372         &   source_str="ecRad offline radiation model")
1373
1374    ! Save "experiment" global attribute if present and not empty
1375    if (present(experiment_name)) then
1376      if (experiment_name /= " ") then
1377        call out_file%put_global_attribute("experiment", experiment_name)
1378      end if
1379    end if
1380
1381    ! Define variables
1382    call out_file%define_variable("wavelength1", dim1_name="wavelength", &
1383         units_str="m", long_name="Wavelength lower bound")
1384    call out_file%define_variable("wavelength2", dim1_name="wavelength", &
1385         units_str="m", long_name="Wavelength upper bound")
1386
1387    ! These are always available if
1388    ! config%do_surface_sw_spectral_flux=true, which is required for
1389    ! this routine
1390    call out_file%define_variable("flux_dn_sw_surf", &
1391         &  dim2_name="column", dim1_name="wavelength", &
1392         &  units_str="W m-2", long_name="Surface downwelling shortwave flux")
1393    call out_file%define_variable("flux_dn_direct_sw_surf", &
1394         &  dim2_name="column", dim1_name="wavelength", &
1395         &  units_str="W m-2", long_name="Surface downwelling direct shortwave flux")
1396    if (config%do_clear) then
1397      call out_file%define_variable("flux_dn_sw_surf_clear", &
1398           &  dim2_name="column", dim1_name="wavelength", &
1399           &  units_str="W m-2", long_name="Surface downwelling clear-sky shortwave flux")
1400      call out_file%define_variable("flux_dn_direct_sw_surf_clear", &
1401           &  dim2_name="column", dim1_name="wavelength", &
1402           &  units_str="W m-2", long_name="Surface downwelling clear-sky direct shortwave flux")
1403    end if
1404
1405    ! The following are only availble if
1406    ! config%do_save_spectral_flux=true
1407    if (allocated(flux%sw_up_band)) then
1408      call out_file%define_variable("flux_up_sw_toa", &
1409           &  dim2_name="column", dim1_name="wavelength", &
1410           &  units_str="W m-2", long_name="Top-of-atmosphere upwelling shortwave flux")
1411      call out_file%define_variable("flux_dn_sw_toa", &
1412           &  dim2_name="column", dim1_name="wavelength", &
1413           &  units_str="W m-2", long_name="Top-of-atmosphere downwelling shortwave flux")
1414      call out_file%define_variable("flux_up_sw_surf", &
1415           &  dim2_name="column", dim1_name="wavelength", &
1416           &  units_str="W m-2", long_name="Surface upwelling shortwave flux")
1417      if (allocated(flux%sw_up_clear_band)) then
1418        call out_file%define_variable("flux_up_sw_toa_clear", &
1419             &  dim2_name="column", dim1_name="wavelength", &
1420             &  units_str="W m-2", long_name="Top-of-atmosphere upwelling clear-sky shortwave flux")
1421        call out_file%define_variable("flux_up_sw_surf_clear", &
1422             &  dim2_name="column", dim1_name="wavelength", &
1423             &  units_str="W m-2", long_name="Surface upwelling clear-sky shortwave flux")
1424      end if
1425    end if
1426
1427    ! Write variables
1428    call out_file%put("wavelength1", wavelength_bound(1:nwav))
1429    call out_file%put("wavelength2", wavelength_bound(2:nwav+1))
1430
1431    n_lev_plus1 = size(flux%sw_up,2)
1432
1433    ! The mapping matrix is usually sparse, in which case we can check
1434    ! its elements before multiplying a column of bandwise fluxes by
1435    ! it.
1436#define USE_SPARSE_MATMUL 1
1437#ifdef USE_SPARSE_MATMUL
1438#define MY_MATMUL sparse_x_dense
1439#else
1440#define MY_MATMUL matmul
1441#endif
1442   
1443    flux_out = MY_MATMUL(mapping, flux%sw_dn_surf_band)
1444    call out_file%put("flux_dn_sw_surf", flux_out)
1445    flux_out = MY_MATMUL(mapping, flux%sw_dn_direct_surf_band)
1446    call out_file%put("flux_dn_direct_sw_surf", flux_out)
1447    if (config%do_clear) then
1448      flux_out = MY_MATMUL(mapping, flux%sw_dn_surf_clear_band)
1449      call out_file%put("flux_dn_sw_surf_clear", flux_out)
1450      flux_out = MY_MATMUL(mapping, flux%sw_dn_direct_surf_clear_band)
1451      call out_file%put("flux_dn_direct_sw_surf_clear", flux_out)
1452    end if
1453
1454    if (allocated(flux%sw_up_band)) then
1455      flux_out = MY_MATMUL(mapping, flux%sw_up_band(:,:,n_lev_plus1))
1456      call out_file%put("flux_up_sw_surf", flux_out)
1457      flux_out = MY_MATMUL(mapping, flux%sw_up_band(:,:,1))
1458      call out_file%put("flux_up_sw_toa", flux_out)
1459      flux_out = MY_MATMUL(mapping, flux%sw_dn_band(:,:,1))
1460      call out_file%put("flux_dn_sw_toa", flux_out)
1461      if (allocated(flux%sw_up_clear_band)) then
1462        flux_out = MY_MATMUL(mapping, flux%sw_up_clear_band(:,:,1))
1463        call out_file%put("flux_up_sw_toa_clear", flux_out)
1464        flux_out = MY_MATMUL(mapping, flux%sw_up_clear_band(:,:,n_lev_plus1))
1465        call out_file%put("flux_up_sw_surf_clear", flux_out)
1466      end if
1467    end if
1468
1469    call out_file%close()
1470   
1471    if (lhook) call dr_hook('radiation_save:save_sw_diagnostics',1,hook_handle)
1472
1473  end subroutine save_sw_diagnostics
1474 
1475end module radiation_save
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