1 | #!/bin/bash |
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2 | |
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3 | ########################################################################### |
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4 | # Author : Frédéric Hourdin/LMD/hourdin@lmd.jussieu.fr |
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5 | # Usage : install.sh |
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6 | # |
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7 | # bash installation script of the LMDZ model on a Linux PC. |
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8 | # the model is downloaded in the following direcory tree |
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9 | # $MODEL/modipsl/modeles/... |
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10 | # using the "modipsl" infrastructure created by the "IPSL" |
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11 | # for coupled (atmosphere/ocean/vegetation/chemistry) climate modeling |
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12 | # activities. |
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13 | # Here we only download atmospheric (LMDZ) and vegetation (ORCHIDEE) |
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14 | # components. |
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15 | # |
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16 | # The sources of the models can be found in the "modeles" directory. |
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17 | # In the present case, LMDZ5, ORCHIDEE and IOIPSL (handling of input-outputs |
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18 | # using the NetCDF library. |
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19 | # |
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20 | # The script downloads various source files (including a version of NetCDF) |
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21 | # and utilities, compiles the model, and runs a test simulation in a |
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22 | # munimal configuration. |
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23 | # |
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24 | # Prerequisites : g95/pgf90/gfortran, ksh, wget , gunzip, tar, ... |
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25 | # |
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26 | # Modif 18/11/2011 |
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27 | # changes for option real 8. |
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28 | # We comopile with -r8 (or equivalent) and -DNC_DOUBLE for the GCM |
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29 | # but with -r4 for netcdf. Variable real must be set to |
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30 | # r4 or r8 at the beginning of the script below. |
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31 | # |
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32 | ########################################################################### |
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33 | |
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34 | echo install.sh DEBUT `date` |
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35 | |
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36 | set -e |
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37 | |
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38 | echo '################################################################' |
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39 | echo Choice of installation options |
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40 | echo '################################################################' |
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41 | |
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42 | |
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43 | #real=r4 |
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44 | real=r8 |
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45 | |
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46 | # WARNING !!!! For versions before october 2009, use |
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47 | # install.v2.sh instead of install.sh |
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48 | |
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49 | version=20130716.trunk |
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50 | version=testing |
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51 | compilo=gfortran # compilo=pgf90 or g95 or gfortran or ifort sur PC linux |
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52 | |
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53 | #Chemin pour placer le modele |
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54 | MODEL=./LMDZ$version |
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55 | |
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56 | |
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57 | getlmdzor=1 |
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58 | netcdf=1 # 1 for automatic installation |
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59 | # 0 for no installation |
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60 | # /.../../netcdf-4.0.1 if wanting to link with an already |
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61 | # compiled netcdf library (implies to check option compatibility) |
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62 | check_linux=1 |
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63 | ioipsl=1 |
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64 | veget=1 |
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65 | bench=1 |
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66 | pclinux=1 |
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67 | |
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68 | # choose the resolution for the bench runs |
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69 | # grid_resolution= 32x24x11 or 48x36x19 for tests (test without ORCHIDEE) |
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70 | # 96x71x19 standard configuration |
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71 | grid_resolution=48x36x19 |
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72 | |
