source: BOL/LMDZ_Setup_amaury/DEF/XMLfilesOR7983/file_def_orchidee.xml @ 5171

Last change on this file since 5171 was 4615, checked in by asima, 16 months ago

Initial import of LMDZ_Setup environment
(former TEST_PROD which was distributed as tutorial_prod.tar).

See also related doc LMDZ_Setup_HowTo (former tutorial_prod_FAQ) :
​https://docs.google.com/document/d/1OLZG6e-86NiXuv5-aALxKIh-QPkp4BdCwWtiBFot-6c

This initial import corresponds to TEST_PROD from
​https://lmdz.lmd.jussieu.fr/pub/Training/Archive/tutorial_prod.tar_v20230707.

Previous versions of tutorial_prod.tar are available at
​https://lmdz.lmd.jussieu.fr/pub/Training/Archive
File size: 55.9 KB
Line 
1<!-- =========================================================================================================== -->
2<!-- file_def_orchidee.xml : Definition of output files                                                          -->
3<!--                                                                                                             -->
4<!-- Definition of each output file and the list of variables they will include.                                 -->
5<!-- Change this file by adding the files and/or variables you want to write.                                    -->
6<!-- Only variables and groups existing in field_def_orchidee.xml can be used.                                   -->
7<!--                                                                                                             -->
8<!-- Note: The keyword _AUTO_ will be changed by the drivers using libIGCM configurations. It can also be        -->
9<!-- changed manually. For example instead of _AUTO_ set :  enabled=".TRUE." or enabled=".FALSE."                -->
10<!-- output_freq="1mo" for monthly, output_freq="1d" for daily, output_freq="10800s" for 3-hour output frequency,-->
11<!-- output_level="1" for few variables, output_level="12" for writing all variables (depending on file).        -->
12<!--                                                                                                             -->
13<!-- Each file can have different output frequence, different variable content and different output_level.       --> 
14<!-- A file will contain all the variables listed in its section having level lower or equal to output_level     -->
15<!-- which is specified for the file.                                                                            -->
16<!--                                                                                                             -->
17<!-- All variables needed for the monitoring done by libIGCM are set to level="0". Set output_level=0 for file   -->
18<!-- sechiba_history, stomate_history and stomate_ipcc_history to output only these variables. These files       -->
19<!-- should have output_freq="1mo" for a correct monitoring except for SPINUP_ANALYTIC where the frequency       -->
20<!-- should be output_freq="1y".                                                                                 -->
21<!--                                                                                                             -->
22<!-- Key word compression_level activates the corresponding compresion level of netcd4/hdf5 where 0              -->
23<!-- corresponds to no compression and 4 is a middle compression here set as default.                            -->
24<!--                                                                                                             -->
25<!-- field group "remap_1xx" do only have a meaning for unstructured grid when remapping of output is activated. -->
26<!-- For this case, remap_1xx will set a corresponding freq_op done from the fortran code.                       -->
27<!-- For regular grid, this group do not contain any attributes so it'll not make any difference.                -->
28<!--                                                                                                             -->
29<!-- $HeadURL: svn://forge.ipsl.jussieu.fr/orchidee/branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/file_def_orchidee.xml $               -->
30<!-- $Date: 2023-04-19 13:48:54 +0200 (mer. 19 avril 2023) $                                                      -->
31<!-- $Revision: 7983 $                                                                                           -->
32<!-- =========================================================================================================== -->
33
34<file_definition type="one_file" par_access="collective" enabled=".TRUE." min_digits="4" compression_level="0" >
35
36  <!-- ========================================================================================================= -->
37  <!-- Definition of output files -->
38  <!-- ========================================================================================================= -->
39
40  <!-- Definition of output files with sechiba diagnostics -->
41
42  <!-- Sechiba file 1 -->
43  <file id="sechiba1" name="sechiba_history" output_level="1" output_freq="1d" type="one_file" enabled=".TRUE.">
44
45   <field_group group_ref="remap_1mo" grid_ref="grid_landpoints_out" >
46    <!-- level 1 -->
47    <field field_ref="areas" level="0"/>
48    <field field_ref="LandPoints" level="20"/>
49    <field field_ref="contfrac" level="0"/>
50    <field field_ref="vevapp_day" level="0"/>
51    <field field_ref="coastalflow" level="0"/>
52    <field field_ref="riverflow" level="0"/>
53    <field field_ref="coastalflow_cpl" level="1"/>
54    <field field_ref="riverflow_cpl" level="1"/>
55    <field field_ref="temp_sol_new_C" level="0"/>
56    <field field_ref="mrsow" level="1"/>
57    <field field_ref="ksat" grid_ref="grid_nslm_out" level="1"/>
58    <field field_ref="ksref" level="1"/>
59    <field field_ref="precip_rain" level="0" name="rain" unit="mm/d" > @precip_rain*86400  </field>
60    <field field_ref="precip_snow" level="0" name="snowf" unit="mm/d" > @precip_snow*86400  </field>
61    <field field_ref="netrad" level="1"/>
62    <field field_ref="lai" grid_ref="grid_nvm_out" level="0"/>
63    <field field_ref="reinf_slope" level="1"/>
64    <field field_ref="njsc" level="1"/>
65    <field field_ref="basinmap" level="1"/>
66    <field field_ref="nbrivers" level="1"/>
67    <field field_ref="npp" grid_ref="grid_nvm_out" level="0"/>
68    <field field_ref="wtd" level="1"/>
69    <field field_ref="tws" level="1"/>
70    <!-- level 2 -->
71    <field field_ref="vevapsno" name="subli" level="0" unit="mm/d" > @vevapsno*86400  </field>
72    <field field_ref="runoff" name="runoff" level="0" unit="mm/d" > @runoff*86400  </field>
73    <field field_ref="drainage" name="drainage" level="0" unit="mm/d" > @drainage*86400  </field>
74    <field field_ref="riversret" level="2"/>
75    <field field_ref="hydrographs" level="2"/>
76    <field field_ref="htuhgmon" name="HTUhydrographs" grid_ref="grid_nbasmon_out" level="2"/>
77    <field field_ref="hydrotemp" name="RiverTemp" level="2"/>
78    <field field_ref="htutempmon" name="HTUTemp" grid_ref="grid_nbasmon_out" level="2"/>
79    <field field_ref="streamlimit" level="2"/>
80    <field field_ref="vevapnu" name="evapnu" level="0" unit="mm/d" > @vevapnu*86400  </field>
81    <field field_ref="evap_bare_lim" level="2"/>
82    <field field_ref="evap_bare_lim_ns" grid_ref="grid_nstm_out" level="2"/>
83    <field field_ref="evapnu_soil" grid_ref="grid_nstm_out" level="2"/>
84    <field field_ref="drainage_soil" grid_ref="grid_nstm_out" level="2"/>
85    <field field_ref="transpir_soil" grid_ref="grid_nstm_out" level="2"/>
