1 | #set -vx |
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2 | |
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3 | local=`pwd -P` |
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4 | cd $local |
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5 | echo REPERTOIRE LOCAL : $local |
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6 | |
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7 | echo '############################################################' |
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8 | echo 0/ gestion des options |
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9 | echo '############################################################' |
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10 | pcmdi_metrics=0 |
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11 | tuning_metrics=1 |
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12 | und=0 |
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13 | zon=1 |
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14 | html=1 |
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15 | atlas=1 |
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16 | newatlas=1 |
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17 | atlas_cesmep=0 |
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18 | get=0 |
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19 | cmor=1 |
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20 | regdyn=0 |
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21 | lma=0 |
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22 | trmm=0 |
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23 | axe2=0 |
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24 | axe4=0 |
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25 | esmval2=0 |
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26 | refld_histo=0 |
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27 | vertcld_calipso=0 |
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28 | stations_day=0 |
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29 | stations_mth=0 |
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30 | qsub=0 |
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31 | mjo=0 |
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32 | river=0 |
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33 | dataref=1 |
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34 | |
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35 | ref=OBS |
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36 | echo $ref |
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37 | # ./job_multi.sh -1D 0 -get 0 -atlas 0 -pcmdi 0 -tuning 0 -lma 0 -trmm 0 |
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38 | runstxt=$local/runs.txt |
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39 | |
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40 | while test -n "${1}"; do |
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41 | case $1 in |
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42 | -1D) und=$2 ; shift ;; |
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43 | -get) get=$2 ; shift ;; |
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44 | -cmor) cmor=$2 ; shift ;; |
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45 | -zon) zon=$2 ; shift ;; |
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46 | -atlas) atlas=$2 ; shift ;; |
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47 | -atlas_cesmep) atlas_cesmep=$2 ; shift ;; |
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48 | -pcmdi) pcmdi_metrics=$2 ; shift ;; |
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49 | -tuning) tuning_metrics=$2 ; shift ;; |
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50 | -runstxt) runstxt=$2 ; shift ;; |
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51 | -lma) lma=$2 ; shift ;; |
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52 | -trmm) trmm=$2 ; shift ;; |
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53 | -axe4) axe4=$2 ; shift ;; |
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54 | -axe2) axe2=$2 ; shift ;; |
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55 | -regdyn) regdyn=$2 ; shift ;; |
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56 | -esmval2) esmval2=$2 ; shift ;; |
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57 | -stations_day) stations_day=$2 ; shift ;; |
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58 | -stations_mth) stations_mth=$2 ; shift ;; |
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59 | -refld_histo) refld_histo=$2 ; shift ;; |
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60 | -vertcld_calipso) vertcld_calipso=$2 ; shift ;; |
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61 | -mjo) mjo=$2 ; shift ;; |
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62 | -river) river=$2 ; shift ;; |
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63 | -dataref) dataref=$2 ; shift ;; |
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64 | *) comp=$1 ;; |
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65 | esac |
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66 | shift |
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67 | done |
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68 | |
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69 | rm -f out.com$$ |
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70 | runstxt=$local/runs.txt |
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71 | echo runstxt= $runstxt |
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72 | |
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73 | echo DODSDIR : $DODSDIR |
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74 | MAIN_SE=$DODSDIR/$login/lmdz/SE |
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75 | TS_DA=$DODSDIR/$login/lmdz/TS_DA |
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76 | TS_MO=$DODSDIR/$login/lmdz/TS_MO |
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77 | MULTIDIR=$DODSDIR/$login/lmdz/MultiSimu |
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78 | |
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79 | if [ ! -d $MULTIDIR ] ; then mkdir -p $MULTIDIR ; fi |
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80 | if [ ! -d $MAIN_SE ] ; then mkdir -p $MAIN_SE ; fi |
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81 | if [ ! -d $MAIN_MO ] ; then mkdir -p $MAIN_MO ; fi |
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82 | if [ ! -d $MAIN_DA ] ; then mkdir -p $MAIN_DA ; fi |
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83 | |