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73 | ## compile_with_fcm=1 : use makelmdz_fcm, possible a of version 20111103.trunk (LMDZ5/trunk rev 1578) |
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74 | ## compile_with_fcm=0 : use makelmdz |
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75 | compile_with_fcm=0 |
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76 | arch=local |
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77 | |
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78 | sequential=1 |
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79 | |
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80 | |
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81 | ##################################################################### |
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82 | # Test for old gfortran compilers |
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83 | # If the compiler is too old (older than 4.3.x) we test if the |
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84 | # temporary gfortran44 patch is available on the computer in which |
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85 | # case the compiler is changed from gfortran to gfortran44 |
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86 | # Must be aware than parallelism can not be activated in this case |
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87 | ##################################################################### |
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88 | |
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89 | if [ $compilo = gfortran ] ; then |
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90 | gfortran=gfortran |
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91 | gfortranv=`gfortran --version | \ |
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92 | head -1 | awk ' { print $NF } ' | awk -F. ' { print $1 * 10 + $2 } '` |
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93 | if [ $gfortranv -le 43 ] ; then |
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94 | echo ERROR : Your gfortran compiler is too old |
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95 | echo 'Please choose a new one (g95, ifort) and change the line' |
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96 | echo compilo=xxx |
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97 | echo in the install.sh script and rerun it |
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98 | if [ `which gfortran44 | wc -w` -ne 0 ] ; then |
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99 | gfortran=gfortran44 |
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100 | else |
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101 | echo gfotran trop vieux ; exit |
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102 | fi |
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103 | fi |
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104 | compilo=$gfortran |
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105 | fi |
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106 | ##################################################################### |
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107 | |
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108 | |
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109 | |
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110 | OPTPREC="" |
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111 | echo '################################################################' |
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112 | echo Choix des options de compilation |
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113 | echo '################################################################' |
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114 | |
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115 | OPTIMNC=$OPTIM |
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116 | export FC=$compilo |
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117 | export F90=$compilo |
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118 | export F77=$compilo |
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119 | export CPPFLAGS= |
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120 | BASE_LD= |
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121 | if [ $compilo = g95 ] ; then |
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122 | # Set the appropriate compilation options |
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123 | OPTIM='-i4 -O3' |
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124 | OPTDEB="-g -O0 -Wall -ftrace=full -fbounds-check -freal=nan" |
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125 | OPTDEV="-g -O1 -Wall" |
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126 | fmod='fmod=' |
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127 | BASE_LD="" |
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128 | if [ $real = r8 ] ; then OPTPREC="-r8 -DNC_DOUBLE" ; fi |
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129 | export F90FLAGS=" -cpp -ffree-form $OPTIMNC" |
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130 | export FFLAGS=" -cpp $OPTIMNC" |
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131 | export CPPFLAGS=-Df2cFortran |
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132 | export CC=gcc |
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133 | export CXX=g++ |
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134 | elif [ $compilo = $gfortran ] ; then |
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135 | OPTIM='-O3' |
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136 | OPTDEB="-g3 -Wall -fbounds-check -ffpe-trap=invalid,zero,overflow -O0 -fstack-protector-all" |
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137 | OPTDEV="-Wall -fbounds-check" |
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138 | fmod='I ' |
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139 | # OPTPREC="-ffree-line-length-0" |
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140 | # if [ $real = r8 ] ; then OPTPREC="$OPTPREC -fdefault-real-8 -DNC_DOUBLE" ; fi |
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141 | if [ $real = r8 ] ; then OPTPREC=" -fdefault-real-8 -DNC_DOUBLE" ; fi |
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142 | export F90FLAGS=" -ffree-form $OPTIMNC" |
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143 | export FFLAGS=" $OPTIMNC" |