86    <field field_ref="runoff_soil" grid_ref="grid_nstm_out" level="2"/>
87    <field field_ref="temp_air" level="0"/>
88    <field field_ref="qair" level="2"/>
89    <field field_ref="soilalb_bg" grid_ref="grid_albtyp_out" level="2"/>
90    <field field_ref="albedo_vis" level="0"/>
91    <field field_ref="albedo_nir" level="0"/>
92    <field field_ref="soilalb_vis" level="2"/>
93    <field field_ref="soilalb_nir" level="2"/>
94    <field field_ref="vegalb_vis" level="2"/>
95    <field field_ref="vegalb_nir" level="2"/>
96    <field field_ref="z0h" level="2"/>
97    <field field_ref="z0m" level="2"/>
98    <field field_ref="roughheight" level="2"/>
99    <field field_ref="transpir" grid_ref="grid_nvm_out" level="0"/>
100    <field field_ref="inter" grid_ref="grid_nvm_out" level="0"/>
101    <!-- for water budget control -->
102    <field field_ref="delsoilmoist_daily" level="0" />
103    <field field_ref="delintercept_daily" level="0" />
104    <field field_ref="delswe_daily" level="0" />
105    <field field_ref="delfastr_daily" level="1" />
106    <field field_ref="delslowr_daily" level="1" />
107    <field field_ref="delstreamr_daily" level="1" />
108    <field field_ref="dellaker_daily" level="1" />
109    <field field_ref="delpondr_daily" level="1" />
110    <field field_ref="delfloodr_daily" level="1" />
111    <field field_ref="delstock_routing_daily" level="0" />
112    <field field_ref="vevapflo" name="evapflo" level="2" unit="mm/d" > @vevapflo*86400 </field>
113    <field field_ref="undermcr" level="2"/>
114    <field field_ref="ru_corr" level="2"/>
115    <field field_ref="ru_corr2" level="2"/>
116    <field field_ref="dr_corr" level="2"/>
117    <field field_ref="dr_force" level="2"/>
118    <field field_ref="ru_infilt" level="2"/>
119    <field field_ref="qinfilt" level="2"/>
120    <field field_ref="dr_corrnum" level="2"/>
121    <!-- level 3 -->
122    <field field_ref="tsol_max" level="3"/>
123    <field field_ref="tsol_min" level="3"/>
124    <field field_ref="fluxsens" level="0"/>
125    <field field_ref="fluxlat" level="0"/>
126    <field field_ref="snow" level="0"/>
127   
128    <field field_ref="snowage" level="3"/>
129    <field field_ref="snownobio" grid_ref="grid_nnobio_out" level="0"/>
130    <field field_ref="snownobioage" grid_ref="grid_nnobio_out" level="3"/>
131    <field field_ref="vegetfrac" grid_ref="grid_nvm_out" level="0"/>
132    <field field_ref="maxvegetfrac" grid_ref="grid_nvm_out" level="0"/>
133    <field field_ref="tot_bare_soil" level="3"/>
134    <field field_ref="nobiofrac" grid_ref="grid_nnobio_out" level="0"/>
135    <field field_ref="reinfiltration" level="3"/>
136    <field field_ref="frac_bare" grid_ref="grid_nvm_out" level="3"/>
137    <field field_ref="soiltile" grid_ref="grid_nstm_out" level="3"/>
138    <field field_ref="qflux" grid_ref="grid_nslm_out" level="3"/> 
139    <field field_ref="check_top" level="3"/>
140    <field field_ref="check_infilt" level="3"/>
141    <field field_ref="check_tr" level="3"/>
142    <field field_ref="check_over" level="3"/>
143    <field field_ref="check_under" level="3"/>
144   
145    <!-- level 4 -->
146    <field field_ref="humtot" level="4"/>
147    <field field_ref="tmc" grid_ref="grid_nstm_out" level="4"/>
148    <field field_ref="qsintveg" grid_ref="grid_nvm_out" level="4"/>
149    <field field_ref="rstruct" grid_ref="grid_nvm_out" level="4"/>
150    <field field_ref="r_soil" level="4"/>
151    <field field_ref="gpp" grid_ref="grid_nvm_out" level="0"/>
152    <field field_ref="gpp_ipcc2" level="4"/>
153    <field field_ref="gppgrass" level="4"/>
154    <field field_ref="gppcrop" level="0"/>
155    <field field_ref="gpptree" level="4"/>
156    <field field_ref="nee" grid_ref="grid_nvm_out" level="0"/>
157    <field field_ref="maint_resp" grid_ref="grid_nvm_out" level="0"/>
158    <field field_ref="hetero_resp" grid_ref="grid_nvm_out" level="0"/>
159    <field field_ref="growth_resp" grid_ref="grid_nvm_out" level="0"/>
160    <field field_ref="rh_ipcc2" level="4"/>
161    <field field_ref="rhGrass" level="4"/>
162    <field field_ref="rhCrop" level="0"/>
163    <field field_ref="rhTree" level="4"/>
164    <field field_ref="precisol" grid_ref="grid_nvm_out" level="0"/>
165    <field field_ref="throughfall" grid_ref="grid_nvm_out" level="4"/>
166    <field field_ref="drysoil_frac" level="4"/>
167    <field field_ref="evapot" level="4"/>
168    <field field_ref="evapot_corr" level="4"/>
169    <!-- level 5 -->
170    <field field_ref="swnet" level="5"/>
171    <field field_ref="swdown" level="0"/>
172    <field field_ref="lwdown" level="0"/>
173    <field field_ref="lwnet" level="5"/>
174    <field field_ref="diffevap" level="5"/>
175    <field field_ref="snowmelt" level="5"/>
176    <field field_ref="tot_melt" level="5"/>
177    <field field_ref="snowmelt_from_maxmass" level="5"/>
178    <field field_ref="soilcap" level="5"/>
179    <!-- level 6 -->
180    <field field_ref="twbr" level="0"/>
181    <field field_ref="ptn" grid_ref="grid_ngrnd_out" level="6"/>
182    <!-- level 7 -->
183    <field field_ref="fastr" level="7"/>
184    <field field_ref="slowr" level="7"/>
185    <field field_ref="streamr" level="7"/>
186    <field field_ref="laker" level="7"/>
187    <field field_ref="lake_overflow" level="7"/>
188    <field field_ref="mask_coast" level="7"/>
189    <!-- level 8 -->
190    <field field_ref="wbr_fast" level="8"/>
191    <field field_ref="wbr_slow" level="8"/>
192    <field field_ref="wbr_stream" level="8"/>
193    <field field_ref="wbr_lake" level="8"/>
194    <field field_ref="pondr" level="8"/>
195    <field field_ref="swampmap" level="8"/>
196    <field field_ref="irrigation" name="irrigation" level="8" unit="mm/d" > @irrigation*86400  </field>
197    <field field_ref="netirrig" name="netirrig" level="8" unit="mm/d" > @netirrig*86400  </field>
198    <field field_ref="irrigmap" level="8"/>
199    <field field_ref="floodmap" level="8"/>
200    <field field_ref="flood_frac" name="flood_frac" level="8"/>
201    <field field_ref="floodh" level="8"/>
202    <field field_ref="floodr" level="8"/>
203    <field field_ref="floodout" level="8"/>
204    <field field_ref="k_litt" level="8"/>
205    <field field_ref="beta" level="8"/>
206    <field field_ref="raero" level="8"/>
207    <field field_ref="q_cdrag" level="8"/>
208    <field field_ref="wind" level="8"/>
209    <field field_ref="qsatt" level="8"/>
210    <field field_ref="vbeta1" level="8"/>
211    <field field_ref="vbeta4" level="8"/>
212    <field field_ref="vbeta5" level="8"/>
213    <field field_ref="gsmean" grid_ref="grid_nvm_out" level="8"/>
214    <field field_ref="humrel" grid_ref="grid_nvm_out" level="0"/>
215    <!-- level 10 -->
216    <field field_ref="cimean" grid_ref="grid_nvm_out" level="10"/>
217    <field field_ref="vbeta3" grid_ref="grid_nvm_out" level="10"/>
218    <field field_ref="rveget" grid_ref="grid_nvm_out" level="10"/>
219    <field field_ref="vbeta2" grid_ref="grid_nvm_out" level="10"/>
220    <field field_ref="qsintmax" grid_ref="grid_nvm_out" level="10"/>
221    <field field_ref="dtes" level="10"/>
222    <field field_ref="tairmax"  level="10"/>
223    <field field_ref="tasmax"  level="10"/>
224    <field field_ref="tairmin"  level="10"/>
225    <field field_ref="tasmin"  level="10"/>
226    <!-- level 11 -->
227    <field field_ref="clayfraction" grid_ref="grid_nslm_out" level="11"/>
228    <field field_ref="sandfraction" grid_ref="grid_nslm_out" level="11"/>
229    <field field_ref="siltfraction" grid_ref="grid_nslm_out" level="11"/>
230    <field field_ref="humtot_top" level="0"/>