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84 | COMP_D=$MULTIDIR/$comp |
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85 | DEF_FILE=$COMP_D/def.txt ; if [ ! -f $DEF_FILE ] ; then echo renseigner $DEF_FILE ; exit ; fi |
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86 | |
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87 | listsims="" ; for s in `awk ' {print $1} ' $DEF_FILE | uniq` ; do listsims="$listsims $s" ; done |
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88 | echo listsims $listsims |
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89 | |
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90 | echo ### On supprime dans def.txt les lignes vides ######## |
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91 | sed -i "/^[ \t]*$/d" $DEF_FILE |
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92 | |
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93 | echo ### On teste d abord la coherence des noms des simulations dans def.txt et $runstxt ################ |
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94 | echo MULTI-ATLAS "$comp" |
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95 | for s in $listsims ; do |
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96 | srun=`grep -w "^$s " $runstxt | awk ' { print $1 } '` |
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97 | echo 's='"$s" ' srun=' "$srun" |
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98 | if [ "$s" = "$srun" ] ; then |
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99 | echo Meme nom de la simulation dans def.txt et $runstxt 's=' "$s" ' srun=' "$srun" |
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100 | else |
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101 | echo ATTENTION : la simulation "$s" de votre def.txt n est pas repertoriee dans $runstxt |
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102 | echo ou le meme nom est attribue a plusieures simulations |
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103 | echo Il faut la rajouter dans $runstxt |
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104 | echo avec le chemin vers les SE et TS dans ciclad : /modfs/$login/IGCM_OUT |
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105 | echo ou renomer votre simulation |
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106 | exit |
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107 | fi |
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108 | done |
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109 | #exit |
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110 | listruns="" |
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111 | listrunss="" |
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112 | listrunse="" |
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113 | if [ ! -d $MAIN_SE/ORIG ] ; then mkdir -p $MAIN_SE/ORIG ; fi |
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114 | for s in $listsims ; do |
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115 | simdir=`grep -w "^$s " $runstxt | awk ' { print $2 } '` |
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116 | echo $simdir |
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117 | ( cd $MAIN_SE/ORIG ; ln -sf $simdir/ATM/Analyse/SE/*mth*nc . ) > /dev/null 2>&1 |
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118 | echo $simdir |
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119 | ss=`basename $simdir ` |
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120 | listruns="$listruns $ss" |
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121 | for year in `grep -w "^$s" $DEF_FILE | awk ' { print $2 } '` ; do |
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122 | listrunss="$listrunss ${ss}_$year" |
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123 | listrune="$listrune ${ss}_SE_$year" |
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124 | done |
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125 | done |
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126 | echo listruns = $listruns |
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127 | echo listrunss= $listrunss |
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128 | echo listrune= $listrune |
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129 | echo ================================================================ |
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130 | echo la commande suivante |
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131 | echo ls -lrt $MAIN_SE/ORIG |
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132 | echo peut prendre beaucoup de temps lorsque |
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133 | echo l acces aux espaces du CCRT et/ou de l IDRIS thredds est lent ou si |
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134 | echo les espaces /thredds/tgcc et/ou /thredds/idris ne sont pas montes sur ciclad. |
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135 | echo On ne l utilise plus !!! |
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136 | echo ================================================================ |
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137 | ###ls -lrt $MAIN_SE/ORIG |
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138 | |
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139 | ns=0 |
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140 | listsimss="" ; |
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141 | for ss in `awk ' {print $1"_"$2 } ' $DEF_FILE` ; do |
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142 | if [ $dataref = 0 ] ; then |
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143 | if [ ${ns} = 0 ] ; then |
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144 | ref=$ss |
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145 | echo ref=$ref |
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146 | fi |
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147 | fi |
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148 | let "ns = ${ns} + 1" |
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149 | listsimss="$listsimss $ss" ; |
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150 | done |
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151 | echo ref=$ref |
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152 | |
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153 | listsimse="" ; for se in `awk ' {print $1"_SE_"$2 } ' $DEF_FILE` ; do listsimse="$listsimse $se" ; done |
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154 | echo listsims $listsims |