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144 | export CC=gcc |
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145 | export CXX=g++ |
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146 | elif [ $compilo = mpif90 ] ; then |
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147 | OPTIM='-O3' |
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148 | OPTDEB="-g3 -Wall -fbounds-check -ffpe-trap=invalid,zero,overflow -O0 -fstack-protector-all" |
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149 | OPTDEV="-Wall -fbounds-check" |
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150 | BASE_LD="-lblas" |
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151 | fmod='I ' |
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152 | if [ $real = r8 ] ; then OPTPREC="-fdefault-real-8 -DNC_DOUBLE -fcray-pointer" ; fi |
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153 | export F90FLAGS=" -ffree-form $OPTIMNC" |
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154 | export FFLAGS=" $OPTIMNC" |
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155 | export CC=gcc |
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156 | export CXX=g++ |
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157 | elif [ $compilo = pgf90 ] ; then |
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158 | OPTIM='-O2 -Munroll -Mnoframe -Mautoinline -Mcache_align' |
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159 | fmod='module ' |
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160 | if [ $real = r8 ] ; then OPTPREC="-r8 -DNC_DOUBLE" ; fi |
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161 | export CPPFLAGS="-DNDEBUG -DpgiFortran" |
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162 | export CC=pgcc |
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163 | export CFLAGS="-Msignextend" |
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164 | export CXX=pgCC |
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165 | export CXXFLAGS="-Msignextend" |
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166 | export FFLAGS="$OPTIMNC" |
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167 | export F90FLAGS="$OPTIMNC" |
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168 | compile_with_fcm=1 |
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169 | elif [ $compilo = ifort ] ; then |
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170 | OPTIM="-O2 -fp-model strict -ip -align all " |
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171 | OPTDEV="-p -g -O2 -traceback -fp-stack-check -ftrapuv -check" |
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172 | OPTDEB="-g -no-ftz -traceback -ftrapuv -fp-stack-check -check" |
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173 | fmod='module ' |
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174 | if [ $real = r8 ] ; then OPTPREC="-real-size 64 -DNC_DOUBLE" ; fi |
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175 | export CPP="icc -E" |
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176 | export FFLAGS="-O2 -ip -fpic -mcmodel=large" |
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177 | export FCFLAGS="-O2 -ip -fpic -mcmodel=large" |
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178 | export CC=icc |
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179 | export CFLAGS="-O2 -ip -fpic -mcmodel=large" |
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180 | export CXX=icpc |
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181 | export CXXFLAGS="-O2 -ip -fpic -mcmodel=large" |
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182 | compile_with_fcm=1 |
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183 | else |
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184 | echo unexpected compiler $compilo ; exit |
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185 | fi |
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186 | |
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187 | OPTIMGCM="$OPTIM $OPTPREC" |
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188 | |
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189 | hostname=`hostname` |
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190 | |
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191 | ########################################################################## |
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192 | # If installing on know machines such as IBM x3750 (Ada) |
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193 | # at IDRIS, don't check for available software and don"t install netcdf |
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194 | if [ ${hostname:0:5} = ada33 ] ; then |
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195 | netcdf=0 # no need to recompile netcdf, alreday available |
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196 | check_linux=0 |
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197 | pclinux=0 |
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198 | ioipsl=0 # no need to recompile ioipsl, already available |
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199 | #netcdf="/smplocal/pub/NetCDF/4.1.3" |
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200 | compilo="ifort" |
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201 | fmod='module ' |
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202 | if [ $real = r8 ] ; then OPTPREC="-real-size 64 -DNC_DOUBLE" ; fi |
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203 | OPTIM="-O2 -fp-model strict -ip -axAVX,SSE4.2 -align all " |
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204 | OPTIMGCM="$OPTIM $OPTPREC" |
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205 | fi |
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206 | ########################################################################## |
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207 | |
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208 | |
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209 | mkdir -p $MODEL |
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210 | echo $MODEL |
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211 | MODEL=`( cd $MODEL ; pwd )` # to get absolute path, if necessary |
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212 | |
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213 | |