231    <field field_ref="humtot" name="mrso" level="0"/>
232    <field field_ref="runoff" name="mrros" level="11"/>
233    <field field_ref="mrro" level="11"/>
234    <field field_ref="prveg" level="11"/>
235    <field field_ref="evspsblveg" level="11"/>
236    <field field_ref="evspsblsoi" level="11"/>
237    <field field_ref="tran" level="11"/>
238    <field field_ref="vegFrac" level="11"/>
239    <field field_ref="treeFrac" level="11"/>
240    <field field_ref="treeFracNdlEvg" level="11"/>
241    <field field_ref="treeFracBdlEvg" level="11"/>
242    <field field_ref="treeFracNdlDcd" level="11"/>
243    <field field_ref="treeFracBdlDcd" level="11"/>
244    <field field_ref="grassFrac" level="11"/>
245    <field field_ref="grassFracC3" level="11"/>
246    <field field_ref="grassFracC4" level="11"/>
247    <field field_ref="cropFrac" level="11"/>
248    <field field_ref="cropFracC3" level="11"/>
249    <field field_ref="cropFracC4" level="11"/>
250    <field field_ref="baresoilFrac" level="11"/>
251    <field field_ref="residualFrac" level="11"/>
252    <field field_ref="PAR" level="11"/>
253    <field field_ref="PARsun" grid_ref="grid_nvm_out" level="11"/>
254    <field field_ref="PARsh" grid_ref="grid_nvm_out" level="11"/>
255    <field field_ref="laisun" grid_ref="grid_nvm_out" level="11"/>
256    <field field_ref="laish" grid_ref="grid_nvm_out" level="11"/>
257    <field field_ref="PARsuntab" grid_ref="grid_nlaip1_out" level="11"/>
258    <field field_ref="PARshtab" grid_ref="grid_nlaip1_out" level="11"/>
259    <field field_ref="coszang" level="11"/>
260    <field field_ref="PARdf" level="11"/>
261    <field field_ref="PARdr" level="11"/>
262    <field field_ref="flx_fertil_no" grid_ref="grid_nvm_out" level="11"/>
263    <field field_ref="CRF" grid_ref="grid_nvm_out" level="11"/>
264    <field field_ref="flx_co2_bbg_year" level="11"/>
265    <field field_ref="N_qt_WRICE_year" level="11"/>
266    <field field_ref="N_qt_OTHER_year" level="11"/>
267    <field field_ref="flx_iso" grid_ref="grid_nvm_out" level="11"/>
268    <field field_ref="flx_mono" grid_ref="grid_nvm_out" level="11"/>
269    <field field_ref="flx_ORVOC" grid_ref="grid_nvm_out" level="11"/>
270    <field field_ref="flx_MBO" grid_ref="grid_nvm_out" level="11"/>
271    <field field_ref="flx_methanol" grid_ref="grid_nvm_out" level="11"/>
272    <field field_ref="flx_acetone" grid_ref="grid_nvm_out" level="11"/>
273    <field field_ref="flx_acetal" grid_ref="grid_nvm_out" level="11"/>
274    <field field_ref="flx_formal" grid_ref="grid_nvm_out" level="11"/>
275    <field field_ref="flx_acetic" grid_ref="grid_nvm_out" level="11"/>
276    <field field_ref="flx_formic" grid_ref="grid_nvm_out" level="11"/>
277    <field field_ref="flx_no_soil" grid_ref="grid_nvm_out" level="11"/>
278    <field field_ref="flx_no" grid_ref="grid_nvm_out" level="11"/>
279    <field field_ref="pb" level="11"/>
280    <field field_ref="slowflow" level="11"/>
281    <field field_ref="qsintveg_tot" level="11"/>
282    <field field_ref="LAImean" level="0"/>
283    <field field_ref="mcs" grid_ref="grid_nslm_out" level="11"/>
284    <field field_ref="mcr" grid_ref="grid_nslm_out" level="11"/>
285    <field field_ref="mc_layh" grid_ref="grid_nslm_out" level="11"/>
286    <field field_ref="mcl_layh" grid_ref="grid_nslm_out" level="11"/>
287    <field field_ref="nvg" grid_ref="grid_nslm_out" level="11"/>
288    <field field_ref="alphavg" grid_ref="grid_nslm_out" level="11"/>
289    <field field_ref="nroot" grid_ref="grid_nslm_out" level="11"/>
290    <field field_ref="dlh" grid_ref="grid_nslm_out" level="11"/>
291    <field field_ref="water2infilt" grid_ref="grid_nstm_out" level="11"/>
292    <field field_ref="flx_apinen" grid_ref="grid_nvm_out"  level="11" />
293    <field field_ref="flx_bpinen" grid_ref="grid_nvm_out"  level="11" />
294    <field field_ref="flx_limonen" grid_ref="grid_nvm_out" level="11" />
295    <field field_ref="flx_myrcen" grid_ref="grid_nvm_out"  level="11" />
296    <field field_ref="flx_sabinen" grid_ref="grid_nvm_out" level="11" />
297    <field field_ref="flx_camphen" grid_ref="grid_nvm_out" level="11" />
298    <field field_ref="flx_3caren" grid_ref="grid_nvm_out"  level="11" />
299    <field field_ref="flx_tbocimen" grid_ref="grid_nvm_out" level="11"/>
300    <field field_ref="flx_othermono" grid_ref="grid_nvm_out" level="11"/>
301    <field field_ref="flx_sesquiter" grid_ref="grid_nvm_out" level="11"/>
302    <field field_ref="fco2" grid_ref="grid_nvm_out" level="11"/>
303    <field field_ref="cim" grid_ref="grid_nvm_out" level="11"/>
304    <field field_ref="kk_moy" grid_ref="grid_nslm_out" level="11"/>
305    <field field_ref="psi_moy" grid_ref="grid_nslm_out" level="11"/>
306    <field field_ref="profil_froz_hydro" grid_ref="grid_nslm_out" level="11"/>
307    <field field_ref="pkappa" grid_ref="grid_ngrnd_out"  level="11"/>
308    <field field_ref="pkappa_snow" grid_ref="grid_nsnow_out" level="11"/>
309    <field field_ref="pcapa" grid_ref="grid_ngrnd_out"  level="11"/>
310    <field field_ref="pcapa_spec" grid_ref="grid_ngrnd_out"  level="11"/>
311    <field field_ref="pcapa_snow" grid_ref="grid_nsnow_out"  level="11"/>
312    <field field_ref="snowtemp" grid_ref="grid_nsnow_out"  level="11"/>
313    <field field_ref="snowtemp_weighted"  level="0"/>
314    <field field_ref="snowliq" grid_ref="grid_nsnow_out"  level="11"/>
315    <field field_ref="snowdz" grid_ref="grid_nsnow_out"  level="11"/>
316    <field field_ref="snowrho" grid_ref="grid_nsnow_out"  level="11"/>
317    <field field_ref="snowheat" grid_ref="grid_nsnow_out"  level="11"/>
318    <field field_ref="snowgrain" grid_ref="grid_nsnow_out"  level="11"/>
319    <field field_ref="snowdepth"  level="11"/>
320    <field field_ref="frac_snow"  level="0"/>
321    <field field_ref="snowliqtot"  level="11"/>
322    <field field_ref="albedo_snow"  level="11"/>
323    <field field_ref="snowage_glob"  level="11"/>
324    <field field_ref="lake_overflow_coast" level="7"/>
325    <field field_ref="fraclut" grid_ref="grid_nlut_out" level="11"/>
326    <field field_ref="nwdFraclut" grid_ref="grid_nlut_out" level="11"/>
327    <field field_ref="humtot_lut" grid_ref="grid_nlut_out"  level="11"/>
328    <field field_ref="humtot_top_lut" grid_ref="grid_nlut_out"  level="11"/>
329    <field field_ref="mrro_lut" grid_ref="grid_nlut_out"  level="11"/>
330    <field field_ref="gpplut" grid_ref="grid_nlut_out"  level="11"/>
331    <field field_ref="nudgincswe" level="11"/>
332    <field field_ref="nudgincsm" level="11"/>
333    <field field_ref="cnc" level="11"/>
334    <field field_ref="mcfc" grid_ref="grid_nslm_out" level="11"/>
335    <field field_ref="mcw" grid_ref="grid_nslm_out" level="11"/>
336    <field field_ref="tmcs" level="11"/>
337    <field field_ref="tmcfc" level="11"/>
338    <field field_ref="wilt" grid_ref="grid_nslm_out" level="11"/>
339    <field field_ref="fldcapacity" grid_ref="grid_nslm_out" level="11"/>
340    <field field_ref="znetco2" level="11" />
341    <field field_ref="zcarblu" level="11" />
342    <field field_ref="zcarbwh" level="11" />
343    <field field_ref="zcarbha" level="11" />
344    <field field_ref="frac_snow_veg"  level="12"/>
345    <field field_ref="frac_snow_nobio" grid_ref="grid_nnobio_out"  level="12"/>
346    <field field_ref="snowdz_read_current" grid_ref="grid_nsnow_out"  level="12"/>
347    <field field_ref="snowrho_read_current" grid_ref="grid_nsnow_out"  level="12"/>
348    <field field_ref="snowtemp_read_current" grid_ref="grid_nsnow_out"  level="12"/>
