source: BOL/script_install_amaury/install_lmdz.sh @ 5438

Last change on this file since 5438 was 5342, checked in by abarral, 5 weeks ago

Add message if modipsl tar retrieval fails
  • Property svn:executable set to *
File size: 39.9 KB
Line 
1#!/bin/bash
2set -eu  # error on command failure, and on unset variables
3export LC_ALL=C  # standardize awk format
4
5###########################################################################
6# Author : Laurent Fairhead et Frédéric Hourdin
7# Usage  : install_lmdz.sh -help
8#
9# bash installation script of the LMDZ model on different computer types :
10# Linux PC, "mesocentre" (IPSL-UPMC, IPSL-X), super-computer (IDRIS)
11#
12# The model is downloaded in the following directory tree
13# $MODEL/modipsl/modeles/...
14# using the "modipsl" infrastructure created by the "IPSL"
15# for coupled (atmosphere/ocean/vegetation/chemistry) climate modeling
16# activities.
17# Here we only download atmospheric (LMDZ) and vegetation (ORCHIDEE)
18# components.
19#
20# The sources of the models can be found in the "modeles" directory.
21# In the present case, LMDZ, ORCHIDEE, and IOIPSL or XIOS (handling of
22# input-outputs using the NetCDF library).
23#
24# The script downloads various source files (including a version of NetCDF)
25# and utilities, compiles the model, and runs a test simulation in a
26# minimal configuration.
27#
28# Prerequisites : gfortran, bash or ksh, wget, gunzip, tar, ...
29#
30# Modif 18/11/2011
31#    changes for option real 8.
32#      We compile with -r8 (or equivalent) and -DNC_DOUBLE for the GCM
33#      but with -r4 for netcdf. Variable real must be set to
34#      r4 or r8 at the beginning of the script below.
35#
36###########################################################################
37
38### Functions
39
40function myget {
41  # Get a file from LMDZ repository, make it executable if .(ba)sh
42  local url=$1
43
44  local filename
45  filename=$(basename "$url")
46
47  wget --no-check-certificate -nv "http://lmdz.lmd.jussieu.fr/pub/$url"
48  if [[ $filename =~ .*\.(ba)?sh ]]; then chmod +x "$filename"; fi
49}
50
51function do_compile_sh {
52  local component=$1
53  local command=$2
54  local log
55
56  log="$(pwd)/$component.log"
57  echo "$command" > compile.sh
58  echo "Compiling $component using $(\cat compile.sh) (log: $log) $(date)"
59    chmod +x ./compile.sh
60    if ! ./compile.sh &> "$log"; then
61        echo "STOP: $component compilation failed, exiting"; exit 1
62    fi
63    echo "Finished $component compilation $(date)"
64}
65
66function get_svn_branch {
67  local url=$1
68  local rev=$2
69  local res
70
71  res=$(svn log -v -q "$url" -r "$rev" -l 1 | cut -d "/" -f -4)
72  if echo "$res" | grep -q "/trunk/"; then
73    res=$(echo "$res" | grep "/trunk/" | head -1 | cut -d "/" -f 2-3)
74  elif echo "$res" | grep -q "/branches/"; then
75    res=$(echo "$res" | grep "/branches/" | head -1 | cut -d "/" -f 2-4)
76  else
77    echo "Could not determine svn branch for $url, r=$rev"
78  fi
79  echo "$res"
80}
81
82function set_default_params {
83    # Valeur par défaut des parametres
84    svn_lmdz=""
85    version="20240508.CM7"
86
87    netcdf=1
88    bench=1
89    SCM=0
90    veget="none"
91    grid_resolution="32x32x39"
92    benchphysiq=""
93    compphysiq="lmd"
94    is_1D="n"
95    fortran_file="gcm"
96
97    parallel="none"
98    trusting="testing"
99    MODEL=""
100
101    with_xios=0
102    opt_makelmdz_xios=""
103
104    icolmdz=0
105    dynamico_commit="11001689"
106
107    rad="rrtm"
108
109    compile_with_fcm=1
110
111    cosp="none"
112    aerosols=0
113    strataer=0
114    inlandsis=0
115
116    make_j=8
117    clean_install=1
118    local="$(pwd)"
119
120    # Check if on a Mac /!\ Probably doesn't work anymore, to fix one day...
121    if [[ $(uname) = "Darwin" ]]; then
122        export MAKE="make"
123    fi
124
125    optim_flag="-prod"
126    arch="local"
127
128    arch="local-gfortran"
129    arch_dir=""
130
131    jobcmd=""
132}
133
134function read_cmdline_args {
135    while (($# > 0)); do
136        case $1 in
137            "-h") cat <<........fin
138        $0 [ -v version ] [ -r svn_release ]
139               [ -parallel PARA ] [ -d GRID_RESOLUTION ] [ -bench 0/1 ]
140               [-name LOCAL_MODEL_NAME] [-rad RADIATIF]
141
142        -v       "version" like 20150828.trunk, see http://www.lmd.jussieu.fr/~lmdz/Distrib/LISMOI.trunk (default <$version>)
143
144        -r       "svn_release" : either the svn release number or "last" (default <$svn_lmdz>)
145
146        -parallel parallel support: mpi, omp, mpi_omp (mpi with openMP) or none (default: <$parallel>)
147
148        -d        "grid resolution": should be among the available benchs if -bench 1 (valid values: 48x36x19, 48x36x39) (default : <$grid_resolution>)
149
150        -bench     activating the bench or not (0/1) (default: <$bench>)
151
152        -unstable  use unstable tar instead of testing
153
154        -name      name of the folder to install to (default <$MODEL>)
155
156        -netcdf    0, 1 or PATH. 0: do not download NetCDF, look for it in standard locations (/usr);  1: download and compile NetCDF; PATH: full path to an existing installed NetCDF library (default: <$netcdf>)
157
158        -xios      use (download and compile) the XIOS library (will compile the parallel NetCDF4-HDF5 library) (requires to also have -parallel mpi_omp)
159