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155 | echo listsimss $listsimss |
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156 | echo listsimse $listsimse |
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157 | |
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158 | echo SIMULATIONS: $listsims |
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159 | |
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160 | RUNS="" |
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161 | RUNS=`awk ' {print $1"_"$2 } ' $DEF_FILE` |
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162 | echo listrunss=$RUNS |
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163 | |
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164 | echo '########################################################################' |
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165 | echo 1/ Rapatriement des simulations manquantes |
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166 | echo '########################################################################' |
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167 | #### AI avril 2020 ################ Avant l acces directe aux simulations sur le dods du CCRT |
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168 | # Adresses web ne sont plus a jours |
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169 | # A commenter les adresses web CCRT |
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170 | # A mettre a jours les adress web IDRIS |
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171 | # Rajouter d'autres machines avec rsynk, wget ou ssh ... |
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172 | |
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173 | if [ $get = 1 ] ; then |
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174 | cd $MAIN_SE |
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175 | for sim in $listsimss ; do echo ./getun.sh ${sim} >> $local/out.com$$ ; ./getun.sh ${sim} ; done |
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176 | cd $TS_DA ; pwd |
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177 | for sim in $listsimss ; do echo ./getun.sh ${sim} >> $local/out.com$$ ; ./getun.sh ${sim} ; done |
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178 | cd $TS_MO ; pwd |
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179 | for sim in $listsimss ; do echo ./getun.sh ${sim} >> $local/out.com$$ ; ./getun.sh ${sim} ; done |
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180 | fi |
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181 | |
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182 | if [ $cmor = 1 ] ; then |
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183 | cp cmor.sh $MAIN_SE/. |
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184 | cp season.sh $MAIN_SE/. |
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185 | cd $MAIN_SE |
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186 | chmod +x cmor.sh |
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187 | chmod +x season.sh |
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188 | ######################################################################### |
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189 | # 1.2 "Cmorisation des fichiers mensuels : traduction au format CMIP |
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190 | ######################################################################### |
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191 | # Deux lignes suivantes modif FH 2016/11/09 |
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192 | # Files are taken from /modfs/ipslfs/dods/fabric/lmdz/SE/ORIG and |
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193 | # results are in /modfs/ipslfs/dods/fabric/lmdz/SE/CMOR |
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194 | ######################################################################### |
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195 | ./cmor.sh -runsfile $runstxt $comp |
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196 | if [ $? != 0 ] ; then exit ; fi # Probleme de histmth non present. On arrete tout |
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197 | |
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198 | ######################################################################### |
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199 | # 1.3 Interpolate fields on a common horizontal grid (VLR) and |
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200 | ######################################################################### |
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201 | # average in time "YEAR", "JJA" ... |
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202 | # Results are put on |
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203 | # /modfs/ipslfs/dods/fabric/lmdz/VLR/YEAR/[SIMU_NAME]_[period]/NC |
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204 | # If wanting to rerun season.sh for observations : |
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205 | # ./season.sh -s OBS |
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206 | ######################################################################### |
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207 | ./season.sh -comp $comp |
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208 | cd $local |
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209 | fi |
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210 | |
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211 | echo '########################################################################' |
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212 | echo 2/ Lancement des atlas manquant |
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213 | echo '########################################################################' |
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214 | natlas=`wc -l $COMP_D/atlas-def | awk ' { print $1 } '` |
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215 | count_atlas=0 |
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216 | |
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217 | if [ $atlas = 1 ] ; then |
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218 | if [ $newatlas = 1 ]; then |
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219 | sed -e 's/COMPAR/'${comp}'/' ${local}/atlas/make_atlas.sh > ${local}/atlas/make_atlas_${comp}.sh |
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220 | $submit -v COMP=${comp},DATAREF=${dataref} ${local}/atlas/make_atlas_${comp}.sh |