349    <field field_ref="mask_snow_interp_out" grid_ref="grid_nsnow_out"  level="12"/>
350
351     <!-- Irrigation scheme  -->
352     <field field_ref="irrigation" name="Qirrig" level="8"/>
353     <field field_ref="irrig_gw_source" name="Qirrig_gw" level="8"/>
354     <field field_ref="irrig_gw_source" name="irrig_gw_source" level="8" unit="mm/d" > this*86400  </field>
355     <field field_ref="irrig_fast_source" name="Qirrig_fast" level="8"/>
356     <field field_ref="irrig_fast_source" name="irrig_fast_source" level="8" unit="mm/d" > this*86400  </field>
357     <field field_ref="irrig_str_source" name="Qirrig_str" level="8"/>
358     <field field_ref="irrig_str_source" name="irrig_str_source" level="8" unit="mm/d" > this*86400  </field>
359     <field field_ref="netirrig" name="Qirrig_req" long_name="Irrigation requirement" level="8"/>
360     <field field_ref="soilflx" level="8"/>
361     <field field_ref="irrig_deficit" name="Qirrig_deficit" level="8"/>
362     <field field_ref="irrig_deficit" name="irrig_deficit" level="8" unit="mm/d" > this*86400  </field>
363     <field field_ref="irrig_adduct" name="Qirrig_adduct" level="8"/>
364     <field field_ref="irrig_adduct" name="irrig_adduct" level="8" unit="mm/d" > this*86400  </field>
365     <field field_ref="Count_failure_slow" name="Count_failure_slow" level="8"/>
366     <field field_ref="Count_failure_fast" name="Count_failure_fast" level="8"/>
367     <field field_ref="Count_failure_stre" name="Count_failure_stre" level="8"/>
368     <!--field field_ref="PotSurfT" level="8"/-->
369     <field field_ref="transpot" grid_ref="grid_nvm_out" level="8"/>
370     <field field_ref="vbeta3pot" grid_ref="grid_nvm_out" level="8"/>
371     <field field_ref="root_deficit" level="8"/>
372     <field field_ref="root_mc_fc" level="8"/>
373     <field field_ref="irrigmap_dyn" level="8"/>
374     <field field_ref="aei_sw" level="8"/>
375
376   </field_group>
377  </file>
378
379  <!-- Sechiba file 2 -->
380  <file id="sechiba2" name="sechiba_out_2" output_level="1" output_freq="1d" type="one_file" enabled=".FALSE.">
381   <field_group group_ref="remap_1mo" grid_ref="grid_landpoints_out" >
382    <!-- level 1 -->
383    <field field_ref="areas" level="1"/>
384    <field field_ref="LandPoints" level="20"/>
385    <field field_ref="contfrac" level="1"/>
386    <field field_ref="humtot_top" level="1"/>
387    <field field_ref="mrro" level="1"/>
388    <field field_ref="ptn" grid_ref="grid_ngrnd_out" level="1"/>
389    <field field_ref="wtd" level="1"/>
390    <field field_ref="tws" level="1"/>
391   
392    <!-- level 2 -->
393    <field field_ref="q_cdrag" level="2"/>
394    <field field_ref="soilalb_vis" level="2"/>
395    <field field_ref="soilalb_nir" level="2"/>
396    <field field_ref="vegalb_vis" level="2"/>
397    <field field_ref="vegalb_nir" level="2"/>
398    <field field_ref="z0m" level="2"/>
399    <field field_ref="z0h" level="2"/>
400    <field field_ref="coastalflow" level="2"/>
401    <field field_ref="riverflow" level="2"/>
402    <field field_ref="tsol_rad" level="2"/>
403    <field field_ref="vevapnu" name="evapnu" level="2" unit="mm/d" > @vevapnu*86400  </field>
404    <field field_ref="temp_sol_new_C" level="2"/>
405    <field field_ref="qsurf" level="2"/>
406    <field field_ref="fluxsens" level="2"/>
407    <field field_ref="fluxlat" level="2"/>
408    <field field_ref="emis" level="2"/>
409    <field field_ref="riversret" level="2"/>
410    <field field_ref="hydrographs" level="2"/>
411    <field field_ref="undermcr" level="2"/>
412    <field field_ref="ru_corr" level="2"/>
413    <field field_ref="ru_corr2" level="2"/>
414    <field field_ref="dr_corr" level="2"/>
415    <field field_ref="dr_force" level="2"/>
416    <field field_ref="ru_infilt" level="2"/>
417    <field field_ref="qinfilt" level="2"/>
418    <field field_ref="dr_corrnum" level="2"/>
419    <!-- level 3 -->
420    <field field_ref="vevapp_day" level="3"/>
421    <field field_ref="precip_rain" level="3" name="rain" unit="mm/d" > @precip_rain*86400  </field>
422    <field field_ref="precip_snow" level="3" name="snowf" unit="mm/d" > @precip_snow*86400  </field>
423    <field field_ref="netrad" level="3"/>
424    <field field_ref="lai" grid_ref="grid_nvm_out" level="3"/>
425    <field field_ref="basinmap" level="3"/>
426    <field field_ref="nbrivers" level="3"/>
427    <field field_ref="check_infilt" level="3"/>
428    <field field_ref="check_tr" level="3"/>
429    <field field_ref="check_over" level="3"/>
430    <field field_ref="check_under" level="3"/>
431     
432
433    <!-- level 4 -->
434    <field field_ref="vevapsno" name="subli" level="4" unit="mm/d" > @vevapsno*86400  </field>
435    <field field_ref="runoff" name="runoff" level="4" unit="mm/d" > @runoff*86400  </field>
436    <field field_ref="drainage" name="drainage" level="4" unit="mm/d" > @drainage*86400  </field>
437    <field field_ref="temp_air" level="4"/>
438    <field field_ref="qair" level="4"/>
439    <field field_ref="albedo_vis" level="4"/>
440    <field field_ref="albedo_nir" level="4"/>
441    <field field_ref="roughheight" level="4"/>
442    <field field_ref="transpir" grid_ref="grid_nvm_out" level="4"/>
443    <field field_ref="inter" grid_ref="grid_nvm_out" level="4"/>
444    <field field_ref="evapnu_soil" grid_ref="grid_nstm_out" level="4"/>
445    <field field_ref="drainage_soil" grid_ref="grid_nstm_out" level="4"/>
446    <field field_ref="transpir_soil" grid_ref="grid_nstm_out" level="4"/>
447    <field field_ref="runoff_soil" grid_ref="grid_nstm_out" level="4"/>
448    <!-- level 5 -->
449    <field field_ref="tsol_max" level="5"/>
450    <field field_ref="tsol_min" level="5"/>
451    <field field_ref="snow" level="5"/>
452    <field field_ref="snowage" level="5"/>
453    <field field_ref="snownobio" grid_ref="grid_nnobio_out" level="5"/>
454    <field field_ref="snownobioage" grid_ref="grid_nnobio_out" level="5"/>
455    <field field_ref="snowmelt" level="5"/>
456    <field field_ref="tot_melt" level="5"/>
457    <field field_ref="snowmelt_from_maxmass" level="5"/>
458    <field field_ref="soilcap" level="5"/>
459    <field field_ref="vegetfrac" grid_ref="grid_nvm_out" level="5"/>
460    <field field_ref="maxvegetfrac" grid_ref="grid_nvm_out" level="5"/>
461    <field field_ref="nobiofrac" grid_ref="grid_nnobio_out" level="5"/>
462    <!-- level 6 -->
463    <field field_ref="humtot" level="6"/>
464    <field field_ref="humtot_liquid" level="6"/>
465    <field field_ref="tmc" grid_ref="grid_nstm_out" level="6"/>
466    <field field_ref="qsintveg" grid_ref="grid_nvm_out" level="6"/>
467    <field field_ref="rstruct" grid_ref="grid_nvm_out" level="6"/>
468    <field field_ref="r_soil" level="6"/>
469    <field field_ref="gpp" grid_ref="grid_nvm_out" level="6"/>
470    <field field_ref="nee" grid_ref="grid_nvm_out" level="6"/>
471    <field field_ref="maint_resp" grid_ref="grid_nvm_out" level="6"/>
472    <field field_ref="hetero_resp" grid_ref="grid_nvm_out" level="6"/>
473    <field field_ref="growth_resp" grid_ref="grid_nvm_out" level="6"/>
474    <field field_ref="npp" grid_ref="grid_nvm_out" level="6"/>
475    <field field_ref="precisol" grid_ref="grid_nvm_out" level="6"/>
476    <field field_ref="drysoil_frac" level="6"/>
477    <field field_ref="evapot" level="6"/>
478    <field field_ref="evapot_corr" level="6"/>
479    <field field_ref="twbr" level="6"/>
480    <!-- level 7 -->
481    <field field_ref="swnet" level="7"/>
482    <field field_ref="swdown" level="7"/>
483    <field field_ref="lwdown" level="7"/>
484    <field field_ref="lwnet" level="7"/>