160        -cosp       to run with cospv1 or cospv2 [none/v1/v2] (default <$cosp>)
161
162        -rad        radiative code: oldrad, rrtm or ecrad (default <$rad>)
163
164        -nofcm      to compile without fcm
165
166        -SCM        install 1D version automatically
167
168        -debug      compile everything in debug mode
169
170        -benchphysiq   to choose which physics.def package to use in the bench (default <$benchphysiq>)
171
172        -compilephysiq   physics to compile the model with (default <$compphysiq>)
173
174        -veget      surface/vegetation scheme treatment controlled by the single variable veget which can have the following values: none: bucket scheme (default); CMIP6 | veget2.0: orchidee version used in CMIP exercise, rev 5661; veget2.2: orchidee branch 2.2, rev 8529 (bundled); number: orchidee version number  [only orch>2.0] (default $veget)
175
176        -spla       activate interactive aerosols
177
178        -inlandsis  activate new snow scheme
179
180        -arch       name of the arch to use (default <$arch>)
181
182        -arch_dir   where to find the arch files (default <$arch_dir>)
183
184        -make_j     number of processes to parallelize installations (default <$make_j>)
185
186        -jobcmd     command prepended to fcm compile jobs, e.g. "srun" (default <$jobcmd>)
187
188        -noclean    will only download necessary files (but no thorough check is made on the integrity of existing files), and will recompile everything (very quick if it's already been compiled before)
189
190        -icolmdz    to compile the icolmdz executable as well as the lonlat one
191
192........fin
193                  exit 1;;
194            "-v") version=$2; shift; shift;;
195            "-r") svn_lmdz=$2; shift; shift;;
196            "-d") grid_resolution=$2; shift; shift;;
197            "-unstable") trusting="unstable"; shift;;
198            "-cosp") cosp=$2
199                     case $cosp in
200                         "none"|"v1"|"v2") cosp=$2; shift; shift;;
201                         *) echo "Only none v1 v2 for cosp option"; exit 1
202                     esac;;
203            "-nofcm") compile_with_fcm=0; echo "This option will be reactivated soon (promesse du 8dec2022)"; exit 1;  shift;;
204            "-SCM") SCM=1; shift;;
205            "-rad") rad=$2
206                    case $rad in
207                        "oldrad"|"rrtm"|"ecrad") rad=$2; shift; shift;;
208                        *) echo "Only oldrad rrtm ecrad for rad option"; exit 1
209                    esac;;
210            "-parallel") parallel=$2
211                         case $parallel in
212                             "none"|"mpi"|"omp"|"mpi_omp") parallel=$2; shift; shift;;
213                             *) echo "Only none mpi omp mpi_omp for the parallel option"; exit 1
214                         esac;;
215            "-bench") bench=$2; shift; shift;;
216            "-debug") optim_flag="-debug"; shift;;
217            "-name") MODEL=$2; shift; shift;;
218            "-netcdf") netcdf=$2; shift; shift;;
219            "-benchphysiq") benchphysiq=$2; shift; shift;;
220            "-compilephysiq") compphysiq=$2; shift; shift;;
221            "-xios") with_xios=1; shift;;
222            "-arch") arch=$2; shift; shift;;
223            "-arch_dir") arch_dir=$2; shift; shift;;
224            "-veget") veget=$2; shift; shift;;
225            "-spla") aerosols=1; shift;;
226            "-strataer") strataer=1; shift;;
227            "-inlandsis") inlandsis=1; shift;;
228            "-make_j") make_j=$2; shift; shift;;
229            "-jobcmd") jobcmd=$2; shift; shift;;
230            "-noclean") clean_install=0; shift;;
231            "-icolmdz") icolmdz=1; shift;;
232            *)  bash install_lmdz.sh -h; exit 1
233        esac
234    done
235
236    # Isotopes : Compile and run with isotopes if lmdz_phys="lmdiso" in main.sh
237    if [[ $compphysiq = "lmdiso" ]]; then isotopes=1; else isotopes=0; fi
238
239    # Option de compilation pour Cosp
240    case $cosp in
241        v1) opt_cosp="-cosp true";;
242        v2) opt_cosp="-cospv2 true";;
243        *) opt_cosp=""
244    esac
245
246    #Define veget-related suffix for gcm name
247    if [[ $veget = 'none' ]]; then
248        suff_orc=''
249    else
250        suff_orc='_orch'
251    fi
252
253
254    if [[ $parallel = "none" ]]; then
255        suff_para='_seq'
256    else
257        suff_para='_para_mem'
258    fi
259
260    if [[ $with_xios = 1 ]]; then opt_makelmdz_xios="-io xios"; fi
261
262    if [[ $aerosols = 1 ]]; then
263      opt_aer="-dust true"; suff_aer="_spla"
264    else
265      opt_aer=""; suff_aer=""
266    fi
267
268    if [[ $strataer = 1 ]]; then
269      opt_strataer="-strataer true"
270    else
271      opt_strataer=""
272    fi
273
274    if [[ $inlandsis = 1 ]]; then
275       opt_inlandsis="-inlandsis true"
276    else
277       opt_inlandsis=""
278    fi
279
280    if [[ $isotopes = 1 ]]; then
281      opt_isotopes="-isotopes true"; suff_iso="_iso"
282    else
283      opt_isotopes="" ; suff_iso=""
284    fi
285
286    # set default arch if parallel
287    if [[ $arch = "local-gfortran" && $parallel != "none" ]]; then
288      arch="local-gfortran-parallel"
289      echo "Switching default arch to $arch"
290    fi
291
292    # Name of the model's folder. The convention taken here is that models that requires different compilation sources should have a different names.