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214 | |
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215 | # Option -fendian=big is only to be used with ARPEGE1D. |
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216 | # The -r8 should probably be avoided if running on 32 bit machines |
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217 | # Option r8 is not mandatory and generates larger executables. |
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218 | # It is however mandatory if using ARPEGE1D |
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219 | # Better optimization options might be a better choice (e.g. -O3) |
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220 | |
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221 | |
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222 | echo '################################################################' |
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223 | if [ "$check_linux" = 1 ] ; then |
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224 | echo Check if required software is available |
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225 | echo '################################################################' |
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226 | |
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227 | #### Ehouarn: test if ksh and/or bash are available |
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228 | use_shell="ksh" # default: use ksh |
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229 | if [ "`which ksh`" = "" ] ; then |
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230 | echo "no ksh ... we will use bash" |
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231 | use_shell="bash" |
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232 | if [ "`which bash`" = "" ] ; then |
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233 | echo "ksh (or bash) needed!! Install it!" |
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234 | fi |
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235 | fi |
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236 | |
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237 | |
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238 | for logiciel in csh wget tar gzip make $compilo gcc ; do |
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239 | if [ "`which $logiciel`" = "" ] ; then |
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240 | echo You must first install $logiciel on your system |
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241 | exit |
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242 | fi |
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243 | done |
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244 | |
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245 | if [ $pclinux = 1 ] ; then |
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246 | cd $MODEL |
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247 | cat <<eod > tt.f90 |
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248 | print*,'coucou' |
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249 | end |
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250 | eod |
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251 | $compilo tt.f90 -o a.out |
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252 | ./a.out >| tt |
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253 | if [ "`cat tt | sed -e 's/ //g' `" != "coucou" ] ; then |
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254 | echo problem installing with compiler $compilo ; exit ; fi |
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255 | \rm tt a.out tt.f90 |
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256 | fi |
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257 | fi |
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258 | |
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259 | ########################################################################### |
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260 | if [ $getlmdzor = 1 ] ; then |
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261 | echo '##########################################################' |
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262 | echo Download a slightly modified version of LMDZ |
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263 | echo '##########################################################' |
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264 | cd $MODEL |
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265 | wget http://www.lmd.jussieu.fr/~lmdz/DistribG95/modipsl.$version.tar.gz |
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266 | echo install.sh wget_OK `date` |
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267 | gunzip modipsl.$version.tar.gz |
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268 | tar xvf modipsl.$version.tar |
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269 | \rm modipsl.$version.tar |
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270 | |
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271 | # We download LMDZ and make some modifications to make it |
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272 | #compatible with $compilo |
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273 | # and we use an old stable but robust and well tested version of ORCHIDEE |
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274 | # That version of ORCHIDEE can be obtained using |
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275 | # wget http://www.lmd.jussieu.fr/~lmdz/DistribG95/getlmdzor.x |
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276 | fi |
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277 | |
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278 | echo OK1 |
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279 | |
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280 | if [ $netcdf = 1 ] ; then |
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281 | echo '##########################################################' |
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282 | echo Compiling the Netcdf library |
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283 | echo '##########################################################' |
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284 | cd $MODEL |