485    <field field_ref="diffevap" level="7"/>
486    <!-- level 8 -->
487    <field field_ref="fastr" level="8"/>
488    <field field_ref="slowr" level="8"/>
489    <field field_ref="streamr" level="8"/>
490    <field field_ref="floodr" level="8"/>
491    <field field_ref="floodh" level="8"/>
492    <field field_ref="pondr" level="8"/>
493    <field field_ref="laker" level="8"/>
494    <field field_ref="irrigation" name="irrigation" level="8" unit="mm/d" > @irrigation*86400  </field>
495    <field field_ref="netirrig" name="netirrig" level="8" unit="mm/d" > @netirrig*86400  </field>
496    <field field_ref="irrigmap" level="8"/>
497    <field field_ref="floodmap" level="8"/>
498    <field field_ref="flood_frac" name="flood_frac" level="8"/>
499    <field field_ref="swampmap" level="8"/>
500    <field field_ref="vevapflo" name="evapflo" level="8" unit="mm/d" > @vevapflo*86400 </field>
501
502    <!-- level 9 -->
503    <field field_ref="beta" level="9"/>
504    <field field_ref="raero" level="9"/>
505    <field field_ref="wind" level="9"/>
506    <field field_ref="qsatt" level="9"/>
507    <field field_ref="vbeta1" level="9"/>
508    <field field_ref="vbeta4" level="9"/>
509    <field field_ref="gsmean" grid_ref="grid_nvm_out" level="9"/>
510    <field field_ref="vbeta5" level="9"/>
511    <field field_ref="reinf_slope" level="9"/>
512    <field field_ref="njsc" level="9"/>
513    <field field_ref="humrel" grid_ref="grid_nvm_out" level="9"/>
514    <!-- level 10 -->
515    <field field_ref="cimean" grid_ref="grid_nvm_out" level="10"/>
516    <field field_ref="vbeta3" grid_ref="grid_nvm_out" level="10"/>
517    <field field_ref="rveget" grid_ref="grid_nvm_out" level="10"/>
518    <field field_ref="vbeta2" grid_ref="grid_nvm_out" level="10"/>
519    <field field_ref="qsintmax" grid_ref="grid_nvm_out" level="10"/>
520    <field field_ref="PAR" level="10"/>
521    <field field_ref="PARsun" grid_ref="grid_nvm_out" level="10"/>
522    <field field_ref="PARsh" grid_ref="grid_nvm_out" level="10"/>
523    <field field_ref="laisun" grid_ref="grid_nvm_out" level="10"/>
524    <field field_ref="laish" grid_ref="grid_nvm_out" level="10"/>
525    <field field_ref="PARsuntab" grid_ref="grid_nlaip1_out" level="10"/>
526    <field field_ref="PARshtab" grid_ref="grid_nlaip1_out" level="10"/>
527    <field field_ref="coszang" level="10"/>
528    <field field_ref="PARdf" level="10"/>
529    <field field_ref="PARdr" level="10"/>
530    <field field_ref="flx_fertil_no" grid_ref="grid_nvm_out" level="10"/>
531    <field field_ref="CRF" grid_ref="grid_nvm_out" level="10"/>
532    <field field_ref="flx_co2_bbg_year" level="10"/>
533    <field field_ref="N_qt_WRICE_year" level="10"/>
534    <field field_ref="N_qt_OTHER_year" level="10"/>
535    <field field_ref="flx_iso" grid_ref="grid_nvm_out" level="10"/>
536    <field field_ref="flx_mono" grid_ref="grid_nvm_out" level="10"/>
537    <field field_ref="flx_ORVOC" grid_ref="grid_nvm_out" level="10"/>
538    <field field_ref="flx_MBO" grid_ref="grid_nvm_out" level="10"/>
539    <field field_ref="flx_methanol" grid_ref="grid_nvm_out" level="10"/>
540    <field field_ref="flx_acetone" grid_ref="grid_nvm_out" level="10"/>
541    <field field_ref="flx_acetal" grid_ref="grid_nvm_out" level="10"/>
542    <field field_ref="flx_formal" grid_ref="grid_nvm_out" level="10"/>
543    <field field_ref="flx_acetic" grid_ref="grid_nvm_out" level="10"/>
544    <field field_ref="flx_formic" grid_ref="grid_nvm_out" level="10"/>
545    <field field_ref="flx_no_soil" grid_ref="grid_nvm_out" level="10"/>
546    <field field_ref="flx_no" grid_ref="grid_nvm_out" level="10"/>
547    <field field_ref="pb" level="11"/>
548    <field field_ref="slowflow" level="11"/>
549    <field field_ref="qsintveg_tot" level="11"/>
550    <field field_ref="LAImean" level="11"/>
551    <field field_ref="mcs" grid_ref="grid_nslm_out" level="11"/>
552    <field field_ref="mcr" grid_ref="grid_nslm_out" level="11"/>
553    <field field_ref="nvg" grid_ref="grid_nslm_out" level="11"/>
554    <field field_ref="alphavg" grid_ref="grid_nslm_out" level="11"/>
555    <field field_ref="nroot" grid_ref="grid_nslm_out" level="11"/>
556    <field field_ref="dlh" grid_ref="grid_nslm_out" level="11"/>
557    <field field_ref="water2infilt" grid_ref="grid_nstm_out" level="11"/>
558    <field field_ref="kk_moy" grid_ref="grid_nslm_out" level="11"/>
559    <field field_ref="psi_moy" grid_ref="grid_nslm_out" level="11"/>
560    <field field_ref="profil_froz_hydro" grid_ref="grid_nslm_out" level="11"/>
561    <field field_ref="pkappa" grid_ref="grid_ngrnd_out"  level="11"/>
562    <field field_ref="pkappa_snow" grid_ref="grid_nsnow_out" level="11"/>
563    <field field_ref="pcapa" grid_ref="grid_ngrnd_out"  level="11"/>
564    <field field_ref="pcapa_spec" grid_ref="grid_ngrnd_out"  level="11"/>
565    <field field_ref="pcapa_snow" grid_ref="grid_nsnow_out"  level="11"/>
566    <field field_ref="snowtemp" grid_ref="grid_nsnow_out"  level="0"/>
567    <field field_ref="snowtemp_weighted"  level="11"/>
568    <field field_ref="snowliq" grid_ref="grid_nsnow_out"  level="11"/>
569    <field field_ref="snowdz" grid_ref="grid_nsnow_out"  level="0"/>
570    <field field_ref="snowrho" grid_ref="grid_nsnow_out"  level="0"/>
571    <field field_ref="snowheat" grid_ref="grid_nsnow_out"  level="11"/>
572    <field field_ref="snowgrain" grid_ref="grid_nsnow_out"  level="11"/>
573    <field field_ref="snowdepth"  level="11"/>
574    <field field_ref="mc" grid_ref="grid_nslm_nstm_out" level="0"/>   <!-- mc is a 4 dimensional variable -->
575    <field field_ref="znetco2" level="11" />
576    <field field_ref="zcarblu" level="11" />
577    <field field_ref="zcarbwh" level="11" />
578    <field field_ref="zcarbha" level="11" />
579    </field_group>
580  </file>
581
582  <!-- Sechiba file 3 -->
583  <!-- This files contains all variables having more than one vertical axis -->
584  <file id="sechiba3" name="sechiba_history_4dim" output_level="1" output_freq="1d" type="one_file" enabled=".FALSE.">
585   <field_group group_ref="remap_1mo" grid_ref="grid_landpoints_out" >
586    <field field_ref="areas" level="1"/>
587    <field field_ref="contfrac" level="1"/>
588    <field field_ref="mc" grid_ref="grid_nslm_nstm_out" level="1"/>
589    <field field_ref="mc_read_current" grid_ref="grid_nslm_nstm_out" level="2"/>
590    <field field_ref="kfact_root" grid_ref="grid_nslm_nstm_out" level="3"/>
591    <field field_ref="vegetmax_soil" grid_ref="grid_nvm_nstm_out" level="3"/>
592    <field field_ref="profil_froz_hydro_ns" grid_ref="grid_nslm_nstm_out" level="11"/>
593   </field_group> 
594  </file>
595
596
597  <!-- Sechiba alma file 1 -->
598  <file id="sechiba1_alma" name="sechiba_history_alma" output_level="10" output_freq="1mo" enabled=".FALSE.">
599   <field_group group_ref="remap_1mo" grid_ref="grid_landpoints_out" >
600    <field field_ref="areas" level="1"/>
601    <field field_ref="LandPoints" level="20"/>
602    <field field_ref="contfrac" level="1"/>
603    <field field_ref="soilflx" level="1"/>
604    <field field_ref="Qv" level="1"/>
605    <field field_ref="runoff" name="Qs" level="1"/>
606    <field field_ref="drainage" name="Qsb" level="1"/>
607    <field field_ref="coastalflow" name="CoastalFlow" level="1"/>
608    <field field_ref="riverflow" name="RiverFlow" level="1"/>
609    <field field_ref="surfheat_incr" level="1"/>
610    <field field_ref="coldcont_incr" level="1"/>
611    <field field_ref="fluxsens" name="Qh" level="1"/>
612    <field field_ref="fluxlat" name="Qle" level="1"/>
613    <field field_ref="lwnet" name="LWnet" level="1"/>