293    local xios_name=""
294    if [[ $with_xios = 1 ]]; then xios_name="XIOS"; fi
295    if [[ $MODEL = "" ]]; then MODEL="./LMDZ$version${svn_lmdz}OR$veget$xios_name"; fi
296
297    if [[ $arch_dir = "" ]]; then
298      arch_dir="$MODEL/modipsl/config/IPSLCM7/ARCH/";
299    elif ! readlink -fe "$arch_dir" >/dev/null; then
300      echo "STOP: no arch dir <$arch_dir>"; exit 1
301    fi
302
303    if ! (echo "$grid_resolution" | grep -q "x"); then
304      is_1D="y"
305      fortran_file="lmdz1d"
306    fi
307}
308
309function ensure_correct_option_combinations {
310    # Check on veget version
311    if [[ $veget != 'none' && $veget != "CMIP6" && $veget != "orch2.0" && $veget != "orch2.2" ]]; then
312        re='^[0-9]+$'
313        if ! [[ $veget =~ $re ]]; then
314            echo 'Valeur de l option veget non valable'; exit 1
315        fi
316    fi
317
318    ## if compiling icolmdz, XIOS must be set
319    if [[ $icolmdz = 1 && $with_xios = 0 ]]; then
320      echo "Error, you must set -xios to compile the icolmdz executable"; exit 1
321    fi
322    ## if also compiling XIOS, parallel must be mpi_omp
323    if [[ $with_xios = 1 && $parallel != "mpi_omp" ]]; then
324        echo "Error, you must set -parallel mpi_omp if you want XIOS"; exit 1
325    fi
326
327    if [[ $cosp = "v2" && $with_xios = 0 ]]; then
328        echo "Error, Cospv2 cannot run without Xios"; exit 1
329    fi
330
331    # STOP if trying to use both ORCHIDEE and Isotopes :
332    if [[ $isotopes = 1 && $veget != "none" ]]; then
333      echo "STOP: You cannot run LMDZ with ORCHIDEE and ISOtopes at the same time"; exit 1
334    fi
335
336    # STOP if trying to use both SPLA and Isotopes :
337    if [[ $isotopes = 1 && $aerosols = 1 ]]; then
338      echo "STOP: You cannot run LMDZ with Isotopes and aerosols=spla at the same time"; exit 1
339    fi
340
341    # (Temporary) STOP if trying to use Isotopes with XIOS :
342    if [[ $isotopes = 1 && $with_xios = 1 ]]; then
343      echo "STOP: Isotopes cannont yet be run with XIOS"; exit 1
344    fi
345
346    if [[ $aerosols = 1 && $rad != "rrtm" ]]; then
347      echo "STOP: For the time being, <aerosols=spla> requires <rad=rrtm>"; exit 1
348    fi
349}
350
351function check_available_software {
352    local required_soft=("wget" "tar" "gzip" "make" "gcc" "cmake" "m4" "c++")
353    echo "Checking if required software is available (${required_soft[*]})"
354    for logiciel in "${required_soft[@]}"; do
355        if [[ $(which "$logiciel") = "" ]]; then
356            echo "You must first install $logiciel on your system"; exit 1
357        fi
358    done
359
360    cat <<eod > tt.f90
361print*,'coucou'
362end
363eod
364    $compiler tt.f90 || a.out
365    ./a.out >| tt
366    if [[ $(< tt sed -e 's/ //g' ) != "coucou" ]]; then
367        echo "problem installing with compiler $compiler"; exit 1
368    fi
369    rm tt a.out tt.f90
370}
371
372function download_modipsl_tar {
373    if [[ $clean_install = 1 ]]; then rm -rf "$MODEL"; fi
374
375    mkdir -p "$MODEL"
376    MODEL=$(readlink -e -f "$MODEL"); echo "MODEL: $MODEL"  # absolute path
377    if [[ ! -d "$MODEL/modipsl" ]]; then
378        echo "Downloading a slightly modified version of modipsl+LMDZ"
379        cd "$MODEL"
380        getlog="$(pwd)/get.log"
381        echo "logfile : $getlog"
382        set +e; myget "src_archives/$trusting/modipsl.$version.tar.gz" &>> "$getlog"; set -e
383        if [[ ! -f "modipsl.$version.tar.gz" ]]; then
384          echo "STOP: failed to download modipsl. $getlog: <$(tail "$getlog")>"; exit 1
385        fi
386        echo "install_lmdz.sh wget_OK $(date)"
387
388        gunzip "modipsl.$version.tar.gz" &>> get.log
389        tar xf "modipsl.$version.tar" &>> get.log
390        rm "modipsl.$version.tar"
391    fi
392}
393
394function init_arch {
395    cd "$local"
396    set +e; arch_dir=$(readlink -f "$arch_dir"); set -e  # full path. readlink must be called *after* the path is created
397
398    # Check where default fcm, path, env are located - by default in $arch_path, instead in $MODEL/modipsl/modeles/LMDZ/arch/
399    local i fcm_path path_path env_path
400    for i in "path" "fcm" "env"; do
401      local varname=${i}_path
402      if [[ -f $arch_dir/arch-$arch.$i ]]; then
403          declare $varname="$arch_dir/arch-$arch.$i"
404      else
405          declare $varname="$MODEL/modipsl/modeles/LMDZ/arch/arch-$arch.$i"
406          if [[ ! -f ${!varname} ]]; then
407              echo "STOP: no ${!varname}"; exit 1
408          fi
409      fi
410    done
411    default_fcm_path=$fcm_path
412    default_path_path=$path_path
413    default_env_path=$env_path
414
415    # check compiler
416    compiler=$(< "$default_fcm_path" grep "%COMPILER" | sed -e "s/%COMPILER\s*//")
417
418    # load env
419    # shellcheck disable=SC1090
420    if [[ -f $default_env_path ]]; then source "$default_env_path"; fi
421
422    local mpi_file  # can't be done before as it depends on sourcing the env
423    mpi_file=$(readlink -e -f "$(which mpif90)")
424    path_mpi=$(dirname "$mpi_file")
425    root_mpi=$(dirname "$path_mpi")
426}
427
428function install_arch {
429    local component=$1
430
431    # Use same .env for all components (for module compatibility)
432    cp -f "$default_env_path" "$MODEL/modipsl/modeles/$component/arch" &> /dev/null || true  # allow failure if we're copying the file to itself
433
434    # Use local .path and .fcm if available, otherwise default
435    if [[ ! -f "$MODEL/modipsl/modeles/$component/arch/arch-$arch.path" ]]; then
436        cp -f "$default_path_path" "$MODEL/modipsl/modeles/$component/arch"
437
438        if [[ $component = "ORCHIDEE" ]]; then
439            if [[ $orcbranch = "/tags/ORCHIDEE_2_0/ORCHIDEE" ]]; then  # 2.0 and before have a different fcm convention
440                sed -i'' -e "s/-I//" -e "s/-L//" "$MODEL/modipsl/modeles/ORCHIDEE/arch/arch-$arch.path"  # /!\ we only replace first occurence on purpose
441            fi
442        fi
443    fi
444    if [[ ! -f "$MODEL/modipsl/modeles/$component/arch/arch-$arch.fcm" ]]; then
445        cp -f "$default_fcm_path"  "$MODEL/modipsl/modeles/$component/arch"
446
447        if [[ $component = "XIOS" ]]; then
448            # Adapt for XIOS, which uses different naming conventions
449            sed -i'' -e "s/%COMPILER/%FCOMPILER/" -e "s/%LINK/%LINKER/" -e "s/-fdefault-real-8//" "$MODEL/modipsl/modeles/XIOS/arch/arch-$arch.fcm"
450        fi
451    fi
452}
453
454function install_netcdf {
455    echo "Installing Netcdf"
456    local ncdf_compiler="$compiler"