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221 | |
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222 | ./make_timecount.sh ${comp} |
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223 | |
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224 | else |
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225 | |
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226 | for sim in $listsimss ; do |
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227 | il=1 |
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228 | if [ ! -f $COMP_D/atlas-def ] ; then |
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229 | echo Definir les atlas a construire dans $COMP_D/atlas-def |
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230 | echo Example : |
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231 | cat $COMP_D/../CMIP5to6/atlas-def |
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232 | fi |
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233 | while [ $il -le $natlas ] ; do |
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234 | line=`sed -n -e ${il}p $COMP_D/atlas-def` |
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235 | seas=`echo $line | awk ' { print $1 } '` |
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236 | proj=`echo $line | awk ' { print $2 } '` |
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237 | vars=`echo $line | awk ' { print $3 } '` |
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238 | atlas=${sim}+${seas}+${proj}+$vars |
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239 | echo AAAAAAAAAAAAAAAAAAAAAAAA $atlas |
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240 | #grep $atlas $COMP_D/ATLAS/atlas_OK |
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241 | echo BBBBBB |
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242 | #if [ "`grep $atlas $COMP_D/ATLAS/atlas_OK`" = "" ] ; then |
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243 | cd $local/atlas ; pwd ; ls -l atlas.sh |
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244 | varg=`echo $vars | sed -e 's/,/+/g'` |
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245 | echo Atlas $atlas a creer |
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246 | if [ $qsub = 0 ] ; then |
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247 | ./atlas.sh RUN=$sim,SEASON=$seas,PROJ=$proj,OUTDIR=$COMP_D/ATLAS,REF=$ref,VARS="$varg",RUNSTXT=$runstxt |
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248 | else |
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249 | $submit -v RUN=$sim,SEASON=$seas,PROJ=$proj,OUTDIR=$COMP_D/ATLAS,REF=$ref,VARS="$varg",RUNSTXT=$runstxt atlas.sh |
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250 | fi |
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251 | echo $submit -v RUN=$sim,SEASON=$seas,PROJ=$proj,OUTDIR=$COMP_D/ATLAS,REF=$ref,VARS="$varg" atlas.sh >> out.com$$ |
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252 | echo $submit -v RUN=$sim,SEASON=$seas,PROJ=$proj,OUTDIR=$COMP_D/ATLAS,REF=$ref,VARS="$varg" atlas.sh |
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253 | (( count_atlas = $count_atlas + 1 )) |
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254 | (( il = $il + 1 )) |
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255 | done |
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256 | done |
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257 | if [ $count_atlas != 0 ] ; then |
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258 | echo '!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!' |
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259 | echo Les atlas manquant ont ete lances. Attendre leur |
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260 | echo creation pour relancer job_multi.sh |
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261 | echo '!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!' |
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262 | # exit |
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263 | fi |
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264 | |
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265 | fi #newatlas |
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266 | fi #atlas |
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267 | |
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268 | # atlas_cesmep : cles pour activer les nouveau atlas (C-ESM-EP) |
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269 | if [ $atlas_cesmep = 1 ] ; then |
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270 | cd ~/LMDZ/C-ESM-EP |
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271 | ./AtlasLMDZ.sh -runsfile $runstxt $comp |
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272 | fi # atlas_cesmep |
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273 | |
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274 | echo '########################################################################' |
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275 | echo 3/ Calcul des moyennes zonales nco |
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276 | echo '########################################################################' |
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277 | |
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278 | |
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279 | #trace moy.zonale OBS + multi-simulations |
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280 | if [ $zon = 1 ] ; then |
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281 | cd $local |
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282 | mkdir -p $COMP_D/ZON |
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283 | for sim in $listsimse OBS ; do |
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284 | years=`echo $sim | sed -e 's/_SE_/ /' | awk ' { print $2 } '` |
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285 | run=`echo $sim | sed -e 's/_SE_/ /' | awk ' { print $1 } '` |
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286 | ./make_MOY.sh "$years" YEAR "$run" GLOB |
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287 | ./make_MOY.sh "$years" YEAR "$run" ZON |
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288 | ./make_MOY.sh "$years" JJA "$run" ZON |
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289 | ./make_MOY.sh "$years" DJF "$run" ZON |
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290 | ./make_MOY.sh "$years" JJAS "$run" AMMACROSS |
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291 | done |