614    <field field_ref="swnet" name="SWnet" level="1"/>
615    <field field_ref="precip_rain" name="Rainf" level="1"/>
616    <field field_ref="precip_snow" name="Snowf" level="1"/>
617    <field field_ref="vevapp" name="Evap" level="1"/>
618    <field field_ref="tot_melt" name="Qsm" level="1"/>
619    <field field_ref="irrigation" name="Qirrig" level="1"/>
620    <field field_ref="netirrig" name="Qirrig_req" long_name="Irrigation requirement" level="1"/>
621    <field field_ref="temp_sol_new" level="1"/>
622    <field field_ref="fastr" level="1"/>
623    <field field_ref="slowr" level="1"/>
624    <field field_ref="streamr" level="1"/>
625    <field field_ref="laker" level="1"/>
626    <field field_ref="pondr" level="1"/>
627    <field field_ref="albedo_glob" level="1"/>
628    <field field_ref="soilalb_bg" grid_ref="grid_albtyp_out" name="Albedo_Background" level="1"/>
629    <field field_ref="SurfStor" level="1"/>
630    <field field_ref="snow" name="SWE" long_name="Snow Water Equivalent" level="1"/>
631    <field field_ref="soilwet" level="1"/>
632    <field field_ref="evapot_corr" name="PotEvap" long_name="Potential evapotranspiration" unit="kg/m^2/s" level="1"/>
633    <field field_ref="evapot" name="PotEvapOld" long_name="Potential evapotranspiration old method" unit="kg/m^2/s" level="1"/>
634    <field field_ref="ECanop" level="1"/>
635    <field field_ref="TVeg" level="1"/>
636    <field field_ref="vevapsno" name="SubSnow" level="1"/>
637    <field field_ref="irrigmap" name="IrrigationMap" level="1"/>
638    <field field_ref="floodmap" name="FloodplainsMap" level="1"/>
639    <field field_ref="flood_frac" name="flood_frac" level="1"/>
640    <field field_ref="swampmap" name="SwampMap" level="1"/>
641    <field field_ref="hydrographs" name="Dis" level="1"/>
642    <field field_ref="htuhgmon" name="HTUDis" grid_ref="grid_nbasmon_out" level="1"/>
643    <field field_ref="gpp" grid_ref="grid_nvm_out" name="GPP" level="1"/>
644    <field field_ref="nee" grid_ref="grid_nvm_out" name="NEE" level="1"/>
645    <field field_ref="maint_resp" grid_ref="grid_nvm_out" level="1"/>
646    <field field_ref="hetero_resp" grid_ref="grid_nvm_out" level="1"/>
647    <field field_ref="growth_resp" grid_ref="grid_nvm_out" level="1"/>
648    <field field_ref="npp" grid_ref="grid_nvm_out" level="1"/>
649    <field field_ref="z0m" name="Z0m" long_name="Roughness height for momentum" level="1"/>
650    <field field_ref="z0h" name="Z0h" long_name="Roughness height for heat" level="1"/>
651    <field field_ref="roughheight" name="EffectHeight" long_name="Effective displacement height (h-d)" level="1"/>
652    <field field_ref="delsoilmoist" level="1"/>
653    <field field_ref="delintercept" level="1"/>
654    <field field_ref="delswe" level="1"/>
655    <field field_ref="vevapnu" name="ESoil" level="1"/>
656    <field field_ref="vevapflo" name="EWater" level="1"/>
657    <field field_ref="temp_air" name="Tair" level="2"/>
658    <field field_ref="qair" name="Qair" level="2"/>
659    <field field_ref="vegetfrac" grid_ref="grid_nvm_out" level="3"/>
660    <field field_ref="maxvegetfrac" grid_ref="grid_nvm_out" level="3"/>
661    <field field_ref="nobiofrac" grid_ref="grid_nnobio_out" level="3"/>
662    <field field_ref="soilmoist" grid_ref="grid_nslm_out" level="7"/>
663    <field field_ref="humtot" name="RootMoist" long_name="Root zone soil water" level="1"/>
664    <field field_ref="ptn" grid_ref="grid_ngrnd_out" name="SoilTemp" level="7"/>
665    <field field_ref="vbeta1" name="SnowFrac" level="7"/>
666    <field field_ref="albedo_snow" level="7"/>
667    <field field_ref="snowdz" grid_ref="grid_nsnow_out" name="SnowDepth" level="7"/>
668    <field field_ref="temp_sol_new" name="RadT" level="1"/>
669    <field field_ref="twbr" level="1"/>
670   </field_group>
671  </file>
672
673  <!-- Sechiba alma file 2 -->
674  <file id="sechiba2_alma" name="sechiba_out_2_alma" output_level="10" output_freq="1d" enabled=".FALSE.">
675   <field_group group_ref="remap_1d" grid_ref="grid_landpoints_out" >
676    <field field_ref="areas" level="1"/>
677    <field field_ref="LandPoints" level="20"/>
678    <field field_ref="contfrac" level="1"/>
679    <field field_ref="soilflx" level="1"/>
680    <field field_ref="Qv" level="1"/>
681    <field field_ref="runoff" name="Qs" level="1"/>
682    <field field_ref="drainage" name="Qsb" level="1"/>
683    <field field_ref="coastalflow" name="CoastalFlow" level="1"/>
684    <field field_ref="riverflow" name="RiverFlow" level="1"/>
685    <field field_ref="surfheat_incr" level="1"/>
686    <field field_ref="coldcont_incr" level="1"/>
687    <field field_ref="fluxsens" name="Qh" level="1"/>
688    <field field_ref="fluxlat" name="Qle" level="1"/>
689    <field field_ref="lwnet" name="LWnet" level="1"/>
690    <field field_ref="swnet" name="SWnet" level="1"/>
691    <field field_ref="precip_rain" name="Rainf" level="1"/>
692    <field field_ref="precip_snow" name="Snowf" level="1"/>
693    <field field_ref="vevapp" name="Evap" level="1"/>
694    <field field_ref="tot_melt" name="Qsm" level="1"/>
695    <field field_ref="irrigation" name="Qirrig" level="1"/>
696    <field field_ref="netirrig" name="Qirrig_req" long_name="Irrigation requirement" level="1"/>
697    <field field_ref="temp_sol_new" level="1"/>
698    <field field_ref="fastr" level="1"/>
699    <field field_ref="slowr" level="1"/>
700    <field field_ref="streamr" level="1"/>
701    <field field_ref="laker" level="1"/>
702    <field field_ref="pondr" level="1"/>
703    <field field_ref="albedo_glob" level="1"/>
704    <field field_ref="SurfStor" level="1"/>
705    <field field_ref="snow" name="SWE" long_name="Snow Water Equivalent" level="1"/>
706    <field field_ref="soilwet" level="1"/>
707    <field field_ref="ECanop" level="1"/>
708    <field field_ref="TVeg" level="1"/>
709    <field field_ref="vevapsno" name="SubSnow" level="1"/>
710    <field field_ref="irrigmap" name="IrrigationMap" level="1"/>
711    <field field_ref="floodmap" name="FloodplainsMap" level="1"/>
712    <field field_ref="flood_frac" name="flood_frac" level="1"/>
713    <field field_ref="swampmap" name="SwampMap" level="1"/>
714    <field field_ref="hydrographs" name="Dis" level="1"/>
715    <field field_ref="gpp" grid_ref="grid_nvm_out" name="GPP" level="1"/>
716    <field field_ref="nee" grid_ref="grid_nvm_out" name="NEE" level="1"/>
717    <field field_ref="maint_resp" grid_ref="grid_nvm_out" level="1"/>
718    <field field_ref="hetero_resp" grid_ref="grid_nvm_out" level="1"/>
719    <field field_ref="growth_resp" grid_ref="grid_nvm_out" level="1"/>
720    <field field_ref="npp" grid_ref="grid_nvm_out" level="1"/>
721    <field field_ref="delsoilmoist" level="1"/>
722    <field field_ref="delintercept" level="1"/>
723    <field field_ref="delswe" level="1"/>
724    <field field_ref="vevapnu" name="ESoil" level="1"/>
725    <field field_ref="vevapflo" name="EWater" level="1"/>
726    <field field_ref="soilmoist" grid_ref="grid_nslm_out" level="7"/>
727    <field field_ref="humtot" name="RootMoist" long_name="Root zone soil water" level="1"/>
728    <field field_ref="ptn" grid_ref="grid_ngrnd_out" name="SoilTemp" level="7"/>
729    <field field_ref="vbeta1" name="SnowFrac" level="7"/>
730    <field field_ref="albedo_snow" level="7"/>
731    <field field_ref="snowdz" grid_ref="grid_nsnow_out" name="SnowDepth" level="7"/>
732    <field field_ref="vegetfrac" grid_ref="grid_nvm_out" level="3"/>
733    <field field_ref="maxvegetfrac" grid_ref="grid_nvm_out" level="3"/>
734    <field field_ref="nobiofrac" grid_ref="grid_nnobio_out" level="3"/>