457
458    if [[ $netcdf = 0 ]]; then
459        ncdfdir=$(nf-config --prefix)
460    else
461        cd "$MODEL"
462
463        # Convert non-basic compiler
464        case $compiler in
465            mpif90) ncdf_compiler=$($compiler --version | head -n 1 | cut -d " " -f -1)
466        esac
467
468        case $ncdf_compiler in
469            gfortran | GNU) ncdf_compiler="gfortran"; opt1="-compiler gnu"; opt2="-CC gcc -FC gfortran -CXX g++";;
470            *)      echo "unexpected compiler $ncdf_compiler for netcdf"; exit 1
471        esac
472
473        case $with_xios in
474            0) script_install_netcdf="install_netcdf4_hdf5_seq.bash"
475               ncdfdir="netcdf4_hdf5_seq"
476               opt_="$opt1";;
477            1) script_install_netcdf="install_netcdf4_hdf5.bash"
478               ncdfdir="netcdf4_hdf5"
479               opt_="$opt2 -MPI $root_mpi";;
480            *) echo "with_xios=$with_xios, should be 0 or 1"; exit 1
481        esac
482        if [[ $netcdf = 1 ]]; then
483           ncdfdir="$MODEL/$ncdfdir"
484        else
485           mkdir -p "$netcdf"; ncdfdir="$netcdf/$ncdfdir"
486        fi
487
488        echo "Repertoire netcdf $ncdfdir"
489        if [[ ! -d $ncdfdir ]]; then
490            netcdflog=$(pwd)/netcdf.log
491            echo "----------------------------------------------------------"
492            echo "Compiling the Netcdf library"
493            echo "----------------------------------------------------------"
494            echo "log file : $netcdflog"
495            myget script_install/$script_install_netcdf &>> "$netcdflog"
496            chmod u=rwx $script_install_netcdf
497            # shellcheck disable=SC2086
498            ./$script_install_netcdf -prefix "$ncdfdir" $opt_ &>> "$netcdflog"
499        fi
500
501        # Add to path
502        export PATH="$ncdfdir/bin:$PATH"
503        echo "Bin PATH" $PATH
504
505        #----------------------------------------------------------------------------
506        # LF rajout d'une verrue, pour une raison non encore expliquee,
507        # la librairie est parfois rangée dans lib64 et non dans lib
508        # par certains compilateurs
509        if [[ ! -e lib && -d lib64 ]]; then ln -s lib64 lib; fi
510        #----------------------------------------------------------------------------
511
512        echo "install_lmdz.sh netcdf_OK $(date)"
513    fi
514
515    cat >test_netcdf90.f90 <<EOF
516    use netcdf
517    print *, "NetCDF library version: ", nf90_inq_libvers()
518    end
519EOF
520
521    if $ncdf_compiler -I"$ncdfdir"/include test_netcdf90.f90 -L"$ncdfdir"/lib -lnetcdff -lnetcdf -Wl,-rpath="$ncdfdir"/lib && ./a.out; then
522        rm test_netcdf90.f90 a.out
523    else
524        cat <<EOF
525Failed test program using NetCDF-Fortran. You can:
526- check that you have NetCDF-Fortran installed in your system
527- or specify an installation directory with option -netcdf of install_lmdz.sh
528- or download and compile NetCDF-Fortran with option -netcdf 1 of install_lmdz.sh
529EOF
530        exit 1
531    fi
532
533    # Compile NetCDF95
534    cd "$MODEL/modipsl/modeles/LMD"*
535    echo "Installing NetCDF95"
536    cd "$MODEL"
537    if [[ ! -d "NetCDF95-0.3" ]]; then
538        myget src_archives/netcdf/NetCDF95-0.3.tar.gz
539        tar -xf NetCDF95-0.3.tar.gz
540        rm NetCDF95-0.3.tar.gz
541        cd NetCDF95-0.3
542        mkdir -p build && cd build
543        netCDF_INCLUDE_DIR=$(nc-config --includedir) netCDF_LIBRARY=$(nc-config --libdir) cmake .. -DCMAKE_BUILD_TYPE=Release -DCMAKE_PREFIX_PATH="$ncdfdir" -DCMAKE_INSTALL_PREFIX="$MODEL/modipsl"
544        make install
545    fi
546}
547
548function install_IOIPSL {
549    install_arch "IOIPSL"
550
551    cd "$MODEL/modipsl/modeles/IOIPSL"
552    ioipsllog="$(pwd)/ioipsl.log"
553    echo "Compiling IOIPSL, the interface library with Netcdf $(date) (log: $ioipsllog)"
554# in case ksh is not installed on the pc
555    if [[ ! -x /bin/ksh ]]; then
556      sed -i''  -e 's/ksh/bash/' ins_m_prec
557    fi
558    echo "$jobcmd ./makeioipsl_fcm -j $make_j -arch $arch $optim_flag" > compile.sh
559    chmod +x compile.sh
560    echo "Compiling IOIPSL using $(\cat compile.sh)"
561    if ! ./compile.sh &> "$ioipsllog"; then
562        echo "STOP: IOIPSL compile failed, exiting"; exit 1
563    fi
564
565    # Link to modipsl/bin
566    cp -f bin/* ../../bin
567
568    echo "IOIPSL compiled $(date)"
569}
570
571function install_XIOS {
572    if [[ $with_xios = 1 ]]; then
573        cd "$MODEL/modipsl/modeles"
574        xioslog="$(pwd)/XIOS/xios.log"
575        echo "##########################################################"
576        echo "Compiling XIOS (log $xioslog) $(date)"
577        echo "##########################################################"
578
579        # Download XIOS
580        local xios_http="http://forge.ipsl.fr/ioserver/svn/XIOS2/branches/xios-2.6"
581        local xios_rev="2568"
582       
583        cd "$MODEL/modipsl/modeles"
584        set +e; svn co -r $xios_rev $xios_http XIOS; set -e
585
586        cd XIOS
587
588        install_arch "XIOS"
589        do_compile_sh "XIOS" "$jobcmd ./make_xios --job $make_j --arch $arch"
590    fi
591}
592
593function get_orchidee_version {  # Set / Check ORCHIDEE version
594    echo "Checking Orchidee source version"
595    local fetch_rev=""
596    orcbranch=""
597    case $veget in
598        "none") fcm_veget_version="false";;
599        "orch2.0" | "CMIP6") fcm_veget_version=orchidee2.0; fetch_rev=7906;;  # in previous tar we used 6592 but with some modifications to xios_orchidee.f90, which got integrated in 7906
600        "orch2.2") fcm_veget_version=orchidee2.1; orcbranch="/branches/ORCHIDEE_2_2/ORCHIDEE" ;; # the bundled version
601        *) fetch_rev=$veget; fcm_veget_version=orchidee2.1;;  # /!\ arbitary rev only works for orch>=2.1
602          # /!\ Note: for orch>=4, we should be using fcm_vegt_version="orchideetrunk". Below copied comment by Adriana in LMDZ_Setup docs:
603#          Avec orchidee2.1, on va compiler LMDZ avec le cle cpp ORCHIDEE_NOLIC. On ne va donc pas prendre en compte les avancements fait dans le trunk qui permet que les fractions lic soitent traité par ORCHIDEE. Ca marche très bien sans cela puisque dans tout façon c'est en cours de développement et ce n'est pas activé par default. En fait on devrait compiler le trunk avec -v orchideetrunk mais avec landice_opt>2, ce qui ne change rien par rapport à orchidee2.1
604#Si on voudrait activer landice_opt=2 , il faut compiler avec -v orchideetrunk.