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292 | cd $local |
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293 | ### ajout nuages LMDZ dans la compa et doit faire des liens symbol. sur |
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294 | #### les OBS calipso toujurs pour le moment |
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295 | ./mk_clouds_NOcalipso.sh YEAR ZON |
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296 | ./mk_clouds_NOcalipso.sh DJF ZON |
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297 | ./mk_clouds_NOcalipso.sh JJA ZON |
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298 | ./mk_clouds_NOcalipso.sh JJAS AMMACROSS |
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299 | # |
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300 | pwd |
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301 | ./multi_ZONE.sh YEAR $comp ZON -runsfile $runstxt |
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302 | ./multi_ZONE.sh JJA $comp ZON -runsfile $runstxt |
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303 | ./multi_ZONE.sh DJF $comp ZON -runsfile $runstxt |
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304 | ./multi_ZONE.sh JJAS $comp AMMACROSS -runsfile $runstxt |
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305 | |
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306 | fi |
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307 | |
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308 | echo '########################################################################' |
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309 | echo 4/ Lancement du 1D si necessaire |
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310 | echo '########################################################################' |
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311 | if [ ! -f $COMP_D/1D/1D.html -a $und = 1 ] ; then |
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312 | cd $COMP_D |
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313 | ~/LMDZ/1D/serie1d.sh $comp |
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314 | cd $local |
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315 | fi |
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316 | |
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317 | echo '########################################################################' |
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318 | echo 5/ Métriques |
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319 | echo '########################################################################' |
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320 | if [ $tuning_metrics = 1 -a ! -d $COMP_D/METRICS ] ; then |
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321 | echo metrics.sh |
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322 | cd $local/METRICS |
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323 | ./metrics.sh $comp |
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324 | fi |
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325 | |
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326 | if [ $regdyn = 1 ]; then |
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327 | cd ~/users/musat/regdyn/clean_regdyn |
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328 | ./mk_all_regdyn.sh $comp 0 |
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329 | cd $local |
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330 | fi |
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331 | |
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332 | if [ $esmval2 = 1 ]; then |
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333 | cd $local |
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334 | ./cvdp4atlas.sh $comp |
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335 | ./perfm4atlas.sh $comp |
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336 | fi |
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337 | |
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338 | if [ $mjo = 1 ]; then |
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339 | cd ~/users/idelkadi/MJO |
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340 | ./make_diagnosMJO.sh $comp |
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341 | fi |
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342 | |
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343 | if [ $river = 1 ]; then |
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344 | cd ~/users/idelkadi/AXE1/River |
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345 | ./make_diagnoRiver.sh $comp |
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346 | fi |
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347 | |
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348 | if [ $lma = 1 ]; then |
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349 | cd $local |
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350 | ./make_lma.sh $comp |
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351 | fi |
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352 | if [ $axe2 = 1 ]; then |
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353 | cd $local |
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354 | ./make_axe2.sh -runstxt $runstxt $comp |
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355 | fi |
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356 | if [ $trmm = 1 ]; then |
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357 | cd ~/users/mbonaz/ |
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358 | ./Axe2_Marine.sh $comp |
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359 | cd $local |
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360 | fi |
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361 | cd $local |
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362 | if [ $pcmdi_metrics = 1 ] ; then |
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363 | ./make_pcmdi.sh $comp |
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364 | fi |
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365 | if [ $axe4 = 1 ]; then |
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366 | cd $local |
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367 | ./make_axe4.sh $comp |
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368 | fi |
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369 | |
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370 | if [ "$reflcld_histo" = "1" ] ; then |
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371 | cd ~/users/idelkadi/AXE3/ |