735    <field field_ref="temp_sol_new" name="RadT" level="5"/>
736   </field_group>
737
738  </file>
739
740  <!-- Sechiba file 4 containing variables read and interpolated from input files -->
741  <file id="sechiba4" name="sechiba_interp_diag" output_level="1" output_freq="1d" enabled=".TRUE.">
742    <field_group group_ref="remap_1d" grid_ref="grid_landpoints_out" >
743
744      <field field_ref="interp_diag_veget_next" grid_ref="grid_nvm_out" level="1"/>
745      <field field_ref="interp_diag_njsc" level="1"/>
746      <field field_ref="interp_diag_clayfraction"  level="1"/>
747      <field field_ref="interp_diag_sandfraction"  level="1"/>
748      <field field_ref="interp_diag_siltfraction"  level="1"/>
749      <field field_ref="interp_diag_reinf_slope"  level="1"/>
750      <field field_ref="interp_diag_alb_vis"  level="1"/>
751      <field field_ref="interp_diag_alb_nir"  level="1"/>
752      <field field_ref="interp_diag_N_qt_WRICE_year" level="1"/>
753      <field field_ref="interp_diag_N_qt_OTHER_year" level="1"/>
754      <field field_ref="interp_diag_flx_co2_bbg_year" level="1"/>
755      <field field_ref="interp_diag_reftemp" level="1"/>
756      <field field_ref="interp_diag_woodharvest" level="1"/>
757      <!--      <field field_ref="interp_diag_lai" grid_ref="grid_from_lai" level="1"/> -->
758     
759      <field field_ref="interp_avail_aveget"  level="3"/>
760      <field field_ref="interp_diag_vegetrefrac" grid_ref="grid_nvm_out" level="3"/>
761      <field field_ref="interp_avail_atext"  level="3"/>
762      <field field_ref="interp_diag_soilclass" grid_ref="grid_nscm_out" level="3"/>
763      <field field_ref="interp_avail_aslope"  level="3"/>     
764      <field field_ref="interp_avail_aalb_bg"  level="3"/>
765      <field field_ref="interp_avail_asoilcol"  level="3"/>
766      <field field_ref="interp_avail_achem_wrice" level="3"/>
767      <field field_ref="interp_avail_achem_other" level="3"/>
768      <field field_ref="interp_avail_achem_co2" level="3"/>
769      <field field_ref="interp_avail_alaimap"  level="3"/>
770      <field field_ref="interp_avail_areftemp" level="3"/>
771     
772   </field_group>
773  </file>
774
775
776  <!-- Definition of files with stomate diagnostics -->
777  <!-- Stomate file 1 -->
778  <file id="stomate1" name="stomate_history" output_level="1" output_freq="1d" type="one_file" enabled=".FALSE.">
779   <field_group group_ref="remap_1mo" grid_ref="grid_landpoints_out" >
780     
781    <!-- level 1 -->
782    <field field_ref="RESOLUTION_X" level="0"/>
783    <field field_ref="RESOLUTION_Y" level="0"/>
784    <field field_ref="CONTFRAC_STOMATE" level="0"/>
785    <field field_ref="areas" level="0"/>
786    <field field_ref="T2M_MONTH" level="1"/>
787    <field field_ref="T2M_WEEK" level="1"/>
788    <field field_ref="firefrac" grid_ref="grid_nvm_out" level="1"/>
789    <field field_ref="CO2_FIRE" grid_ref="grid_nvm_out" level="1"/>
790    <field field_ref="CO2_TAKEN" grid_ref="grid_nvm_out" level="1"/>
791    <field field_ref="LAI" grid_ref="grid_nvm_out" level="1"/>
792    <field field_ref="VEGET_COV_MAX" grid_ref="grid_nvm_out" level="0"/>
793    <field field_ref="NPP_STOMATE" grid_ref="grid_nvm_out" level="0"/>
794    <field field_ref="GPP" grid_ref="grid_nvm_out" level="0"/>
795    <!-- level 2 -->
796    <field field_ref="LEAF_M" grid_ref="grid_nvm_out" level="2"/>
797    <field field_ref="SAP_M_AB" grid_ref="grid_nvm_out" level="2"/>
798    <field field_ref="SAP_M_BE" grid_ref="grid_nvm_out" level="2"/>
799    <field field_ref="HEART_M_AB" grid_ref="grid_nvm_out" level="2"/>
800    <field field_ref="HEART_M_BE" grid_ref="grid_nvm_out" level="2"/>
801    <field field_ref="ROOT_M" grid_ref="grid_nvm_out" level="2"/>
802    <field field_ref="FRUIT_M" grid_ref="grid_nvm_out" level="2"/>
803    <field field_ref="RESERVE_M" grid_ref="grid_nvm_out" level="2"/>
804    <field field_ref="MAINT_RESP" grid_ref="grid_nvm_out" level="0"/>
805    <field field_ref="GROWTH_RESP" grid_ref="grid_nvm_out" level="0"/>
806    <!-- level 3 -->
807    <field field_ref="IND" grid_ref="grid_nvm_out" level="3"/>
808    <field field_ref="ADAPTATION" grid_ref="grid_nvm_out" level="3"/>
809    <field field_ref="REGENERATION" grid_ref="grid_nvm_out" level="3"/>
810    <field field_ref="CN_IND" grid_ref="grid_nvm_out" level="3"/>
811    <field field_ref="WOODMASS_IND" grid_ref="grid_nvm_out" level="3"/>
812    <field field_ref="MOISTRESS" grid_ref="grid_nvm_out" level="3"/>
813    <field field_ref="HET_RESP" grid_ref="grid_nvm_out" level="0"/>
814    <!-- level 4 -->
815    <field field_ref="SAP_AB_TURN" grid_ref="grid_nvm_out" level="4"/>
816    <field field_ref="ROOT_TURN" grid_ref="grid_nvm_out" level="4"/>
817    <field field_ref="FRUIT_TURN" grid_ref="grid_nvm_out" level="4"/>
818    <field field_ref="TOTAL_BM_LITTER" grid_ref="grid_nvm_out" level="0"/>
819    <field field_ref="LEAF_BM_LITTER" grid_ref="grid_nvm_out" level="4"/>
820    <field field_ref="SAP_AB_BM_LITTER" grid_ref="grid_nvm_out" level="4"/>
821    <field field_ref="SAP_BE_BM_LITTER" grid_ref="grid_nvm_out" level="4"/>
822    <field field_ref="HEART_AB_BM_LITTER" grid_ref="grid_nvm_out" level="4"/>
823    <field field_ref="HEART_BE_BM_LITTER" grid_ref="grid_nvm_out" level="4"/>
824    <field field_ref="ROOT_BM_LITTER" grid_ref="grid_nvm_out" level="4"/>
825    <field field_ref="FRUIT_BM_LITTER" grid_ref="grid_nvm_out" level="4"/>
826    <field field_ref="RESERVE_BM_LITTER" grid_ref="grid_nvm_out" level="4"/>
827    <field field_ref="TOTAL_M" grid_ref="grid_nvm_out" level="0"/>
828    <field field_ref="TOTAL_TURN" grid_ref="grid_nvm_out" level="4"/>
829    <field field_ref="LEAF_TURN" grid_ref="grid_nvm_out" level="4"/>
830    <!-- level 5 -->
831    <field field_ref="LITTER_STR_AB" grid_ref="grid_nvm_out" level="5"/>
832    <field field_ref="LITTER_MET_AB" grid_ref="grid_nvm_out" level="5"/>
833    <field field_ref="LITTER_STR_BE" grid_ref="grid_nvm_out" level="5"/>
834    <field field_ref="LITTER_MET_BE" grid_ref="grid_nvm_out" level="5"/>
835    <field field_ref="DEADLEAF_COVER" level="5"/>
836    <field field_ref="TOTAL_SOIL_CARB" grid_ref="grid_nvm_out" level="0"/>
837    <field field_ref="CARBON_ACTIVE" grid_ref="grid_nvm_out" level="5"/>
838    <field field_ref="CARBON_SLOW" grid_ref="grid_nvm_out" level="5"/>
839    <field field_ref="CARBON_PASSIVE" grid_ref="grid_nvm_out" level="5"/>
840    <field field_ref="LITTERHUM" level="5"/>
841    <field field_ref="BM_ALLOC_LEAF" grid_ref="grid_nvm_out" level="5"/>
842    <field field_ref="BM_ALLOC_SAP_AB" grid_ref="grid_nvm_out" level="5"/>
843    <field field_ref="BM_ALLOC_SAP_BE" grid_ref="grid_nvm_out" level="5"/>
844    <field field_ref="BM_ALLOC_ROOT" grid_ref="grid_nvm_out" level="5"/>
845    <field field_ref="BM_ALLOC_FRUIT" grid_ref="grid_nvm_out" level="5"/>
846    <field field_ref="BM_ALLOC_RES" grid_ref="grid_nvm_out" level="5"/>
847    <field field_ref="HERBIVORES" grid_ref="grid_nvm_out" level="5"/>
848    <field field_ref="TURNOVER_TIME" grid_ref="grid_nvm_out" level="5"/>
849    <field field_ref="PROD10" grid_ref="grid_P11_out" level="5"/>
850    <field field_ref="FLUX10" grid_ref="grid_P10_out" level="5"/>
851    <field field_ref="PROD100" grid_ref="grid_P101_out" level="5"/>
852    <field field_ref="FLUX100" grid_ref="grid_P100_out" level="5"/>
853    <field field_ref="CONVFLUX" level="0"/>
854    <field field_ref="CFLUX_PROD10" level="0"/>
855    <field field_ref="CFLUX_PROD100" level="0"/>
856    <field field_ref="fDeforestToProduct" level="5"/>