605
606    esac
607
608    if [[ -n $fetch_rev ]]; then
609        echo "IF YOU INSTALL ORCHIDEE THE VERY FIRST TIME, ASK for PASSWORD at orchidee-help@listes.ipsl.fr"
610        local curr_rev
611        curr_rev=$(svn info "$MODEL/modipsl/modeles/ORCHIDEE" | grep Revision: | cut -d ":" -f 2 | cut -c 2-)
612        orcbranch=$(svn log -v -q svn://forge.ipsl.fr/orchidee/ -r "$fetch_rev" | grep ORCHIDEE | head -1 | sed -e 's:ORCHIDEE/.*$:ORCHIDEE:' | awk '{print $2}')
613        if [[ $fetch_rev != "$curr_rev" ]]; then
614            echo "Fetching orch $fetch_rev from the repository (curr: $curr_rev)"
615            echo "branch is $orcbranch"
616            if [[ $fetch_rev -lt 4465 ]]; then echo 'ORCHIDEE version must be >=4465, exiting'; exit 1; fi
617            cd "$MODEL/modipsl/modeles"
618            rm -rf ORCHIDEE
619            svn co -r "$fetch_rev" "svn://forge.ipsl.fr/orchidee/$orcbranch"
620            cd - > /dev/null
621        fi
622    fi
623
624    # Check parallel LMDZ+ORCH
625    if [[ (! $veget = "none") && $parallel = "none" && ($used_lmdz_rev -lt 4894) ]]; then
626        echo "LMDZ revision must be >=4894 for orchidee without parallel support. Upgrade lmdz or use -parallel mpi_omp."; exit 1
627    fi
628}
629
630function compile_orchidee {
631    install_arch "ORCHIDEE"
632
633    if [[ $veget != "none" ]]; then
634        cd "$MODEL/modipsl/modeles/ORCHIDEE"
635
636        local xios_orchid
637        if [[ $with_xios = 1 ]]; then
638            xios_orchid="-xios";
639        else
640            xios_orchid="-noxios"
641        fi
642
643        if [[ $parallel != "none" && ! -d src_parallel ]]; then
644           echo "STOP: Orchidee version too old for parallel support"; exit 1
645        fi
646        do_compile_sh "ORCHIDEE" "$jobcmd ./makeorchidee_fcm -j $make_j $xios_orchid $optim_flag -parallel $parallel -arch $arch"
647    fi
648}
649
650function get_lmdz_version {
651    echo "Checking LMDZ source version"
652    LMDZPATH=$(readlink -e -f "$MODEL/modipsl/modeles/LMD"*)
653    cd "$LMDZPATH"
654
655    if [[ -n $svn_lmdz ]]; then
656        local curr_rev
657        curr_rev=$(svn info "$MODEL/modipsl/modeles/LMD"* | grep Revision: | cut -d ":" -f 2 | cut -c 2-)
658        if [[ $svn_lmdz != "$curr_rev" ]]; then
659            local lmdzbranch
660            echo "Fetching LMDZ $svn_lmdz from the repository"
661            lmdzbranch=$(get_svn_branch "https://svn.lmd.jussieu.fr/LMDZ" "$svn_lmdz")
662            echo "branch is $lmdzbranch"
663            cd "$MODEL/modipsl/modeles"
664            rm -rf LMD*
665            svn co -r "$svn_lmdz" "https://svn.lmd.jussieu.fr/LMDZ/$lmdzbranch" LMDZ
666            cd - > /dev/null
667        fi
668        used_lmdz_rev=$svn_lmdz
669    else  # get svn from info
670        set +e; used_lmdz_rev=$(svn info | grep "Last Changed Rev" | cut -c 19-); set -e
671        if [[ -z $used_lmdz_rev ]]; then  # svn info failed
672            used_lmdz_rev=$(grep 'Revision: [0-9]' "$MODEL"/Read*.md | awk ' { print $2 } ' 2>/dev/null)
673            if [[ -z $used_lmdz_rev ]]; then echo "Could not determine lmdz version. This is likely an issue with the .tar itself, please report to LMDZ team."; exit 1; fi
674        fi
675    fi
676}
677
678function compile_lmdz {
679    install_arch "LMDZ"
680    cd "$LMDZPATH"
681
682    if [[ $used_lmdz_rev -le 4185 ]]; then
683        exe_name="bin/${fortran_file}_${grid_resolution}_phy${compphysiq}_${suff_para}${suff_orc}${suff_aer}${suff_iso}.e"
684    else
685        exe_name="bin/${fortran_file}_${grid_resolution}_phy${compphysiq}_${rad}${suff_para}${suff_orc}${suff_aer}${suff_iso}.e"
686    fi
687
688    local opt_rad
689    case $rad in
690        oldrad) iflag_rrtm=0; NSW=2; opt_rad="";;
691        rrtm)   iflag_rrtm=1; NSW=6
692            if [[ $used_lmdz_rev -le 4185 ]]; then
693                opt_rad="-rrtm true"
694            else
695                opt_rad="-rad rrtm"
696            fi;;
697        ecrad)  iflag_rrtm=2; NSW=6; opt_rad="-rad ecrad";;
698        *) echo "Only oldrad rrtm ecrad for rad option"; exit 1
699    esac
700    if [[ $used_lmdz_rev -le 4185 && $rad = "ecrad" ]]; then
701        echo "ecrad only available for LMDZ rev starting with 4186 "; exit 1
702    fi
703
704    # Compile
705    local makelmdz="makelmdz_fcm $optim_flag -arch $arch -j $make_j"
706    local para_compile_opt="-mem -parallel $parallel"; if [[ $parallel = "none" ]]; then para_compile_opt=""; fi