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285 | wget http://www.lmd.jussieu.fr/~lmdz/DistribG95/netcdf-4.0.1.tar.gz |
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286 | gunzip netcdf-4.0.1.tar.gz |
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287 | tar xvf netcdf-4.0.1.tar |
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288 | \rm -f netcdf-4.0.1.tar |
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289 | |
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290 | cd netcdf-4.0.1 |
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291 | |
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292 | sed -e 's/gfortran/'$gfortran'/g' configure >| tmp ; mv -f tmp configure ; chmod +x configure |
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293 | localdir=`pwd -P` |
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294 | ./configure --prefix=$localdir |
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295 | sed -e 's/gfortran/'$gfortran'/g' Makefile >| tmp ; mv -f tmp Makefile |
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296 | make check |
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297 | make install |
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298 | echo install.sh netcdf_OK `date` |
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299 | fi # of if [ $netcdf = 1 ] |
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300 | |
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301 | |
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302 | #======================================================================================= |
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303 | echo OK2 ioipsl=$ioipsl |
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304 | echo '##########################################################' |
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305 | echo 'Installing MODIPSL, the installation package manager for the ' |
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306 | echo 'IPSL models and tools' |
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307 | echo '##########################################################' |
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308 | |
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309 | if [ $netcdf = 0 -o $netcdf = 1 ] ; then |
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310 | ncdfdir=$MODEL/netcdf-4.0.1 |
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311 | else |
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312 | ncdfdir=$netcdf |
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313 | fi |
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314 | |
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315 | if [ $ioipsl = 1 ] ; then |
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316 | cd $MODEL/modipsl |
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317 | \rm -rf lib/* |
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318 | |
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319 | cd util |
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320 | |
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321 | cp AA_make.gdef AA_make.orig |
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322 | F_C="$compilo -c " ; if [ "$compilo" = "$gfortran" -o "$compilo" = "mpif90" ] ; then F_C="$compilo -c -cpp " ; fi |
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323 | sed -e 's/^\#.*.g95.*.\#.*.$/\#/' AA_make.gdef > tmp |
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324 | sed -e "s:F_L = g95:F_L = $compilo:" -e "s:F_C = g95 -c:F_C = $F_C": \ |
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325 | -e 's/g95.*.w_w.*.(F_D)/g95 w_w = '"$OPTIMGCM"'/' \ |
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326 | -e 's:g95.*.NCDF_INC.*.$:g95 NCDF_INC= '"$ncdfdir"'/include:' \ |
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327 | -e 's:g95.*.NCDF_LIB.*.$:g95 NCDF_LIB= -L'"$ncdfdir"'/lib -lnetcdf:' \ |
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328 | -e "s:-fmod=:-$fmod:" -e 's/-fno-second-underscore//' \ |
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329 | -e 's:#-Q- g95 M_K = gmake:#-Q- g95 M_K = make:' \ |
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330 | tmp >| AA_make.gdef |
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331 | |
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332 | |
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333 | if [ "$use_shell" = "ksh" ] ; then |
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334 | if [ "$pclinux" = 1 ] ; then |
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335 | ./ins_make -t g95 # We use lines for g95 even for the other compilers |
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336 | fi |
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337 | else # bash |
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338 | sed -e s:/bin/ksh:/bin/bash:g ins_make > ins_make.bash |
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339 | chmod u=rwx ins_make.bash |
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340 | if [ "$pclinux" = 1 ] ; then |
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341 | ./ins_make.bash -t g95 # We use lines for g95 even for the other compilers |
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342 | else |
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343 | ./ins_make.bash |
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344 | fi |
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345 | fi # of if [ "$use_shell" = "ksh" ] |
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346 | |
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347 | #======================================================================================= |
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348 | echo '##########################################################' |
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349 | echo 'Compiling IOIPSL, the interface library with Netcdf' |
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350 | echo '##########################################################' |
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351 | |
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352 | cd $MODEL/modipsl/modeles/IOIPSL/src |
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353 | if [ "$use_shell" = "bash" ] ; then |