857    <field field_ref="fDeforestToProduct_post" level="5"/>
858    <field field_ref="PROD10_HARVEST" grid_ref="grid_P11_out" level="5"/>
859    <field field_ref="FLUX10_HARVEST" grid_ref="grid_P10_out" level="5"/>
860    <field field_ref="PROD100_HARVEST" grid_ref="grid_P101_out" level="5"/>
861    <field field_ref="FLUX100_HARVEST" grid_ref="grid_P100_out" level="5"/>
862    <field field_ref="CONVFLUX_HARVEST" level="5"/>
863    <field field_ref="CFLUX_PROD10_HARVEST" level="5"/>
864    <field field_ref="CFLUX_PROD100_HARVEST" level="5"/>
865    <field field_ref="WOOD_HARVEST" level="0"/>
866    <field field_ref="WOOD_HARVEST_PFT" grid_ref="grid_nvm_out" level="0"/>
867    <field field_ref="HARVEST_ABOVE" level="0"/>
868    <!-- level 6 -->
869    <field field_ref="VCMAX" grid_ref="grid_nvm_out" level="6"/>
870    <field field_ref="LEAF_AGE" grid_ref="grid_nvm_out" level="6"/>
871    <field field_ref="mortality" grid_ref="grid_nvm_out" level="6"/>
872    <field field_ref="firedeath" grid_ref="grid_nvm_out" level="6"/>
873    <field field_ref="IND_ESTAB" grid_ref="grid_nvm_out" level="6"/>
874    <field field_ref="ESTABTREE" level="6"/>
875    <field field_ref="ESTABGRASS" level="6"/>
876    <field field_ref="light_death" grid_ref="grid_nvm_out" level="6"/>
877    <!-- level 7 -->
878    <field field_ref="AGE" grid_ref="grid_nvm_out" level="7"/>
879    <field field_ref="HEIGHT" grid_ref="grid_nvm_out" level="7"/>
880    <!-- level 9 -->
881    <field field_ref="WHEN_GROWTHINIT" grid_ref="grid_nvm_out" level="9"/>
882    <field field_ref="PFTPRESENT" grid_ref="grid_nvm_out" level="9"/>
883    <field field_ref="GDD_MIDWINTER" grid_ref="grid_nvm_out" level="9"/>
884    <field field_ref="GDD_M5_DORMANCE" grid_ref="grid_nvm_out" level="9"/>
885    <field field_ref="NCD_DORMANCE" grid_ref="grid_nvm_out" level="9"/>
886    <field field_ref="ALLOW_INITPHENO" grid_ref="grid_nvm_out" level="9"/>
887    <field field_ref="BEGIN_LEAVES" grid_ref="grid_nvm_out" level="9"/>
888    <field field_ref="t2m_longterm" level="9"/>
889    <field field_ref="TSEASON"  level="9"/>
890    <field field_ref="TMIN_SPRING_TIME" grid_ref="grid_nvm_out" level="9"/>
891    <field field_ref="ONSET_DATE" grid_ref="grid_nvm_out" level="9"/>
892    <field field_ref="FPC_MAX" grid_ref="grid_nvm_out" level="9"/>
893    <field field_ref="MAXFPC_LASTYEAR" grid_ref="grid_nvm_out" level="9"/>
894    <field field_ref="clitterlut" grid_ref="grid_nlut_out" level="9"/>
895    <field field_ref="csoillut" grid_ref="grid_nlut_out" level="9"/>
896    <field field_ref="cveglut" grid_ref="grid_nlut_out" level="9"/>
897    <field field_ref="lailut" grid_ref="grid_nlut_out" level="9"/>
898    <field field_ref="ctotfirelut" grid_ref="grid_nlut_out" level="9"/>
899    <field field_ref="ralut" grid_ref="grid_nlut_out" level="9"/>
900    <field field_ref="rhlut" grid_ref="grid_nlut_out" level="9"/>
901    <field field_ref="npplut" grid_ref="grid_nlut_out" level="9"/>
902    <field field_ref="cproductlut" grid_ref="grid_nlut_out" level="9"/>
903    <field field_ref="flulccproductlut" grid_ref="grid_nlut_out" level="9"/>
904    <field field_ref="flulccresiduelut" grid_ref="grid_nlut_out" level="9"/>
905    <field field_ref="flulccresidue" grid_ref="grid_nvm_out" level="9"/>
906    <field field_ref="flulccatmlut" grid_ref="grid_nlut_out" level="9"/>
907    <field field_ref="necbLut" grid_ref="grid_nlut_out" level="9"/>
908    <field field_ref="fProductDecomp" level="9"/>
909
910    <!-- level 10 -->
911    <field field_ref="FIREINDEX" grid_ref="grid_nvm_out" level="10"/>
912    <field field_ref="HET_RESP_SOIL" grid_ref="grid_nvm_out" level="10"/>
913    <field field_ref="HET_RESP_LITTER" grid_ref="grid_nvm_out" level="10"/>
914 
915   </field_group> 
916   
917  </file>
918
919  <!-- Stomate file 2 -->
920  <file id="stomate2" name="stomate_ipcc_history" output_level="1" output_freq="1d" type="one_file" enabled=".FALSE.">
921   <field_group group_ref="remap_1mo" grid_ref="grid_landpoints_out" >
922    <!-- level 1 -->
923    <field field_ref="RESOLUTION_X" level="1"/>
924    <field field_ref="RESOLUTION_Y" level="1"/>
925    <field field_ref="CONTFRAC_STOMATE" level="0"/>
926    <field field_ref="areas" level="0"/>
927    <field field_ref="cVeg" level="1"/>
928    <field field_ref="cVegGrass" level="1"/>
929    <field field_ref="cVegCrop" level="0"/>
930    <field field_ref="cVegTree" level="1"/>
931    <field field_ref="cLitter" level="1"/>
932    <field field_ref="cLitterGrass" level="1"/>
933    <field field_ref="cLitterCrop" level="0"/>
934    <field field_ref="cLitterTree" level="1"/>
935    <field field_ref="cOther" level="1"/>
936    <field field_ref="cSoil" level="1"/>
937    <field field_ref="cSoilGrass" level="1"/>
938    <field field_ref="cSoilCrop" level="0"/>
939    <field field_ref="cSoilTree" level="1"/>
940    <field field_ref="cLand" level="1"/>
941    <field field_ref="cProduct" level="0"/>
942    <field field_ref="cMassVariation" level="0"/>
943    <field field_ref="lai_ipcc" level="0"/>
944    <field field_ref="gpp_ipcc" level="0"/>
945    <field field_ref="ra" level="0"/>
946    <field field_ref="raGrass" level="1"/>
947    <field field_ref="raCrop" level="0"/>
948    <field field_ref="raTree" level="1"/>
949    <field field_ref="npp_ipcc" level="1"/>
950    <field field_ref="rh" level="1"/>
951    <field field_ref="rhSoil" level="1"/>
952    <field field_ref="rhLitter" level="1"/>
953    <field field_ref="resp_maint_part_weighted" grid_ref="grid_nparts_out" level="1"/>
954    <field field_ref="resp_growth_part_weighted" grid_ref="grid_nparts_out" level="1"/>
955    <field field_ref="tSoilPools" grid_ref="grid_ncarb_out" level="1"/>
956    <field field_ref="fFire" level="1"/>
957    <field field_ref="fHarvest" level="1"/>
958    <field field_ref="fWoodharvest" level="0"/>
959    <field field_ref="fLuc" level="0"/>
960    <field field_ref="fAnthDisturb" level="1"/>
961    <field field_ref="nbp" level="0"/>
962    <field field_ref="fVegLitter" level="0"/>
963    <field field_ref="fLitterSoil" level="0"/>
964    <field field_ref="cLeaf" level="0"/>
965    <field field_ref="cWood" level="0"/>
966    <field field_ref="cStem" level="1"/>
967    <field field_ref="cRoot" level="0"/>
968    <field field_ref="cMisc" level="0"/>
969    <field field_ref="cLitterAbove" level="0"/>
970    <field field_ref="cLitterBelow" level="0"/>
971    <field field_ref="cSoilFast" level="0"/>
972    <field field_ref="cSoilMedium" level="0"/>
973    <field field_ref="cSoilSlow" level="0"/>
974    <field field_ref="cSoilPools" grid_ref="grid_ncarb_out" level="1"/>
975    <field field_ref="landCoverFrac" grid_ref="grid_nvm_out" level="1"/>
976    <field field_ref="treeFracPrimDec" level="0"/>
977    <field field_ref="treeFracPrimEver" level="0"/>
978    <field field_ref="c3PftFrac" level="0"/>
979    <field field_ref="c4PftFrac" level="0"/>
980    <field field_ref="rGrowth" level="0"/>
981    <field field_ref="rMaint" level="0"/>
982    <field field_ref="rGrowth_ipcc" level="1"/>
983    <field field_ref="rMaint_ipcc" level="1"/>
984    <field field_ref="nppLeaf" level="0"/>
985    <field field_ref="nppWood" level="0"/>
986    <field field_ref="nppStem" level="1"/>
987    <field field_ref="nppRoot" level="0"/>
988    <field field_ref="nppGrass" level="1"/>
989    <field field_ref="nppCrop" level="0"/>
990    <field field_ref="nppTree" level="1"/>
991    <field field_ref="nppOther" level="1"/>
992    <field field_ref="nep" level="0"/>
993   </field_group>
994   
995  </file>
996</file_definition>
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