707    do_compile_sh "LMDZ" "$jobcmd ./$makelmdz $opt_rad $opt_cosp $opt_makelmdz_xios $opt_aer $opt_inlandsis $opt_strataer $opt_isotopes -p $compphysiq -d ${grid_resolution} -v $fcm_veget_version $para_compile_opt $fortran_file"
708
709    # Check executable
710    if [[ ! -f $exe_name ]]; then
711        echo "STOP: Compilation failed, can't find the executable"; exit 1
712    else
713        echo "Compilation successful, the executable is $exe_name $(date)"
714    fi
715}
716
717function get_dynamico_icosa_version {
718  if [[ $icolmdz = 1 ]]; then
719    echo "Checking DYNAMICO source version"
720    cd "$MODEL/modipsl/modeles"
721    if [[ ! -d DYNAMICO ]]; then
722      git clone https://gitlab.in2p3.fr/ipsl/projets/dynamico/dynamico.git DYNAMICO
723    fi
724    cd DYNAMICO
725    git checkout master && git checkout $dynamico_commit
726    cd - > /dev/null
727
728    echo "Checking ICOSA_LMDZ source version"
729    if [[ ! -d ICOSA_LMDZ ]]; then
730      svn checkout http://svn.lmd.jussieu.fr/LMDZ/ICOSA_LMDZ
731    fi
732    cd ICOSA_LMDZ
733    svn up -r 5320
734  fi
735}
736
737function compile_icolmdzor {
738    if [[ $icolmdz = 1 ]]; then
739      install_arch "ICOSA_LMDZ"
740      local para_compile_opt="-parallel $parallel"; if [[ $parallel = "none" ]]; then para_compile_opt=""; fi
741
742      # LMDZ physics package library already available in LMDZ/config/lib directory
743
744      # Compile DYNAMICO
745      cd "$MODEL/modipsl/modeles/DYNAMICO"
746
747      # Need to get rather than install the archs as DYNAMICO uses FCMv2 that does not understand the makefile syntax ($shell)
748      cd arch
749      wget "http://lmdz.lmd.jussieu.fr/pub/src_archives/misc/arch/DYNAMICO/arch-$arch.env"
750      wget "http://lmdz.lmd.jussieu.fr/pub/src_archives/misc/arch/DYNAMICO/arch-$arch.fcm"
751      wget "http://lmdz.lmd.jussieu.fr/pub/src_archives/misc/arch/DYNAMICO/arch-$arch.path"
752      cd ..
753
754      do_compile_sh "DYNAMICO" "$jobcmd ./make_icosa $optim_flag -arch $arch -job $make_j $para_compile_opt -external_ioipsl -with_xios"
755
756      # Compile icosa_lmdz
757      echo "Bin PATH before icosalmdz" "$PATH"
758      cd "$MODEL/modipsl/modeles/ICOSA_LMDZ"
759      do_compile_sh "ICOSA_LMDZ" "$jobcmd ./make_icosa_lmdz -arch $arch -j $make_j -nodeps -p lmd $optim_flag $para_compile_opt -with_orchidee"
760      echo "# Running environment for icosa_lmdz" > icosalmdz.env
761      echo "# "                                   >> icosalmdz.env
762      if [[ -v LD_LIBRARY_PATH ]]; then 
763        echo "export LD_LIBRARY_PATH=$ncdfdir/lib:$LD_LIBRARY_PATH" >> icosalmdz.env
764      else 
765        echo "export LD_LIBRARY_PATH=$ncdfdir/lib" >> icosalmdz.env
766      fi
767    fi
768}
769
770function run_bench {
771    local bench_cmd="./bench.sh"
772
773    cd "$MODEL/modipsl/modeles/LMDZ"*
774
775    if [[ $bench = "tuto" ]]; then
776        myget "Training/tutorial.tar"; tar xf tutorial.tar; cd TUTORIAL
777        ./init.sh
778    elif [[ $bench = 1 ]]; then
779      rm -rf "BENCH${grid_resolution}"
780      local bench=bench_lmdz_${grid_resolution}
781      if [[ $compphysiq = "lmdiso" ]]; then bench=bench_lmdz_iso_${grid_resolution}; fi
782
783      if [[ $is_1D = "y" ]] ; then  # 1D
784        myget "1D/1D.tar.gz"
785        mkdir -p "BENCH${grid_resolution}"
786        tar xf "1D.tar.gz" -C "BENCH${grid_resolution}" --strip-components=1
787        cd "BENCH${grid_resolution}"
788        # Below: ugly, but until we rewrite the 1D case...
789        sed -i'' -e "s:^listecas=.*$:listecas=ARMCU/REF:" -e "s:cd \$local/bin ; ./compile -L \$L:#cd \$local/bin ; ./compile -L \$L:" \
790            -e "s:./compile -L \$llm:#./compile -L \$llm:" -e "s:ln -sf \$bin/\\\\\${main}\${suffixe}.e .:ln -sf ../../../../../$exe_name \\\\\${main}\${suffixe}.e:" -e "s:gzip listing:cp listing restartphy.nc ../../../../; exit 0:" \
791            run.sh
792        cp "../$exe_name" bin/
793        bench_cmd="./run.sh -rad $rad"  # suppress ferret commands that launch after bench is "over"
794      else
795        myget "3DBenchs/$bench.tar.gz"
796        mkdir "BENCH${grid_resolution}"
797        tar xf "$bench.tar.gz" -C "BENCH${grid_resolution}" --strip-components=1
798
799        if [[ $cosp = "v1" || $cosp = "v2" ]]; then
800            cd "BENCH${grid_resolution}"
801            # copier les fichiers namelist input et output our COSP
802            cp ../DefLists/cosp*_input_nl.txt .