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354 | cp Makefile Makefile.ksh |
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355 | sed -e s:/bin/ksh:/bin/bash:g Makefile.ksh > Makefile |
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356 | fi |
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357 | if [ "$pclinux" = 1 ] ; then |
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358 | # Build IOIPSL modules and library |
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359 | if [ $compilo = g95 ] ; then |
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360 | cp restcom.f90 restcom.f90.orig |
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361 | sed -e 's:cmode=or(NF90_NOCLOBBER,NF90_64BIT_OFFSET):cmode=NF90_NOCLOBBER:' restcom.f90.orig > restcom.f90 |
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362 | fi |
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363 | make clean |
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364 | make |
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365 | if [ "$compilo" = "$gfortran" -o "$compilo" = "mpif90" ] ; then # copy module files to lib |
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366 | cp -f *.mod ../../../lib |
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367 | fi |
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368 | # Build IOIPSL tools (ie: "rebuild", if present) |
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369 | if [ -f $MODEL/modipsl/modeles/IOIPSL/tools/rebuild ] ; then |
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370 | cd $MODEL/modipsl/modeles/IOIPSL/tools |
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371 | # adapt Makefile & rebuild script if in bash |
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372 | if [ "$use_shell" = "bash" ] ; then |
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373 | cp Makefile Makefile.ksh |
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374 | sed -e s:/bin/ksh:/bin/bash:g Makefile.ksh > Makefile |
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375 | cp rebuild rebuild.ksh |
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376 | sed -e 's:/bin/ksh:/bin/bash:g' \ |
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377 | -e 's:print -u2:echo:g' \ |
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378 | -e 's:print:echo:g' rebuild.ksh > rebuild |
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379 | fi |
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380 | make clean |
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381 | make |
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382 | fi |
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383 | fi # of if [ "$pclinux" = 1 ] |
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384 | |
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385 | else # of if [ $ioipsl = 1 ] |
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386 | if [ ${hostname:0:5} = ada33 ] ; then |
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387 | cd $MODEL/modipsl |
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388 | cd util |
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389 | |
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390 | cp AA_make.gdef AA_make.orig |
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391 | sed -e 's/^\#.*.g95.*.\#.*.$/\#/' AA_make.gdef > tmp |
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392 | sed -e "s:F_L = g95:F_L = $compilo:" -e "s:F_C = g95 -c:F_C = $compilo -c": \ |
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393 | -e 's/g95.*.w_w.*.(F_D)/g95 w_w = '"$OPTIMGCM"'/' \ |
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394 | -e 's:g95.*.NCDF_INC.*.$:g95 NCDF_INC= -I/smplocal/pub/HDF5/1.8.9/seq/include -I/smplocal/pub/NetCDF/4.1.3/include:' \ |
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395 | -e 's:g95.*.NCDF_LIB.*.$:g95 NCDF_LIB= -L/smplocal/pub/NetCDF/4.1.3/lib -lnetcdff -lnetcdf:' \ |
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396 | -e "s:-fmod=:-$fmod:" -e 's/-fno-second-underscore//' \ |
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397 | -e 's:#-Q- g95 M_K = gmake:#-Q- g95 M_K = make:' \ |
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398 | tmp >| AA_make.gdef |
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399 | |
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400 | ./ins_make -t g95 # We use lines for g95 even for the other compilers |
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401 | |
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402 | # on Ada, IOIPSL is already installed in ~rpsl035/IOIPSL_PLUS |
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403 | # so link it to current settings |
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404 | cd $MODEL/modipsl/modeles/ |
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405 | \rm -r -f IOIPSL |
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406 | ln -s ~rpsl035/IOIPSL_PLUS IOIPSL |
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407 | cd .. |
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408 | ln -s ~rpsl035/IOIPSL_PLUS/modipsl/bin/* bin/ |
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409 | ln -s ~rpsl035/IOIPSL_PLUS/modipsl/lib/* lib/ |
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410 | |
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411 | fi # of if [ ${hostname:0:5} = ada33 ] |
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412 | echo install.sh ioipsl_OK `date` |
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413 | fi # of if [ $ioipsl = 1 ] |
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414 | |
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415 | |
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416 | #============================================================================ |
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417 | veget_version=false |
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418 | if [ "$veget" = 1 ] ; then |
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419 | echo '########################################################' |
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420 | echo 'Compiling ORCHIDEE, the continental surfaces model ' |
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421 | echo '########################################################' |