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372 | ./make_scatReflCld.sh $comp |
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373 | cd $local |
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374 | fi |
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375 | |
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376 | if [ $vertcld_calipso = 1 ] ; then |
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377 | cd ~/users/idelkadi/AXE3/Calipso/CoupeVerticale/DJF |
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378 | ./make_VerticalMzCldCalipso.sh $comp |
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379 | cd ~/users/idelkadi/AXE3/Calipso/CoupeVerticale/JJA |
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380 | ./make_VerticalMzCldCalipso.sh $comp |
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381 | cd ~/users/idelkadi/AXE3/Calipso/Stratos |
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382 | ./make_StratosCalipso.sh $comp |
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383 | fi |
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384 | |
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385 | |
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386 | echo '########################################################################' |
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387 | echo 6/ Stations |
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388 | echo '########################################################################' |
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389 | |
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390 | if [ $stations_day = 1 ] ; then |
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391 | ~/users/Binta/bibi.sh $comp |
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392 | ~/users/cheruy/bibi.sh $comp |
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393 | fi |
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394 | |
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395 | if [ $stations_mth = 1 ] ; then |
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396 | ~/users/traore/SE_buoy.sh $comp |
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397 | fi |
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398 | |
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399 | echo '########################################################################' |
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400 | echo 7/ generation des pages html |
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401 | echo '########################################################################' |
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402 | |
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403 | if [ $html = 1 ] ; then |
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404 | echo ./make_html_libigcm_ai.sh --comp $comp |
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405 | ./make_html_libigcm.sh --comp $comp |
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406 | cd $local |
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407 | ./html_entete.sh ${comp} ${dataref} |
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408 | ./make_index_html.sh ${comp} ${dataref} |
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409 | ./html_tuning.sh $comp |
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410 | ./html_tuning_min.sh $comp |
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411 | ./html_accueil.sh $comp |
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412 | ./html_1D.sh $comp |
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413 | ./html_lma.sh $comp |
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414 | ./html_pcmdi.sh $comp |
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415 | ./html_all.sh >| $MULTIDIR/all.html |
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416 | |
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417 | # html pour les métriques |
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418 | # cat $COMP_D/entete.html doc_pcmdi.html >| $COMP_D/PCMDI.html |
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419 | # ref=`echo $listsimss | awk ' { print $1 } '` |
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420 | # echo "<h1> Metrics with respect to $ref </h1>" >> $COMP_D/PCMDI.html |
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421 | # cat $COMP_D/pcmdi_metrics.html >> $COMP_D/PCMDI.html |
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422 | # echo "<h1> Metrics with respect to AR4.00 </h1>" >> $COMP_D/PCMDI.html |
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423 | # cat $COMP_D/metrics-AR4-as-ref.html >> $COMP_D/PCMDI.html |
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424 | # echo "<h1> Metrics with respect to CMIP5/AMIP multi model </h1>" >> $COMP_D/PCMDI.html |
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425 | # cat $COMP_D/metrics-CMIP5-AMIP-as-ref.html >> $COMP_D/PCMDI.html |
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426 | for i in 1 2 3 4 5 6 7 ; do |
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427 | ./html_axe$i.sh $comp |
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428 | done |
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429 | for proj in GLOB SH NH ; do |
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430 | for bias in BIAS MAPS ; do |
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431 | for season in YEAR DJF JJA ; do |
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432 | echo ./multi_atlas.sh $comp $bias $season $proj $RUNS |
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433 | ./multi_atlas.sh $comp $bias $season $proj $RUNS >> out.com$$ |
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434 | done |
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435 | done |
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436 | done |
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437 | #exit |
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438 | # cd $COMP_D |
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439 | # ln -sf BIASYEAR.html $comp.html |
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440 | # ln -sf ACCUEIL.html $comp.html |
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441 | cd $local |
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442 | ./webpage_multi.sh $comp |
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443 | |
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444 | fi |
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