803            cp ../DefLists/cosp*_output_nl.txt .
804            # Activer la cles ok_cosp pour tourner avec COSP
805            sed -e 's@ok_cosp=n@ok_cosp=y@' config.def > tmp
806            \mv -f tmp config.def
807            cd ..
808        fi
809
810        if [[ -n "$benchphysiq" ]]; then
811            cd "BENCH${grid_resolution}"
812            if [[ -f "physiq.def_${benchphysiq}" ]]; then
813                cp "physiq.def_${benchphysiq}" benchphysiq.def
814                echo "using physiq.def_${benchphysiq}"
815            else
816                echo "using standard physiq.def"
817            fi
818            cd ..
819        else
820            echo "using standard physiq.def"
821        fi
822
823        if [[ $with_xios = 1 ]]; then
824            cd "BENCH${grid_resolution}"
825            cp ../DefLists/iodef.xml .
826            cp ../DefLists/context_lmdz.xml .
827            cp ../DefLists/field_def_lmdz.xml .
828            # A raffiner par la suite
829            echo "A FAIRE : Copier les *xml en fonction de l option cosp"
830            cp ../DefLists/field_def_cosp*.xml .
831            cp ../DefLists/file_def_hist*xml .
832            # adapt iodef.xml to use attached mode
833            sed -e 's@"using_server" type="bool">true@"using_server" type="bool">false@' \
834                iodef.xml > tmp
835            \mv -f tmp iodef.xml
836
837            # and convert all the enabled="_AUTO_" (for libIGCM) to enabled=.FALSE.
838            # except for histday
839            for histfile in file_def_hist*xml; do
840                if [[ "$histfile" = "file_def_histday_lmdz.xml" ]]; then
841                    sed -e 's@enabled="_AUTO_"@type="one_file" enabled=".TRUE."@' \
842                        "$histfile" > tmp
843                    \mv -f tmp "$histfile"
844                    sed -e 's@output_level="_AUTO_"@output_level="5"@' "$histfile" \
845                        > tmp
846                    \mv -f tmp "$histfile"
847                    sed -e 's@compression_level="2"@compression_level="0"@' \
848                        "$histfile" > tmp
849                    \mv -f tmp "$histfile"
850                else
851                    sed -e 's@enabled="_AUTO_"@type="one_file" enabled=".FALSE."@' \
852                        "$histfile" > tmp
853                    \mv -f tmp "$histfile"
854                fi
855            done
856            # and add option "ok_all_xml=y" in config.def
857            echo "### XIOS outputs" >> config.def
858            echo 'ok_all_xml=.true.' >> config.def
859
860            #activer les sorties pour Cosp
861            if [[ "$cosp" = "v1" ]]; then
862                sed -i'' -e 's@enabled=".FALSE."@enabled=".TRUE."@' \
863                         -e 's@output_level="_AUTO_"@output_level="5"@' \
864                         -e 's@compression_level="2"@compression_level="0"@' \
865                         file_def_histdayCOSP_lmdz.xml
866            fi
867            if [[ "$cosp" = "v2" ]]; then
868                sed -i'' -e 's@compression_level="2"@compression_level="0"@' file_def_histdayCOSPv2_lmdz.xml
869                for type_ in hf day mth; do
870                    file=file_def_hist${type_}COSP
871                    sed -i'' -e 's@src="./'${file}'_lmdz.xml"@src="./'${file}'v2_lmdz.xml"@' context_lmdz.xml
872                done
873                sed -i'' -e 's@field_def_cosp1.xml@field_def_cospv2.xml@' field_def_lmdz.xml
874            fi
875
876            cd ..
877        fi
878
879        # Cas Bench avec ecrad
880        if [[ $rad = "ecrad" ]]; then
881            cd "BENCH${grid_resolution}"
882            cp  ../DefLists/namelist_ecrad .
883            cp -r ../libf/phylmd/ecrad/data .
884            cd ..
885        fi
886
887        # Adjusting bench physiq.def to radiative code chosen
888        cd "BENCH${grid_resolution}"
889        sed -e 's/iflag_rrtm=.*.$/iflag_rrtm='$iflag_rrtm'/' \
890            -e 's/NSW=.*.$/NSW='$NSW'/' physiq.def > tmpdef
891        \mv tmpdef physiq.def
892        cd ..
893
894        cp "$exe_name" "BENCH${grid_resolution}/gcm.e"
895        cd "BENCH${grid_resolution}"
896
897        if [[ ${parallel:0:3} = "mpi" ]]; then
898            # Lancement avec deux procs mpi et 2 openMP
899            echo "export OMP_STACKSIZE=800M" > bench.sh
900            if [[ "${parallel:4:3}" = "omp" ]]; then
901                echo "export OMP_NUM_THREADS=2" >> bench.sh
902            fi
903            if [[ $cosp = "v1" || $cosp = "v2" ]]; then
904                echo "ulimit -s 200000" >> bench.sh
905            else
906                echo "ulimit -s unlimited" >> bench.sh
907            fi
908            if which mpirun &> /dev/null; then
909                echo "mpirun -np 2 gcm.e &> listing" >> bench.sh
910            elif grep -q "Adastra" /etc/motd; then
911                local account
912                account=$(/usr/sbin/my_project.py -l 2>&1 | head -1 | cut -d " " -f 3- | cut -c 5-)
913                bench_cmd="srun --nodes=1 --ntasks=1 --cpus-per-task=2 --threads-per-core=2 --time=0:10:00 --constraint=GENOA --account=$account bash bench.sh"
914                echo "./gcm.e &> listing" >> bench.sh
915            else
916                echo "Error: No command found to run parallel bench"; exit 1
917            fi
918            if [[ $(hostname | cut -c -6) = "spirit" ]]; then  # ulimit unlimited segfaults on Spirit
919                sed -i'' "s/ulimit -s unlimited/ulimit -Ss 8000/" bench.sh
920            fi
921            # Add rebuild, using reb.sh if it is there
922            cat <<EOF >> bench.sh
923if [[ -f reb.sh ]]; then
924  ./reb.sh histday; ./reb.sh histmth; ./reb.sh histhf;
925  ./reb.sh histins; ./reb.sh stomate_history;
926  ./reb.sh sechiba_history; ./reb.sh sechiba_out_2
927fi
928EOF
929        else
930            echo "./gcm.e &> listing" > bench.sh
931        fi
932        chmod +x bench.sh
933        # Getting orchidee stuff
934        if [[ $veget = 'CMIP6' || $veget = "orch2.0" ]]; then  # TODO once we have a 2.2 bench, add it here (or in planned separate bench script)
935            echo 'myget 3DBenchs/BENCHCMIP6.tar.gz'
936            myget 3DBenchs/BENCHCMIP6.tar.gz
937            tar xvzf BENCHCMIP6.tar.gz
938            sed -e "s:VEGET=n:VEGET=y:" config.def > tmp
939            mv -f tmp config.def
940            if [[ $with_xios = 1 ]]; then
941                cp ../../ORCHIDEE/src_xml/context_orchidee.xml .