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422 | cd $MODEL/modipsl/modeles/ORCHIDEE |
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423 | export ORCHPATH=`pwd` |
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424 | orchidee_rev=`svn info | grep '^Revision' | awk '{print $2}'` |
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425 | if [ -z $orchidee_rev ] ; then |
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426 | svn info 2 >| err |
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427 | grep 'svn upgrade' err > /dev/null |
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428 | if [ $? -eq 0 ] ; then |
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429 | svn upgrade |
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430 | orchidee_rev=`svn info | grep '^Revision' | awk '{print $2}'` |
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431 | else |
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432 | echo "Impossible de determiner la version d'ORCHIDEE" |
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433 | echo "Continuer (o/y/n) ?" |
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434 | read reponse |
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435 | if [ $reponse != 'o' ] && [ $reponse != 'y' ] ; then |
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436 | exit |
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437 | fi |
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438 | fi |
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439 | fi |
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440 | echo '########################################################' |
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441 | echo 'Orchidee revision: ', $orchidee_rev |
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442 | echo '########################################################' |
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443 | echo OKpwd ; pwd |
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444 | if [ $orchidee_rev -ge 2247 ] ; then |
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445 | veget_version=orchidee2.0 |
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446 | cd arch |
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447 | sed -e s:"%COMPILER .*.$":"%COMPILER $compilo":1 \ |
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448 | -e s:"%LINK .*.$":"%LINK $compilo":1 \ |
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449 | -e s:"%PROD_FFLAGS .*.$":"%PROD_FFLAGS $OPTIM":1 \ |
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450 | -e s:"%DEV_FFLAGS .*.$":"%DEV_FFLAGS $OPTDEV":1 \ |
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451 | -e s:"%DEBUG_FFLAGS .*.$":"%DEBUG_FFLAGS $OPTDEB":1 \ |
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452 | -e s:"%BASE_FFLAGS .*.$":"%BASE_FFLAGS $OPTPREC":1 \ |
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453 | arch-gfortran.fcm > arch-local.fcm |
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454 | echo "NETCDF_LIBDIR=\"-L${ncdfdir}/lib -lnetcdf\"" > arch-local.path |
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455 | echo "NETCDF_INCDIR=${ncdfdir}/include" >> arch-local.path |
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456 | echo "IOIPSL_INCDIR=$ORCHPATH/../../lib" >> arch-local.path |
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457 | echo "IOIPSL_LIBDIR=$ORCHPATH/../../lib" >> arch-local.path |
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458 | cd ../ |
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459 | # compiling ORCHIDEE sequential mode |
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460 | ./makeorchidee_fcm -noxios -prod -parallel none -arch local |
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461 | else |
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462 | if [ -d src_parallel ] ; then |
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463 | liste_src="parallel parameters global stomate sechiba driver" |
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464 | veget_version=orchidee2.0 |
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465 | else |
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466 | # Obsolete, for ORCHIDEE_beton only |
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467 | liste_src="parameters stomate sechiba " |
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468 | # A trick to compile ORCHIDEE depending on if we are using real*4 or real*8 |
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469 | cd src_parameters ; \cp reqdprec.$real reqdprec.f90 ; cd .. |
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470 | veget_version=orchidee1.9 |
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471 | fi |
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472 | for d in $liste_src ; do src_d=src_$d |
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473 | echo src_d $src_d |
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474 | echo ls ; ls |
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475 | if [ ! -d $src_d ] ; then echo Problem orchidee : no $src_d ; exit ; fi |
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476 | cd $src_d ; \rm -f *.mod make ; make clean |
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477 | make ; if [ "$compilo" = "$gfortran" -o "$compilo" = "mpif90" ] ; then cp -f *.mod ../../../lib ; fi |
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478 | cd .. |
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479 | done |
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480 | fi |
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481 | echo install.sh orchidee_OK `date` |
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482 | fi # of if [ "$veget" = 1 ] |
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483 | |
---|
484 | |
---|
485 | #============================================================================ |
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486 | # Ehouarn: it may be directory LMDZ4 or LMDZ5 depending on tar file... |
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487 | if [ -d $MODEL/modipsl/modeles/LMDZ[45] ] ; then |
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488 | echo '##########################################################' |
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489 | echo 'Compiling LMDZ' |