942                echo '<context id="orchidee" src="./context_orchidee.xml"/>' > add.tmp
943                cp ../../ORCHIDEE/src_xml/field_def_orchidee.xml .
944                cp ../../ORCHIDEE/src_xml/file_def_orchidee.xml .
945                cp ../../ORCHIDEE/src_xml/file_def_input_orchidee.xml .
946                if [[ -f ../../ORCHIDEE/src_xml/context_input_orchidee.xml ]]; then
947                       cp ../../ORCHIDEE/src_xml/context_input_orchidee.xml .
948                       echo '<context id="orchidee" src="./context_input_orchidee.xml"/>' >> add.tmp
949                fi
950                sed -e '/id="LMDZ"/r add.tmp' iodef.xml > tmp
951                mv tmp iodef.xml
952                sed -e'{/sechiba1/ s/enabled="_AUTO_"/type="one_file" enabled=".TRUE."/}' \
953                    file_def_orchidee.xml > tmp
954                \mv -f tmp file_def_orchidee.xml
955                sed -e 's@enabled="_AUTO_"@type="one_file" enabled=".FALSE."@' \
956                    file_def_orchidee.xml > tmp
957                \mv -f tmp file_def_orchidee.xml
958                sed -e 's@output_level="_AUTO_"@output_level="1"@' \
959                    file_def_orchidee.xml > tmp
960                \mv -f tmp file_def_orchidee.xml
961                sed -e 's@output_freq="_AUTO_"@output_freq="1d"@' \
962                    file_def_orchidee.xml > tmp
963                \mv -f tmp file_def_orchidee.xml
964                sed -e 's@compression_level="4"@compression_level="0"@' \
965                    file_def_orchidee.xml > tmp
966                \mv -f tmp file_def_orchidee.xml
967                sed -e 's@XIOS_ORCHIDEE_OK = n@XIOS_ORCHIDEE_OK = y@' \
968                    orchidee.def > tmp
969                \mv -f tmp orchidee.def
970            fi
971        fi
972
973        fi
974
975        if [[ -f ../arch.env ]]; then source ../arch.env; fi
976
977        echo "STARTING BENCH"
978        date
979        if (! $bench_cmd &> out.bench) || ! (tail -n 1 listing | grep "Everything is cool"); then
980            tail listing
981            echo "Bench FAILED, exiting"; exit 1
982        fi
983        date
984        tail listing
985    fi
986
987    # 1D case
988    if [[ $SCM = 1 ]]; then
989        cd "$MODEL"
990        myget 1D/1D.tar.gz
991        tar xf 1D.tar.gz
992        cd 1D
993        for e in "fcm" "env" "path"; do
994          cp "$MODEL/modipsl/modeles/LMDZ/arch/arch-$arch.$e" "$MODEL/modipsl/modeles/LMDZ/arch/arch-local.$e"
995        done
996        if [[ $rad = "oldrad" ]]; then
997            sed -i'' -e 's/^rad=.*$/rad=oldrad/' run.sh
998            sed -i'' -e 's/^rad=.*$/rad=oldrad/' bin/compile
999        elif [[ $rad = ecrad ]] ; then
1000                        sed -i'' -e 's/^rad=.*$/rad=ecrad/' run.sh
1001                        sed -i'' -e 's/^rad=.*$/rad=ecrad/' bin/compile
1002                    fi
1003        echo "Running 1D/run.sh, log in $(pwd)/run1d.log"
1004        ./run.sh &> "$(pwd)/run1d.log"
1005    fi
1006}
1007
1008function run_bench_icosa {
1009    local bench_cmd="./bench.sh"
1010
1011    if [[ $icolmdz = 1 ]]; then
1012      cd "$MODEL/modipsl/modeles/ICOSA_LMDZ"
1013      if [[ $bench = 1 ]]; then
1014        namebench="bench_icolmdz_nbp10_79"
1015        rm -rf $namebench
1016        myget "3DBenchs/$namebench.tar.gz"
1017        mkdir -p $namebench
1018        tar xf "$namebench.tar.gz" -C "$namebench" --strip-components=1
1019        cd $namebench
1020        # copy executables
1021        if [[ ! -x ../bin/icosa_lmdz.exe ]]; then
1022          echo "STOP in icosa_lmdz bench, icosa_lmdz.exe executable not present"; exit 1
1023        fi
1024        cp ../bin/icosa_lmdz.exe .
1025         if [[ ! -x ../../XIOS/bin/xios_server.exe ]]; then
1026          echo "STOP in icosa_lmdz bench, XIOS executable not present"; exit 1
1027        fi
1028        cp ../../XIOS/bin/xios_server.exe .
1029        echo "STARTING ICOSA_LMDZ BENCH"
1030        date
1031        if (! $bench_cmd &> out.bench) || ! ( grep "Time elapsed" listing); then
1032            tail listing
1033            echo "ICOSA_LMDZ bench FAILED, exiting"; exit 1
1034        fi
1035        date
1036        echo "ICOSA_LMDZ bench finished"
1037      fi
1038    fi
1039
1040}
1041# If sourced: returns, else run setup
1042if [[ ! "${BASH_SOURCE[0]}" = "$0" ]]; then return 0; fi
1043
1044echo "install_lmdz.sh DEBUT $(date)"
1045
1046set_default_params
1047read_cmdline_args "$@"
1048ensure_correct_option_combinations
1049download_modipsl_tar
1050init_arch
1051check_available_software
1052get_lmdz_version
1053get_dynamico_icosa_version
1054get_orchidee_version
1055install_netcdf
1056install_IOIPSL
1057install_XIOS
1058compile_orchidee
1059compile_lmdz
1060compile_icolmdzor
1061run_bench
1062run_bench_icosa
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