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490 | echo '##########################################################' |
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491 | cd $MODEL/modipsl/modeles/LMDZ[45] |
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492 | else |
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493 | echo "ERROR: No LMDZ4 (or LMDZ5) directory !!!" |
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494 | exit |
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495 | fi |
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496 | |
---|
497 | ########################################################### |
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498 | # For those who want to use fcm to compile via : |
---|
499 | # makelmdz_fcm -arch local ..... |
---|
500 | ############################################################ |
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501 | |
---|
502 | if [ "$pclinux" = "1" ] ; then |
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503 | |
---|
504 | # create local 'arch' files (if on Linux PC): |
---|
505 | cd arch |
---|
506 | # arch-local.path file |
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507 | echo "NETCDF_LIBDIR=\"-L${ncdfdir}/lib -lnetcdf\"" > arch-local.path |
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508 | echo OK3 |
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509 | echo "NETCDF_INCDIR=-I${ncdfdir}/include" >> arch-local.path |
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510 | echo 'IOIPSL_INCDIR=$LMDGCM/../../lib' >> arch-local.path |
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511 | echo 'IOIPSL_LIBDIR=$LMDGCM/../../lib' >> arch-local.path |
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512 | echo 'ORCH_INCDIR=$LMDGCM/../../lib' >> arch-local.path |
---|
513 | echo 'ORCH_LIBDIR=$LMDGCM/../../lib' >> arch-local.path |
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514 | # arch-local.fcm file (adapted from arch-linux-32bit.fcm) |
---|
515 | |
---|
516 | if [ $real = r8 ] ; then FPP_DEF=NC_DOUBLE ; else FPP_DEF="" ; fi |
---|
517 | sed -e s:"%COMPILER .*.$":"%COMPILER $compilo":1 \ |
---|
518 | -e s:"%LINK .*.$":"%LINK $compilo":1 \ |
---|
519 | -e s:"%PROD_FFLAGS .*.$":"%PROD_FFLAGS $OPTIM":1 \ |
---|
520 | -e s:"%DEV_FFLAGS .*.$":"%DEV_FFLAGS $OPTDEV":1 \ |
---|
521 | -e s:"%DEBUG_FFLAGS .*.$":"%DEBUG_FFLAGS $OPTDEB":1 \ |
---|
522 | -e s:"%BASE_FFLAGS .*.$":"%BASE_FFLAGS $OPTPREC":1 \ |
---|
523 | arch-linux-32bit.fcm > arch-local.fcm |
---|
524 | |
---|
525 | cd .. |
---|
526 | ### Adapt "bld.cfg" (add the shell): |
---|
527 | whereisthatshell=$(which ${use_shell}) |
---|
528 | echo "bld::tool::SHELL $whereisthatshell" >> bld.cfg |
---|
529 | |
---|
530 | fi # of if [ "$pclinux" = 1 ] |
---|
531 | |
---|
532 | |
---|
533 | cd $MODEL/modipsl/modeles/LMDZ? |
---|
534 | |
---|
535 | ################################################################## |
---|
536 | # Compile LMDZ |
---|
537 | ################################################################## |
---|
538 | echo install.sh avant_compilation `date` |
---|
539 | if [ $compile_with_fcm = 1 ] ; then makelmdz="makelmdz_fcm -arch $arch" ; else makelmdz=makelmdz ; fi |
---|
540 | |
---|
541 | if [ "$sequential" = 1 ] ; then |
---|
542 | ./$makelmdz -d ${grid_resolution} -v $veget_version gcm |
---|
543 | echo install.sh apres_compilation `date` |
---|
544 | |
---|
545 | |
---|
546 | if [ -f gcm.e ] || [ -f bin/gcm_${grid_resolution}_phylmd_seq_orch.e ] || [ -f bin/gcm_${grid_resolution}_phylmd_seq.e ] ; then |
---|
547 | echo '##########################################################' |
---|
548 | echo 'Compilation successfull !! ' |
---|
549 | echo '##########################################################' |
---|
550 | else |
---|
551 | echo 'Compilation failed !!' |
---|
552 | exit |
---|
553 | fi |
---|
554 | |
---|
555 | ################################################################## |
---|
556 | # Below, we run a benchmark test (if bench=0) |
---|
557 | ################################################################## |
---|
558 | if [ $bench = 0 ] ; then |
---|
559 | exit |
---|
560 | fi |
---|
561 | |
---|
562 | echo '##########################################################' |
---|
563 | echo ' Running a test run ' |
---|
564 | echo '##########################################################' |
---|
565 | |
---|
566 | \rm -rf BENCH${grid_resolution} |
---|
567 | bench=bench_lmdz_${grid_resolution} |
---|
568 | echo install.sh avant_chargement_bench `date` |
---|
569 | wget http://www.lmd.jussieu.fr/~lmdz/DistribG95/$bench.tar.gz |
---|
570 | echo install.sh apres_chargement_bench `date` |
---|
571 | gunzip $bench.tar.gz |
---|
572 | tar xvf $bench.tar |
---|
573 | |
---|
574 | if [ -f gcm.e ] ; then |
---|
575 | cp gcm.e BENCH${grid_resolution}/ |
---|
576 | elif [ -f bin/gcm_${grid_resolution}_phylmd_seq_orch.e ] ; then |
---|
577 | cp bin/gcm_${grid_resolution}_phylmd_seq_orch.e BENCH${grid_resolution}/gcm.e |
---|
578 | elif [ -f bin/gcm_${grid_resolution}_phylmd_seq.e ] ; then |
---|
579 | cp bin/gcm_${grid_resolution}_phylmd_seq.e BENCH${grid_resolution}/gcm.e |
---|
580 | else |
---|
581 | echo "No gcm.e found" |
---|
582 | exit |
---|
583 | fi |
---|
584 | |
---|
585 | |
---|
586 | cd BENCH${grid_resolution} |
---|
587 | ./bench.sh > bench.out 2>&1 |
---|
588 | |
---|
589 | |
---|
590 | echo '##########################################################' |
---|
591 | echo ' Bench results ' |
---|
592 | echo '##########################################################' |
---|
593 | |
---|
594 | cat ./bench.out |
---|
595 | echo install.sh FIN_du_BENCH `date` |
---|
596 | |
---|
597 | echo '##########################################################' |
---|
598 | echo 'Simulation finished in' `pwd` |
---|
599 | echo 'You may re-run it with : cd ' `pwd` ' ; gcm.e' |
---|
600 | echo 'or ./bench.sh' |
---|
601 | echo '##########################################################' |
---|
602 | |
---|
603 | fi # fin sequential |
---|
604 | |
---|
605 | if [ "$gfortran" = "gfortran44" ] ; then |
---|
606 | echo Your gfortran compiler was too old so that the model was automatically |
---|
607 | echo compiled with gfortran44 instead. It can not be used in parallel mode. |
---|
608 | echo You can change the compiler at the begining of the install.sh |
---|
609 | echo script and reinstall. |
---|
610 | fi |
---|